View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6290_high_23 (Length: 302)

Name: NF6290_high_23
Description: NF6290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6290_high_23
NF6290_high_23
[»] chr6 (47 HSPs)
chr6 (80-174)||(22778631-22778725)
chr6 (80-174)||(22764382-22764476)
chr6 (80-174)||(25506040-25506134)
chr6 (80-174)||(19714146-19714240)
chr6 (80-174)||(19899414-19899508)
chr6 (80-173)||(26896909-26897002)
chr6 (80-174)||(19720302-19720396)
chr6 (80-174)||(22232119-22232213)
chr6 (80-154)||(12667066-12667140)
chr6 (80-174)||(20452159-20452253)
chr6 (80-174)||(28702398-28702492)
chr6 (82-174)||(30824036-30824129)
chr6 (82-174)||(35091176-35091269)
chr6 (82-174)||(3917102-3917198)
chr6 (89-170)||(10984589-10984670)
chr6 (80-174)||(20458976-20459070)
chr6 (80-174)||(18909546-18909638)
chr6 (239-293)||(10984450-10984504)
chr6 (115-174)||(29600943-29601002)
chr6 (251-293)||(25505919-25505961)
chr6 (250-295)||(22778511-22778556)
chr6 (244-293)||(26897074-26897122)
chr6 (101-174)||(28002323-28002396)
chr6 (253-293)||(28702292-28702332)
chr6 (244-280)||(30823913-30823949)
chr6 (244-279)||(12666942-12666977)
chr6 (251-293)||(20452039-20452081)
chr6 (251-293)||(20458856-20458898)
chr6 (43-84)||(844310-844351)
chr6 (43-84)||(10915506-10915547)
chr6 (251-292)||(12663257-12663298)
chr6 (250-295)||(22764262-22764307)
chr6 (43-84)||(26356734-26356775)
chr6 (43-84)||(30660982-30661023)
chr6 (244-279)||(22232012-22232047)
chr6 (43-77)||(15721115-15721149)
chr6 (46-84)||(17697440-17697478)
chr6 (43-77)||(20977573-20977607)
chr6 (44-82)||(33744714-33744752)
chr6 (43-84)||(5079558-5079599)
chr6 (43-84)||(5087241-5087282)
chr6 (43-84)||(5974360-5974401)
chr6 (43-84)||(8710038-8710079)
chr6 (43-84)||(12481958-12481999)
chr6 (251-288)||(29600829-29600866)
chr6 (43-84)||(30492912-30492953)
chr6 (244-280)||(35091070-35091106)
[»] chr2 (36 HSPs)
chr2 (80-174)||(17795-17889)
chr2 (82-174)||(42565446-42565538)
chr2 (82-174)||(42574070-42574162)
chr2 (80-174)||(24690554-24690648)
chr2 (80-174)||(36735784-36735878)
chr2 (80-174)||(38084031-38084125)
chr2 (82-174)||(15944055-15944147)
chr2 (82-174)||(15952570-15952662)
chr2 (82-174)||(35139069-35139161)
chr2 (82-174)||(35147405-35147497)
chr2 (80-174)||(5870618-5870712)
chr2 (80-174)||(5873760-5873854)
chr2 (80-174)||(11874156-11874250)
chr2 (80-174)||(19883947-19884040)
chr2 (82-174)||(41233340-41233433)
chr2 (80-174)||(18500692-18500780)
chr2 (92-174)||(18972610-18972690)
chr2 (244-293)||(17661-17710)
chr2 (251-293)||(15952449-15952491)
chr2 (251-293)||(35139240-35139282)
chr2 (251-293)||(35147576-35147618)
chr2 (251-293)||(42565325-42565367)
chr2 (251-293)||(42573949-42573991)
chr2 (253-293)||(24690714-24690754)
chr2 (244-279)||(15943934-15943969)
chr2 (42-84)||(25666241-25666283)
chr2 (43-84)||(10357518-10357559)
chr2 (43-84)||(13372046-13372087)
chr2 (253-295)||(18972503-18972544)
chr2 (42-84)||(31436240-31436282)
chr2 (42-84)||(33832174-33832216)
chr2 (43-84)||(7439423-7439464)
chr2 (43-84)||(18672394-18672435)
chr2 (43-84)||(25100788-25100829)
chr2 (43-83)||(3043412-3043452)
chr2 (44-84)||(31771519-31771559)
[»] scaffold0039 (2 HSPs)
scaffold0039 (80-174)||(89380-89474)
scaffold0039 (251-279)||(89273-89301)
[»] scaffold0016 (2 HSPs)
scaffold0016 (80-174)||(14563-14657)
scaffold0016 (244-293)||(14742-14791)
[»] chr5 (52 HSPs)
chr5 (80-174)||(20099156-20099250)
chr5 (80-174)||(23377808-23377902)
chr5 (80-174)||(25526645-25526739)
chr5 (80-174)||(25533327-25533421)
chr5 (80-174)||(36448709-36448803)
chr5 (80-174)||(36455093-36455187)
chr5 (80-174)||(15956505-15956599)
chr5 (80-174)||(20092279-20092373)
chr5 (80-173)||(26186158-26186251)
chr5 (82-174)||(28844396-28844488)
chr5 (82-174)||(28853006-28853098)
chr5 (78-170)||(40015354-40015446)
chr5 (80-174)||(20639372-20639466)
chr5 (80-174)||(30249779-30249873)
chr5 (80-174)||(25041776-25041870)
chr5 (90-174)||(10058248-10058333)
chr5 (81-174)||(24956347-24956440)
chr5 (82-174)||(43597561-43597654)
chr5 (82-174)||(43630355-43630448)
chr5 (82-174)||(24964807-24964899)
chr5 (80-174)||(37048822-37048916)
chr5 (82-174)||(1727674-1727767)
chr5 (82-173)||(23349590-23349682)
chr5 (244-293)||(23377674-23377723)
chr5 (244-293)||(24956227-24956276)
chr5 (244-293)||(24964687-24964736)
chr5 (251-293)||(28844567-28844609)
chr5 (251-293)||(28853177-28853219)
chr5 (252-293)||(40015560-40015601)
chr5 (244-280)||(1727551-1727587)
chr5 (244-280)||(43597439-43597475)
chr5 (244-280)||(43630233-43630269)
chr5 (244-279)||(20099036-20099071)
chr5 (251-293)||(23349467-23349509)
chr5 (90-174)||(38227452-38227535)
chr5 (43-84)||(8337046-8337087)
chr5 (43-84)||(9924444-9924485)
chr5 (43-84)||(10463940-10463981)
chr5 (43-84)||(37103235-37103276)
chr5 (253-293)||(25041670-25041710)
chr5 (255-295)||(30249941-30249980)
chr5 (251-290)||(20639254-20639293)
chr5 (43-77)||(6365348-6365382)
chr5 (45-83)||(8313412-8313450)
chr5 (43-84)||(1683216-1683257)
chr5 (43-84)||(24636990-24637031)
chr5 (253-290)||(26186054-26186091)
chr5 (43-76)||(27308030-27308063)
chr5 (43-84)||(34785301-34785342)
chr5 (43-84)||(38693517-38693558)
chr5 (244-279)||(10058403-10058439)
chr5 (44-84)||(21837142-21837182)
[»] chr4 (29 HSPs)
chr4 (80-174)||(19737520-19737614)
chr4 (80-174)||(20548836-20548930)
chr4 (80-174)||(50188250-50188344)
chr4 (80-174)||(55792744-55792838)
chr4 (80-174)||(3381951-3382045)
chr4 (80-174)||(8657955-8658049)
chr4 (80-174)||(3388697-3388791)
chr4 (80-174)||(39744937-39745031)
chr4 (82-174)||(8093790-8093883)
chr4 (82-174)||(8102595-8102688)
chr4 (80-173)||(38853819-38853912)
chr4 (101-174)||(8817024-8817097)
chr4 (244-295)||(50188415-50188466)
chr4 (80-167)||(18482899-18482985)
chr4 (244-280)||(8093668-8093704)
chr4 (244-280)||(8102473-8102509)
chr4 (43-93)||(28448442-28448492)
chr4 (43-84)||(3873203-3873244)
chr4 (244-293)||(8816905-8816953)
chr4 (43-84)||(19522915-19522956)
chr4 (43-84)||(47379227-47379268)
chr4 (43-84)||(53323978-53324019)
chr4 (43-84)||(53423614-53423655)
chr4 (44-84)||(30331330-30331370)
chr4 (44-82)||(44289883-44289921)
chr4 (43-84)||(31316744-31316785)
chr4 (43-84)||(33177472-33177513)
chr4 (43-84)||(43938206-43938247)
chr4 (43-84)||(47309637-47309678)
[»] chr3 (50 HSPs)
chr3 (80-174)||(4313104-4313198)
chr3 (80-174)||(8606618-8606712)
chr3 (80-174)||(13105152-13105246)
chr3 (80-174)||(23287640-23287734)
chr3 (83-174)||(13111309-13111400)
chr3 (80-174)||(68611-68705)
chr3 (80-174)||(74704-74798)
chr3 (80-174)||(8613079-8613173)
chr3 (80-174)||(9524928-9525022)
chr3 (80-174)||(9554604-9554698)
chr3 (80-174)||(14880824-14880918)
chr3 (80-174)||(14892639-14892733)
chr3 (80-174)||(17934530-17934624)
chr3 (80-174)||(48060242-48060336)
chr3 (80-174)||(14887541-14887635)
chr3 (80-174)||(21638071-21638165)
chr3 (80-174)||(37468484-37468578)
chr3 (82-174)||(8154154-8154247)
chr3 (80-172)||(261815-261907)
chr3 (80-170)||(26386224-26386314)
chr3 (82-174)||(41015813-41015906)
chr3 (80-174)||(11181227-11181319)
chr3 (82-174)||(41007033-41007127)
chr3 (80-174)||(16030828-16030922)
chr3 (80-174)||(16815364-16815454)
chr3 (83-151)||(35491496-35491564)
chr3 (247-293)||(14887194-14887240)
chr3 (251-293)||(68784-68826)
chr3 (251-293)||(74877-74919)
chr3 (251-293)||(23287519-23287561)
chr3 (90-164)||(44363049-44363123)
chr3 (244-293)||(9524793-9524842)
chr3 (244-293)||(9554468-9554517)
chr3 (125-174)||(12558353-12558402)
chr3 (249-293)||(48060122-48060166)
chr3 (43-84)||(25250217-25250258)
chr3 (244-279)||(17934708-17934743)
chr3 (251-293)||(14880703-14880745)
chr3 (251-293)||(14892518-14892560)
chr3 (44-82)||(39562601-39562639)
chr3 (251-293)||(44362918-44362960)
chr3 (46-84)||(45406866-45406904)
chr3 (44-82)||(46295258-46295296)
chr3 (244-293)||(11181405-11181453)
chr3 (43-84)||(21749769-21749810)
chr3 (43-84)||(37179145-37179186)
chr3 (43-84)||(45419836-45419877)
chr3 (44-84)||(11293997-11294037)
chr3 (253-293)||(26386113-26386153)
chr3 (44-84)||(38174105-38174145)
[»] scaffold0027 (1 HSPs)
scaffold0027 (78-174)||(24046-24142)
[»] chr8 (31 HSPs)
chr8 (80-174)||(32007195-32007289)
chr8 (82-174)||(39845122-39845214)
chr8 (80-174)||(22162499-22162592)
chr8 (82-174)||(39837080-39837172)
chr8 (83-174)||(32000229-32000320)
chr8 (80-174)||(22156496-22156589)
chr8 (80-174)||(25858778-25858872)
chr8 (80-174)||(32025161-32025255)
chr8 (82-174)||(30938758-30938851)
chr8 (80-143)||(25852562-25852625)
chr8 (90-170)||(13386096-13386176)
chr8 (251-293)||(39836959-39837001)
chr8 (251-293)||(39845001-39845043)
chr8 (43-84)||(6590467-6590508)
chr8 (43-84)||(42499429-42499470)
chr8 (44-82)||(5765766-5765804)
chr8 (44-82)||(28755225-28755263)
chr8 (46-84)||(36470877-36470915)
chr8 (43-84)||(5695962-5696003)
chr8 (43-84)||(6018240-6018281)
chr8 (101-174)||(21640609-21640681)
chr8 (43-84)||(23483545-23483586)
chr8 (43-84)||(24451685-24451726)
chr8 (43-84)||(27875496-27875537)
chr8 (43-84)||(28015677-28015718)
chr8 (43-84)||(35863242-35863283)
chr8 (43-76)||(37967745-37967778)
chr8 (43-84)||(38706492-38706533)
chr8 (43-84)||(44265649-44265690)
chr8 (251-279)||(32000399-32000427)
chr8 (44-76)||(33322742-33322774)
[»] chr7 (37 HSPs)
chr7 (80-174)||(6851522-6851616)
chr7 (80-172)||(46461629-46461721)
chr7 (80-174)||(28415591-28415685)
chr7 (80-174)||(20542412-20542505)
chr7 (82-174)||(18303899-18303992)
chr7 (80-174)||(1858081-1858175)
chr7 (80-154)||(43005217-43005291)
chr7 (82-174)||(12978931-12979024)
chr7 (82-174)||(13831954-13832047)
chr7 (82-174)||(13839984-13840077)
chr7 (80-173)||(44412824-44412918)
chr7 (80-174)||(46299433-46299526)
chr7 (80-174)||(4831856-4831949)
chr7 (80-135)||(34138683-34138738)
chr7 (80-132)||(34132374-34132426)
chr7 (251-293)||(34138533-34138575)
chr7 (244-280)||(18303792-18303828)
chr7 (239-286)||(18156628-18156675)
chr7 (244-279)||(34132236-34132271)
chr7 (43-84)||(18059209-18059250)
chr7 (80-117)||(22347309-22347346)
chr7 (43-84)||(38159155-38159196)
chr7 (43-84)||(43597535-43597576)
chr7 (247-293)||(4831762-4831808)
chr7 (46-84)||(4926578-4926616)
chr7 (140-174)||(34138654-34138688)
chr7 (43-84)||(6331099-6331140)
chr7 (43-84)||(7238627-7238668)
chr7 (43-84)||(15130913-15130954)
chr7 (101-174)||(25831800-25831873)
chr7 (43-84)||(35482110-35482151)
chr7 (43-84)||(44081161-44081202)
chr7 (43-84)||(46044342-46044383)
chr7 (43-84)||(46331002-46331043)
chr7 (89-117)||(7528458-7528486)
chr7 (253-293)||(20542292-20542332)
chr7 (44-84)||(33624990-33625030)
[»] chr1 (24 HSPs)
chr1 (80-174)||(2416213-2416307)
chr1 (80-174)||(44832062-44832156)
chr1 (78-173)||(19367922-19368017)
chr1 (80-174)||(47108834-47108928)
chr1 (80-174)||(20429818-20429913)
chr1 (80-174)||(15473376-15473470)
chr1 (82-174)||(31540430-31540523)
chr1 (82-174)||(31548999-31549092)
chr1 (82-174)||(3432410-3432501)
chr1 (80-173)||(51968390-51968483)
chr1 (244-293)||(19368089-19368138)
chr1 (244-293)||(47110405-47110454)
chr1 (253-293)||(20429979-20430019)
chr1 (43-84)||(30719683-30719724)
chr1 (43-84)||(43504970-43505011)
chr1 (43-84)||(46517223-46517264)
chr1 (43-84)||(51561398-51561439)
chr1 (42-84)||(26020449-26020491)
chr1 (44-82)||(31400425-31400463)
chr1 (101-174)||(23191469-23191542)
chr1 (43-84)||(33708996-33709037)
chr1 (43-84)||(39681998-39682039)
chr1 (43-84)||(47008698-47008739)
chr1 (43-84)||(52493731-52493772)
[»] scaffold0096 (1 HSPs)
scaffold0096 (89-174)||(893-978)
[»] scaffold0031 (2 HSPs)
scaffold0031 (90-174)||(33233-33317)
