View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6294_low_23 (Length: 251)

Name: NF6294_low_23
Description: NF6294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6294_low_23
NF6294_low_23
[»] chr2 (31 HSPs)
chr2 (111-212)||(6333359-6333461)
chr2 (154-242)||(7588531-7588618)
chr2 (156-232)||(14152096-14152171)
chr2 (152-242)||(22351639-22351728)
chr2 (106-212)||(37245491-37245609)
chr2 (146-206)||(927910-927969)
chr2 (105-207)||(9074189-9074302)
chr2 (152-230)||(43021713-43021790)
chr2 (152-207)||(8852052-8852106)
chr2 (152-243)||(14382926-14383016)
chr2 (152-207)||(24997075-24997129)
chr2 (106-193)||(31192949-31193049)
chr2 (146-192)||(2780755-2780801)
chr2 (153-207)||(12855014-12855067)
chr2 (155-205)||(17485814-17485863)
chr2 (155-205)||(17929283-17929332)
chr2 (153-207)||(30822609-30822662)
chr2 (146-192)||(38901729-38901775)
chr2 (106-208)||(39433977-39434091)
chr2 (152-240)||(1073108-1073195)
chr2 (146-206)||(1987115-1987174)
chr2 (152-207)||(4296796-4296850)
chr2 (155-205)||(1308725-1308774)
chr2 (152-222)||(13151509-13151578)
chr2 (106-152)||(1987179-1987227)
chr2 (106-152)||(43495682-43495730)
chr2 (152-232)||(6362924-6363002)
chr2 (152-192)||(7763512-7763552)
chr2 (111-152)||(31174156-31174199)
chr2 (152-192)||(36526830-36526870)
chr2 (159-243)||(38997290-38997373)
[»] chr5 (36 HSPs)
chr5 (105-240)||(14278789-14278936)
chr5 (152-242)||(27942449-27942538)
chr5 (152-242)||(40888852-40888941)
chr5 (146-243)||(42608062-42608158)
chr5 (146-218)||(8176321-8176392)
chr5 (152-240)||(19241276-19241363)
chr5 (152-240)||(32976600-32976687)
chr5 (156-232)||(37882457-37882532)
chr5 (146-218)||(41153024-41153095)
chr5 (146-218)||(41263344-41263415)
chr5 (106-201)||(25652812-25652919)
chr5 (152-242)||(7650961-7651050)
chr5 (152-243)||(27407067-27407157)
chr5 (152-242)||(31008409-31008499)
chr5 (106-192)||(4577012-4577111)
chr5 (152-240)||(42317848-42317935)
chr5 (152-240)||(42807024-42807111)
chr5 (152-207)||(31013868-31013922)
chr5 (155-205)||(23089513-23089562)
chr5 (150-232)||(34529404-34529485)
chr5 (106-152)||(10569775-10569823)
chr5 (146-191)||(25032361-25032406)
chr5 (155-243)||(25670933-25671020)
chr5 (111-152)||(27407714-27407757)
chr5 (152-240)||(30648137-30648224)
chr5 (150-205)||(9274472-9274525)
chr5 (155-205)||(3454731-3454780)
chr5 (159-205)||(4219472-4219517)
chr5 (106-140)||(8176268-8176302)
chr5 (146-192)||(10569828-10569874)
chr5 (155-205)||(13479851-13479900)
chr5 (146-207)||(15972560-15972620)
chr5 (155-192)||(39238421-39238458)
chr5 (111-152)||(8681258-8681301)
chr5 (146-214)||(8681306-8681373)
chr5 (192-240)||(27420641-27420689)
[»] chr3 (61 HSPs)
chr3 (147-232)||(46572944-46573028)
chr3 (152-240)||(29701644-29701731)
chr3 (152-243)||(50415854-50415944)
chr3 (152-242)||(44084269-44084358)
chr3 (152-240)||(30418453-30418540)
chr3 (152-240)||(32120462-32120549)
chr3 (152-240)||(43473852-43473939)
chr3 (146-217)||(25832742-25832811)
chr3 (152-242)||(6048720-6048809)
chr3 (152-242)||(20139320-20139409)
chr3 (146-212)||(42601751-42601816)
chr3 (152-242)||(51999261-51999350)
chr3 (146-207)||(35424027-35424087)
chr3 (152-232)||(138945-139024)
chr3 (152-212)||(4045970-4046029)
chr3 (152-212)||(42560891-42560950)
chr3 (152-235)||(41183241-41183323)
chr3 (106-217)||(41890520-41890642)
chr3 (146-205)||(49147306-49147364)
chr3 (146-208)||(25450652-25450713)
chr3 (111-193)||(26550105-26550186)
chr3 (146-192)||(33935000-33935046)
chr3 (146-192)||(42601523-42601569)
chr3 (146-192)||(49823188-49823234)
chr3 (146-212)||(50033657-50033722)
chr3 (146-192)||(51427109-51427155)
chr3 (106-152)||(33748745-33748793)
chr3 (152-207)||(17466510-17466564)
chr3 (152-207)||(47144168-47144222)
chr3 (146-197)||(49357515-49357565)
chr3 (146-193)||(50176103-50176150)
chr3 (152-242)||(7008015-7008104)
chr3 (146-192)||(7521155-7521201)
chr3 (156-242)||(10426459-10426544)
chr3 (153-207)||(25790800-25790853)
chr3 (155-205)||(26165581-26165630)
chr3 (146-192)||(37410437-37410483)
chr3 (152-242)||(55026699-55026788)
chr3 (152-205)||(12974665-12974717)
chr3 (146-242)||(47701080-47701176)
chr3 (146-207)||(50017048-50017108)
chr3 (152-204)||(27847407-27847458)
chr3 (152-240)||(50733978-50734065)
chr3 (152-240)||(50778790-50778877)
chr3 (152-207)||(5845164-5845218)
chr3 (155-222)||(36178731-36178797)
chr3 (114-154)||(53722450-53722492)
chr3 (155-205)||(35472653-35472702)
chr3 (146-184)||(35853210-35853248)
chr3 (152-242)||(37183861-37183950)
chr3 (106-140)||(37410384-37410418)
chr3 (106-140)||(42601470-42601504)
chr3 (146-184)||(43022665-43022703)
chr3 (146-184)||(49710407-49710445)
chr3 (152-193)||(744224-744265)
chr3 (106-152)||(15493787-15493835)
chr3 (106-139)||(49823135-49823168)
chr3 (160-204)||(6832382-6832425)
chr3 (111-152)||(33795465-33795508)
chr3 (146-212)||(33795513-33795575)
chr3 (111-139)||(42601836-42601864)
[»] chr4 (42 HSPs)
chr4 (152-240)||(34199293-34199380)
chr4 (146-242)||(39113773-39113868)
chr4 (152-240)||(6290561-6290648)
chr4 (152-242)||(3618477-3618566)
chr4 (152-242)||(40720994-40721083)
chr4 (152-240)||(3533331-3533418)
chr4 (152-243)||(8991741-8991831)
chr4 (152-242)||(28899291-28899380)
chr4 (152-242)||(33523229-33523318)
chr4 (146-192)||(53184114-53184160)
chr4 (152-240)||(56053978-56054065)
chr4 (152-235)||(38173521-38173603)
chr4 (146-205)||(54356914-54356972)
chr4 (155-205)||(35809159-35809208)
chr4 (152-242)||(48506630-48506719)
chr4 (152-240)||(23540450-23540537)
chr4 (106-155)||(40596727-40596778)
chr4 (152-204)||(55560503-55560554)
chr4 (146-205)||(12158134-12158192)
chr4 (146-193)||(31848792-31848839)
chr4 (146-205)||(39049101-39049159)
chr4 (152-207)||(46917535-46917589)
chr4 (146-217)||(47750243-47750312)
chr4 (152-206)||(34464047-34464100)
chr4 (153-202)||(53348086-53348134)
chr4 (152-212)||(16020836-16020895)
chr4 (105-154)||(39418283-39418334)
chr4 (152-207)||(2215306-2215360)
chr4 (106-152)||(18469332-18469379)
chr4 (156-235)||(33077901-33077979)
chr4 (155-205)||(4981505-4981554)
chr4 (155-193)||(13094417-13094455)
chr4 (152-242)||(13110520-13110609)
chr4 (155-205)||(17329940-17329988)
chr4 (106-140)||(31848739-31848773)
chr4 (155-205)||(45081439-45081488)
chr4 (106-140)||(53184061-53184095)
chr4 (143-192)||(55930-55979)
chr4 (106-152)||(10089906-10089954)
chr4 (155-192)||(19272791-19272828)
chr4 (152-192)||(33604665-33604705)
chr4 (146-206)||(34564119-34564178)
[»] chr7 (30 HSPs)
chr7 (152-242)||(47159519-47159607)
chr7 (152-242)||(36518474-36518563)
chr7 (146-212)||(22737613-22737678)
chr7 (152-235)||(37887813-37887895)
chr7 (106-212)||(25218773-25218891)
chr7 (152-212)||(28318067-28318126)
chr7 (152-240)||(33078809-33078896)
chr7 (152-192)||(35029133-35029173)
chr7 (152-204)||(42881355-42881406)
chr7 (152-207)||(5813092-5813146)
chr7 (146-217)||(22191205-22191274)
chr7 (108-152)||(35193086-35193132)
chr7 (146-192)||(21654854-21654900)
chr7 (152-242)||(40302515-40302604)
chr7 (106-152)||(24793550-24793598)
chr7 (106-207)||(30630779-30630891)
chr7 (154-235)||(37951713-37951793)
chr7 (149-197)||(25038614-25038661)
chr7 (152-240)||(33508550-33508638)
chr7 (146-217)||(43202157-43202228)
chr7 (146-205)||(114486-114544)
chr7 (106-140)||(21654919-21654953)
chr7 (146-184)||(43571112-43571150)
chr7 (146-192)||(48984915-48984961)
chr7 (106-139)||(22737560-22737593)
chr7 (177-230)||(37888523-37888575)
chr7 (106-139)||(48984981-48985014)
chr7 (152-192)||(30566608-30566648)
chr7 (152-192)||(30720128-30720168)
chr7 (155-203)||(32130298-32130345)
[»] chr1 (40 HSPs)
chr1 (106-207)||(17783368-17783481)
chr1 (106-212)||(41542316-41542432)
chr1 (152-240)||(2478352-2478439)
chr1 (146-229)||(3755046-3755128)
chr1 (106-212)||(8464085-8464203)
chr1 (152-229)||(8468293-8468369)
chr1 (146-207)||(44334280-44334340)
chr1 (146-207)||(44929308-44929368)
chr1 (152-240)||(48388132-48388219)
chr1 (152-240)||(51494496-51494583)
chr1 (152-235)||(36230320-36230402)
chr1 (146-192)||(44451288-44451334)
chr1 (106-192)||(44651078-44651177)
chr1 (152-204)||(19578934-19578985)
chr1 (152-240)||(31159345-31159432)
chr1 (152-240)||(48404288-48404375)
chr1 (152-207)||(31468124-31468178)
chr1 (146-192)||(643840-643886)
chr1 (153-207)||(45239129-45239182)
chr1 (105-152)||(52933732-52933781)
chr1 (105-152)||(52941367-52941416)
chr1 (152-205)||(29523696-29523748)
chr1 (152-240)||(45623554-45623641)
chr1 (152-207)||(27630484-27630538)
chr1 (152-243)||(29919325-29919415)
chr1 (113-153)||(36303037-36303079)
chr1 (152-207)||(37420368-37420422)
chr1 (146-205)||(48729315-48729373)
chr1 (150-192)||(20584873-20584915)
chr1 (155-205)||(35847148-35847197)
chr1 (106-140)||(44451235-44451269)
chr1 (106-140)||(44929255-44929289)
chr1 (113-152)||(48729378-48729419)
chr1 (146-192)||(52933786-52933832)
chr1 (146-192)||(52941421-52941467)
chr1 (152-192)||(23092774-23092814)
chr1 (152-192)||(30878568-30878608)
chr1 (152-192)||(37646584-37646624)
chr1 (152-192)||(37691314-37691354)
chr1 (152-192)||(45456175-45456215)
[»] chr6 (18 HSPs)
chr6 (152-235)||(8669855-8669937)
chr6 (146-207)||(29428536-29428596)
chr6 (152-242)||(8660517-8660606)
chr6 (146-192)||(32359753-32359799)
chr6 (152-240)||(34838541-34838628)
chr6 (146-192)||(6380507-6380553)
chr6 (152-242)||(30446202-30446291)
chr6 (152-240)||(10883832-10883919)
chr6 (152-207)||(197797-197851)
chr6 (153-207)||(631511-631564)
chr6 (152-207)||(17961288-17961342)
chr6 (146-217)||(22627819-22627889)
chr6 (152-207)||(34328274-34328328)
chr6 (106-140)||(6380454-6380488)
chr6 (146-184)||(6725643-6725681)
chr6 (106-152)||(8219004-8219052)
chr6 (152-192)||(12501839-12501879)
chr6 (156-192)||(24348440-24348476)
[»] chr8 (36 HSPs)
chr8 (152-242)||(35931820-35931909)
chr8 (150-235)||(29637177-29637261)
chr8 (152-240)||(1958204-1958291)
chr8 (146-212)||(41477171-41477236)
chr8 (147-207)||(17741705-17741764)
chr8 (146-218)||(18029517-18029588)
chr8 (150-242)||(23353205-23353296)
chr8 (146-217)||(30470836-30470906)
chr8 (146-192)||(34955684-34955730)
chr8 (106-212)||(36912405-36912523)
chr8 (146-207)||(5212285-5212344)
chr8 (152-240)||(45101049-45101136)
chr8 (152-243)||(15053589-15053679)
chr8 (146-217)||(26632171-26632241)
chr8 (146-217)||(38584912-38584982)
chr8 (146-217)||(39811076-39811147)
chr8 (155-242)||(43524418-43524504)
chr8 (146-212)||(8609999-8610064)
chr8 (146-192)||(13814954-13815000)
chr8 (147-212)||(30289749-30289815)
chr8 (155-205)||(40283470-40283519)
chr8 (146-192)||(42860721-42860767)
chr8 (106-152)||(30470783-30470831)
chr8 (152-240)||(12272506-12272593)
chr8 (152-232)||(31129527-31129606)
chr8 (152-192)||(42859932-42859972)
chr8 (152-207)||(35099428-35099482)
chr8 (156-243)||(43525117-43525203)
chr8 (152-207)||(43618373-43618427)
chr8 (146-192)||(4625512-4625558)
chr8 (106-140)||(17494519-17494553)
chr8 (106-140)||(18029464-18029498)
chr8 (155-205)||(26244492-26244541)
chr8 (114-152)||(7990489-7990529)
chr8 (111-139)||(41477256-41477284)
chr8 (152-192)||(44503174-44503214)
[»] scaffold0054 (1 HSPs)
scaffold0054 (152-240)||(57767-57854)
[»] scaffold0012 (1 HSPs)
scaffold0012 (111-212)||(124004-124115)
[»] scaffold0100 (2 HSPs)
scaffold0100 (106-155)||(30503-30554)
