View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6291_low_26 (Length: 220)

Name: NF6291_low_26
Description: NF6291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6291_low_26
NF6291_low_26
[»] chr2 (47 HSPs)
chr2 (14-201)||(40145386-40145565)
chr2 (58-116)||(11513858-11513916)
chr2 (60-116)||(33942112-33942168)
chr2 (68-118)||(35755552-35755602)
chr2 (55-116)||(10143129-10143190)
chr2 (55-116)||(10563610-10563671)
chr2 (47-116)||(28933773-28933842)
chr2 (56-112)||(14666506-14666562)
chr2 (44-116)||(29300591-29300663)
chr2 (55-117)||(1493564-1493626)
chr2 (55-113)||(3673764-3673822)
chr2 (55-121)||(39567860-39567926)
chr2 (47-116)||(43299454-43299524)
chr2 (55-116)||(6988072-6988133)
chr2 (47-116)||(15377714-15377783)
chr2 (126-187)||(39621989-39622050)
chr2 (59-115)||(550467-550523)
chr2 (55-118)||(5133729-5133792)
chr2 (55-110)||(36114581-36114636)
chr2 (61-116)||(36863677-36863732)
chr2 (56-114)||(4550735-4550793)
chr2 (62-116)||(5043612-5043666)
chr2 (55-101)||(6546935-6546981)
chr2 (60-118)||(10494630-10494688)
chr2 (55-113)||(37053551-37053609)
chr2 (55-105)||(39929824-39929874)
chr2 (55-112)||(11344340-11344397)
chr2 (125-174)||(14299615-14299664)
chr2 (55-116)||(17952753-17952814)
chr2 (154-187)||(19978013-19978046)
chr2 (58-115)||(22681238-22681295)
chr2 (56-89)||(40758981-40759014)
chr2 (55-116)||(42592296-42592357)
chr2 (55-116)||(42817428-42817489)
chr2 (61-109)||(2227129-2227177)
chr2 (55-87)||(5045238-5045270)
chr2 (55-111)||(10285310-10285366)
chr2 (83-115)||(13189440-13189472)
chr2 (57-117)||(23143029-23143089)
chr2 (57-117)||(23554819-23554879)
chr2 (55-87)||(33197320-33197352)
chr2 (48-116)||(33256690-33256758)
chr2 (61-113)||(33944568-33944620)
chr2 (74-118)||(37276722-37276766)
chr2 (58-102)||(41851969-41852013)
chr2 (60-116)||(42621593-42621649)
chr2 (52-80)||(43199197-43199225)
[»] chr6 (31 HSPs)
chr6 (55-116)||(4006671-4006732)
chr6 (55-116)||(281900-281961)
chr6 (55-118)||(33787795-33787858)
chr6 (47-89)||(5551411-5551453)
chr6 (61-110)||(11363426-11363475)
chr6 (55-116)||(29274281-29274342)
chr6 (61-116)||(33817823-33817879)
chr6 (55-98)||(9582668-9582711)
chr6 (55-118)||(14492259-14492322)
chr6 (55-118)||(22742323-22742386)
chr6 (40-118)||(4247111-4247189)
chr6 (66-116)||(31776327-31776377)
chr6 (55-116)||(1402953-1403014)
chr6 (55-116)||(2727908-2727969)
chr6 (55-116)||(2735026-2735087)
chr6 (47-80)||(4420566-4420599)
chr6 (57-98)||(8349734-8349775)
chr6 (55-116)||(9093608-9093669)
chr6 (65-118)||(9732443-9732496)
chr6 (55-116)||(10150304-10150365)
chr6 (55-116)||(11340677-11340738)
chr6 (55-88)||(24836279-24836312)
chr6 (55-88)||(29940753-29940786)
chr6 (61-118)||(32386613-32386670)
chr6 (48-116)||(3204594-3204662)
chr6 (56-88)||(7713983-7714015)
chr6 (49-113)||(7785797-7785861)
chr6 (55-103)||(24782016-24782064)
chr6 (60-116)||(25100005-25100061)
chr6 (52-80)||(28531629-28531657)
chr6 (55-115)||(28660813-28660873)
[»] chr4 (43 HSPs)
chr4 (47-116)||(2996522-2996591)
chr4 (47-116)||(3175900-3175969)
chr4 (40-116)||(17884010-17884086)
chr4 (55-112)||(10192241-10192298)
chr4 (55-118)||(25885816-25885879)
chr4 (56-112)||(18630638-18630694)
chr4 (55-111)||(42321936-42321992)
chr4 (52-116)||(49085943-49086007)
chr4 (55-115)||(49219096-49219156)
chr4 (56-116)||(52746892-52746952)
chr4 (58-105)||(46013363-46013410)
chr4 (55-116)||(437484-437545)
chr4 (55-108)||(4071839-4071892)
chr4 (55-116)||(24160547-24160608)
chr4 (47-116)||(51630060-51630129)
chr4 (55-116)||(53626733-53626794)
chr4 (55-116)||(55870393-55870454)
chr4 (66-118)||(927260-927312)
chr4 (55-115)||(24929450-24929510)
chr4 (56-116)||(46796976-46797036)
chr4 (63-118)||(32920450-32920505)
chr4 (58-105)||(46247178-46247225)
chr4 (57-116)||(52735081-52735140)
chr4 (56-115)||(56480306-56480365)
chr4 (65-115)||(6927546-6927596)
chr4 (55-112)||(8422895-8422950)
chr4 (63-109)||(13949903-13949949)
chr4 (49-115)||(27043883-27043949)
chr4 (126-188)||(37575906-37575968)
chr4 (55-116)||(8130131-8130192)
chr4 (55-116)||(11802491-11802552)
chr4 (57-118)||(18628593-18628654)
chr4 (62-115)||(22471295-22471348)
chr4 (55-116)||(23459585-23459646)
chr4 (61-110)||(25434518-25434567)
chr4 (55-116)||(30207623-30207683)
chr4 (47-80)||(41701529-41701562)
chr4 (55-116)||(43372021-43372082)
chr4 (60-116)||(24371005-24371061)
chr4 (55-118)||(27623592-27623658)
chr4 (60-116)||(42685386-42685442)
chr4 (55-115)||(50745957-50746017)
chr4 (48-80)||(54277402-54277434)
[»] chr7 (34 HSPs)
chr7 (52-116)||(1417218-1417282)
chr7 (47-109)||(29274888-29274952)
chr7 (58-115)||(30456503-30456560)
chr7 (61-115)||(31338471-31338525)
chr7 (55-116)||(5006561-5006622)
chr7 (44-112)||(5373171-5373239)
chr7 (68-116)||(29278629-29278677)
chr7 (55-114)||(49060497-49060556)
chr7 (66-112)||(28340452-28340498)
chr7 (55-116)||(9527142-9527203)
chr7 (55-108)||(28613594-28613647)
chr7 (55-112)||(45813236-45813293)
chr7 (60-116)||(27548225-27548281)
chr7 (55-103)||(35536064-35536112)
chr7 (153-201)||(36537973-36538021)
chr7 (69-128)||(44821930-44821990)
chr7 (57-116)||(21453253-21453312)
chr7 (55-110)||(25511584-25511639)
chr7 (55-118)||(34083575-34083638)
chr7 (55-98)||(39591537-39591580)
chr7 (52-111)||(45777228-45777287)
chr7 (61-110)||(946715-946764)
chr7 (52-109)||(5010527-5010584)
chr7 (63-116)||(12110325-12110378)
chr7 (65-118)||(15309615-15309668)
chr7 (55-116)||(17989075-17989136)
chr7 (44-77)||(20526392-20526425)
chr7 (55-100)||(31341151-31341196)
chr7 (58-115)||(38010674-38010731)
chr7 (55-112)||(48157176-48157233)
chr7 (55-115)||(1418388-1418448)
chr7 (44-116)||(28340896-28340968)
chr7 (58-118)||(29363478-29363538)
chr7 (55-115)||(30496661-30496721)
[»] chr8 (28 HSPs)
chr8 (52-118)||(34551074-34551140)
chr8 (59-116)||(34770853-34770910)
chr8 (55-116)||(42597358-42597419)
chr8 (57-118)||(30627952-30628013)
chr8 (65-116)||(6864511-6864562)
chr8 (52-115)||(38561680-38561743)
chr8 (63-116)||(6509355-6509408)
chr8 (55-112)||(29699211-29699268)
chr8 (52-100)||(8066909-8066957)
chr8 (62-118)||(12361156-12361212)
chr8 (61-116)||(26473804-26473860)
chr8 (55-102)||(8823459-8823506)
chr8 (52-91)||(20672726-20672765)
chr8 (59-110)||(45071163-45071214)
chr8 (55-89)||(14482159-14482193)
chr8 (61-118)||(35534663-35534718)
chr8 (57-118)||(787156-787217)
chr8 (56-113)||(2093237-2093294)
chr8 (75-116)||(7645955-7645996)
chr8 (65-113)||(35928750-35928799)
chr8 (66-122)||(447357-447413)
chr8 (55-115)||(1470909-1470969)
chr8 (55-103)||(7026688-7026736)
chr8 (55-103)||(7853363-7853411)
chr8 (56-88)||(11000641-11000673)
chr8 (47-99)||(29056060-29056112)
chr8 (127-199)||(31884632-31884703)
chr8 (57-109)||(44168517-44168569)
[»] chr3 (38 HSPs)
chr3 (58-116)||(31337453-31337511)
chr3 (55-113)||(48397603-48397661)
chr3 (55-116)||(1816540-1816601)
chr3 (55-116)||(10101528-10101589)
chr3 (55-116)||(10212453-10212514)
chr3 (44-116)||(3365351-3365423)
chr3 (55-119)||(33882985-33883049)
chr3 (55-115)||(48323778-48323838)
chr3 (55-118)||(237354-237417)
chr3 (55-116)||(28306115-28306176)
chr3 (60-113)||(35364254-35364307)
chr3 (59-116)||(36646434-36646491)
chr3 (55-116)||(42084303-42084364)
chr3 (56-113)||(48364934-48364991)
chr3 (57-116)||(23530236-23530296)
chr3 (58-118)||(32555031-32555091)
chr3 (153-201)||(53735929-53735977)
chr3 (49-88)||(39971270-39971309)
chr3 (73-116)||(42530490-42530533)
chr3 (55-114)||(44061077-44061136)
chr3 (55-114)||(51197790-51197848)
chr3 (55-116)||(1217852-1217911)
chr3 (127-185)||(47132033-47132091)
chr3 (55-116)||(10357390-10357451)
chr3 (47-80)||(20192694-20192727)
chr3 (47-116)||(22232775-22232844)
chr3 (55-116)||(24235735-24235796)
chr3 (55-112)||(30956682-30956739)
chr3 (55-112)||(30972494-30972551)
chr3 (55-116)||(33405219-33405280)
chr3 (55-116)||(37788817-37788878)
chr3 (55-96)||(42808936-42808977)
chr3 (55-87)||(905051-905083)
chr3 (55-115)||(1395628-1395688)
chr3 (64-116)||(21872323-21872375)
chr3 (57-105)||(26599137-26599185)
chr3 (58-118)||(31713949-31714008)
chr3 (56-116)||(40122805-40122864)
[»] chr1 (42 HSPs)
chr1 (54-116)||(30371104-30371166)
chr1 (55-116)||(49517027-49517088)
chr1 (47-115)||(40304107-40304175)
chr1 (58-116)||(27738232-27738290)
chr1 (47-116)||(1393071-1393140)
chr1 (55-116)||(4200186-4200247)
chr1 (55-116)||(28467359-28467420)
chr1 (55-115)||(34179925-34179985)
chr1 (55-118)||(6933011-6933074)
chr1 (56-115)||(7218127-7218186)
chr1 (56-111)||(36151562-36151617)
chr1 (67-116)||(25006086-25006135)
chr1 (55-88)||(50319249-50319282)
chr1 (55-115)||(7273992-7274052)
chr1 (55-107)||(15360851-15360903)
chr1 (55-114)||(17422992-17423052)
chr1 (55-115)||(46980182-46980242)
chr1 (56-116)||(47002926-47002986)
chr1 (61-116)||(4548684-4548739)
chr1 (61-116)||(5592737-5592792)
chr1 (47-90)||(6265043-6265086)
chr1 (55-114)||(28689508-28689567)
chr1 (55-118)||(36070207-36070270)
chr1 (55-118)||(48064266-48064329)
chr1 (55-114)||(49557098-49557157)
chr1 (58-116)||(17269210-17269268)
chr1 (58-111)||(3062960-3063013)
chr1 (59-116)||(5421972-5422029)
chr1 (59-116)||(10581129-10581186)
chr1 (55-88)||(14737785-14737818)
chr1 (55-116)||(25479538-25479599)
chr1 (63-116)||(33186009-33186062)
chr1 (56-125)||(43420216-43420285)
chr1 (55-115)||(44940300-44940358)
chr1 (55-96)||(46499926-46499967)
chr1 (55-115)||(10089666-10089725)
chr1 (68-116)||(25005849-25005897)
chr1 (55-103)||(25707117-25707164)
chr1 (58-118)||(33527197-33527257)
chr1 (55-115)||(38578484-38578544)
chr1 (44-104)||(45990122-45990182)
chr1 (55-111)||(52059844-52059900)
[»] scaffold0092 (1 HSPs)
scaffold0092 (52-118)||(40185-40251)
[»] chr5 (32 HSPs)
chr5 (55-116)||(12407713-12407774)
chr5 (55-116)||(18704088-18704148)
chr5 (55-115)||(4855655-4855715)
chr5 (55-120)||(10303758-10303821)
chr5 (58-116)||(32172613-32172671)
chr5 (60-118)||(36539708-36539766)
chr5 (62-116)||(41277402-41277456)
chr5 (55-116)||(14295463-14295524)
chr5 (52-116)||(39823173-39823237)
chr5 (61-116)||(10272483-10272538)
chr5 (55-110)||(28586824-28586879)
chr5 (65-116)||(34205206-34205257)
chr5 (55-118)||(42181142-42181205)
chr5 (60-118)||(9202798-9202856)
chr5 (155-201)||(14599329-14599375)
chr5 (59-116)||(18543248-18543306)
chr5 (58-116)||(40159779-40159837)
chr5 (55-116)||(41957503-41957562)
chr5 (55-96)||(32969189-32969230)
chr5 (55-127)||(37526239-37526312)
chr5 (55-127)||(37588400-37588473)
chr5 (55-87)||(11615465-11615497)
chr5 (56-88)||(11667121-11667153)
chr5 (56-116)||(16889693-16889753)
chr5 (56-116)||(18857452-18857512)
chr5 (44-80)||(29590828-29590864)
chr5 (63-115)||(32059642-32059694)
chr5 (55-87)||(35095864-35095896)
chr5 (65-116)||(36318740-36318792)
chr5 (57-117)||(39750102-39750162)
chr5 (55-115)||(42583106-42583166)
chr5 (55-115)||(42646872-42646932)
[»] scaffold0024 (1 HSPs)
scaffold0024 (55-115)||(27533-27593)
[»] scaffold0053 (1 HSPs)
scaffold0053 (52-118)||(5640-5706)
[»] scaffold0049 (1 HSPs)
scaffold0049 (52-115)||(58146-58209)
[»] scaffold0549 (2 HSPs)
scaffold0549 (55-116)||(1776-1837)
scaffold0549 (55-116)||(3866-3927)
[»] scaffold0508 (1 HSPs)
scaffold0508 (55-115)||(9828-9888)


Alignment Details
Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 14 - 201
Target Start/End: Original strand, 40145386 - 40145565
Alignment:
Q  14 cttataatataagtggttatgtgtattgtgtatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    ||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145386 cttatcatataagtggttatgtgtattgtgtatgcta--------acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 40145477  T