scaffold0031 (244-295)||(33112-33162)
[»] scaffold0119 (1 HSPs)
scaffold0119 (80-174)||(39725-39818)
[»] scaffold0046 (1 HSPs)
scaffold0046 (80-174)||(86204-86298)
[»] scaffold0043 (2 HSPs)
scaffold0043 (80-174)||(32737-32831)
scaffold0043 (244-290)||(32620-32666)
[»] scaffold1699 (2 HSPs)
scaffold1699 (82-174)||(901-993)
scaffold1699 (244-279)||(780-815)
[»] scaffold0085 (3 HSPs)
scaffold0085 (80-152)||(7323-7395)
scaffold0085 (124-174)||(18257-18307)
scaffold0085 (253-293)||(18151-18191)
[»] scaffold0306 (1 HSPs)
scaffold0306 (80-174)||(16109-16204)
[»] scaffold0028 (1 HSPs)
scaffold0028 (80-174)||(66269-66364)
[»] scaffold0301 (2 HSPs)
scaffold0301 (80-174)||(9365-9459)
scaffold0301 (253-295)||(9525-9566)
[»] scaffold0351 (2 HSPs)
scaffold0351 (80-171)||(7125-7217)
scaffold0351 (251-293)||(6999-7041)
[»] scaffold0562 (1 HSPs)
scaffold0562 (43-84)||(4022-4063)
[»] scaffold0001 (1 HSPs)
scaffold0001 (43-84)||(158078-158119)
[»] scaffold1160 (1 HSPs)
scaffold1160 (45-84)||(1363-1402)
[»] scaffold0514 (1 HSPs)
scaffold0514 (45-84)||(6227-6266)
[»] scaffold0640 (1 HSPs)
scaffold0640 (44-82)||(3944-3982)
[»] scaffold0651 (1 HSPs)
scaffold0651 (43-84)||(6913-6954)
[»] scaffold0445 (2 HSPs)
scaffold0445 (43-84)||(5968-6009)
scaffold0445 (12-44)||(5914-5946)
[»] scaffold0125 (1 HSPs)
scaffold0125 (43-84)||(21801-21842)
[»] scaffold0065 (1 HSPs)
scaffold0065 (109-174)||(43751-43815)
[»] scaffold0092 (1 HSPs)
scaffold0092 (248-280)||(14479-14511)


Alignment Details
Target: chr6 (Bit Score: 91; Significance: 4e-44; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 22778725 - 22778631
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22778725 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctattgagttgtcaaagaac 22778631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 22764476 - 22764382
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  22764476 aattttccatttttcatcaacctcctcacctataaatagagctctcattccacacaatttcagacaccaaaagttctattgagttgtcaaagaac 22764382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 25506134 - 25506040
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25506134 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 25506040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 19714146 - 19714240
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  19714146 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 19714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 19899414 - 19899508
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  19899414 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 19899508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 26896909 - 26897002
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaa 173  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||    
T  26896909 aattttccatttttcatcaacctcctcaccaataaatagagccctcattccacacaatttcaaacaccaaaagttctcttgagttgtcaaagaa 26897002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 19720302 - 19720396
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  19720302 aattttccttttttcatcaaactcctgacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagtagtcaaagaac 19720396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 22232213 - 22232119
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22232213 aattttccttttttcatcaacctctccacctataaatatagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 22232119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 12667140 - 12667066
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagtt 154  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12667140 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacatcaaaagtt 12667066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20452253 - 20452159
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||||| ||||    
T  20452253 aattttccttttttcatcaacttcctcacctataaatagagccatcattccacacaattacacacaccaaaagttctcttgagttgtcaatgaac 20452159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 28702492 - 28702398
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  28702492 aattttccttttttcatcaaactcctcacctataaatagagctcttattccacacaatttcacacacaaaaagttctcttgagttgtcaaagaac 28702398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 30824129 - 30824036
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||||||||||    
T  30824129 ttttccttttttcatcaacctcctcacctataaatagagccctcatttcacacaatttgacacaccaaaaagttctcttgagttgtcaaagaac 30824036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 35091269 - 35091176
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  35091269 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 35091176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 3917198 - 3917102
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttc----acacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    |||||||||||||| | |||||||||||||||||    
T  3917198 ttttccttttttcatcaacctcctcatctataaatagagccctcattccacacaatttcacgtacacaccaaaagttctcttgagttgtcaaagaac 3917102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 89 - 170
Target Start/End: Complemental strand, 10984670 - 10984589
Alignment:
Q  89 tttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaa 170  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  10984670 ttttttatcaaactcctcacatataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaa 10984589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20459070 - 20458976
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| | |||||||| || ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||    
T  20459070 aatttttcttttttcataaaactcatcacatataaatagagccctcattccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 20458976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 18909546 - 18909638
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||| |||| | |||| || | |||||||||||||||||    
T  18909546 aattttccatttt-catcaacctcttcacctataaatagagccctcatccctcacaatttgacac-caaaaaattctcttgagttgtcaaagaac 18909638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 293
Target Start/End: Complemental strand, 10984504 - 10984450
Alignment:
Q  239 gtctattcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||| |||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  10984504 gtctcttcggaaaagtccctttggaattttgtcccttcggtaatttttgtccctt 10984450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 174
Target Start/End: Complemental strand, 29601002 - 29600943
Alignment:
Q  115 atagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||| ||||||||||||||| |||| || | |||||||||||||||||    
T  29601002 atagagccctcattcctcacaatttcacacactaaaatttctcttgagttgtcaaagaac 29600943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 25505961 - 25505919
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  25505961 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 25505919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 22778556 - 22778511
Alignment:
Q  250 aaagtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||    
T  22778556 aaagtcccttcggaattttgttccttcggtaatttttgtccctttg 22778511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 26897074 - 26897122
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  26897074 ttcggaaaagtcccttcggaattttgtcccttcgat-aattttgtccctt 26897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 28002323 - 28002396
Alignment:
Q  101 ctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||   ||||||||||||||||||| || |||| || | ||||| |||||||||||    
T  28002323 ctcctcacctataaatagagctgacattccacacaatttcacatacaaaaaattctcttgagctgtcaaagaac 28002396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 28702332 - 28702292
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  28702332 gtcccttcggaattttgtcccttcggtaatttttgtccctt 28702292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 30823949 - 30823913
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  30823949 ttcggaaaagtcccttcggaattttgtcccttcggta 30823913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 12666977 - 12666942
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  12666977 ttcggaaaagtcccttcggaattttgtcccttcggt 12666942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 20452081 - 20452039
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  20452081 aagtcccttcggaattttgtcccttcggtgatttttgtccctt 20452039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 20458898 - 20458856
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  20458898 aagtcccttcggaattttgtcccttcggtgatttttgtccctt 20458856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 844351 - 844310
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  844351 gacaagtttagaacactatgaaaggttcatttactaaaattt 844310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 10915547 - 10915506
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  10915547 gacaagtttagaacactatgaaaggttcatttactaaaattt 10915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 12663257 - 12663298
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccct 292  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  12663257 aagtcccttcggaattttgtcccttcggtattttttgtccct 12663298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 22764307 - 22764262
Alignment:
Q  250 aaagtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||    
T  22764307 aaagtcccttcgaaattttgttccttcggtaatttttgtccctttg 22764262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 26356775 - 26356734
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  26356775 gacaagtttagaacactatgaaaggttcatttactaaaattt 26356734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 30661023 - 30660982
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  30661023 gacaagtttagaacactatgaaaggttcatttactaaaattt 30660982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 22232047 - 22232012
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22232047 ttcgggaaagtcccttcggaattttgtcccttcggt 22232012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 15721115 - 15721149
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttact 77  Q
    ||||||||||||| |||||||||||||||||||||    
T  15721115 gacaagtttagaacactatgaaaggttcatttact 15721149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 17697440 - 17697478
Alignment:
Q  46 aagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  17697440 aagtttagaacactatgaaaggttcatttactaaaattt 17697478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 20977607 - 20977573
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttact 77  Q
    ||||||||||||| |||||||||||||||||||||    
T  20977607 gacaagtttagaacactatgaaaggttcatttact 20977573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 33744714 - 33744752
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  33744714 acaagtttagaacactatgaaaggttcatttactaaaat 33744752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 5079558 - 5079599
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  5079558 gacaagtttagaacactatgaaaggttcaattactaaaattt 5079599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 5087241 - 5087282
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  5087241 gacaagtttagaacactatgaaatgttcatttactaaaattt 5087282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 5974360 - 5974401
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  5974360 gacaagtttagaatactatgaaaggttcattaactaaaattt 5974401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 8710079 - 8710038