scaffold0100 (146-230)||(30556-30639)
[»] scaffold0362 (1 HSPs)
scaffold0362 (152-192)||(5347-5387)


Alignment Details
Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 6333359 - 6333461
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggagag--taaaagttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgt 208  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| || ||| || ||||||| ||||||||||||||||||||    
T  6333359 tagagtgttgaatgaaaaatcattggagaggataaaagttgaataagagagagaaaatgatatggaatattaggaattg-aaaaagtggatgttgaatgt 6333457  T
Q  209 tgtt 212  Q
    ||||    
T  6333458 tgtt 6333461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 242
Target Start/End: Original strand, 7588531 - 7588618
Alignment:
Q  154 agagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||||| ||| |||||||||||| ||||||    
T  7588531 agagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtctaa 7588618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 14152096 - 14152171
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||| |||| |||| |||||||||    
T  14152096 agagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatgttgttgaatggttttaaccattgta 14152171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 22351639 - 22351728
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| ||  | |||||||||||| ||||||    
T  22351639 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatattgattaccattgtaaatggtctaa 22351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 37245609 - 37245491
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||| | |||||||||||| ||||    
T  37245609 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaa 37245511  T
Q  193 agtggatgttgaatgttgtt 212  Q
    ||||| ||||||||| ||||    
T  37245510 agtgggtgttgaatggtgtt 37245491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 927910 - 927969
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaat 206  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||    
T  927910 gttgaataagagagagaaaatgatgtggagtgttgggaatt-aaaaaagtgggtgttgaat 927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 9074189 - 9074302
Alignment:
Q  105 atgggatagagtgttgaatgaaaaaccattggagag--taaaagttg-----------aataagagagagaaaatgatgtgaaatgttgggaattgaaaa 191  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||           ||||||||||||||||||||||| | ||||||||||| ||||    
T  9074189 atggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaatt-aaaa 9074287  T
Q  192 aagtggatgttgaatg 207  Q
    |||||| |||||||||    
T  9074288 aagtgg-tgttgaatg 9074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 43021790 - 43021713
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattg 230  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| |||||| ||| ||| | |||||||    
T  43021790 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgttgaatatttgttaccattg 43021713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 8852106 - 8852052
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  8852106 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 8852052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 14383016 - 14382926
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||||||||| | |||| |||||||| |||||||||||||||  ||| || ||| | |||  ||||||||||| |||||||    
T  14383016 taagagagagaaaatgatgtggagtgttaggaattga-aaaagtggatgttgagggtttttgaatatattttgccattgtaaatggtctaat 14382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 24997129 - 24997075
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  24997129 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 24997075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 31192949 - 31193049
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagttga-----------ataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||           |||||||||||||||||||||| | |||||| ||||||||||    
T  31192949 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtattgaataagagagagaaaatgatgtggagtgttggaaattgaaaaa 31193048  T
Q  193 a 193  Q
    |    
T  31193049 a 31193049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 2780755 - 2780801
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||  |||||| ||||||||||||    
T  2780755 gttgaataagagagagaaaatgatgtagaatgttaggaattgaaaaa 2780801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 12855067 - 12855014
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  12855067 aagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 12855014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 17485863 - 17485814
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  17485863 gagagagaaaatgatgtggagtgttgggaattga-aaaagtggatgttgaa 17485814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 17929283 - 17929332
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  17929283 gagagagaaaatgatgtggagtgttgggaattgaaaaaa-tggatgttgaa 17929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 30822609 - 30822662
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||| | |||||||||||| ||||||||| |||||||||    
T  30822609 aagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 30822662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 38901775 - 38901729
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||| ||||||||||||    
T  38901775 gttgaataagagagagaaaatgatgtggagtgtttggaattgaaaaa 38901729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 208
Target Start/End: Original strand, 39433977 - 39434091
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagttg-----------aataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||           ||||| ||||| ||||||||||| |||||||| ||||| ||||    
T  39433977 tgggatagagtgttgaatgaaaaatcattggagaggataaaagttgaatgagtgtttaataaaagagaaaaaatgatgtggaatgttggaaattg-aaaa 39434075  T
Q  193 agtggatgttgaatgt 208  Q
    ||||| ||||||||||    
T  39434076 agtgggtgttgaatgt 39434091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 1073108 - 1073195
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||| ||| | |||||  ||||||||| ||||||||||||  |||||| ||| | ||| |||||||||||| ||||    
T  1073108 taagagagagaaaatgaagtggagtgttgaaaattgaaaa-agtggatgttgagggttgttgaatttgttttaccattgtaaatggtct 1073195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 1987174 - 1987115
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaat 206  Q
    ||||||||||||| ||||||||||||| | ||||| ||||||| ||||||| |||||||||    
T  1987174 gttgaataagagatagaaaatgatgtggagtgttgagaattga-aaaagtgaatgttgaat 1987115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 4296796 - 4296850
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||| |||||||||    
T  4296796 taagagagagaaaataatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 4296850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 1308725 - 1308774
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | |||||| ||||| |||||||||||||||||    
T  1308725 gagagagaaaatgatgtggagtgttggaaattg-aaaaagtggatgttgaa 1308774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 13151509 - 13151578
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgttttt 222  Q
    ||||||| | ||||| ||||| | ||||||||||||||||| |||| |||||||||||||| |||| ||||    
T  13151509 taagagaaaaaaaattatgtgcagtgttgggaattgaaaaa-gtgggtgttgaatgttgttgaatggtttt 13151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 1987227 - 1987179
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  1987227 tggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaat 1987179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 43495682 - 43495730
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagttgaat 152  Q
    |||| ||||||||||||||||||| ||||||||||  ||||||||||||    
T  43495682 tggggtagagtgttgaatgaaaaatcattggagaggataaaagttgaat 43495730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 6363002 - 6362924
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||||||||||||||||||  | |||||| |||||||||| |||||||||||  |||||| ||||  ||| |||||||||    
T  6363002 taagagagagaaaatgatgtagagtgttgg-aattgaaaaa-gtggatgttgaccgttgttgaatgggtttaaccattgta 6362924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 7763512 - 7763552
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  7763512 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 7763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 31174156 - 31174199
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||||||||||||||||||||||||| ||  |||||||||||||    
T  31174156 tagagtgttgaatgaaaaaccattggggatggtaaaagttgaat 31174199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 36526870 - 36526830
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||| ||||| | |||||||||||||||||    
T  36526870 taagagagagaaaataatgtggagtgttgggaattgaaaaa 36526830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 38997290 - 38997373
Alignment:
Q  159 gagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||   ||||| ||||||||||| |||| ||||||| |||||| ||  ||||  |||||||||||| |||||||    
T  38997290 gagaaaatgatgtggtgtgttgcgaattgaaaaa-gtgggtgttgaaggttgttgaaacttttcaaccattgtaaatggtctaat 38997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 105 - 240
Target Start/End: Complemental strand, 14278936 - 14278789
Alignment:
Q  105 atgggatagagtgttgaatgaaaaaccattggagag--taaaagttgaat-----------aagagagagaaaatgatgtgaaatgttgggaattgaaaa 191  Q
    ||||| ||||||||||||||||||||||||||||||  ||||||||||||           |||||||||||||||||||| | ||||||||||||||||    
T  14278936 atggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaataagagagagaaaatgatgtggagtgttgggaattgaaaa 14278837  T
Q  192 aagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    || ||| |||||| ||||||| |||||||||||||||||||||| ||||    
T  14278836 aa-tgggtgttgagtgttgttgaatgtttttcaccattgtaaatggtct 14278789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 27942538 - 27942449
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||| ||||||||| |||| ||||||| |||||| ||||| ||| |||||||||||| ||||||    
T  27942538 taagagagagaaaatgatgtggagtgttggggattgaaaaa-gtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtctaa 27942449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 40888941 - 40888852
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| ||| || ||||| ||| |||||||||||| ||||||    
T  40888941 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttattgaatgtattttaccattgtaaatggtctaa 40888852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 42608062 - 42608158
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||| ||||||||||||| ||| | ||||   |||||||||||  ||||||||||||||||| ||||||||||||||||||| || |||||||    
T  42608062 gttgaataaaagagagaaaatgacgtggagtgttaataattgaaaaaac-ggatgttgaatgttgttgaatgtttttcaccattgtagatggtctaat 42608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 8176321 - 8176392
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgt 218  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||| |||| |||||    
T  8176321 gttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatgatgttgaatgt 8176392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 19241363 - 19241276
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||| ||||||| |||||||| ||||||| |||||| ||||| ||| |||||||||||| ||||    
