View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6291_high_15 (Length: 301)
Name: NF6291_high_15
Description: NF6291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6291_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 5 - 282
Target Start/End: Original strand, 27762305 - 27762583
Alignment:
| Q |
5 |
gaaatggaaaatggatccatcatacaaataaagctttgaaggtcaaagaatagcaagcaccaaagaaagtaccatagcaatttgtactaacactttgaat |
104 |
Q |
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| T |
27762305 |
gaaatggaaaatggatccatcatacaaataaagctttgaaggttaaagaatagcaagcaccaaagaaagtaccatagcaatttgtaccaacactttgaat |
27762404 |
T |
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| Q |
105 |
cctcaaaccaagcaaccaatggttaattttgaaaaaccattagaggagcaaccattggttatagttgaaaagcccttagaggagcaatcgttggctattg |
204 |
Q |
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| T |
27762405 |
cctcaaaccaagcaaccaatggttaattttgaaaaaccattagaggagcaaccattggttatagttgagaagcccttagaggagcaatcgttggctattg |
27762504 |
T |
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| Q |
205 |
ttgagaaacctatagatgtggtagcccctaataaaaagttgcaag-tgacacaacaacatgcgatggagacaacaatac |
282 |
Q |
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| T |
27762505 |
ttgagaaacctatagatgtggtagcccctaataaaaagttgcaagatgacacaaaaacatgcaatggagacaacaatac |
27762583 |
T |
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