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  8710079 gacaagtttagaatactatgaaaggttcattaactaaaattt 8710038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 12481999 - 12481958
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| |||||||||||||||||| || ||||||    
T  12481999 gacaagtttagaacactatgaaaggttcatttgctaaaattt 12481958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 288
Target Start/End: Complemental strand, 29600866 - 29600829
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgt 288  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  29600866 aagtcccttcgaaattttgtcccttcggtaatttttgt 29600829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 30492953 - 30492912
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| |||||||| |||||||||||| ||||||    
T  30492953 gacaagtttagaacactatgaagggttcatttactaaaattt 30492912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 35091106 - 35091070
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  35091106 ttcggaaaagtcccttcggaattttatcctttcggta 35091070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 17889 - 17795
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17889 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctattgagttgtcaaagaac 17795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 42565538 - 42565446
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  42565538 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 42565446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 42574162 - 42574070
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  42574162 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 42574070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 24690554 - 24690648
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  24690554 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacaaaaagttctcttgagttgtcaaagaac 24690648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 36735784 - 36735878
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||||||||||||||    
T  36735784 aattttccatttttcatcaacctcctcacctataaatagagccctcatttcacacaatttcacataccaaaagttctcttgagttgtcaaagaac 36735878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 38084125 - 38084031
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  38084125 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtaaaagaac 38084031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 15944147 - 15944055
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  15944147 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattgcacacaccaaaagttctcttgagttgtcaaagaac 15944055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 15952662 - 15952570
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  15952662 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 15952570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 35139069 - 35139161
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  35139069 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 35139161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 35147405 - 35147497
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  35147405 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 35147497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 5870712 - 5870618
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5870712 aattttcctttcttcatcaacctcttcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 5870618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 5873854 - 5873760
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  5873854 aattttcctttcttcatcaacctcttcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 5873760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 11874156 - 11874250
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  11874156 aattttcattttttcatcaacctcctcacctataaatggagccctcattccacacaatttcacacacaaaaagttctcttgagttgtcaaagaac 11874250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 19884040 - 19883947
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  19884040 aattttccatttt-catcaacctcctcacctataaatagagctctcattccacaaaatttcacacaccaaaagttcttttgagttgtcaaagaac 19883947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 41233433 - 41233340
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  41233433 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 41233340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 18500692 - 18500780
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||      ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  18500692 aattttccttttttcatcaaactcctcaccta------gagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 18500780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 18972690 - 18972610
Alignment:
Q  92 ttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||||| | |||||||||||||||||    
T  18972690 ttcatcaacctcctcacctataaatagagccttcattccacacaattt--gacaccaaaagttctcttgagttgtcaaagaac 18972610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 17710 - 17661
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  17710 ttcggaaaagtcccttcggaattttgtccattcggtaatttttgtccctt 17661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 15952491 - 15952449
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  15952491 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 15952449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 35139240 - 35139282
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  35139240 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 35139282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 35147576 - 35147618
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  35147576 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 35147618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 42565367 - 42565325
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  42565367 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 42565325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 42573991 - 42573949
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  42573991 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 42573949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 24690714 - 24690754
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  24690714 gtcccttcggaattttgtcccttcggtaatttttgtccctt 24690754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 15943969 - 15943934
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  15943969 ttcggaaaagtcccttcggaattttgtcccttcggt 15943934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 25666283 - 25666241
Alignment:
Q  42 tgacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  25666283 tgacaagtttagaacactatgaaaggttcatttactaaaattt 25666241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 10357559 - 10357518
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  10357559 gacaagtttagaacactatgaaaggttcatttactaaaattt 10357518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 13372046 - 13372087
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  13372046 gacaagtttagaacactatgaaaggttcatttactaaaattt 13372087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 18972544 - 18972503
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  18972544 gtcccttcggaattttgtcccttcggt-aattttctccctttg 18972503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 31436282 - 31436240
Alignment:
Q  42 tgacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  31436282 tgacaagtttataacactatgaaaggttcatttactaaaattt 31436240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 33832174 - 33832216
Alignment:
Q  42 tgacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  33832174 tgacaagtttataacactatgaaaggttcatttactaaaattt 33832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 7439464 - 7439423
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  7439464 gacaagtttagaacactatgaaaggttcatttagtaaaattt 7439423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 18672435 - 18672394
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  18672435 gacaagtttagaacactatgaaaggttcaattactaaaattt 18672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 25100829 - 25100788
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  25100829 gacaagtttagaacactatgaaaggttcacttactaaaattt 25100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 3043412 - 3043452
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaatt 83  Q
    ||||||||||||| | ||||||||||||||||||| |||||    
T  3043412 gacaagtttagaacaatatgaaaggttcatttactaaaatt 3043452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 31771559 - 31771519
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| |||||||||| |||||||||| ||||||    
T  31771559 acaagtttagaacactatgaaagtttcatttactaaaattt 31771519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 89474 - 89380
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  89474 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 89380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Complemental strand, 89301 - 89273
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggt 279  Q
    |||||||||||||||||||||||||||||    
T  89301 aagtcccttcggaattttgtcccttcggt 89273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 14563 - 14657
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  14563 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcagacaccaaaagttctattgagttgtcaaagaac 14657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 14742 - 14791
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14742 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtccctt 14791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20099250 - 20099156
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20099250 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacgcaccaaaagttctattgagttgtcaaagaac 20099156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 23377902 - 23377808
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  23377902 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcagacaccaaaagttctattgagttgtcaaagaac 23377808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 25526645 - 25526739
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25526645 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 25526739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 25533327 - 25533421
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25533327 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 25533421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 36448709 - 36448803
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  36448709 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 36448803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 36455093 - 36455187
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  36455093 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 36455187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 15956599 - 15956505
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  15956599 aattttccatttttcatcaacctcctcacctataaatagagccttcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 15956505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20092373 - 20092279