T  19241363 taagagagagaaaatgatgtggagtgttgagaattga-aaaagtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtct 19241276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 32976600 - 32976687
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| ||| || ||||| ||| |||||||||||| ||||    
T  32976600 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttattgaatgtattttaccattgtaaatggtct 32976687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 37882457 - 37882532
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||| ||||||||||| | |||||||||||||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  37882457 agagaaaaaatgatgtggagtgttgggaattgaaaaaa-tgggtgttgaacgttgttgaatgtttttcaccattgta 37882532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 41153024 - 41153095
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgt 218  Q
    ||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||| ||||| |||||    
T  41153024 gttgaataagagagagaaaatgatgtggagtgttgagaattgaaaaaa-tggatgttgaatattgttgaatgt 41153095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 41263415 - 41263344
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgt 218  Q
    ||||||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| |||| |||||    
T  41263415 gttgaataagagagagaaaatgatgtggagcgttgggaattga-aaaagtggatgttgaatggtgttgaatgt 41263344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 201
Target Start/End: Complemental strand, 25652919 - 25652812
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  25652919 tggggtagagtgttgaatgaaaaaccattggagagggtaaaaattcaatgagtgttgaataagagagagaaaatgatgtgaagtgttgggaattg-aaaa 25652821  T
Q  193 agtggatgt 201  Q
    |||||||||    
T  25652820 agtggatgt 25652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 7651050 - 7650961
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||||||||| | | |||| || |||||| ||||| ||| |||||||||||| ||||||    
T  7651050 taagagagagaaaatgatgtggagtgttgggaattgaaaaaa-taggtgttaaaggttgttgaatgtattttaccattgtaaatggtctaa 7650961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 27407067 - 27407157
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||  |||| || |||||| ||||||| | |||||||||||| |||||||    
T  27407067 taagagagagaaaataatgtggagtgttgggaattg-aaaaagtgagtgttaaaggttgttgaatgtttgtgaccattgtaaatggtctaat 27407157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 31008409 - 31008499
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgtt-gaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||||| ||||| |||||| ||||||||| ||||  || |||||| ||||| ||| |||||||||||| ||||||    
T  31008409 taagagagagaaaatgatgtgaagtgttgagaattg-aaaaagtgggtgttataaggttgttgaatgtattttaccattgtaaatggtctaa 31008499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 4577111 - 4577012
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||| | |||||||||||||||||    
T  4577111 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 4577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 42317935 - 42317848
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    |||||||||||||||||| || | |||||| ||||| |||||||| |||||||| |||||| ||| | ||| |||||||||||| ||||    
T  42317935 taagagagagaaaatgatatggagtgttggaaattg-aaaaagtgaatgttgaaggttgttgaatttgttttaccattgtaaatggtct 42317848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 42807024 - 42807111
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||| |||||| ||||||||| ||||||  |||||| ||| ||| | |||||||||||| ||||    
T  42807024 taagagagagaaaatgatgtggagtgttgagaattg-aaaaagtgggtgttgagggttgttgaatatttgtgaccattgtaaatggtct 42807111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 31013868 - 31013922
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||    
T  31013868 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 31013922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 23089562 - 23089513
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  23089562 gagagagaaaatgatgtgaagtgttgggaatt-aaaaaagtgggtgttgaa 23089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 232
Target Start/End: Original strand, 34529404 - 34529485
Alignment:
Q  150 aataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||| ||||||||||||||||||  ||||| ||||| |||||||| | |||||||||||||| ||| |||| ||| ||||||    
T  34529404 aataaaagagagaaaatgatgtgatgtgttgagaatt-aaaaaagtaggtgttgaatgttgttgaatattttccactattgta 34529485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 10569775 - 10569823
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattg--gagagtaaaagttgaat 152  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||    
T  10569775 tggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaat 10569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 25032406 - 25032361
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaa 191  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||    
T  25032406 gttgaataagagagagaaaatgatgtggagtgttggaaattgaaaa 25032361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 25670933 - 25671020
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||||||| ||| || ||  ||| | ||||||||| || |||||||    
T  25670933 gagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttattgaaaatttgtaaccattgtacatggtctaat 25671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 27407714 - 27407757
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  27407714 tagagtgttgaatgaaaaaccattggagagggtaaaagttgaat 27407757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 30648137 - 30648224
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||| |||||| |||| | ||| ||||||||||||| |||| ||||||  |||||| ||||||| | |||||||||||| ||||    
T  30648137 taagagagataaaatggtgtggagtgtagggaattgaaaaa-gtgggtgttgagggttgttgaatgtttgtgaccattgtaaatggtct 30648224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 9274472 - 9274525
Alignment:
Q  150 aataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||    
T  9274472 aataagagaga-aaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaa 9274525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 3454780 - 3454731
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  3454780 gagagagaaaatgatgtggagtgttgagaattga-aaaagtggatgttgaa 3454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 4219472 - 4219517
Alignment:
Q  159 gagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||| |||||||||||| ||||||||| |||||||    
T  4219472 gagaaaatgatgtgaagtgttgggaattg-aaaaagtgggtgttgaa 4219517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 8176268 - 8176302
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  8176268 tggggtagagtgttgaatgaaaaaccattggagag 8176302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 10569828 - 10569874
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||| | ||||||||||| | |||||||||||||||||    
T  10569828 gttgaataagagacaaaaaatgatgtggagtgttgggaattgaaaaa 10569874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 13479851 - 13479900
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||||||||| |||||||||| |||||||    
T  13479851 gagagagaaaatgatgtggagtgttgggaatt-aaaaaagtgggtgttgaa 13479900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 15972620 - 15972560
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| ||||  | |||||| ||||| |||||||||||||| ||||    
T  15972620 gttgaataagagagagaaaataatgtcgattgttggaaattg-aaaaagtggatgttaaatg 15972560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 39238458 - 39238421
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||||||||||||| | |||||||||||||||||    
T  39238458 gagagagaaaatgatgtggagtgttgggaattgaaaaa 39238421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 8681258 - 8681301
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||||||||||| ||||||||||||||||  |||||||||||||    
T  8681258 tagagtgttgaaagaaaaaccattggagagggtaaaagttgaat 8681301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 214
Target Start/End: Original strand, 8681306 - 8681373
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttca 214  Q
    ||||||||||| |||||||||||| || | |||||| ||||| ||||||| ||||| ||||||| ||||    
T  8681306 gttgaataagaaagagaaaatgatatggagtgttggaaattg-aaaaagttgatgtcgaatgtttttca 8681373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 27420641 - 27420689
Alignment:
Q  192 aagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    |||| |||||||| ||||||| ||||||||||||||| |||||| ||||    
T  27420641 aagtagatgttgagtgttgttgaatgtttttcaccatggtaaatggtct 27420689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 46572944 - 46573028
Alignment:
Q  147 ttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  46572944 ttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatgttgttgaatgtttttcaccattgta 46573028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 29701731 - 29701644
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| |||||| ||||| ||| |||||||||||| ||||    
T  29701731 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtct 29701644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 50415854 - 50415944
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||||||||| | |||||| |||||||||| |||| ||||||| |||||| ||||| ||| |||||||||||| |||||||    
T  50415854 taagagagagaaaatgatgtggagtgttggaaattgaaaaa-gtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtctaat 50415944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 44084358 - 44084269
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||||    
T  44084358 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgttgaatttgttttaccattgtaaatggtctaa 44084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 30418453 - 30418540
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| ||| || ||||| ||| |||||||||||| ||||    
T  30418453 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttattgaatgtattttaccattgtaaatggtct 30418540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 32120462 - 32120549
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||    
T  32120462 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatttgttttaccattgtaaatggtct 32120549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 43473939 - 43473852
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||  |||||| ||| | ||| |||||||||||| ||||    
T  43473939 taagagagagaaaatgatctggaatgttgggaattga-aaaagtggatgttgagggttgttgaatatgtttaaccattgtaaatggtct 43473852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 25832742 - 25832811
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||| ||||    
T  25832742 gttgaataagagagagaaaatgatgtgaagtgttgggaattg-aaaaagtgg-tgttgaatggtgttgaatg 25832811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 6048720 - 6048809
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| ||  | |||||||||||| ||||||    
T  6048720 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatattagttaccattgtaaatggtctaa 6048809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 20139409 - 20139320
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||| | |||| ||||||| |||| |||| ||||||||| || ||||||    
T  20139409 taagagagagaaaatgatgtgaagtgttgagaattga-aaaagtgggtattgagtgttgttgaatggttttaaccattgtagatggtctaa 20139320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 42601816 - 42601751