Q  114 aagttttctggagaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtt 201  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40145478 aagctttctggagaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtgtt 40145565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 11513858 - 11513916
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataag 11513916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 33942112 - 33942168
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttgttttcataag 33942168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 118
Target Start/End: Complemental strand, 35755602 - 35755552
Alignment:
Q  68 aaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  35755602 aaaataaagtcaaattgttttcatgtaagctataagttgttttcataagtt 35755552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 10143129 - 10143190
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||| |||||||  ||||||||| |||| |||||||| ||||||||||    
T  10143129 tataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataag 10143190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 10563671 - 10563610
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||  ||| ||| || |||||||| ||||||||||||||||||||||||||    
T  10563671 tataacaaaagatagtatatagtgaaattgtttttttgtaagttataagttgttttcataag 10563610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 28933773 - 28933842
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||||||||||| || |||| || |||| || |||||||||| |||||||||||||    
T  28933773 gctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataag 28933842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 14666506 - 14666562
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||||||||||||||||||||||||  || ||| || ||||||||||||||||||||    
T  14666506 ataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttca 14666562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 29300591 - 29300663
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||| || || || ||||||||||||||||   | ||||||| |||||||||||||||||||||||||||    
T  29300591 tatgctatttctacaataaaagataaaataaaggtgaattgttttcatgtaagttataagttgttttcataag 29300663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 1493626 - 1493564
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagt 117  Q
    |||||||| ||||||||||||||| ||||||||| || |||| |||| | |||||||||||||    
T  1493626 tataacaatagataaaataaagtctagttgttttcatataagctatatgctgttttcataagt 1493564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 3673764 - 3673822
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    |||||||||| |||||||||||| || ||||||| || ||||||||||||| |||||||    
T  3673764 tataacaaaatataaaataaagttaaattgttttcatataagttataagtttttttcat 3673822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 39567860 - 39567926
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttc 121  Q
    ||||||||||||||||||||||| || ||||||  |  |||| |||||| |||||||||||||||||    
T  39567860 tataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataagttttc 39567926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 43299524 - 43299454
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagt-tataagttgttttcataag 116  Q
    |||| |||||||||| ||||||||||||||||||  ||||||| | ||| | |||||||||||||||||||    
T  43299524 gctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataag 43299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 6988072 - 6988133
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||| || ||||  |   ||||||||||||||||||||||    
T  6988072 tataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataag 6988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 15377714 - 15377783
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||| |||| |||| ||||||||||||| |  ||||||| || ||||||||||| ||||||||||||    
T  15377714 gctacttctataccaaaggataaaataaagttagattgttttcatataagttataagctgttttcataag 15377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 39621989 - 39622050
Alignment:
Q  126 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaaca 187  Q
    ||||||||| ||||||||||||||  | ||| |||||||||||  |||||||||||||||||    
T  39621989 gaaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaaca 39622050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 550467 - 550523
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||||||||||||||  ||  ||| ||||||| ||||||||||    
T  550467 acaaaagataaaataaagtcaagttgtttccatacaagatataagtagttttcataa 550523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 5133729 - 5133792
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||||||||  ||  ||||||||| |||| |||||| |||||||| |||||    
T  5133729 tataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagtt 5133792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 36114636 - 36114581
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    ||||||||||||||||||||||| || |||||||| | ||||  ||||||||||||    
T  36114636 tataacaaaagataaaataaagttaaattgtttttgtataagcaataagttgtttt 36114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 36863732 - 36863677
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||    ||||||| |||||||||| |||||||||||||    
T  36863732 aaaagataaaataaagtcaaacaatttttatataagttataaattgttttcataag 36863677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 4550735 - 4550793
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||| |||||||||||||| |||||| |||||| || |||  |||||||||||||||||    
T  4550735 ataataaaagataaaataacgtcaagctgttttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 5043666 - 5043612
Alignment:
Q  62 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||  |||||| || |||| || ||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataag 5043612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 6546935 - 6546981
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttata 101  Q
    |||||||||||||||||||||||||| |||||| ||| |||| ||||    
T  6546935 tataacaaaagataaaataaagtcaaattgtttatatataagctata 6546981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 10494630 - 10494688
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| ||||||||||||| || |||||||| | || | |||||||||||||||||||||    
T  10494630 caaatgataaaataaagtgaaattgtttttgtttatggtataagttgttttcataagtt 10494688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 37053551 - 37053609
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    ||||||| || |||||||||||||||  |||||| || ||||||||||||| |||||||    
T  37053551 tataacagaaaataaaataaagtcaaactgttttcatataagttataagtttttttcat 37053609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 39929824 - 39929874
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 105  Q
    |||||||||||||||||| || |||| |||||||||| |||| ||||||||    
T  39929824 tataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 11344397 - 11344340
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||||||||||||||| |||||||| ||||||| ||  ||| ||||| |||||||||    
T  11344397 tataacaaaagataaaagaaagtcaaattgttttcatacaagctataaattgttttca 11344340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 14299664 - 14299615
Alignment:
Q  125 agaaataagcggaaaacaatttatggttatgttataagttgtttcgataa 174  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||| ||||    
T  14299664 agaaataagctgaaaacaatgtatggatatgtcataagttgtttccataa 14299615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 17952814 - 17952753
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||||||  | |||| || |||| || ||| ||||||||||||    
T  17952814 tataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataag 17952753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 19978013 - 19978046
Alignment:
Q  154 tgttataagttgtttcgataagttctctcaaaca 187  Q
    |||||||||||||||| |||||||||||||||||    
T  19978013 tgttataagttgtttctataagttctctcaaaca 19978046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 22681295 - 22681238
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||| |||| ||| ||||||| || |||| |||||| |||||||||||    
T  22681295 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataa 22681238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 40758981 - 40759014
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgttttt 89  Q
    ||||||||||||||||||||||||| ||||||||    
T  40758981 ataacaaaagataaaataaagtcaaattgttttt 40759014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 42592296 - 42592357
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||| |||| || ||||||| || |||| |||||| ||||||||||||    
T  42592296 tataccaaaagataaaattaagttaacttgttttcatataagctataagctgttttcataag 42592357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 42817489 - 42817428
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||| |||||||| |||||| || ||||| ||||  ||||||||||||    
T  42817489 tataccaaaagataaaatgaagtcaagctgttttcatataagtaataaactgttttcataag 42817428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 2227129 - 2227177
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttt 109  Q
    ||||||||||||||| | || |||||||| |||| ||||||||||||||    
T  2227129 aaaagataaaataaaataaaattgtttttgtgtatgttataagttgttt 2227177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 5045270 - 5045238
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttt 87  Q
    ||||||||||||||||||||||||||| |||||    
T  5045270 tataacaaaagataaaataaagtcaagctgttt 5045238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 10285310 - 10285366
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||||||| |||||||| ||||| | | |||||| |||| ||||||||||||||    
T  10285310 tataacaaaagttaaaataatgtcaaataggttttatataagctataagttgttttc 10285366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 13189472 - 13189440
Alignment:
Q  83 tgtttttatgtaagttataagttgttttcataa 115  Q
    |||||| ||||||||||||||||||||||||||    
T  13189472 tgttttcatgtaagttataagttgttttcataa 13189440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 23143089 - 23143029
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagt 117  Q
    |||||||||||||||| || |||| |||||||  | |||| ||| ||||||||||||||||    
T  23143089 taacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataagt 23143029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 23554879 - 23554819
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagt 117  Q
    |||||||||||||||| || |||| |||||||  | |||| ||| ||||||||||||||||    
T  23554879 taacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataagt 23554819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 33197352 - 33197320
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttt 87  Q
    |||||||||||||| ||||||||||||||||||    
T  33197352 tataacaaaagatagaataaagtcaagttgttt 33197320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 33256690 - 33256758
Alignment:
Q  48 ctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| |||||||| |||||||||||||||||  |||||| || |||  ||||||  |||||||||||    
T  33256690 ctacttctataacaatagataaaataaagtcaaactgttttcatataaactataagcagttttcataag 33256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 33944568 - 33944620
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    |||| ||||||||||||||| ||||||| || |||| ||||| ||||||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 37276722 - 37276766
Alignment:
Q  74 aagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||  |||||| || ||||||||||||||||||||||||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagtt 37276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 41852013 - 41851969