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20092373 aattttccattttacatcaacctcctcacctataaatagagccctcattccacacaatttcacgcaccaaaagttctattgagttgtcaaagaac 20092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 26186251 - 26186158
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaa 173  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  26186251 aattttccatttttcatcaacctcctcacctataaatagaaccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaa 26186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 28844396 - 28844488
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  28844396 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 28844488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 28853006 - 28853098
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  28853006 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 28853098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 40015354 - 40015446
Alignment:
Q  78 caaattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaa 170  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  40015354 caaattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttatcttgagttgtcaaa 40015446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20639466 - 20639372
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  20639466 aattttccatttttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgaattgtcaaagaac 20639372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 30249779 - 30249873
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  30249779 aatttttcatttttcatcaacctcctcacctataaatagagcccttattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 30249873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 25041870 - 25041776
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  25041870 aattttccttttttcatcaacctcctcacctataaatagagctatcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 25041776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 10058248 - 10058333
Alignment:
Q  90 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10058248 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaaagttctattgagttgtcaaagaac 10058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 24956440 - 24956347
Alignment:
Q  81 attttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  24956440 attttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 24956347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 43597654 - 43597561
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  43597654 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaaagttctcttgagttgtcaaagaac 43597561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 43630448 - 43630355
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  43630448 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaaagttctcttgagttgtcaaagaac 43630355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 24964899 - 24964807
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||||||||||    
T  24964899 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaagttctcttgagttgtcaaagaac 24964807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 37048822 - 37048916
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  37048822 aattttcctttcttcatcaaccttctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 37048916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 1727767 - 1727674
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  1727767 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttgacacaccgaaaagttctcttgagttgtcaaagaac 1727674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 82 - 173
Target Start/End: Complemental strand, 23349682 - 23349590
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaa 173  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| | ||||||||||||||||    
T  23349682 ttttccttttttcatcaacctcctcacctataaatagagccatcattccacacaatttcacacaccaaaaagttctcttgagttgtcaaagaa 23349590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 23377723 - 23377674
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23377723 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtccctt 23377674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 24956276 - 24956227
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24956276 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtacctt 24956227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 24964736 - 24964687
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24964736 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtacctt 24964687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 28844567 - 28844609
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  28844567 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 28844609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 28853177 - 28853219
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  28853177 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 28853219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 40015560 - 40015601
Alignment:
Q  252 agtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  40015560 agtcccttcggaattttgtcccttcggtaatttttgtccctt 40015601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 1727587 - 1727551
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  1727587 ttcggaaaagtcccttcggaattttgtcccttcggta 1727551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 43597475 - 43597439
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  43597475 ttcggaaaagtcccttcggaattttgtcccttcggta 43597439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 43630269 - 43630233
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  43630269 ttcggaaaagtcccttcggaattttgtcccttcggta 43630233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 20099071 - 20099036
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  20099071 ttcggaaaagtcccttcggaattttgtcccttcggt 20099036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 23349509 - 23349467
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  23349509 aagtcccttcgaaattttgtcccttcggtaatttttgtccctt 23349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 38227535 - 38227452
Alignment:
Q  90 ttttcatcaacctcctcacc-tataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||| |||||||| ||| |||||||| |||  ||  |||||||||||||| | |||| ||||||||||||    
T  38227535 ttttcatcaacctcctcaccctataaatatagctctcattcctcac--ttatacacaccaaaagttatcttgacttgtcaaagaac 38227452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 8337087 - 8337046
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  8337087 gacaagtttagaacactatgaaaggttcatttactaaaattt 8337046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 9924485 - 9924444
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9924485 gacaagtttagaacactatgaaaggttcatttactaaaattt 9924444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 10463981 - 10463940
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  10463981 gacaagtttagaacactatgaaaggttcatttactaaaattt 10463940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 37103276 - 37103235
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  37103276 gacaagtttagaacactatgaaaggttcatttactaaaattt 37103235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 25041710 - 25041670
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  25041710 gtcccttcgaaattttgtcccttcggtaatttttgtccctt 25041670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 30249941 - 30249980
Alignment:
Q  255 cccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  30249941 cccttcggaattttgtcccttcggt-aattttgtccctttg 30249980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 290
Target Start/End: Complemental strand, 20639293 - 20639254
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtcc 290  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  20639293 aagtcccttcggaattttgtctcttcggtaatttttgtcc 20639254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 6365348 - 6365382
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttact 77  Q
    ||||||||||||||||||||||| |||||||||||    
T  6365348 gacaagtttagaaaactatgaaatgttcatttact 6365382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 8313450 - 8313412
Alignment:
Q  45 caagtttagaaaactatgaaaggttcatttactcaaatt 83  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  8313450 caagtttagaacactatgaaaggttcatttactaaaatt 8313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 1683216 - 1683257
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  1683216 gacaagtttagaacactatgaaaagttcatttactaaaattt 1683257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 24636990 - 24637031
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  24636990 gacaaggttagaacactatgaaaggttcatttactaaaattt 24637031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Complemental strand, 26186091 - 26186054
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtcc 290  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  26186091 gtcccttcagaattttgtcccttcggtaatttttgtcc 26186054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 27308063 - 27308030
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttac 76  Q
    |||||||||||||||||||||||| |||||||||    
T  27308063 gacaagtttagaaaactatgaaagattcatttac 27308030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 34785301 - 34785342
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  34785301 gacaagtttataacactatgaaaggttcatttactaaaattt 34785342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 38693517 - 38693558
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  38693517 gacaagtttagaatactatgaaaggttcaattactaaaattt 38693558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 10058403 - 10058439
Alignment:
Q  244 ttcggaaaagtcccttcgg-aattttgtcccttcggt 279  Q
    ||||||||||||||||||| |||||||||||||||||    
T  10058403 ttcggaaaagtcccttcggtaattttgtcccttcggt 10058439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 21837182 - 21837142
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| ||||| ||||||||||||||| ||||||    
T  21837182 acaagtttagaacactataaaaggttcatttactaaaattt 21837142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 1e-41; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 19737614 - 19737520
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  19737614 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 19737520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 20548836 - 20548930
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  20548836 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 20548930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 50188250 - 50188344
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  50188250 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 50188344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 55792838 - 55792744
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  55792838 aattttccatttttcatcaacctccccacctataaatagagccctcattccacacaatttcacacaccaaaagttctattgagttatcaaagaac 55792744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 3382045 - 3381951
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  3382045 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 3381951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 8657955 - 8658049
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||    
T  8657955 aattttccttttttcatcaacctcctcacctataaatagagccctcaatccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 8658049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 3388791 - 3388697