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |||||||| ||||||||| ||||    
T  42601816 gttgaataagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatggtgtt 42601751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 51999261 - 51999350
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| | |||  ||||||||||| ||||||    
T  51999261 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatatattttgccattgtaaatggtctaa 51999350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 35424027 - 35424087
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||    
T  35424027 gttgaataagagagaaaaaatgatgtggagtgttgggaattgaaaaaa-tggatgttgaatg 35424087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 139024 - 138945
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||||||| ||||||||||| | ||||||||||||| ||||| ||||||||| ||||||| |||| |||| |||||||||    
T  139024 taagagagacaaaatgatgtggagtgttgggaattga-aaaagcggatgttgagtgttgttgaatggttttaaccattgta 138945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 4046029 - 4045970
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||    
T  4046029 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtggatgttgaaggttgtt 4045970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 42560950 - 42560891
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  42560950 taagagagagaaaatgatgtggaatgttgggaattga-aaaagtgggtgttgaaggttgtt 42560891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 41183323 - 41183241
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||  |||||| ||| ||| | ||||||||||||    
T  41183323 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgagggttgttgaatatttgtgaccattgtaaat 41183241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 41890642 - 41890520
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||| | |||||||||||| ||||    
T  41890642 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaa 41890544  T
Q  193 agtggatgttgaatgttgttcaatg 217  Q
    ||| ||||||||||| |||| ||||    
T  41890543 agt-gatgttgaatggtgttgaatg 41890520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 49147306 - 49147364
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||    
T  49147306 gttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtagatgttgaa 49147364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 208
Target Start/End: Original strand, 25450652 - 25450713
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgt 208  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||| ||| ||||||||||    
T  25450652 gttgaataagagagagaaaatgatgtggagcgttgggaattgaaaaaa-tgggtgttgaatgt 25450713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 193
Target Start/End: Original strand, 26550105 - 26550186
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggagag--taaaagttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaa 193  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||  ||||||||||||| | || ||| |||||||||||    
T  26550105 tagagtgttgaatgaaaa-ccattggagagggtaaaagttgaataagag--agaaaatgatgtggagtggtggaaattgaaaaaa 26550186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 33935046 - 33935000
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  33935046 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 33935000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 42601523 - 42601569
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  42601523 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 42601569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 49823188 - 49823234
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  49823188 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 49823234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 50033722 - 50033657
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||| ||||||||||  |||||||| |||| |||||||||||||||||||| ||||    
T  50033722 gttgaataagagagaaaaaatgatgtagaatgttggaaatt-aaaaaagtggatgttgaatggtgtt 50033657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 51427155 - 51427109
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  51427155 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 51427109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 33748793 - 33748745
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  33748793 tgggatagagtgttgaatgaaaaaccattggagaaggtaaaagttgaat 33748745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 17466564 - 17466510
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  17466564 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 17466510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 47144222 - 47144168
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  47144222 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 47144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 49357515 - 49357565
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtgg 197  Q
    |||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  49357515 gttgaataagagagagaaaatgatatgaaatgttaggaatt-aaaaaagtgg 49357565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 50176103 - 50176150
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaa 193  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  50176103 gttgaataagagagataaaatgatgtggagtgttgggaattgaaaaaa 50176150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 7008104 - 7008015
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||  | |||||| ||||| ||||||||| ||||||  |||||| ||| | ||| |||||||||||| ||||||    
T  7008104 taagagagagaaaatgatgtagagtgttggaaattg-aaaaagtgggtgttgagggttgttgaatttgttttaccattgtaaatggtctaa 7008015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 7521155 - 7521201
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||    
T  7521155 gttgaataagagagagaaaatgatctgaagtgttggaaattgaaaaa 7521201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 10426459 - 10426544
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||| | |||||||||||||||||| ||| ||||||| |||||| ||| | |||  ||||| ||||| ||||||    
T  10426459 agagagaaaatgatgtggagtgttgggaattgaaaaaa-tgggtgttgaaggttgttgaatatattttgccattataaatagtctaa 10426544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 25790800 - 25790853
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||| | |||||||||||| ||||||||| |||||||||    
T  25790800 aagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 25790853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 26165581 - 26165630
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  26165581 gagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaa 26165630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 37410437 - 37410483
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | | |||||||||||||||    
T  37410437 gttgaataagagagagaaaatgatgtggagtattgggaattgaaaaa 37410483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 55026788 - 55026699
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||| ||||| |||||  ||||||||||| ||| ||||||  |||||| ||| | ||| |||||||||||| ||||||    
T  55026788 taagagagagaaaatgaagtgaagtgttgaaaattgaaaaaa-tgggtgttgagggttgttgaatttattttaccattgtaaatagtctaa 55026699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 12974717 - 12974665
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||    
T  12974717 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaa 12974665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 47701080 - 47701176
Alignment:
Q  146 gttgaataagagagagaaaa-tgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||| |||| ||||||| | ||||| |||||| ||||||||| |||||| ||||||| | || |||| ||||||||| || ||||||    
T  47701080 gttgaataagagagaaaaaaatgatgtggagtgttgagaattg-aaaaagtgggtgttgagtgttgttgattggttttaaccattgtatatggtctaa 47701176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 50017108 - 50017048
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||| ||||||||||||||  | ||||||||||||| |||||||||| |||||||    
T  50017108 gttgaataagaaagagaaaatgatgtagagtgttgggaattga-aaaagtggattttgaatg 50017048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 27847458 - 27847407
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttga 204  Q
    ||||||||||||||||||||| | |||||| ||||| ||||||||||||||||    
T  27847458 taagagagagaaaatgatgtggagtgttggaaattg-aaaaagtggatgttga 27847407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 50734065 - 50733978
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | | |||| ||||| ||||||||||||||||   ||||| ||| | ||| |||||||||||| ||||    
T  50734065 taagagagagaaaatgatgtggagttttggaaattg-aaaaagtggatgttgaggattgttgaatatattttaccattgtaaatggtct 50733978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 50778790 - 50778877
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | | |||| ||||| ||||||||||||||||   ||||| ||| | ||| |||||||||||| ||||    
T  50778790 taagagagagaaaatgatgtggagttttggaaattg-aaaaagtggatgttgaggattgttgaatatattttaccattgtaaatggtct 50778877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 5845164 - 5845218
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||    
T  5845164 taagagagataaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 5845218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 222
Target Start/End: Original strand, 36178731 - 36178797
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgttttt 222  Q
    ||||||||||||||| |||| |||||||||||| ||||||||| ||||||| | |||| ||| |||||    
T  36178731 gagagagaaaatgatttgaagtgttgggaattg-aaaaagtgggtgttgaagggtgttgaattttttt 36178797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 53722492 - 53722450
Alignment:
Q  114 agtgttgaatgaaaaaccattgg--agagtaaaagttgaataa 154  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  53722492 agtgttgaatgaaaaaccattggagagagtaaaagttgaataa 53722450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 35472653 - 35472702
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||| ||||| | |||||||||||| |||||||||||||||||    
T  35472653 gagagagaaaataatgtggagtgttgggaattg-aaaaagtggatgttgaa 35472702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 35853210 - 35853248
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaa 184  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  35853210 gttgaataagagagagaaaatgatgtggagtgttgggaa 35853248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 37183861 - 37183950
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||||  ||||||  |||||| ||| | |||  ||||||||||| ||||||    
T  37183861 taagagagagaaaatgatgtggagtgttaggaattg-aaaaagtgagtgttgagggttgttgaatatattttgccattgtaaatggtctaa 37183950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 37410384 - 37410418
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  37410384 tggggtagagtgttgaatgaaaaaccattggagag 37410418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 42601470 - 42601504
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  42601470 tggggtagagtgttgaatgaaaaaccattggagag 42601504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 43022703 - 43022665