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataa 102  Q
    ||||||||||||||| ||||||| ||||||| || ||||||||||    
T  41852013 aacaaaagataaaattaagtcaaattgttttcatataagttataa 41851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 42621593 - 42621649
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||| ||  |  |||| || ||||||||||||||||||||||||    
T  42621593 caaaagataaaataaagccatatcattttcatataagttataagttgttttcataag 42621649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Original strand, 43199197 - 43199225
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaa 80  Q
    |||||||||||||||||||||||||||||    
T  43199197 ttatataacaaaagataaaataaagtcaa 43199225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 4006671 - 4006732
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||| |||||||||||||||| |||||||||| |||| |||||||||||||||||||    
T  4006671 tataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataag 4006732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 281961 - 281900
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||| ||| ||||||||    
T  281961 tataacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataag 281900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 33787858 - 33787795
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||| |||||| |||||||| ||| ||| || ||||||||||| ||||||||||||||    
T  33787858 tataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagtt 33787795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 5551411 - 5551453
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgttttt 89  Q
    |||| ||||||||||||||||||||||||||||| ||||||||    
T  5551411 gctatttatataacaaaagataaaataaagtcaaattgttttt 5551453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 11363475 - 11363426
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    ||||||||||||||||| || || |||| |||||||||||||||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttgtttt 11363426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 29274342 - 29274281
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||||||||||| ||||||| || |||| |||||  ||||||||||||    
T  29274342 tatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 33817879 - 33817823
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaa-gttataagttgttttcataag 116  Q
    ||||||||||||||||| ||  |||||| |||||| |||||||||||||||||||||    
T  33817879 aaaagataaaataaagtaaacctgttttcatgtaaagttataagttgttttcataag 33817823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 9582711 - 9582668
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagtt 98  Q
    ||||||||||||||||||||||| || |||||||||| ||||||    
T  9582711 tataacaaaagataaaataaagtgaaattgtttttatataagtt 9582668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 14492259 - 14492322
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| ||||||||||||| ||||||| ||||||| ||  ||| |||||| ||||||||||||||    
T  14492259 tataccaaaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataagtt 14492322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 22742323 - 22742386
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||| |||||||||||||||| ||||||| || |||| |||||| | |||| |||||||    
T  22742323 tataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttttataagtt 22742386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 4247189 - 4247111
Alignment:
Q  40 tgtgtatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||| |||| || ||||||||||||||||||| |||     |||||| || ||||||||||| ||||||||||||||    
T  4247189 tgtgtaagctatttctataacaaaagataaaatagagttggtctgttttcatataagttataagctgttttcataagtt 4247111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 31776377 - 31776327
Alignment:
Q  66 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| |||||||| | ||| | ||||||||||||||||||    
T  31776377 ataaaataaagtcaaattgtttttgtataattaataagttgttttcataag 31776327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 1402953 - 1403014
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| ||  | |||| || |||| ||||| |||||||||||||    
T  1402953 tataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataag 1403014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 2727969 - 2727908
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||  ||| |||| |||| || || |||| |||||||||||||||||||    
T  2727969 tataacaaaagataaacaaaaatcaaattgtattgatataagctataagttgttttcataag 2727908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 2735026 - 2735087
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || || ||||| | |||  |||||| ||||||||||||    
T  2735026 tataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataag 2735087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 4420566 - 4420599
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaa 80  Q
    ||||||| ||||||||||||||||||||||||||    
T  4420566 gctacttctataacaaaagataaaataaagtcaa 4420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 8349775 - 8349734
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagtt 98  Q
    ||||||||||||||||||||| || |||||||||| ||||||    
T  8349775 taacaaaagataaaataaagttaaattgtttttatataagtt 8349734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 9093669 - 9093608
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| |||||||||||||||||| || |||||||  | |||| |||||| ||||||||||||    
T  9093669 tatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataag 9093608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 9732443 - 9732496
Alignment:
Q  65 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||| ||||||| ||||||| ||| ||| ||||||||||||||| |||||    
T  9732443 gataaaattaagtcaaattgttttcatgcaaggtataagttgttttcacaagtt 9732496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 10150365 - 10150304
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||| ||||||| || |||| ||||||| || | ||||||||| ||||||||||||    
T  10150365 tataacaaaatataaaatcaaatcaaattgttttcatatcagttataagatgttttcataag 10150304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 11340738 - 11340677
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  11340738 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 11340677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 24836312 - 24836279
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttt 88  Q
    |||||||||||||||||||||||||| |||||||    
T  24836312 tataacaaaagataaaataaagtcaaattgtttt 24836279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 29940753 - 29940786
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttt 88  Q
    |||||||||||||||||||||||||| |||||||    
T  29940753 tataacaaaagataaaataaagtcaatttgtttt 29940786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 32386670 - 32386613
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||| ||||| ||||||| || |||| |||| ||||||||||| ||||    
T  32386670 aaaagataaaataaggtcaaattgttttcatataaggtatacgttgttttcattagtt 32386613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 3204662 - 3204594
Alignment:
Q  48 ctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| ||||| |||||||||||||||||| |  |||||| || |||| || || |||||||||||||    
T  3204662 ctacttctataataaaagataaaataaagtcgaactgttttcatataagctagaaattgttttcataag 3204594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 7713983 - 7714015
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttt 88  Q
    ||||||||||||||||||||||||| |||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgtttt 7714015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 7785861 - 7785797
Alignment:
Q  49 tacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    |||||||||| |||||||||||||||||||||  | |||| || |||| ||||| |||| |||||    
T  7785861 tacttatataccaaaagataaaataaagtcaaactcttttcatataagctataaattgtcttcat 7785797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 24782016 - 24782064
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 103  Q
    |||||||||||||||||| || |||| ||||||| || |||||||||||    
T  24782016 tataacaaaagataaaatcaaatcaaattgttttcatataagttataag 24782064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 25100005 - 25100061
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||| || ||||| |||||| ||||||| ||  |||||||||||||||||||||||    
T  25100005 caaaatatgaaatagagtcaaattgttttcatagaagttataagttgttttcataag 25100061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 80
Target Start/End: Complemental strand, 28531657 - 28531629
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaa 80  Q
    |||||||||||||||||||||||||||||    
T  28531657 ttatataacaaaagataaaataaagtcaa 28531629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 28660873 - 28660813
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||| |||||||||||||| || || |||| || ||| |||||| ||||||||||||    
T  28660873 tataacaatagataaaataaagttaaattattttcatataaattataaattgttttcataa 28660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 2996522 - 2996591
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||  |||||| ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  2996522 gctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataag 2996591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 3175900 - 3175969
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||| |||| ||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||    
T  3175900 gctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataag 3175969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 17884010 - 17884086
Alignment:
Q  40 tgtgtatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| |||| || ||||||||||||||||||||||| || |||||||| | |||||||| |||||||||||||||    
T  17884010 tgtgtaagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataag 17884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 10192241 - 10192298
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||    
T  10192241 tataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttca 10192298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 25885816 - 25885879
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| |||||||||||||||||| || |||||||  |||||| |||||||||||||||||||||    
T  25885816 tatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataagtt 25885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 112
Target Start/End: Original strand, 18630638 - 18630694
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||||||||||||||||||||||| | ||||| || |||| |||||||||||||||    
T  18630638 ataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttca 18630694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 42321992 - 42321936
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||||| |||||||||||||||| ||||||| || ||| |||||||||||||||    
T  42321992 tataacaaatgataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 49085943 - 49086007
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| |||||  | |||| ||  |||||||||||||||||||||||    
T  49085943 ttatataacaaaagataaaataatgtcaaactattttcatacaagttataagttgttttcataag 49086007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 49219096 - 49219156
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||| ||||||||||||||| || |||| || |||| ||||||||||||||||||    
T  49219096 tataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataa 49219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 52746952 - 52746892