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||    
T  3388791 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaaattctcttgagttgtcaaagaac 3388697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 39745031 - 39744937
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  39745031 aattttccttttttcatcaaacttctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 39744937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 8093883 - 8093790
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||||||||||    
T  8093883 ttttccttttttcatcaacctcctcacctataaatagagccctcatttcacacaatttgacacaccaaaaagttctcttgagttgtcaaagaac 8093790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 8102688 - 8102595
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | |||||||||||||||||    
T  8102688 ttttccttttttcatcaacctcctcacctataaatagagccctcatttcacacaatttgacacaccaaaaagttctcttgagttgtcaaagaac 8102595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 38853819 - 38853912
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaa 173  Q
    |||||||| ||||||||||| |||||||||||||||||||||  |||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  38853819 aattttccttttttcatcaaactcctcacctataaatagagcattcattccacacaatttgacacaccaaaagttctcttgagttgtcaaagaa 38853912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 8817097 - 8817024
Alignment:
Q  101 ctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |||||||||||||||||    
T  8817097 ctcctcacctataaatagagctcacattccacacaatttcacacaccaaaagttatcttgagttgtcaaagaac 8817024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 50188415 - 50188466
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50188415 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtccctttg 50188466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 167
Target Start/End: Complemental strand, 18482985 - 18482899
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtc 167  Q
    ||||||||||||| |||||||||    ||||||||||||||| ||||||| ||||||||| |||||||||||||| | ||||||||||    
T  18482985 aattttccatttt-catcaacctttaaacctataaatagagctctcattcgacacaatttgacacaccaaaagttctcttgagttgtc 18482899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 8093704 - 8093668
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  8093704 ttcggaaaagtcccttcggaattttgtcccttcggta 8093668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 8102509 - 8102473
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  8102509 ttcggaaaagtcccttcggaattttgtcccttcggta 8102473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 28448442 - 28448492
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattttccattttt 93  Q
    ||||||||||||| ||||||||||||||||||||| |||||| | ||||||    
T  28448442 gacaagtttagaacactatgaaaggttcatttactaaaatttacaattttt 28448492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 3873203 - 3873244
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  3873203 gacaagtttagaacactatgaaaggttcatttactaaaattt 3873244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 8816953 - 8816905
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||    
T  8816953 ttcggaaaagtcccttcggaattttgtccattcgat-aattttgtccctt 8816905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 19522956 - 19522915
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  19522956 gacaagtttagaacactatgaaaggttcatttactaaaattt 19522915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 47379227 - 47379268
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  47379227 gacaagtttagaatactatgaaaggttcatttactaaaattt 47379268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 53324019 - 53323978
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  53324019 gacaagtttagaacactatgaaaggttcatttactaaaattt 53323978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 53423614 - 53423655
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  53423614 gacaagtttagaacactatgaaaggttcatttactaaaattt 53423655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 30331330 - 30331370
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  30331330 acaagtttagaacactatgaaaggttcatttactaaaattt 30331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 44289921 - 44289883
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  44289921 acaagtttagaacactatgaaaggttcatttactaaaat 44289883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 31316785 - 31316744
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  31316785 gacaagtttagaacactatgaaaggttcaattactaaaattt 31316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 33177472 - 33177513
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  33177472 gacaagtttagaatactatgaaaagttcatttactaaaattt 33177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 43938247 - 43938206
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  43938247 gacaagcttagaacactatgaaaggttcatttactaaaattt 43938206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 47309678 - 47309637
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  47309678 gacaagtttagaacactgtgaaaggttcatttactaaaattt 47309637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 4313198 - 4313104
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  4313198 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaattttacacaccaaaagttctattgagttgtcaaagaac 4313104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 8606618 - 8606712
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  8606618 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 8606712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 13105246 - 13105152
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  13105246 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 13105152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 23287734 - 23287640
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  23287734 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 23287640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 13111400 - 13111309
Alignment:
Q  83 tttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  13111400 tttccatttttcatcaacctcctcacctataaatagagccatcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 13111309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 68611 - 68705
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  68611 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 68705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 74704 - 74798
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  74704 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 74798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 8613079 - 8613173
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  8613079 aattttccatttttcatcaacctcctcacctataaatagagccttcattccacacaatttcacacaccaaaagttctcttgagttgccaaagaac 8613173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 9525022 - 9524928
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||    
T  9525022 aattttccttttttcatcaacctcctcacctataaatagagccctcattccatacaatttcacacaccaaaagttctcttgagttgtcaaagaac 9524928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 9554698 - 9554604
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||    
T  9554698 aattttccttttttcatcaacctcctcacctataaatagagccctcattccatacaatttcacacaccaaaagttctcttgagttgtcaaagaac 9554604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 14880918 - 14880824
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  14880918 aattttccatttttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacatcaaaagttctcttgagttgtcaaagaac 14880824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 14892733 - 14892639
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  14892733 aattttccatttttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacatcaaaagttctcttgagttgtcaaagaac 14892639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 17934530 - 17934624
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  17934530 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaattttacacaccaaaagttctcttgagttgtcaaagaac 17934624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 48060336 - 48060242
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  48060336 aattttccatttttcatcaacctcttcaactataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 48060242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 14887635 - 14887541
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  14887635 aattttccttttttcatcaaactcctcacctataaatagaaccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 14887541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 21638165 - 21638071
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  21638165 aattttccttttttcatcaaactcctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 21638071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 37468484 - 37468578
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  37468484 aattttccatttttcatcaacctcctcacctataaatagagtcatcattccacacaatttcacacaccaaaagttctcttgaattgtcaaagaac 37468578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 8154247 - 8154154
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  8154247 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttgacacaccaaaaagttctcttgagttgtcaaagaac 8154154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 261815 - 261907
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaaga 172  Q
    |||||||| || |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||    
T  261815 aattttcctttcttcatcaaccccctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaaga 261907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 26386314 - 26386224
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaa 170  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||| || | |||||||||||||    
T  26386314 aattttccatttttcatcaacctccttacctataaatagaactctcattccacacaatttcacacaccaaaaattctcttgagttgtcaaa 26386224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 41015813 - 41015906
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  41015813 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 41015906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 11181227 - 11181319
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | | |||||||||||||||    
T  11181227 aattttcctttcttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacaccaaaagt--tctcgagttgtcaaagaac 11181319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 41007033 - 41007127
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc--aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||||| | |||||||||||||||||    
T  41007033 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacacccaaaaagttctcttgagttgtcaaagaac 41007127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 16030922 - 16030828
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||   |||||||||||||||||    
T  16030922 aattttccttttttcatcaaactcctcacctataaatagagccctcatttcacaaaattttacacaccaaaagttcacttgagttgtcaaagaac 16030828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 16815454 - 16815364
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  16815454 aattttccttttttcatcaacctcctcacctatata----gccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 16815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 35491496 - 35491564
Alignment:
Q  83 tttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaa 151  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  35491496 tttccatttttcatcaacctcctcacctataaatagagccatcattccacacaatttcagacaccaaaa 35491564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 14887240 - 14887194
Alignment:
Q  247 ggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14887240 ggaaaagtcccttcggaattttgtcccttcggtaatttttgtccctt 14887194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 68784 - 68826
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  68784 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 68826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Original strand, 74877 - 74919
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  74877 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 74919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 23287561 - 23287519
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  23287561 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 23287519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 44363123 - 44363049
Alignment:
Q  90 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagtt 164  Q
    |||||||||||||||||||||||||||| ||| |||||||||| |     ||||||||||||||| |||||||||    
T  44363123 ttttcatcaacctcctcacctataaatatagctctcattccactcttcaacacacaccaaaagttctattgagtt 44363049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 9524842 - 9524793
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  9524842 ttcggaaaggtcccttcgaaattttgtcccttcggtaatttttgtccctt 9524793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Complemental strand, 9554517 - 9554468
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  9554517 ttcggaaaggtcccttcgaaattttgtcccttcggtaatttttgtccctt 9554468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Original strand, 12558353 - 12558402
Alignment:
Q  125 cattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  12558353 cattccacacaatttcagacaccaaaagttctcttgagttgtcaaagaac 12558402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 48060166 - 48060122
Alignment:
Q  249 aaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  48060166 aaaagtcccttcggaattttgtcgcttcggtaatttttgtccctt 48060122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 25250258 - 25250217
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  25250258 gacaagtttagaacactatgaaaggttcatttactaaaattt 25250217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Original strand, 17934708 - 17934743
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    |||||||||||||||||| |||||||||||||||||    
T  17934708 ttcggaaaagtcccttcgaaattttgtcccttcggt 17934743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 14880745 - 14880703
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||| |||||||||||| ||| |||||||    
T  14880745 aagtcccttcggaattttatcccttcggtaattttcgtccctt 14880703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 14892560 - 14892518
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||| ||||| ||| |||||||    
T  14892560 aagtcccttcggaattttgtcccttgggtaattttcgtccctt 14892518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 39562601 - 39562639
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  39562601 acaagtttagaacactatgaaaggttcatttactaaaat 39562639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 44362960 - 44362918
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||| |||| ||||||||||||||||||| |||||||||||    
T  44362960 aagtcctttcgaaattttgtcccttcggtaatttttgtccctt 44362918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 45406904 - 45406866
Alignment:
Q  46 aagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  45406904 aagtttagaacactatgaaaggttcatttactaaaattt 45406866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 46295296 - 46295258
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  46295296 acaagtttagaacactatgaaaggttcatttactaaaat 46295258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 11181405 - 11181453
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||||||||    
T  11181405 ttcggaaaagtcccttcggaa-taagtcccttcggtaatttttgtccctt 11181453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 21749810 - 21749769
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  21749810 gacaagtttagaatactgtgaaaggttcatttactaaaattt 21749769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 37179186 - 37179145
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  37179186 gacaagtttagaacactatgaaaggttcaattactaaaattt 37179145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 45419836 - 45419877
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  45419836 gacaagtttagaacattatgaaaggttcatttactaaaattt 45419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 11294037 - 11293997
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| ||||||||| ||||||||||| ||||||    
T  11294037 acaagtttagaacactatgaaaagttcatttactaaaattt 11293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 26386153 - 26386113
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||| ||| |||||||| |||||||||||    
T  26386153 gtcccttcggaattttatcctttcggtaatttttgtccctt 26386113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 38174145 - 38174105
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| |||||||||||||||| |||| ||||||    
T  38174145 acaagtttagaacactatgaaaggttcatatactaaaattt 38174105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 78 - 174
Target Start/End: Original strand, 24046 - 24142
Alignment:
Q  78 caaattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  24046 caaatttttcatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 24142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 32007195 - 32007289
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  32007195 aattttccatttttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 32007289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 39845214 - 39845122
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  39845214 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 39845122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 22162592 - 22162499
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  22162592 aattttccatttttcatcaacctcctcaccta-aaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 22162499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 39837172 - 39837080
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||    
T  39837172 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttgacacaccaaaagttctcttgagttgtcaaagaac 39837080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 32000229 - 32000320
Alignment:
Q  83 tttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  32000229 tttccatttttcatcaacctcctcacctataaatagagccctcattccacaaaattttacacaccaaaagttctcttgagttgtcaaagaac 32000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 22156589 - 22156496
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  22156589 aattttccatttttcatcaacctcctcaccta-aaatagagccctcattccacacaatttcacataccaaaagttctcttgagttgtcaaagaac 22156496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 25858872 - 25858778
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| | ||||||||| |||||||    
T  25858872 aattttccatttttcatcaacctcctcacctataaatagagccatcatcccacacaatttcacacaccaaaagttctcttgagttgttaaagaac 25858778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 32025255 - 32025161
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  32025255 aattttccttttttcatcaaactcatcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 32025161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 30938758 - 30938851
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  30938758 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 30938851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 25852625 - 25852562
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcaca 143  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25852625 aattttccatttttcatcaacctcctcacttatagatagagccctcattccacacaatttcaca 25852562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 170
Target Start/End: Original strand, 13386096 - 13386176
Alignment:
Q  90 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaa 170  Q
    ||||||||||| |||||||||||||||| |||  ||||||| ||||||||||||||||||||||| | |||||||||||||    
T  13386096 ttttcatcaacttcctcacctataaatatagctttcattcctcacaatttcacacaccaaaagttctcttgagttgtcaaa 13386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 39837001 - 39836959
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  39837001 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 39836959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 39845043 - 39845001
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  39845043 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 39845001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 6590508 - 6590467
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  6590508 gacaagtttagaacactatgaaaggttcatttactaaaattt 6590467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 42499429 - 42499470
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  42499429 gacaagtttagaacactatgaaaggttcatttactaaaattt 42499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 5765766 - 5765804
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  5765766 acaagtttagaacactatgaaaggttcatttactaaaat 5765804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 28755225 - 28755263
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  28755225 acaagtttagaacactatgaaaggttcatttactaaaat 28755263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 36470877 - 36470915
Alignment:
Q  46 aagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  36470877 aagtttagaacactatgaaaggttcatttactaaaattt 36470915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 5695962 - 5696003
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  5695962 gacaagtttaaaacactatgaaaggttcatttactaaaattt 5696003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 6018281 - 6018240
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  6018281 gacaagtttagaacattatgaaaggttcatttactaaaattt 6018240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 21640609 - 21640681
Alignment:
Q  101 ctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||| ||| |||| |||  || | ||| ||||||||| | |||||||||||||||||    
T  21640609 ctcctcacctataaatagagcactc-ttcctcacttttactcaccccaaaagttctcttgagttgtcaaagaac 21640681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 23483586 - 23483545
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  23483586 gacaagtttagaacactatgaaaggttcatttattaaaattt 23483545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 24451726 - 24451685
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  24451726 gacaagtttagaacactatgaaaggttcaattactaaaattt 24451685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 27875496 - 27875537
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||    
T  27875496 gacaagtttagaacactattaaaggttcatttactaaaattt 27875537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 28015677 - 28015718
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||    
T  28015677 gacaagtttagaacactattaaaggttcatttactaaaattt 28015718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 35863283 - 35863242
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  35863283 gacaagtttagaacactatgaaaggttcaattactaaaattt 35863242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 37967778 - 37967745