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaa 184  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  43022703 gttgaataagagagagaaaatgatgtggagtgttgggaa 43022665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 49710407 - 49710445
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaa 184  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  49710407 gttgaataagagagagaaaatgatgtggagtgttgggaa 49710445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 744265 - 744224
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaa 193  Q
    ||||||||||||||||||||| | |||||| |||||||||||    
T  744265 taagagagagaaaatgatgtggagtgttggtaattgaaaaaa 744224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 15493787 - 15493835
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  15493787 tggggtagagtgttgaatgaaaaatcattggagatggtaaaagttgaat 15493835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 49823135 - 49823168
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga 139  Q
    |||| |||||||||||||||||||||||||||||    
T  49823135 tggggtagagtgttgaatgaaaaaccattggaga 49823168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 6832425 - 6832382
Alignment:
Q  160 agaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttga 204  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||    
T  6832425 agaaaatgatgtggagtgttgggaattga-aaaagtggatgttga 6832382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 33795465 - 33795508
Alignment:
Q  111 tagagtgttgaatgaaaaaccattg--gagagtaaaagttgaat 152  Q
    |||||||||||||||||||| ||||  |||||||||||||||||    
T  33795465 tagagtgttgaatgaaaaactattgaagagagtaaaagttgaat 33795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 33795513 - 33795575
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||| ||||||||||| |   | ||||||||||| |||||||||||||||||||| ||||    
T  33795513 gttgaataagaaagagaaaatgagg---attgttgggaatt-aaaaaagtggatgttgaatggtgtt 33795575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 42601864 - 42601836
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga 139  Q
    |||||||||||||||||||||||||||||    
T  42601864 tagagtgttgaatgaaaaaccattggaga 42601836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 34199293 - 34199380
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||| ||||| ||| |||||||||||| ||||    
T  34199293 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaaggttgttgaatgtattttaccattgtaaatggtct 34199380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 39113773 - 39113868
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||| ||||||||||||||||| | |||||||||||| |||||||   |||||| ||||||| |||||||||||||||||||||| ||||||    
T  39113773 gttgaataaaagagagaaaatgatgtggagtgttgggaattg-aaaaagttagtgttgagtgttgttgaatgtttttcaccattgtaaatggtctaa 39113868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 6290648 - 6290561
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| |||||| ||||| ||| |||||||||||| ||||    
T  6290648 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgttgaatgtattttaccattgtaaatggtct 6290561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 3618477 - 3618566
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||||    
T  3618477 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatttgttttaccattgtaaatggtctaa 3618566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 40721083 - 40720994
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||| ||||| ||||| ||| |||||| ||||| ||||||    
T  40721083 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatattgttgaatgtattttaccattataaatggtctaa 40720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 3533331 - 3533418
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| ||| | |||||||||||| ||||    
T  3533331 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatatttgttaccattgtaaatggtct 3533418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 8991831 - 8991741
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||| ||||||| |||||| ||||| | | |||||||||||| |||||||    
T  8991831 taagagagagaaaatgatgtggagtgttgggaatt-caaaaagtgggtgttgaaggttgttgaatgtatattaccattgtaaatggtctaat 8991741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 28899380 - 28899291
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||||| ||||||  |||||| ||||| ||| |||||||||||| ||||||    
T  28899380 taagagagagaaaacgatgtggaatattgggaattga-aaaagtgggtgttgagggttgttgaatgtgtttaaccattgtaaatggtctaa 28899291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 33523318 - 33523229
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||| || ||  ||||  |||||||||||| ||||||    
T  33523318 taagagagagaaaatgatgtggaatgttgggaattga-aaaagtggatgttgagggttattgaaaattttcaaccattgtaaatggtctaa 33523229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 53184114 - 53184160
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||    
T  53184114 gttgaataagagagagaaaatgatgtgaagtgttgggaattgaaaaa 53184160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 56054065 - 56053978
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||| |  |||||| ||| | ||| |||||||||||| ||||    
T  56054065 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtggatgttaagggttgttgaatatgtttaaccattgtaaatggtct 56053978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 38173603 - 38173521
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||  |||||| ||| ||| | ||||||||||||    
T  38173603 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgagggttgttgaatatttgtgaccattgtaaat 38173521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 54356914 - 54356972
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||    
T  54356914 gttgaataagagaaagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaa 54356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 35809208 - 35809159
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  35809208 gagagagaaaatgatgtggaatgttgggaattga-aaaagtggatgttgaa 35809159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 48506630 - 48506719
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||  ||||||||| ||||||||||||  |||||| ||| | ||| |||||||||||| ||||||    
T  48506630 taagagagagaaaatgatgtggagtgttgaaaattgaaaa-agtggatgttgagggttgttgaatttgttttaccattgtaaatggtctaa 48506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 23540450 - 23540537
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||  | |||||| ||||| ||||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||    
T  23540450 taagagagagaaaatgatgttgagtgttggaaattg-aaaaagtgggtgttgaaggttgttgaatatgtttaaccattgtaaatagtct 23540537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 40596727 - 40596778
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattg--gagagtaaaagttgaataag 155  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  40596727 tggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataag 40596778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 55560503 - 55560554
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttga 204  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  55560503 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttga 55560554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 12158192 - 12158134
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||||||||||||||||| | |||||||||| | |||| ||||||||||||    
T  12158192 gttgaataagagagagaaaatgatgtggagtgttgggaatcg-aaaatgtggatgttgaa 12158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 31848792 - 31848839
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaa 193  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||    
T  31848792 gttgaataagagagagaaaatgatgtggagtgttggaaattgaaaaaa 31848839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 39049101 - 39049159
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||| ||||||||||||||| | |||||| |||| ||||||||||||||||||    
T  39049101 gttgaataagaaagagaaaatgatgtggagtgttggaaatt-aaaaaagtggatgttgaa 39049159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 46917535 - 46917589
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||    
T  46917535 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 46917589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 47750243 - 47750312
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||| ||| | || ||||||||| ||||||||||||||||||| |||| ||||    
T  47750243 gttgaataagagagagaaaatgacgtggagtg-tgggaattg-aaaaagtggatgttgaatggtgttgaatg 47750312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 34464047 - 34464100
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaat 206  Q
    |||||||||||||||||||||||||||||| |||| |||||||| | ||||||||    
T  34464047 taagagagagaaaatgatgtgaaatgttggaaatt-aaaaaagttggtgttgaat 34464100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 53348086 - 53348134
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgtt 202  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  53348086 aagagagagaaaatgatgtgaaatgttgataattg-aaaaagtggatgtt 53348134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 16020895 - 16020836
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||| ||||| | ||||||||||||| |||||||| ||||||| ||||||    
T  16020895 taagagagagaaaataatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgtt 16020836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 39418283 - 39418334
Alignment:
Q  105 atgggatagagtgttgaatgaaaaaccattg--gagagtaaaagttgaataa 154  Q
    |||||||||||||||||||||||||| ||||  |||||||||| ||||||||    
T  39418283 atgggatagagtgttgaatgaaaaactattgaagagagtaaaaattgaataa 39418334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 2215306 - 2215360
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||| |||||||||    
T  2215306 taagagagagaaaattatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 2215360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 18469332 - 18469379
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga-gtaaaagttgaat 152  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  18469332 tggggtagagtgttgaatgaaaaaccattggagaggtaaaaattgaat 18469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 33077901 - 33077979
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||||||||||| | |||||| ||||| ||||||||||| ||||  |||||| ||| | ||| ||||||||||||    
T  33077901 agagagaaaatgatgtggagtgttggaaattg-aaaaagtggatattgagggttgttgaatttgttttaccattgtaaat 33077979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 4981554 - 4981505
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||||||||||| |||||||| |||||||    
T  4981554 gagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaa 4981505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 193
Target Start/End: Original strand, 13094417 - 13094455
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaa 193  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  13094417 gagagagaaaatgatgtggagtgttgggaattgaaaaaa 13094455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 13110609 - 13110520
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||| |||||| |||| | ||||||||||||| |||||||| |||| |  |||||| ||| ||| | |||||||||||| ||||||    
T  13110609 taagagagaaaaaatgttgtggagtgttgggaattga-aaaagtgggtgttaagcgttgttgaatatttgtgaccattgtaaatggtctaa 13110520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 17329940 - 17329988