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||| || |||||||| ||||||  ||||| ||||||||||||    
T  52746952 ataacaaaagataaaataaagttaaattgtttttgtgtaagccataagctgttttcataag 52746892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 105
Target Start/End: Complemental strand, 46013410 - 46013363
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 105  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||    
T  46013410 aacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 437545 - 437484
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| |||||||||||||||||| || |||| || || |||||| |||||||||||||||||    
T  437545 tatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataag 437484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 4071839 - 4071892
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtt 108  Q
    |||||||||||||||||||||||||| || |||| || |||| |||||||||||    
T  4071839 tataacaaaagataaaataaagtcaaattattttcatataagctataagttgtt 4071892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 24160608 - 24160547
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| ||||| ||||  | |||| ||||||| |||||||||||||||||||    
T  24160608 tataacaaaagataatataaattcaaactattttcatgtaagctataagttgttttcataag 24160547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 51630060 - 51630129
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||| |||||||||||||||||| || ||||||| || |||| |||||| | ||||||||||    
T  51630060 gctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataag 51630129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 53626733 - 53626794
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||| ||||  |||||| || |||| |||||| ||||||||||||    
T  53626733 tataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataag 53626794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 55870454 - 55870393
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||| ||||||||||||  |||||| |  |||| |||||||||||||||||||    
T  55870454 tataacaaaagatcaaataaagtcaaactgttttcacataagctataagttgttttcataag 55870393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 927260 - 927312
Alignment:
Q  66 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||| ||||||  || ||||||||||||||||||| ||||||    
T  927260 ataaaataaagtcaaattgtttccatataagttataagttgttttcttaagtt 927312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 24929450 - 24929510
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||||||||| |  |||||| ||  ||| ||||||||||||||||||    
T  24929450 tataacaaaagataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 46796976 - 46797036
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||| ||||||||||| ||||  |||||  || ||||||||||||||||||||||||    
T  46796976 ataacaaacgataaaataaattcaatatgtttccatataagttataagttgttttcataag 46797036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 32920505 - 32920450
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||||||| | ||||| ||  ||| |||||||||||||||||||||    
T  32920505 aagataaaataaagtcaaatcgttttaatagaagctataagttgttttcataagtt 32920450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 46247178 - 46247225
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 105  Q
    |||||||||||||||||||||||  ||||||||| ||| |||||||||    
T  46247178 aacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 52735081 - 52735140
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||| ||  ||| || ||||||||| ||||||||| ||||    
T  52735081 taacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaag 52735140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 56480306 - 56480365
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||| |||||||||| || |||||| | | ||||||||||| |||||||||||    
T  56480306 ataacaaaagacaaaataaagttaaattgtttatgtataagttataagctgttttcataa 56480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 6927596 - 6927546
Alignment:
Q  65 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||| || ||||||| ||||||  ||||||||||||||||||    
T  6927596 gataaaataaagttaaattgttttcatgtaaactataagttgttttcataa 6927546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 8422950 - 8422895
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||| |||||||||||||||||||  ||||||| || |||| |||||||||||||||    
T  8422950 tataaaaaaagataaaataaagtca--ttgttttcatataagctataagttgttttca 8422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 13949949 - 13949903
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttt 109  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgttt 13949903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 27043949 - 27043883
Alignment:
Q  49 tacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||| ||||||||||||| || |||||||  | |||| |||||| |||||| ||||    
T  27043949 tacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataa 27043883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 37575968 - 37575906
Alignment:
Q  126 gaaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaa 188  Q
    ||||| ||| |||||||| |||||  ||||||||||||| |||  ||||||||||||||||||    
T  37575968 gaaatgagctgaaaacaacttatgagtatgttataagttattttcataagttctctcaaacaa 37575906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 8130131 - 8130192
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| |||||||||| || |||| || |||| |||||  ||||||||||||    
T  8130131 tataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 11802491 - 11802552
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||| || || | |  |||| || ||||||||||||||||    
T  11802491 tataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataag 11802552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 18628654 - 18628593
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||  |||||| ||||||  ||||||||| ||||||||||  ||||||||||||||    
T  18628654 taacaaaaggaaaaatatagtcaaactgtttttatataagttataaactgttttcataagtt 18628593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 22471295 - 22471348
Alignment:
Q  62 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||| ||||| |||  |||||| || |||||||||||||||||||||||    
T  22471295 aaagataaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 23459585 - 23459646
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||| |||| ||||||||||  | |||| |||||| ||||||||||||    
T  23459585 tatagcaaaagataaaatgaagttaagttgttttcttataagctataagctgttttcataag 23459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Complemental strand, 25434567 - 25434518
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    ||||||||||||||||||||  |||||| || |||| |||||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttgtttt 25434518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 30207683 - 30207623
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||| |||||||||| ||||  |||||| || |||| |||||||||||||||||||    
T  30207683 tataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttgttttcataag 30207623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 41701562 - 41701529
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaa 80  Q
    |||| |||||||||||||||||||||||||||||    
T  41701562 gctatttatataacaaaagataaaataaagtcaa 41701529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 43372082 - 43372021
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||| ||||||  ||||||||| |||| |||||  || |||||||||    
T  43372082 tataacaaaagataaaatacagtcaaactgtttttatataagctataaactgatttcataag 43372021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 24371061 - 24371005
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||| |||| ||| |||||   ||| |||||||||||||||||||    
T  24371061 caaaagataaaataaattcaaattgcttttacaaaagctataagttgttttcataag 24371005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 27623592 - 27623658
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttat---aagttgttttcataagtt 118  Q
    ||||||||||||||||||||||||||  | |||| || |||| |||   ||||||||||||||||||    
T  27623592 tataacaaaagataaaataaagtcaaactattttaatataagctataagaagttgttttcataagtt 27623658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 42685386 - 42685442
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||| |||| || |||||||| | |||| | |||||||||||||||||    
T  42685386 caaaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataag 42685442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 50745957 - 50746017
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||||||||| ||||  ||||||||| |||  || |||||||||| ||||    
T  50745957 tataacaaaagataaaataaaatcaaactgtttttatataaactacaagttgtttttataa 50746017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 54277434 - 54277402
Alignment:
Q  48 ctacttatataacaaaagataaaataaagtcaa 80  Q
    |||||| ||||||||||||||||||||||||||    
T  54277434 ctacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 1417218 - 1417282
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||  ||||||||||||||||||    
T  1417218 ttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataag 1417282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 109
Target Start/End: Original strand, 29274888 - 29274952
Alignment:
Q  47 gctacttatataacaaaagataaaa--taaagtcaagttgtttttatgtaagttataagttgttt 109  Q
    ||||||| |||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||    
T  29274888 gctacttttataacaaaagataaaaaataaagtcaaattgtttctatgtaagttataagttgttt 29274952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 30456560 - 30456503
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||||||||||| ||||||| || |||||||||||| ||||||||||    
T  30456560 aacaaaagataaaataaagtcaaattgttttcatataagttataagtggttttcataa 30456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 31338471 - 31338525
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||    
T  31338471 aaaagataaaataaagtcaaactgtttttatataagttataagttgtttccataa 31338525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 5006622 - 5006561
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||||||  |||||| || |||| ||||| |||||||||||||    
T  5006622 tataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataag 5006561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 5373171 - 5373239
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||||| || |||||||||||||||||||||||| |    ||||||| ||||||||||||||||||||    
T  5373171 tatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttgttttca 5373239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 29278629 - 29278677
Alignment:
Q  68 aaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||||    
T  29278629 aaaataaagtcaaattgtttctatgtaagttataagttgtttccataag 29278677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 49060497 - 49060556
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||||||||| ||||||||||||||| || ||||||| |||| |||||||| ||||||||    
T  49060497 tataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 28340498 - 28340452
Alignment:
Q  66 ataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||    
T  28340498 ataaaataaagtcaaactgttttcatgtaagttataagttgttttca 28340452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 9527203 - 9527142
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||| |||||||||||  |||||| || |||  |||||||||||||||||||    
T  9527203 tataacaaaagatataataaagtcaaactgttttcatataaactataagttgttttcataag 9527142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 108
Target Start/End: Complemental strand, 28613647 - 28613594
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtt 108  Q