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttac 76  Q
    ||||||||||||| ||||||||||||||||||||    
T  37967778 gacaagtttagaacactatgaaaggttcatttac 37967745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 38706492 - 38706533
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  38706492 gacaagtttagaacaatatgaaaggttcatttactaaaattt 38706533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 44265690 - 44265649
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| |||||||||||||||||| || ||||||    
T  44265690 gacaagtttagaacactatgaaaggttcatttgctaaaattt 44265649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 32000399 - 32000427
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggt 279  Q
    |||||||||||||||||||||||||||||    
T  32000399 aagtcccttcggaattttgtcccttcggt 32000427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 33322774 - 33322742
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttac 76  Q
    |||||||||||| ||||||||||||||||||||    
T  33322774 acaagtttagaacactatgaaaggttcatttac 33322742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 6851616 - 6851522
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||||||    
T  6851616 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacatcaaaagttctcttgagttgtcaaagaac 6851522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 46461721 - 46461629
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaaga 172  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  46461721 aattttccatttttcatcaacctcctcacctataaatagggccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaaga 46461629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 28415591 - 28415685
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | |||||||||||||||||    
T  28415591 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacatatcaaaagttctcttgagttgtcaaagaac 28415685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20542505 - 20542412
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||||||    
T  20542505 aattttccattttttatcaacctcctcacctataaatagagccctcattccacacaatttcacataccaaaagttct-ctgagttgtcaaagaac 20542412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 18303992 - 18303899
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||    
T  18303992 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcagacaccaaaaagttctcttgagttgtcaaagaac 18303899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 1858175 - 1858081
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  1858175 aattttcctttcttcatcaaccttctcacctataaatagagctctcattccacacaatttcacacaccaacagttctcttgagttgtcaaagaac 1858081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 43005291 - 43005217
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagtt 154  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43005291 aatttttcatttttcatcaacctcctcacctataaatagagccctcattccacataatttcacacaccaaaagtt 43005217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 12978931 - 12979024
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  12978931 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 12979024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 13831954 - 13832047
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  13831954 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 13832047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 13839984 - 13840077
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  13839984 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 13840077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 44412918 - 44412824
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaattt--cacacaccaaaagttgtattgagttgtcaaagaa 173  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||    
T  44412918 aattttccatttt-catcaacctcctcgcctataaatagagccctcattccacacaattttacacacaccaaaagttctcttgagttgtcaaagaa 44412824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 46299526 - 46299433
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| | ||| |||||||||||||    
T  46299526 aattttccatttt-catcaacctcctcacctataaatagagctctcatccctcacaatttcacacaccaaaagttctcttgggttgtcaaagaac 46299433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 4831949 - 4831856
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||| || |||||||||| |||||||||||| | |||||||||||||||||    
T  4831949 aattttccattttt-atcaacctcctcatctataaatagagccatcatccctcacaatttcagacaccaaaagttctcttgagttgtcaaagaac 4831856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 34138738 - 34138683
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacaca 135  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  34138738 aattttcctttcttcatcaacctcctcacctataaatagagccctcattccacaca 34138683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 132
Target Start/End: Complemental strand, 34132426 - 34132374
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccac 132  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  34132426 aattttcctttcttcatcaacctcctcacctataaatagagccctcattccac 34132374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 34138575 - 34138533
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  34138575 aagtcccttcggaattttgtcccttcggtaatttttgtccctt 34138533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 280
Target Start/End: Complemental strand, 18303828 - 18303792
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggta 280  Q
    |||||||||||||||||||||||||||||||||||||    
T  18303828 ttcggaaaagtcccttcggaattttgtcccttcggta 18303792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 18156675 - 18156628
Alignment:
Q  239 gtctattcggaaaagtcccttcggaattttgtcccttcggtaaatttt 286  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  18156675 gtctcttcggaaaagtcccttctgaattttgtcccttcggtaattttt 18156628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 34132271 - 34132236
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||||||||||||||||||||||||||||||||||    
T  34132271 ttcggaaaagtcccttcggaattttgtcccttcggt 34132236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 18059250 - 18059209
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  18059250 gacaagtttagaacactatgaaaggttcatttactaaaattt 18059209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 117
Target Start/End: Original strand, 22347309 - 22347346
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaata 117  Q
    |||||||||||||||||||||||||||||| |||||||    
T  22347309 aattttccatttttcatcaacctcctcaccaataaata 22347346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 38159196 - 38159155
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  38159196 gacaagtttagaacactatgaaaggttcatttactaaaattt 38159155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 43597535 - 43597576
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  43597535 gacaagtttagaacactatgaaaggttcatttactaaaattt 43597576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 4831808 - 4831762
Alignment:
Q  247 ggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||||||    
T  4831808 ggaaaagttccttcgaaatgttgtcccttcggtaatttttgtccctt 4831762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 84
Target Start/End: Complemental strand, 4926616 - 4926578
Alignment:
Q  46 aagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  4926616 aagtttagaacactatgaaaggttcatttactaaaattt 4926578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 174
Target Start/End: Complemental strand, 34138688 - 34138654
Alignment:
Q  140 cacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||| |||||||||||||||||||    
T  34138688 cacacaccaaaagttctattgagttgtcaaagaac 34138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 6331140 - 6331099
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  6331140 gacaagtttaaaacactatgaaaggttcatttactaaaattt 6331099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 7238627 - 7238668
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| | ||||||||||||||||||| ||||||    
T  7238627 gacaagtttagaacattatgaaaggttcatttactaaaattt 7238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 15130954 - 15130913
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  15130954 gacaagtttagaacactatgaaaggttcaattactaaaattt 15130913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 25831800 - 25831873
Alignment:
Q  101 ctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||  ||||| | |||   |||  |||||||||||| | |||||||||||||||||    
T  25831800 ctcctcacctataaatagagctttcatttctcacttcttcttacaccaaaagttctcttgagttgtcaaagaac 25831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 35482110 - 35482151
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||    
T  35482110 gacaagtttagaacactatgaaatgttcatttactaaaattt 35482151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 44081202 - 44081161
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  44081202 gacaaatttagaatactatgaaaggttcatttactaaaattt 44081161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 46044342 - 46044383
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  46044342 gacaagtttagaacactatgaaaggttcaattactaaaattt 46044383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 46331043 - 46331002
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  46331043 gacaagtttagaacactatgaaaggttcaattactaaaattt 46331002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 117
Target Start/End: Complemental strand, 7528486 - 7528458
Alignment:
Q  89 tttttcatcaacctcctcacctataaata 117  Q
    |||||||||||||||||||||||||||||    
T  7528486 tttttcatcaacctcctcacctataaata 7528458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 20542332 - 20542292
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||| ||||| ||||||||||| |||||||||||    
T  20542332 gtcccttcggagttttgccccttcggtaatttttgtccctt 20542292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 33625030 - 33624990
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||||| ||||||||||||||| ||||| ||||||    
T  33625030 acaagtttagaacactatgaaaggttcaattactaaaattt 33624990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 2416307 - 2416213
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2416307 aattttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 2416213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 44832156 - 44832062
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  44832156 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcagacaccaaaagttctcttgagttgtcaaagaac 44832062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 78 - 173
Target Start/End: Original strand, 19367922 - 19368017
Alignment:
Q  78 caaattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaa 173  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  19367922 caaattttccttttttcatcaacctcctcacctataaatagatccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaa 19368017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 47108834 - 47108928
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  47108834 aattttccttttttcatcaaactcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 47108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 20429818 - 20429913
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  20429818 aattttccatttttcattaacctcctcacctataaatagaaccctcattccacacaatttcacacaccaaaaagttctcttgagttgtcaaagaac 20429913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 15473470 - 15473376