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  17329940 gagagagaaaatgatgtggaatgtt-ggaattg-aaaaagtggatgttgaa 17329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 31848739 - 31848773
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  31848739 tggggtagagtgttgaatgaaaaaccattggagag 31848773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 45081439 - 45081488
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | |||||||||||| ||||||||| |||||||    
T  45081439 gagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaa 45081488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 53184061 - 53184095
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  53184061 tggggtagagtgttgaatgaaaaaccattggagag 53184095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 55930 - 55979
Alignment:
Q  143 aaagttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||||||||||| ||||||||||| | | |||||| ||||||||||    
T  55930 aaagttgaataagagaaagaaaatgatgcggagtgttggaaattgaaaaa 55979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 10089954 - 10089906
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||    
T  10089954 tggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaat 10089906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 19272828 - 19272791
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||||||||||||| | |||||||||||||||||    
T  19272828 gagagagaaaatgatgtggagtgttgggaattgaaaaa 19272791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 33604705 - 33604665
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  33604705 taagatagagaaaatgatgtggagtgttgggaattgaaaaa 33604665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 34564178 - 34564119
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaat 206  Q
    ||||||||||||||||||||| || | || ||||| ||||| |||||| ||||||||||||    
T  34564178 gttgaataagagagagaaaataatataaagtgttgagaatt-aaaaaaatggatgttgaat 34564119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 47159519 - 47159607
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||  ||||||||||||||||| |||||| ||||| ||| |||||||||||| ||||||    
T  47159519 taagagagagaaaatgatgtggagtgttgggaatt--aaaaagtggatgttgaaggttgttgaatgtattttaccattgtaaatggtctaa 47159607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 36518563 - 36518474
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| ||| || ||||| ||| |||||||||||| ||||||    
T  36518563 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttattgaatgtattttaccattgtaaatggtctaa 36518474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 22737613 - 22737678
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||||||| ||||    
T  22737613 gttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatgctgtt 22737678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 37887895 - 37887813
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||| ||||||||||| | |||||||||||||||||| |||||||||||  ||||| ||| | ||| ||||||||||||    
T  37887895 taagagagataaaatgatgtggagtgttgggaattgaaaaaa-tggatgttgaagattgttgaatttattttaccattgtaaat 37887813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Original strand, 25218773 - 25218891
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagtt-----------gaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||           ||||||||||||||||||||| |||| |||||| ||||| ||||    
T  25218773 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttaaatgagtattgaataagagagagaaaatgatatgaagtgttggaaattg-aaaa 25218871  T
Q  193 agtggatgttgaatgttgtt 212  Q
    |||||||||| |||| ||||    
T  25218872 agtggatgttaaatggtgtt 25218891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 28318067 - 28318126
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||||||| || ||||||    
T  28318067 taagagagagaaaatgatgtggagtgttgggaatt-aaaaaagtggatgttaaaggttgtt 28318126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 33078809 - 33078896
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||| | ||| | |||||||||||| ||||||||||||||||  |||||| ||| | ||| |||||||||||| ||||    
T  33078809 taagagagagaaaataacgtggagtgttgggaattg-aaaaagtggatgttgagggttgttgaatatgtttaaccattgtaaatggtct 33078896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 35029133 - 35029173
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35029133 taagagagagaaaatgatgtggaatgttgggaattgaaaaa 35029173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 42881406 - 42881355
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttga 204  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  42881406 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtggatgttga 42881355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 5813146 - 5813092
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  5813146 taagagagagaaaatgatgtgcagtgttgggaattga-aaaagtgggtgttgaatg 5813092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 22191274 - 22191205
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||||||| | |||||| ||||| ||||||||| ||||||||| |||| ||||    
T  22191274 gttgaataagagagagaaaatgatgtggagtgttggaaattg-aaaaagtgg-tgttgaatggtgttgaatg 22191205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 35193086 - 35193132
Alignment:
Q  108 ggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||    
T  35193086 ggatagagtgttgaatgaaaaaccattggagatggtaaaagttgaat 35193132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 21654900 - 21654854
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||    
T  21654900 gttgaataagagagagaaaatgatgtggagtgttggaaattgaaaaa 21654854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 40302515 - 40302604
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||| ||| ||   ||||| ||| ||| | |||||||||||| ||||||    
T  40302515 taagagagagaaaatgatgtggagtgttgggaattgaaaaaa-tgggtgtcgaggattgttgaatatttgtgaccattgtaaatggtctaa 40302604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 24793598 - 24793550
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||| |||||||||||||||||||||||||||||  |||||||||||||    
T  24793598 tggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaat 24793550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 30630779 - 30630891
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagttga-----------ataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||           |||||||||||||||| ||||| | ||||||||||| |||||    
T  30630779 tggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtattgaataagagagagaaaataatgtggagtgttgggaatt-aaaaa 30630877  T
Q  193 agtggatgttgaatg 207  Q
    ||||| |||||||||    
T  30630878 agtgg-tgttgaatg 30630891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 37951793 - 37951713
Alignment:
Q  154 agagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    |||||| ||||||||| || | ||||||||||||||||| || | ||||||| |||||| ||||| ||| ||||||||||||    
T  37951793 agagagggaaaatgatatggagtgttgggaattgaaaaa-gtaggtgttgaaggttgttgaatgtattttaccattgtaaat 37951713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 25038614 - 25038661
Alignment:
Q  149 gaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtgg 197  Q
    |||||||||||||||||||||||||| || |||||||| ||||||||||    
T  25038614 gaataagagagagaaaatgatgtgaagtgctgggaatt-aaaaaagtgg 25038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 33508550 - 33508638
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||| ||  | |||||||||||||||||| ||| ||||||  |||||| ||  ||||  |||||||||||| ||||    
T  33508550 taagagagagaaaatgacgtagagtgttgggaattgaaaaaaatgggtgttgagggttgttgaaacttttgaaccattgtaaatggtct 33508638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 43202157 - 43202228
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatg-ttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||| ||||||||||||||| ||||||| || ||||| |||| |||||||||||||||||| ||||| ||||    
T  43202157 gttgagtaagagagagaaaataatgtgaagtgattgggcattg-aaaaagtggatgttgaattttgttgaatg 43202228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 114544 - 114486
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||||||||||||||||| | ||||| |||||  ||||||||| |||||||    
T  114544 gttgaataagagagagaaaatgatgtggagtgttgagaatt-taaaaagtgggtgttgaa 114486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 21654953 - 21654919
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  21654953 tggggtagagtgttgaatgaaaaaccattggagag 21654919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 43571112 - 43571150
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaa 184  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  43571112 gttgaataagagagagaaaatgatgtggagtgttgggaa 43571150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 48984961 - 48984915
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||||||    
T  48984961 gttgaataagagagagaaaatgatgtggagcgttggaaattgaaaaa 48984915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 22737560 - 22737593
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga 139  Q
    |||| |||||||||||||||||||||||||||||    
T  22737560 tggggtagagtgttgaatgaaaaaccattggaga 22737593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 37888575 - 37888523
Alignment:
Q  177 gttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattg 230  Q
    |||||||||||||||| |||||||||||||| |||| ||||| ||| |||||||    
T  37888575 gttgggaattgaaaaa-gtggatgttgaatggtgttgaatgtgtttaaccattg 37888523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 48985014 - 48984981
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga 139  Q
    |||| |||||||||||||||||||||||||||||    
T  48985014 tggggtagagtgttgaatgaaaaaccattggaga 48984981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 30566648 - 30566608
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  30566648 taagagagagaaaatgatgtggagtgttgagaattgaaaaa 30566608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 30720168 - 30720128
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  30720168 taagagagagaaaatgatgtggagtgttggaaattgaaaaa 30720128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 32130298 - 32130345
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttg 203  Q
    |||||||||||||||||| | ||||||||||| |||||||||| |||||    
T  32130298 gagagagaaaatgatgtggagtgttgggaatt-aaaaaagtgggtgttg 32130345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 17783481 - 17783368
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattgg--agagtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| ||||||||||||||||||||||||||  |||||||||           ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  17783481 tggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggaatgttgggaatt-aaaaa 17783383  T
Q  193 agtggatgttgaatg 207  Q
    |||||||||||||||    
T  17783382 agtggatgttgaatg 17783368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 41542432 - 41542316
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag--taaaagttgaat---------aagagagagaaaatgatgtgaaatgttgggaattgaaaaaag 194  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||         ||||||||||| |||||||| | ||||||||||||| |||||    
T  41542432 tggggtagagtgttgaatgaaaaaccattggagaggataaaagttgaatgagttgaataagagagagaatatgatgtggagtgttgggaattga-aaaag 41542334  T