    ||||||||||||||||| ||||| || |||||||| | ||||||||||||||||    
T  28613647 tataacaaaagataaaacaaagttaaattgtttttgtataagttataagttgtt 28613594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 45813293 - 45813236
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||| ||||||||||||||||||||| ||||||| || |||  |||||||||||||||    
T  45813293 tataccaaaagataaaataaagtcaacttgttttcatataatctataagttgttttca 45813236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 27548225 - 27548281
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||| | ||||||| || |||| |||||| ||||||||||||    
T  27548225 caaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataag 27548281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 35536064 - 35536112
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 103  Q
    ||||||| |||||||||||||||||| ||||||| || |||||||||||    
T  35536064 tataacataagataaaataaagtcaaattgttttcatataagttataag 35536112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Original strand, 36537973 - 36538021
Alignment:
Q  153 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtt 201  Q
    |||| |||||||||||| |||||||||||||||||| |||| |||||||    
T  36537973 atgtcataagttgtttccataagttctctcaaacaatctcacaagtgtt 36538021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 44821930 - 44821990
Alignment:
Q  69 aaataaagtcaagttgtttttatgtaagttataagttgttttcataag-ttttctggagaa 128  Q
    |||||||||||| |||||||| | ||||||||||| |||||||||||| | ||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctattctggagaa 44821990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 116
Target Start/End: Original strand, 21453253 - 21453312
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||| |||||||||||||||| | || |||| |||||  ||||||||||||    
T  21453253 taacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataag 21453312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Original strand, 25511584 - 25511639
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    ||||||||||||| |||||||||||| || ||||||| |||| |||||||| ||||    
T  25511584 tataacaaaagatgaaataaagtcaatttttttttatataagatataagttttttt 25511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 34083638 - 34083575
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| |||||||||||||||||| || |||||| | | |||| |||||| ||||||||||||||    
T  34083638 tatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataagtt 34083575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 39591580 - 39591537
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagtt 98  Q
    |||||||||||||||||||||||||| ||||||| || ||||||    
T  39591580 tataacaaaagataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 45777287 - 45777228
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||||||||||||||||| |||||||  |||||| || |||  ||||||||||||||    
T  45777287 ttatataacaaaagataaaattaagtcaaactgttttcatataaactataagttgttttc 45777228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 946715 - 946764
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    |||||||||||||||||||| |||||||  | | ||||||||||||||||    
T  946715 aaaagataaaataaagtcaaattgttttcgtattagttataagttgtttt 946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 5010584 - 5010527
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttt 109  Q
    |||| |||||||| |||||||||||| || || ||||||| |||| ||||||||||||    
T  5010584 ttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttgttt 5010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 12110325 - 12110378
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||| |||||||  | |||| |||||| ||||||||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataag 12110378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 15309668 - 15309615
Alignment:
Q  65 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||| || |||||||| | || ||| |||||||||||||||||||    
T  15309668 gataaaataaagttaaattgtttttgtatatgttttaagttgttttcataagtt 15309615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 17989136 - 17989075
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||| |||||||||||||||  |||||| || |||  ||||| |||||||||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataag 17989075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 20526392 - 20526425
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagt 77  Q
    ||||||||||||||| ||||||||||||||||||    
T  20526392 tatgctacttatatagcaaaagataaaataaagt 20526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 31341151 - 31341196
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttat 100  Q
    ||||||||||||||||||||||||||  || |||||| ||||||||    
T  31341151 tataacaaaagataaaataaagtcaaactggttttatataagttat 31341196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 38010674 - 38010731
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||| |||| ||| ||||||| || |||| |||||| |||||||||||    
T  38010674 aacaaaagataaaacaaagccaaattgttttcatataagctataagctgttttcataa 38010731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 48157233 - 48157176
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||| ||||||||||||||||| || ||||||| || |||| ||||| |||||||||    
T  48157233 tataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttca 48157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 1418388 - 1418448
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||| |||||||||||  |||||| || |||||| |||| || ||||||||    
T  1418388 tataacaaaagatataataaagtcaatatgttttcatataagttgtaagatggtttcataa 1418448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 28340968 - 28340896
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||| || ||||| ||||||| |||| ||||||| ||||| | || |||| |||||| ||||||||||||    
T  28340968 tatgctatttttataataaaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataag 28340896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 29363478 - 29363538
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| ||||||||||||||||||  |||||| || | ||||||||| |||| |||||||||    
T  29363478 aacagaagataaaataaagtcaaactgttttcatattagttataagctgttatcataagtt 29363538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 30496661 - 30496721
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||| ||||||||||||||| |||||||  | |||  |||| |||||||||||||    
T  30496661 tataacaaaatataaaataaagtcaaattgttttcgtataacctataggttgttttcataa 30496721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 34551074 - 34551140
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||||||| || ||||||| ||||||| || ||||||||||||||||||| ||||||    
T  34551074 ttatataacaaaagataacatcaagtcaaattgttttcatttaagttataagttgttttcttaagtt 34551140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 34770853 - 34770910
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  34770853 acaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataag 34770910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 42597358 - 42597419
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || ||||||| ||| ||| |||||||||||||||||||    
T  42597358 tataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataag 42597419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 30628013 - 30627952
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||||| | || |||||| | |||||| |||||||||||||||||||||    
T  30628013 taacaaaagataaaataaaataaaattgtttatgtgtaagctataagttgttttcataagtt 30627952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 6864562 - 6864511
Alignment:
Q  65 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||  | |||| |||||||||||||||||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataag 6864511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 38561680 - 38561743
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||||||||||||||  | ||||||| ||   ||||||||||||||||||    
T  38561680 ttatataacaaaagataaaataaagtcaaactatttttatctatactataagttgttttcataa 38561743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 6509408 - 6509355
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||| |||| ||||| |||| |||||| ||||||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataag 6509355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 29699211 - 29699268
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    ||||||||||||||||||||||||||  |||| | || ||||||||||| ||||||||    
T  29699211 tataacaaaagataaaataaagtcaaaatgttgtcatctaagttataagctgttttca 29699268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 8066957 - 8066909
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttat 100  Q
    |||||||||||||||||||||||||||||  || |||||| ||||||||    
T  8066957 ttatataacaaaagataaaataaagtcaaactggttttatataagttat 8066909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 12361156 - 12361212
Alignment:
Q  62 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||| ||||||| ||||||| || |||| |||||| ||||||||||||||    
T  12361156 aaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagtt 12361212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 26473860 - 26473804
Alignment:
Q  61 aaaagataaaataaagtcaagttgttttt-atgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| ||||||||||||| || | |||| |||||||||||||||||    
T  26473860 aaaagataaaataaattcaagttgtttttcatatgagttgtaagttgttttcataag 26473804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 8823506 - 8823459
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataa 102  Q
    ||||||||||||||||| |||||||  ||||| |||||||||||||||    
T  8823506 tataacaaaagataaaacaaagtcagattgttcttatgtaagttataa 8823459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Original strand, 20672726 - 20672765
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttat 91  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  20672726 ttatataacaaaagataaaataaagtcaaactgtttttat 20672765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 45071163 - 45071214
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    |||||||| ||||||||||||| |||||||||| |||| |||||| ||||||    
T  45071163 acaaaagacaaaataaagtcaaattgtttttatataagctataagctgtttt 45071214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Original strand, 14482159 - 14482193
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttttt 89  Q
    |||||||||||||||||||||||||| ||||||||    
T  14482159 tataacaaaagataaaataaagtcaaattgttttt 14482193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 35534718 - 35534663
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||| || |||||||  |||| |||||| ||||||||||||||||    
T  35534718 aaaagataaaataaagttaaattgtttt--tgtatgttatatgttgttttcataagtt 35534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 787217 - 787156
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||| |||||||||||||||||| ||||| | || |||| |||||  ||||||||||||||    
T  787217 taacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataagtt 787156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 2093237 - 2093294
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    |||| |||||||||||||||||||| | |||||  | |||| ||||||||||||||||    
T  2093237 ataataaaagataaaataaagtcaaatggttttcttttaagctataagttgttttcat 2093294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 7645955 - 7645996
Alignment:
Q  75 agtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| ||||||| ||||||| |||||||||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataag 7645996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 35928799 - 35928750
