View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6294_high_8 (Length: 386)
Name: NF6294_high_8
Description: NF6294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6294_high_8 |
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| [»] scaffold0021 (1 HSPs) |
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Alignment Details
Target: scaffold0021 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 6 - 380
Target Start/End: Original strand, 161580 - 161952
Alignment:
| Q |
6 |
aggaacttattgtcatcaaacatcataagacaaactcaactcatatcttaaatcttgcaagcttcactattttcaaagcgaacaattccaccttgttcga |
105 |
Q |
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| T |
161580 |
aggaacttattgtcatcaaacatcataagacaaactcaactcatatcttaaatcttgcaagcttcactattttcaaagtgaacaattccaccttgttcga |
161679 |
T |
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| Q |
106 |
gctttatagtctcaaataattcctttttcattggacacatgtgaaaggagcatctacagttcaatgctcaactctcccttcgttcctaacttgtcaccaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||||||||| |
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| T |
161680 |
gctttatagtctcaaataattcctttttcattggacacatgtgaaaggagcatccacagttcaatgcccaactctcctttcgttcccaacttgtcaccaa |
161779 |
T |
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| Q |
206 |
tagcgcctccacaccatcaaaatcctcatctgtgccaactgcaacttgcacgaaatcctcattatcccataacgcatgacaatttctcttgaagtgactt |
305 |
Q |
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|||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||| |||| || |||| | |||||||||||||||| |
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| T |
161780 |
tagcgcctccgcaccatcaaaatcctcctctacgccaactgcaatttgcacgaaatcatcattatcctataatacaggacattctctcttgaagtgactt |
161879 |
T |
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| Q |
306 |
atcttttaacaaataaagcacttcaacctttcaacacttcttggccatgtcttagacttctcttccctttactct |
380 |
Q |
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|||||||| |||| || ||||||||| | |||| || |||| |||||| |||||| ||| ||||||||||||| |
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| T |
161880 |
gtcttttaaaaaatgaaacacttcaacgtgtcaatacatcttcgccatgatttagac-tct-ttccctttactct |
161952 |
T |
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