Q  195 tggatgttgaatgttgtt 212  Q
    ||||||||||||| ||||    
T  41542333 tggatgttgaatgatgtt 41542316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 2478352 - 2478439
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||    
T  2478352 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatttgttttaccattgtaaatggtct 2478439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 3755046 - 3755128
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccatt 229  Q
    ||||||||||||||||||||||||||  | ||||| |||||| |||||||||||| |||||| |||| ||||||||| ||||||    
T  3755046 gttgaataagagagagaaaatgatgtagagtgttgagaattg-aaaaagtggatgctgaatggtgttgaatgttttttaccatt 3755128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 8464203 - 8464085
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattgg--agagtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| ||||||||||||||||||||||||||  |||||||||           ||||||||||||||||||||||||||| | ||||| |||||| ||||    
T  8464203 tggggtagagtgttgaatgaaaaaccattggagagagtaaaaattgaatgagtgttgaataagagagagaaaatgatgtggagtgttgagaattg-aaaa 8464105  T
Q  193 agtggatgttgaatgttgtt 212  Q
    ||||||||||||||| ||||    
T  8464104 agtggatgttgaatggtgtt 8464085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 229
Target Start/End: Complemental strand, 8468369 - 8468293
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccatt 229  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||  |||||| ||||||||| ||||||    
T  8468369 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgagggttgttgaatgtttttaaccatt 8468293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 44334340 - 44334280
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||||||||    
T  44334340 gttgaataagagagagaaaatgatgtggagtgttgagaattga-aaaagtggatgttgaatg 44334280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 44929308 - 44929368
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  44929308 gttgaataaaagagagaaaatgatttgaaatgttgagaattgaaaaaa-tggatgttgaatg 44929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 48388132 - 48388219
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||| ||| ||  | |||||||||||| ||||    
T  48388132 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttgttgaatattagttaccattgtaaatggtct 48388219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 51494496 - 51494583
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||||| ||||||| |||||| ||| | ||| |||||||||||| ||||    
T  51494496 taagagagagaaaatgatgtggagtgttgagaatt-aaaaaagtgggtgttgaaggttgttgaatatattttaccattgtaaatggtct 51494583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 36230402 - 36230320
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||| | ||||||  |||||| ||||| ||| ||||||||||||    
T  36230402 taagagagataaaatgatgtgaagtgttgggaattga-aaaagttggtgttgagggttgttgaatgtgtttaaccattgtaaat 36230320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 44451288 - 44451334
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  44451288 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 44451334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 44651177 - 44651078
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||| | |||||||||||||||||    
T  44651177 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 44651078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 19578934 - 19578985
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttga 204  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  19578934 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttga 19578985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 31159432 - 31159345
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| ||||||||  |||||| ||  ||||  |||||||||||| ||||    
T  31159432 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtagatgttgagggttgttgaaacttttcaaccattgtaaatggtct 31159345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 48404375 - 48404288
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| |||||| | ||||||  |||||| ||| ||| | |||||||||||| ||||    
T  48404375 taagagagagaaaatgatgtggagtgttgggaattga-aaaagttggtgttgagggttgttgaatatttgtgaccattgtaaatggtct 48404288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 31468178 - 31468124
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  31468178 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 31468124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 643840 - 643886
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  643840 gttgaataagagagagaaaatgacgtggagtgttgggaattgaaaaa 643886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 45239182 - 45239129
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  45239182 aagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 45239129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 52933732 - 52933781
Alignment:
Q  105 atgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  52933732 atggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaat 52933781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 52941367 - 52941416
Alignment:
Q  105 atgggatagagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  52941367 atggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaat 52941416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 29523748 - 29523696
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| |||||||    
T  29523748 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaa 29523696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 45623554 - 45623641
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||| ||||||| ||||||| ||||||||  |||||| ||| | |||  ||||||||||| ||||    
T  45623554 taagagagagaaaatgatgtggagtgttaggaattg-aaaaagtagatgttgagagttgttgaatatattttgccattgtaaatggtct 45623641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 27630484 - 27630538
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||    
T  27630484 taagagagataaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 27630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 29919415 - 29919325
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    |||||||||||||||||| || | ||||||||||||| |||||| ||||||||   ||||| ||| | |||  ||||||||||| |||||||    
T  29919415 taagagagagaaaatgatatggagtgttgggaattga-aaaagtagatgttgaggtttgttgaatatattttgccattgtaaatggtctaat 29919325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 36303079 - 36303037
Alignment:
Q  113 gagtgttgaatgaaaaaccattggaga--gtaaaagttgaata 153  Q
    |||||||||||||||||||||||||||  ||||||||||||||    
T  36303079 gagtgttgaatgaaaaaccattggagagggtaaaagttgaata 36303037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 37420368 - 37420422
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||    
T  37420368 taagagagataaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 37420422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 48729373 - 48729315
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    ||||||||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||    
T  48729373 gttgaataagaaagagaaaatgatgtgaagtgttaaaaattgaaaaaa-tggatgttgaa 48729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 20584873 - 20584915
Alignment:
Q  150 aataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||||||| |||||||||||||| | |||||||||||||||||    
T  20584873 aataagagtgagaaaatgatgtggagtgttgggaattgaaaaa 20584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 35847148 - 35847197
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | |||||| |||| ||||||||||||||||||    
T  35847148 gagagagaaaatgatgtggagtgttggaaatt-aaaaaagtggatgttgaa 35847197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 44451235 - 44451269
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  44451235 tggggtagagtgttgaatgaaaaaccattggagag 44451269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 44929255 - 44929289
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  44929255 tggggtagagtgttgaatgaaaaaccattggagag 44929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 48729419 - 48729378
Alignment:
Q  113 gagtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  48729419 gagtgttgaatgaaaaaccattggagagggtaaaagttgaat 48729378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 52933786 - 52933832
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  52933786 gttgaataagagagagaaaatgacgtggagtgttaggaattgaaaaa 52933832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 52941421 - 52941467
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||| ||| | |||| ||||||||||||    
T  52941421 gttgaataagagagagaaaatgacgtggagtgttaggaattgaaaaa 52941467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 23092814 - 23092774
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  23092814 taagagagagaaaatgacgtggagtgttgggaattgaaaaa 23092774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 30878568 - 30878608
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  30878568 taagagagagaaaatgatgtggagtgttggaaattgaaaaa 30878608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 37646584 - 37646624
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | ||||||||||| |||||    
T  37646584 taagagagagaaaatgatgtggagtgttgggaattaaaaaa 37646624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 37691314 - 37691354
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||| ||||| | |||||||||||||||||    
T  37691314 taagagagagaaaataatgtggagtgttgggaattgaaaaa 37691354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 45456175 - 45456215
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||| ||||| | |||||||||||||||||    
T  45456175 taagagagagaaaattatgtggagtgttgggaattgaaaaa 45456215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 8669937 - 8669855
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||||||||||| ||||||| |||||| |||||||||| |||||||||||| |||||| ||||| ||| ||||||||||||    
T  8669937 taagagagagaaaataatgtgaagtgttggaaattgaaaaa-gtggatgttgaaggttgttgaatgtattttaccattgtaaat 8669855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 29428536 - 29428596
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||    
T  29428536 gttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaatg 29428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 8660606 - 8660517
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||| ||||||| |||||| ||||  ||| || ||||||||| ||||||    
T  8660606 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaaggttgttgaatgggttttacaattgtaaatggtctaa 8660517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 32359799 - 32359753
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||    
T  32359799 gttgaataagagagagaaaatgatgtggaatgttgggaattgaaaaa 32359753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 34838628 - 34838541
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||  ||||||| ||| || ||||| ||| |||||||||||| ||||    
T  34838628 taagagagagaaaatgatgtggagtgttgggaattga-aaaagtgagtgttgaaggttattgaatgtattttaccattgtaaatggtct 34838541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 6380507 - 6380553