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  15473470 aattttccttttttcatcaacctccttacttataaatagagacctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 15473376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 31540430 - 31540523
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  31540430 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 31540523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 31548999 - 31549092
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| | |||||||||||||||||    
T  31548999 ttttccttttttcatcaacctcctcacctataaatagagccctcataccacacaattacacacaccaaaaagttctcttgagttgtcaaagaac 31549092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 3432501 - 3432410
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| | |||||||||||| ||||    
T  3432501 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttgacac-caaaaagttctcttgagttgtcaatgaac 3432410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 51968390 - 51968483
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaa 173  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| || ||||||||| |||||| ||||||| | ||||||||||||||||    
T  51968390 aattttccatttt-catcaacctcctcacctataaatagatccctcatccctcacaatttctcacaccaaaaagttctcttgagttgtcaaagaa 51968483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 19368089 - 19368138
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19368089 ttcggaaaagtcccttcggaattttgtcccttcggtaatttttgtccctt 19368138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 47110405 - 47110454
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||||    
T  47110405 ttcgaaaaagtcccttcggaattttgtcgcttcggtaatttttgtccctt 47110454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 20429979 - 20430019
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  20429979 gtcccttcggaattttgtcccttcggtaatttttgtccctt 20430019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 30719724 - 30719683
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  30719724 gacaagtttagaacactatgaaaggttcatttactaaaattt 30719683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 43505011 - 43504970
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  43505011 gacaagtttagaacactatgaaaggttcatttactaaaattt 43504970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 46517223 - 46517264
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  46517223 gacaagtttagaacactatgaaaggttcatttactaaaattt 46517264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 51561398 - 51561439
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  51561398 gacaagtttagaacactatgaaaggttcatttactaaaattt 51561439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 26020449 - 26020491
Alignment:
Q  42 tgacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||| || ||||||||||||||||||||| ||||||    
T  26020449 tgacaagtttataacactatgaaaggttcatttactaaaattt 26020491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 31400463 - 31400425
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  31400463 acaagtttagaacactatgaaaggttcatttactaaaat 31400425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 23191469 - 23191542
Alignment:
Q  101 ctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||| ||| |||| |||   ||| ||| ||||||| | | |||||||||||||||||    
T  23191469 ctcctcacctataaatagagctctctttcctcacttcttctcaccccaaaagatcttttgagttgtcaaagaac 23191542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 33708996 - 33709037
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  33708996 gacaagtttagaacactatgaaaggttcaattactaaaattt 33709037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 39682039 - 39681998
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  39682039 gacaagtttaaaacactatgaaaggttcatttactaaaattt 39681998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 47008698 - 47008739
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||    
T  47008698 gacaagtttagaacactatgaaaggtttatttactaaaattt 47008739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 52493772 - 52493731
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    |||||| |||||| ||||||||||||||||||||| ||||||    
T  52493772 gacaaggttagaacactatgaaaggttcatttactaaaattt 52493731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 978 - 893
Alignment:
Q  89 tttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  978 tttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 77; Significance: 9e-36; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 33317 - 33233
Alignment:
Q  90 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  33317 ttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 33233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 33162 - 33112
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    |||||||||||| ||| ||||||||||||||||| | |||||||||||||||    
T  33162 ttcggaaaagtcactttggaattttgtcccttcgat-aattttgtccctttg 33112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 39818 - 39725
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||    
T  39818 aattttccatttt-catcaacctcctcacctataaatagagccctcattcctcacaatttcacacaccaaaagttctcttgagttgtcaaagaac 39725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 86298 - 86204
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  86298 aattttcctttcttcatcaacctcctcacctataaatagagctctcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 86204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 32831 - 32737
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  32831 aattttccttttttcatcaacatcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttcttttgagttatcaaagaac 32737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 32666 - 32620
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggtaaattttgtcc 290  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||    
T  32666 ttcggaaaagtcccttcggaattttgtcccttcggaaatttttgtcc 32620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold1699
Description:

Target: scaffold1699; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 993 - 901
Alignment:
Q  82 ttttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||    
T  993 ttttccttttttcatcaacctcctcacctataaatagagccctcattccacacaatttgacacacaaaaagttctcttgagttgtcaaagaac 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1699; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 279
Target Start/End: Complemental strand, 815 - 780
Alignment:
Q  244 ttcggaaaagtcccttcggaattttgtcccttcggt 279  Q
    ||||||||||||||||| ||||||||||||||||||    
T  815 ttcggaaaagtcccttcagaattttgtcccttcggt 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 152
Target Start/End: Complemental strand, 7395 - 7323
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaag 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7395 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaag 7323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 18307 - 18257
Alignment:
Q  124 tcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  18307 tcattccacacaatttcacacaccaaaagttctcttgagttgtcaaagaac 18257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 18191 - 18151
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  18191 gtcccttcggaattttgtctcttcggtaatttttgtccctt 18151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 16109 - 16204
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  16109 aattttccatttttcatcaacctcctcacctgtaaatagagccctcattccacacaatttgacacaccaaaaagttctcttgagttgtcaaagaac 16204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 66269 - 66364
Alignment:
Q  80 aattttccatttttcatcaacctc-ctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||    
T  66269 aattttccaattttcatcaacctttctcacctataaatagagccctcattccacacaatttcagacaccaaaagttctcttgagttgtcaaagaac 66364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 9365 - 9459
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    |||||||||||||||||||| || |||||||||||||||||| || ||| |||||||||| |||||| ||||||| | |||||||||||||||||    
T  9365 aattttccatttttcatcaatctgctcacctataaatagagctctgatttcacacaatttgacacactaaaagttctcttgagttgtcaaagaac 9459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 9525 - 9566
Alignment:
Q  253 gtcccttcggaattttgtcccttcggtaaattttgtccctttg 295  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  9525 gtcccttcggaattttgtcccttcggt-aattttctccctttg 9566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 7217 - 7125
Alignment:
Q  80 aattttccatttttcatcaacctcctcacctataaatagagccctcattccacacaatttcacacacc-aaaagttgtattgagttgtcaaag 171  Q
    |||||||  |||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| | ||||||||||||||    
T  7217 aattttctttttttcatcaagatcctcacctataaatagagtcctcattccacacaatttcacaaaccaaaaagttctcttgagttgtcaaag 7125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 7041 - 6999
Alignment:
Q  251 aagtcccttcggaattttgtcccttcggtaaattttgtccctt 293  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  7041 aagtcccttcggaattttgtcccttcggtaacttttgtccctt 6999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 4022 - 4063
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  4022 gacaagtttagaacactatgaaaggttcatttactaaaattt 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 158078 - 158119
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  158078 gacaagtttagaacactatgaaaggttcatttactaaaattt 158119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Complemental strand, 1402 - 1363
Alignment:
Q  45 caagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  1402 caagtttagaacactatgaaaggttcatttactaaaattt 1363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 84
Target Start/End: Original strand, 6227 - 6266
Alignment:
Q  45 caagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  6227 caagtttagaacactatgaaaggttcatttactaaaattt 6266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 3944 - 3982
Alignment:
Q  44 acaagtttagaaaactatgaaaggttcatttactcaaat 82  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  3944 acaagtttagaacactatgaaaggttcatttactaaaat 3982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 6913 - 6954
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||    
T  6913 gacaagtttagaacactatgaaaggttcaattactaaaattt 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 5968 - 6009
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||    
T  5968 gacaagtttggaacactatgaaaggttcatttactaaaattt 6009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5914 - 5946
Alignment:
Q  12 acaaagtttgtttaattatcctaaaactcttga 44  Q
    |||||||||||||||||||||| ||||||||||    
T  5914 acaaagtttgtttaattatccttaaactcttga 5946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 21801 - 21842
Alignment:
Q  43 gacaagtttagaaaactatgaaaggttcatttactcaaattt 84  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||    
T  21801 gacaagtttagaacactataaaaggttcatttactaaaattt 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 43815 - 43751
Alignment:
Q  109 ctataaatagagccctcattccacacaatttcacacaccaaaagttgtattgagttgtcaaagaac 174  Q
    ||||||||||||||||||| || || ||||| |||| | ||||||| | |||||||||||||||||    
T  43815 ctataaatagagccctcatccctcataatttaacac-caaaaagttctcttgagttgtcaaagaac 43751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 248 - 280
Target Start/End: Original strand, 14479 - 14511
Alignment:
Q  248 gaaaagtcccttcggaattttgtcccttcggta 280  Q
    ||||||| |||||||||||||||||||||||||    
T  14479 gaaaagttccttcggaattttgtcccttcggta 14511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University