View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6289_low_26 (Length: 250)
Name: NF6289_low_26
Description: NF6289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6289_low_26 |
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Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 102 - 240
Target Start/End: Complemental strand, 34150503 - 34150365
Alignment:
| Q |
102 |
tttcactcatataataaaaaagagaaaatttatattttacatattgtatctaatatcctttaactttcttttagtgtagttgttttactccattcatcta |
201 |
Q |
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| T |
34150503 |
tttcactcatataataaaaaagagaaaatttatattttacatattgtatctaatatcctttaactttcttttagtgtagttgttttactccattcatctc |
34150404 |
T |
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| Q |
202 |
tatttataagaaccatttcaccttttatttgtccctatg |
240 |
Q |
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| T |
34150403 |
tatttataagaaccatttcaccttttatttgtccctatg |
34150365 |
T |
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