View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6290_high_26 (Length: 281)
Name: NF6290_high_26
Description: NF6290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6290_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 40771150 - 40771406
Alignment:
| Q |
1 |
taatcattcttcataatcaaaattcaataatcacctctccaagaacaagtgagtccaaaaaggccataggaagctcctcttgacactcatggatagccaa |
100 |
Q |
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| T |
40771150 |
taatcattcttcataatcaaaattcaataatcacctctccaagaacaagtgagtccaaaaaggccataggaagctcctcttgacactcatggatagccaa |
40771249 |
T |
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| Q |
101 |
atccttttcagttactttgtcaatctttttaaaagcatacaaaggtagctttgcatctattaacaaaacaataaccaaaatcacaaaaattaatcttttt |
200 |
Q |
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| T |
40771250 |
atccttttcggttactttgtcaatctttttaaaagcatacaaaggtagctttgcatctattaacaaaacaataaccaaaatcacaaaaattaatcttttt |
40771349 |
T |
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| Q |
201 |
tatccataagcccataaccaaactaaataataatacatgcatggcaacaaccgcaac |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40771350 |
tatccataagcccataaccaaactaaataataatacatgcatggcaacaaccacaac |
40771406 |
T |
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