Alignment:
Q  65 gataaaataaagtcaagttgttttta-tgtaagttataagttgttttcat 113  Q
    ||||| |||||||||| ||||||||  |||||||||||||||||||||||    
T  35928799 gataacataaagtcaatttgttttttgtgtaagttataagttgttttcat 35928750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 447413 - 447357
Alignment:
Q  66 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttct 122  Q
    |||||||||||| |  ||||||| || |||  |||||||||||||||||||||||||    
T  447413 ataaaataaagttacattgttttcatttaaaatataagttgttttcataagttttct 447357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 1470969 - 1470909
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||| |||||||||||||||||||| ||  ||| || |||| |||||| |||||||||||    
T  1470969 tataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataa 1470909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 7026688 - 7026736
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 103  Q
    ||||||||||||||||||||||| || ||||||| || |||| ||||||    
T  7026688 tataacaaaagataaaataaagtaaaattgttttcatataaggtataag 7026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 7853363 - 7853411
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 103  Q
    |||||||||||||| ||||||||||| ||| |||||| |||| ||||||    
T  7853363 tataacaaaagatataataaagtcaaattgattttatataaggtataag 7853411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Complemental strand, 11000673 - 11000641
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttt 88  Q
    ||||||||||||||||||||||||| |||||||    
T  11000673 ataacaaaagataaaataaagtcaaattgtttt 11000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 29056112 - 29056060
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagtta 99  Q
    ||||||| || | ||||||||||||||||||||| ||||||| || |||||||    
T  29056112 gctacttctagagcaaaagataaaataaagtcaatttgttttcatataagtta 29056060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 31884632 - 31884703
Alignment:
Q  127 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaacaagctcataagtg 199  Q
    |||||||| ||||||| || ||| | ||||||||||||||||||||||| | |||||| | | ||||||||||    
T  31884632 aaataagctgaaaacagtt-atgatcatgttataagttgtttcgataagatatctcaacctatctcataagtg 31884703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Original strand, 44168517 - 44168569
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttt 109  Q
    ||||||||||||||||||||| || ||||||| || |||| ||| ||||||||    
T  44168517 taacaaaagataaaataaagttaatttgttttcatataagatatgagttgttt 44168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 31337511 - 31337453
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||| ||||||||    
T  31337511 aacaaaagataaaataaagtcaaactgtttttatataagttataagttgtattcataag 31337453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 48397603 - 48397661
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    ||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||||    
T  48397603 tataataaaagataaaataaagtcaaattgtttttatttaagctataagttgttttcat 48397661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 1816540 - 1816601
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||| ||||||||||||||||||||  ||||||| | |||| |||||||||||||||||||    
T  1816540 tataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataag 1816601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 10101589 - 10101528
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || ||||||| || |||| || ||||||||||||||||    
T  10101589 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10101528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 10212514 - 10212453
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || ||||||| || |||| || ||||||||||||||||    
T  10212514 tataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataag 10212453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 3365351 - 3365423
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||| || ||||||| |||||||||| |||||||||||||||||| ||| || |||  ||||||||||||    
T  3365351 tatgctatttctataacataagataaaattaagtcaagttgtttttatataaattgtaaactgttttcataag 3365423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 33882985 - 33883049
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttt 119  Q
    ||||||||||||||||||||||| || || |||||||| |||||||||| | |||||||| ||||    
T  33882985 tataacaaaagataaaataaagtgaaattatttttatgcaagttataagctattttcataggttt 33883049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 48323778 - 48323838
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||| ||||||||| |||||||||| |||||||| |||||| ||||| ||||||||||||    
T  48323778 tataataaaagataatataaagtcaaattgtttttctgtaagctataaattgttttcataa 48323838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 237354 - 237417
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||| ||||||||||||| | || || | || |||||||||||||||||||||||||||||    
T  237354 tataacagaagataaaataaaataaaattatattcatgtaagttataagttgttttcataagtt 237417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 28306115 - 28306176
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||  ||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  28306115 tataacaaaaagtaaaataaagtcaaactgttttcatataagttacaagttgttttcataag 28306176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 35364254 - 35364307
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    |||||| ||||||||||| || || ||||||| |||||||||||||||||||||    
T  35364254 caaaaggtaaaataaagttaaattatttttatataagttataagttgttttcat 35364307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 36646491 - 36646434
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||  | ||||||| || |||||||||| |||||||||||||    
T  36646491 acaaaagataaaataaagtataattgttttcatataagttataacttgttttcataag 36646434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 42084364 - 42084303
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||| |||||||||| ||||| ||||||| || |||| ||| |||||||||||||||    
T  42084364 tataacaaaggataaaataatgtcaacttgttttgatataagctattagttgttttcataag 42084303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 48364991 - 48364934
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcat 113  Q
    ||||||||||||||||||||||||| ||||||| || || |  |||||||||||||||    
T  48364991 ataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcat 48364934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 23530296 - 23530236
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgttttt-atgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||| || ||||| || |||  |||||||||||||||||||    
T  23530296 taacaaaagataaaataaagtcaaattatttttcatataaagtataagttgttttcataag 23530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 32555091 - 32555031
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||||||||| || ||||  | |||| |||||||||||||||| ||||    
T  32555091 aacaaaagataaaataaagtcaaattattttcctataagctataagttgttttcatgagtt 32555031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 53735977 - 53735929
Alignment:
Q  153 atgttataagttgtttcgataagttctctcaaacaagctcataagtgtt 201  Q
    |||| |||||||||||| |||||||||||||||||| ||||| ||||||    
T  53735977 atgtcataagttgtttcaataagttctctcaaacaatctcattagtgtt 53735929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 39971270 - 39971309
Alignment:
Q  49 tacttatataacaaaagataaaataaagtcaagttgtttt 88  Q
    |||||||||||||||||||||||||||| ||| |||||||    
T  39971270 tacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 42530490 - 42530533
Alignment:
Q  73 aaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||    
T  42530490 aaagtcaagttgtttttatataagttgtaagatgttttcataag 42530533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 44061136 - 44061077
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||| ||||||||||||||| || || |||||||| | |||| |||||||||||||||||    
T  44061136 tatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcata 44061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 51197848 - 51197790
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||||||||||||| | ||||| ||| ||||||| || ||||||||||||||||||||||    
T  51197848 tataacaaaagataga-taaagacaaattgttttcatataagttataagttgttttcata 51197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 1217911 - 1217852
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||  |||| |||| || ||||||| |||||||||||||| ||||||||||||    
T  1217911 tataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataag 1217852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 47132033 - 47132091
Alignment:
Q  127 aaataagcggaaaacaatttatggttatgttataagttgtttcgataagttctctcaaa 185  Q
    |||||||| ||||||| ||||||| ||||  |||||||||||  |||||||||||||||    
T  47132033 aaataagctgaaaacagtttatggatatgacataagttgttttcataagttctctcaaa 47132091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 10357390 - 10357451
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||| || || || |||| || |||| || ||||||||||||||||    
T  10357390 tataacaaaagataaaataatgttaaatttttttcatataagatacaagttgttttcataag 10357451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 80
Target Start/End: Complemental strand, 20192727 - 20192694
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaa 80  Q
    |||| |||||||||||||||||||||||||||||    
T  20192727 gctatttatataacaaaagataaaataaagtcaa 20192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 22232775 - 22232844
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| |||||||||||| ||||||||||||||||  |||||| || |||||  |||| | ||||||||||    
T  22232775 gctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataag 22232844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 24235796 - 24235735
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| ||||||||||  | |||  || |||| |||||||||||||||||||    
T  24235796 tataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataag 24235735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 30956739 - 30956682
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||| |||||||||||||||||| || |||||||| | || | |||||||||||||||    
T  30956739 tatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30956682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 30972551 - 30972494
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttca 112  Q
    |||| |||||||||||||||||| || |||||||| | || | |||||||||||||||    
T  30972551 tatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttca 30972494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 33405280 - 33405219
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| |||||| ||||||||||| || ||||||| || |||| |||||| ||||||||||||    
T  33405280 tatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataag 33405219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 37788817 - 37788878
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||| | || ||||  | |||  |||||||||||||||||||    
T  37788817 tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataag 37788878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 42808936 - 42808977
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaag 96  Q
    ||||||||||||||||||||||| || |||||||||| ||||    
T  42808936 tataacaaaagataaaataaagttaaattgtttttatataag 42808977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 905083 - 905051
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttt 87  Q
    |||||||||||||||||||||||||| ||||||    
T  905083 tataacaaaagataaaataaagtcaatttgttt 905051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 1395628 - 1395688
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||||||||||| || |||| || |||| ||| |  |||||||||||    
T  1395628 tataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 21872375 - 21872323
Alignment:
Q  64 agataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||| ||||| || |||| || |||| |||||||||||||||||||    
T  21872375 agataaaataaggtcaaatttttttgatataagctataagttgttttcataag 21872323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Original strand, 26599137 - 26599185
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagtt 105  Q
    |||||||||||||||||||||||| | ||||| || |||| ||||||||    
T  26599137 taacaaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 31713949 - 31714008
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||| |||||||||  |||||| ||  ||||||||||||||||| |||||||    
T  31713949 aacaaaagataaa-taaagtcaaactgttttgatacaagttataagttgttttaataagtt 31714008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 40122864 - 40122805
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||  |||||| ||  ||| ||||||||||||| |||||    
T  40122864 ataacaaaagataaaataaagtcaaactgttttcat-aaagctataagttgtttttataag 40122805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 30371104 - 30371166
Alignment:
Q  54 atataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||| |||| ||||||| || |||| |||||||||||||||||||    
T  30371104 atataacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 49517027 - 49517088
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||| ||||||||||||    
T  49517027 tataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataag 49517088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 40304175 - 40304107
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||| |||||||||||||||||||||||| |||  ||||||| || ||||||||||| |||||||||||    
T  40304175 gctatttatataacaaaagataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 27738290 - 27738232
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||| |||||||||||||    
T  27738290 aacaaaagataaaataaagtcaaattgttttcatataagctataatttgttttcataag 27738232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 1393140 - 1393071
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| |||||||||||||| ||||||||||| ||  |||||| |||||||||||||||  ||||||||||    
T  1393140 gctatttatataacaaaagttaaaataaagtaaatctgttttcatgtaagttataagtcattttcataag 1393071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 4200186 - 4200247
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||||||||||| || |||| ||||  |||||||| ||||    
T  4200186 tataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaag 4200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 28467420 - 28467359
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||| || |||| || |||| || ||||||||||||||||    
T  28467420 tataacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataag 28467359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 34179985 - 34179925
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||||||||||| ||||||| || |||| |||||  |||||||||||    
T  34179985 tataacaaaagataaaataaagtcaaattgttttaatctaagctataaactgttttcataa 34179925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 6933074 - 6933011
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||| ||||||||||||||| ||||||| ||  ||||||| |||| ||||||||||||    
T  6933074 tataacaaaacataaaataaagtcaaattgttttcatagaagttattagttcttttcataagtt 6933011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 7218186 - 7218127
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||| ||||| |||||||||||||| ||||||| || |||| ||||||||||||||||||    
T  7218186 ataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataa 7218127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 36151617 - 36151562
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||||||||||||||||||||| |||||||  | |||||||||| ||||||||    
T  36151617 ataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 25006135 - 25006086
Alignment:
Q  67 taaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataag 25006086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 50319249 - 50319282
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttt 88  Q
    ||||||||||||||||||||||||||||||||||    
T  50319249 tataacaaaagataaaataaagtcaagttgtttt 50319282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 7274052 - 7273992
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||| |||||||||||| ||||||| ||  |||||||||| ||||| |||||    
T  7274052 tataacaaaagatgaaataaagtcaaattgttttcatacaagttataagctgtttccataa 7273992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 15360851 - 15360903
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgt 107  Q
    ||||||||||||||||||||||||||  |||||| || |||| ||||||||||    
T  15360851 tataacaaaagataaaataaagtcaaactgttttcatataagctataagttgt 15360903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 17423052 - 17422992
Alignment:
Q  55 tataacaaaa-gataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||||||||| ||||||||||||||||| || ||| || |||| |||||||||||||||||    
T  17423052 tataacaaaacgataaaataaagtcaagctgatttcatataagctataagttgttttcata 17422992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 46980242 - 46980182
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||| ||||||||||||||||| |||  |||||| || |||||||||| ||||||||||||    
T  46980242 tatatcaaaagataaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 47002986 - 47002926
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||| ||||||||||||||||| || ||||||||||  |||||| || |||||||||||||    
T  47002986 ataataaaagataaaataaagttaaattgtttttatacaagttagaaattgttttcataag 47002926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 4548684 - 4548739
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||  |||||||||  |||| ||||| ||||||||||||    
T  4548684 aaaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataag 4548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 5592792 - 5592737
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||| | ||||| | || |||| |||||||||||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataag 5592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 6265043 - 6265086
Alignment:
Q  47 gctacttatataacaaaagataaaataaagtcaagttgttttta 90  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||    
T  6265043 gctacttctataacaaaaaataaaataaagtcaaattgttttta 6265086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 28689567 - 28689508
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    |||| ||||||||||||||||  ||||| ||||| || |||| |||||||||||||||||    
T  28689567 tatatcaaaagataaaataaatgcaagtggttttcatataagctataagttgttttcata 28689508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 36070207 - 36070270
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||||||||| || |||| ||    |||| |||||||||||||||||||||    
T  36070207 tataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataagtt 36070270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 48064266 - 48064329
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||| |||||||||||||||||| ||  | ||||| | |||||||||||||| |||||||||||    
T  48064266 tatagcaaaagataaaataaagtaaaactatttttgtataagttataagttgatttcataagtt 48064329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 49557098 - 49557157
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcata 114  Q
    ||||||||||||||||||||||| || | || || || |||| |||||||||||||||||    
T  49557098 tataacaaaagataaaataaagttaaatagtattcatttaagctataagttgttttcata 49557157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 17269210 - 17269268
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||  ||||||||||||| ||||||| || ||||  ||||||||||||||||||    
T  17269210 aacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataag 17269268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 3062960 - 3063013
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||||||||||||| ||||| |||||||||| |||  |||||| |||||||    
T  3062960 aacaaaagataaaataatgtcaaattgtttttatataaactataagatgttttc 3063013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 5422029 - 5421972
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| |||||| |||||||  | |||| ||||||||||||| |||||    
T  5422029 acaaaagataaaatatagtcaaattgttttcttataagctataagttgttttgataag 5421972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 10581186 - 10581129
Alignment:
Q  59 acaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||| ||||||||||||||||  | |||| || |||| |||||||||||||||||||    
T  10581186 acaaaggataaaataaagtcaaacttttttcatttaagctataagttgttttcataag 10581129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 88
Target Start/End: Complemental strand, 14737818 - 14737785
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttt 88  Q
    |||||||||||||||||||||||||| |||||||    
T  14737818 tataacaaaagataaaataaagtcaaattgtttt 14737785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 25479538 - 25479599
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| ||||||||||||| ||||| |||| || || || | |||||||||||||||||||    
T  25479538 tataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataag 25479599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 33186062 - 33186009
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||| ||| | ||||||||||  ||||||||||||||||| |||||    
T  33186062 aagataaaataaggtcgaattgtttttatacaagttataagttgtttttataag 33186009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 43420216 - 43420285
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagttttctgga 125  Q
    ||||| |||||||||||||||||||  | ||||||| ||||||  ||||| |||||||||| | ||||||    
T  43420216 ataacgaaagataaaataaagtcaaactttttttatataagttgcaagttattttcataagctatctgga 43420285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 44940300 - 44940358
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||| ||||||||||||||||||||   |||||| |  |||||||||||||||||||||||    
T  44940300 tatagcaaaagataaaataaagtcac--tgttttcaaataagttataagttgttttcataa 44940358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 46499967 - 46499926
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaag 96  Q
    ||||| |||||||||||||||||||| |||||||||| ||||    
T  46499967 tataagaaaagataaaataaagtcaaattgtttttatttaag 46499926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 10089666 - 10089725
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||| |||||||||| ||| ||| |||||| |||| ||||||| ||||||||||    
T  10089666 tataacaaaagttaaaataaaggcaaattg-ttttatataagctataagtggttttcataa 10089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 25005897 - 25005849
Alignment:
Q  68 aaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||| ||||||| ||||||| || |||| |||||||||||||||||||    
T  25005897 aaaatgaagtcaacttgttttcatataagctataagttgttttcataag 25005849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 25707117 - 25707164
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataag 103  Q
    |||||||||||||||||||||| | ||||||||| || |||||||||||    
T  25707117 tataacaaaagataaaataaagac-agttgttttcatttaagttataag 25707164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 33527257 - 33527197
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||||| ||||||  |||||| || |||  |||||| ||||||||||||||    
T  33527257 aacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagtt 33527197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 38578484 - 38578544
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||| ||||||| || || ||||| | |||| |||||||||||| |||||    
T  38578484 tataacaaaagataacataaagttaaattatttttgtataagctataagttgtttacataa 38578544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 45990182 - 45990122
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagt 104  Q
    ||||||| || |||| |||||||||||||||||| || ||||||| || |||| |||||||    
T  45990182 tatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 52059844 - 52059900
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttc 111  Q
    ||||||| ||| ||||||||| |||| ||||||| ||||||  ||||||||||||||    
T  52059844 tataacacaagttaaaataaaatcaaattgttttcatgtaacctataagttgttttc 52059900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 40185 - 40251
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||  |||||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  40185 ttatatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagttgttttcataagtt 40251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 12407774 - 12407713
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| ||  |||||| |||||||||||||||  ||||||||||    
T  12407774 tataacaaaagataaaataaagtaaatctgttttcatgtaagttataagtcattttcataag 12407713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 18704148 - 18704088
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||| |||||||||| | ||||||| |||| |||||||||||||||||||    
T  18704148 tataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataag 18704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 4855655 - 4855715
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||| |||||||||||| || ||||| | || |||||||||||||||||||||||    
T  4855655 tataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataa 4855715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 10303758 - 10303821
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtttt 120  Q
    |||||||||||||||||||||||||| ||||||| || |||    |||||||||||||||||||||    
T  10303758 tataacaaaagataaaataaagtcaaattgttttcatttaa--cctaagttgttttcataagtttt 10303821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 32172613 - 32172671
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| ||||||||||||||  || |||| |||||| ||||||||||||    
T  32172613 aacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataag 32172671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 36539708 - 36539766
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||||||||||  |||||| || |||| ||||||||||||| |||||||    
T  36539708 caaaagataaaataaagtcaacctgttttcatataagctataagttgtttttataagtt 36539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 41277456 - 41277402
Alignment:
Q  62 aaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataag 41277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 14295463 - 14295524
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||||||  |||||| || |||| |||||| ||||||| ||||    
T  14295463 tataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaag 14295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 39823237 - 39823173
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||||||||||||||||  |  ||| || |||| || ||||||||||||||||    
T  39823237 ttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttgttttcataag 39823173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10272538 - 10272483
Alignment:
Q  61 aaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||| ||||||| |||||||  | |||| |||||||||||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataag 10272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 28586879 - 28586824
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgtttt 110  Q
    ||||||||||||||||||||||||||  |||||| || ||| ||||||| ||||||    
T  28586879 tataacaaaagataaaataaagtcaaactgttttcatataaattataagctgtttt 28586824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 34205206 - 34205257
Alignment:
Q  65 gataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| ||||||||| || ||||||| |||| |||||||||||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttgttttcataag 34205257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 42181205 - 42181142
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    ||||||||||||||||| |||||||| | ||||| || |||| |||||||||||| || |||||    
T  42181205 tataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcacaagtt 42181142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 9202856 - 9202798
Alignment:
Q  60 caaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||||||||||||| || ||||||| || ||||  ||||| ||||||||||||||    
T  9202856 caaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagtt 9202798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 201
Target Start/End: Complemental strand, 14599375 - 14599329
Alignment:
Q  155 gttataagttgtttcgataagttctctcaaacaagctcataagtgtt 201  Q
    ||||||||||||||||||||| |||||||||||| || | |||||||    
T  14599375 gttataagttgtttcgataagctctctcaaacaatcttacaagtgtt 14599329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 18543306 - 18543248
Alignment:
Q  59 acaaaagataaaataaagtcaag-ttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| || ||||||||||||  |||||||||| |||| |||||||||||||||||||    
T  18543306 acaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcataag 18543248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 40159779 - 40159837
Alignment:
Q  58 aacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||||||| || ||||||||| ||||||| || |||||||||| | |||||||||||    
T  40159779 aacaaaagattaagtaaagtcaaattgttttcatataagttataaatcgttttcataag 40159837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 41957562 - 41957503
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||  |||| |||| || ||||||| |||||||||||||| ||||||||||||    
T  41957562 tataacaaaaga--aaatgaagttaaattgttttcatgtaagttataagctgttttcataag 41957503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 32969230 - 32969189
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaag 96  Q
    |||||||||||||||||||||||||| || ||||||| ||||    
T  32969230 tataacaaaagataaaataaagtcaaattatttttatataag 32969189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 37526312 - 37526239
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt-ttctggaga 127  Q
    ||||| |||||||||||| || ||||   ||||| || |||| ||||||||||||||||||||| |||||||||    
T  37526312 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggaga 37526239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 37588473 - 37588400
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt-ttctggaga 127  Q
    ||||| |||||||||||| || ||||   ||||| || |||| ||||||||||||||||||||| |||||||||    
T  37588473 tataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggaga 37588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 11615465 - 11615497
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttt 87  Q
    |||||||||||||||||||||||||| ||||||    
T  11615465 tataacaaaagataaaataaagtcaaattgttt 11615497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 11667121 - 11667153
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttt 88  Q
    |||||||| ||||||||||||||||||||||||    
T  11667121 ataacaaaggataaaataaagtcaagttgtttt 11667153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 16889693 - 16889753
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||| | |||||||  |||||||||  ||| |||||| ||||||||||||    
T  16889693 ataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataag 16889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 18857512 - 18857452
Alignment:
Q  56 ataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    |||||| | |||||||||||||||| |||||||| | |||  |||||| ||||||||||||    
T  18857512 ataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcataag 18857452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 29590864 - 29590828
Alignment:
Q  44 tatgctacttatataacaaaagataaaataaagtcaa 80  Q
    ||||||| || ||||||||||||||||||||||||||    
T  29590864 tatgctatttctataacaaaagataaaataaagtcaa 29590828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 32059694 - 32059642
Alignment:
Q  63 aagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||||||||  |||||| || |||| |||||| |||||||||||    
T  32059694 aagataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 35095896 - 35095864
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgttt 87  Q
    |||||||||||||||||||||||||| ||||||    
T  35095896 tataacaaaagataaaataaagtcaaattgttt 35095864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 36318740 - 36318792
Alignment:
Q  65 gataaaataaagtcaagttg-tttttatgtaagttataagttgttttcataag 116  Q
    |||||||||||||||| ||| ||||| | |||||| |||||||||||||||||    
T  36318740 gataaaataaagtcaatttgttttttgtataagttttaagttgttttcataag 36318792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 39750102 - 39750162
Alignment:
Q  57 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagt 117  Q
    ||||||||||||||||||||||||  | |||| || ||||||||||  |||||||| ||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagttataacctgttttcacaagt 39750162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 42583106 - 42583166
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||||||| ||||||||| || |||||||  ||||||  ||||| |||||||||||    
T  42583106 tataacaaaagatgaaataaagttaaattgttttcgtgtaagggataagctgttttcataa 42583166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 42646872 - 42646932
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||||| |||||||| |||| || |||||||| | |||| |||||| |||||||||||    
T  42646872 tataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataa 42646932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 27533 - 27593
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    ||||||| |||||||||||||||||| ||||||| || |||  ||||||||||||||||||    
T  27533 tataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataa 27593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 5640 - 5706
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagtt 118  Q
    |||||||  |||||||||| ||||||||||| ||||  ||||||| ||||||| |||||||||||||    
T  5640 ttatatagaaaaagataaattaaagtcaagtcgtttccatgtaagctataagtcgttttcataagtt 5706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 58209 - 58146
Alignment:
Q  52 ttatataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||||||||||| |||||||||| | || || || || | ||||||||||||||||||    
T  58209 ttatataacaaaagataacataaagtcaaatagtattaatatacgctataagttgttttcataa 58146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 1837 - 1776
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  1837 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 1776  T

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Target: scaffold0549; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 3927 - 3866
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataag 116  Q
    ||||||||||||||||||||||| || || |||| || || | ||||||||| |||||||||    
T  3927 tataacaaaagataaaataaagttaatttattttcatatacgctataagttggtttcataag 3866  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 9888 - 9828
Alignment:
Q  55 tataacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataa 115  Q
    |||||||||| ||||||| |||||||   ||||| || ||||||||| |||||||||||||    
T  9888 tataacaaaaaataaaattaagtcaaaaagttttcatataagttataggttgttttcataa 9828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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