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  6380507 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 6380553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 30446291 - 30446202
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||| ||||||||||||| ||| ||||||  |||||| ||| | ||| |||||||||||| ||||||    
T  30446291 taagagagagaaaatgatgtggagtgttaggaattgaaaaaa-tgggtgttgagggttgttgaatttgttttaccattgtaaatggtctaa 30446202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 10883919 - 10883832
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||| ||||| ||||||||||||||||  |||||| ||  ||||  |||||||||||| ||||    
T  10883919 taagagagagaaaatgatgtggagtgttggaaattg-aaaaagtggatgttgagggttgttgaaacttttcaaccattgtaaatggtct 10883832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 197851 - 197797
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||    
T  197851 taagagagagaaaatgacgtggagtgttgggaattga-aaaagtggatgttgaatg 197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 631564 - 631511
Alignment:
Q  153 aagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||| | ||||||||||||| |||||||| |||||||||    
T  631564 aagagagagaaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 631511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 17961288 - 17961342
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||| ||||| | |||||||||||| ||||||||| |||||||||    
T  17961288 taagagagagaaaattatgtggagtgttgggaattg-aaaaagtgggtgttgaatg 17961342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 217
Target Start/End: Complemental strand, 22627889 - 22627819
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||| ||||||||||||||||| | |||||| ||||| |||| |||| |||||| ||||||| ||||    
T  22627889 gttgaataaaagagagaaaatgatgtggagtgttggaaattg-aaaacgtgggtgttgagtgttgttgaatg 22627819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 34328328 - 34328274
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||| ||||||||||| | ||||||||||||| |||||||| |||||||||    
T  34328328 taagagagataaaatgatgtggagtgttgggaattga-aaaagtgggtgttgaatg 34328274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 6380454 - 6380488
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  6380454 tggggtagagtgttgaatgaaaaaccattggagag 6380488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 6725643 - 6725681
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaa 184  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  6725643 gttgaataagagagagaaaatgatgtggagtgttgggaa 6725681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 8219052 - 8219004
Alignment:
Q  106 tgggatagagtgttgaatga-aaaaccattggaga-gtaaaagttgaat 152  Q
    |||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  8219052 tggggtagagtgttgaatgaaaaaaccattggagaggtaaaagttgaat 8219004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 12501879 - 12501839
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | ||||| |||||||||||    
T  12501879 taagagagagaaaatgatgtggattgttgagaattgaaaaa 12501839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 192
Target Start/End: Complemental strand, 24348476 - 24348440
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||| | |||||||||||||||||    
T  24348476 agagagaaaatgatgtggagtgttgggaattgaaaaa 24348440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 35931909 - 35931820
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    ||||||||||||||||||||| | |||||| |||||||||| |||||||||||| |||||| ||| | ||| |||||||||||| ||||||    
T  35931909 taagagagagaaaatgatgtggagtgttggaaattgaaaaa-gtggatgttgaaggttgttgaatttgttttaccattgtaaatggtctaa 35931820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 29637177 - 29637261
Alignment:
Q  150 aataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaat 235  Q
    ||||||| ||||||||| ||||| | |||||| ||||||||||| |||||||| | ||||||| ||||||||||||||||||||||    
T  29637177 aataagaaagagaaaattatgtggagtgttggaaattgaaaaaa-tggatgttaagtgttgttgaatgtttttcaccattgtaaat 29637261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 1958204 - 1958291
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||| ||| || ||||| ||| |||||||||||| ||||    
T  1958204 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgaaggttattgaatgtattttaccattgtaaatggtct 1958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 41477236 - 41477171
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||||||||||||||||| ||| | ||||||||||||| |||||||||||||||||| ||||    
T  41477236 gttgaataagagagagaaaatgacgtggagtgttgggaattga-aaaagtggatgttgaatggtgtt 41477171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 17741764 - 17741705
Alignment:
Q  147 ttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    |||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||    
T  17741764 ttgaataagagagagaaaatgatgtggagtcttgggaattga-aaaagtggatgttgaatg 17741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 18029517 - 18029588
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgt 218  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||||||||| ||| ||||| |||| |||||    
T  18029517 gttgaataagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgtcgaatggtgttgaatgt 18029588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 23353205 - 23353296
Alignment:
Q  150 aataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    |||||||||||||||  |||||| | |||||| |||||||||| ||||| ||||| ||||||| | || ||||||||||||||||| ||||||    
T  23353205 aataagagagagaaagggatgtggagtgttggaaattgaaaaa-gtggacgttgagtgttgttgattgcttttcaccattgtaaatggtctaa 23353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 30470836 - 30470906
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||| ||||| ||||||| |||| ||||    
T  30470836 gttgaataagagagagaaaatgacgtggagtgttgggaattgaaaaaa-tggatcttgaatggtgttgaatg 30470906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 34955684 - 34955730
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||    
T  34955684 gttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 34955730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 36912523 - 36912405
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggaga--gtaaaa-----------gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    |||| |||||||||||||||||||||||||||||  ||||||           ||||||||||||||||||||||||||  | |||||||||||| ||||    
T  36912523 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtagagtgttgggaattg-aaaa 36912425  T
Q  193 agtggatgttgaatgttgtt 212  Q
    ||||| ||||||||| ||||    
T  36912424 agtgggtgttgaatggtgtt 36912405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 5212344 - 5212285
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||||||| |||||||||    
T  5212344 gttgaataagagagagaaaatgatgtggagtgttgggaatt-aaaaaagtgg-tgttgaatg 5212285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 45101049 - 45101136
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||  |||||| ||| | |||  ||||||||||| ||||    
T  45101049 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgagggttgttgaatatattttgccattgtaaatggtct 45101136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 15053679 - 15053589
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||||||| | | ||||||||||||| |||||||| ||||||   ||||| ||| ||| | |||||||||||| |||||||    
T  15053679 taagagagagaaaatgatgcggagtgttgggaattga-aaaagtgggtgttgatgattgttgaatatttgtgaccattgtaaatggtctaat 15053589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 26632171 - 26632241
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||| |||   |||||||||||| ||||||||| ||||||||| |||| ||||    
T  26632171 gttgaataagagagagaaaatgacgtggcgtgttgggaattg-aaaaagtgggtgttgaatggtgttgaatg 26632241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 38584912 - 38584982
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||||||||||| ||| | |||||||||||| ||||||||  ||||||||| |||| ||||    
T  38584912 gttgaataagagagagaaaatgacgtggagtgttgggaattg-aaaaagtgtgtgttgaatggtgttgaatg 38584982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 39811076 - 39811147
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatg 217  Q
    ||||||||||||||| ||||||||||| | || | |||||| |||||||||| ||||||||| |||| ||||    
T  39811076 gttgaataagagagataaaatgatgtggagtgctaggaattaaaaaaagtgggtgttgaatggtgttgaatg 39811147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 43524418 - 43524504
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaa 242  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||| | | || ||  ||||| ||||||||| || ||||||    
T  43524418 gagagagaaaatgatgtggagtgttgggaattg-aaaaagtggatgttgaagggtattgaaattttttaaccattgtacatggtctaa 43524504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 8609999 - 8610064
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgtt 212  Q
    ||||||||| |||||||||||||| || | |||||||||||| |||||||| |||||||||| ||||    
T  8609999 gttgaataaaagagagaaaatgatatggagtgttgggaattg-aaaaagtgaatgttgaatggtgtt 8610064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 13815000 - 13814954
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||||||||| | |||||| ||||||||||    
T  13815000 gttgaataagagagagaaaatgatgtggagtgttggaaattgaaaaa 13814954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 30289749 - 30289815
Alignment:
Q  147 ttgaataagagagagaaaatgatgtgaaatgttgggaattg-aaaaaagtggatgttgaatgttgtt 212  Q
    |||||||||||||||||||||||||  | ||||| |||||| |||||||||||| ||||||| ||||    
T  30289749 ttgaataagagagagaaaatgatgtagagtgttgagaattgaaaaaaagtggatattgaatggtgtt 30289815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 40283519 - 40283470
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  40283519 gagagagaaaatgatgtggagtgttgggaattga-aaaagtggatgttgaa 40283470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 42860767 - 42860721
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||    
T  42860767 gttgaataagaaagagaaaatgatgtggagtgttgggaattgaaaaa 42860721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 30470783 - 30470831
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattg--gagagtaaaagttgaat 152  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||    
T  30470783 tggggtagagtgttgaatgaaaaaccattgaagagagtaaaagttgaat 30470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 12272506 - 12272593
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||| ||| | |||||  ||||||||| ||||||||||||  |||||| ||| | ||| |||||||||||| ||||    
T  12272506 taagagagagaaaatgaagtggagtgttgaaaattgaaaa-agtggatgttgagggttgttgaatttattttaccattgtaaatagtct 12272593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 31129527 - 31129606
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgta 232  Q
    ||||||||||||||||||||| | ||||| |||||| ||||||| | |||||| ||||||| |||| |||| || ||||||    
T  31129527 taagagagagaaaatgatgtggagtgttgagaattg-aaaaagttggtgttgagtgttgttaaatgattttaacaattgta 31129606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 42859972 - 42859932
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  42859972 taagagagagaaaatgatgtggagtgttgggaattgaaaaa 42859932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 35099482 - 35099428
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||  | ||||||||||||| |||||||| |||||||||    
T  35099482 taagagagagaaaatgatgtagagtgttgggaattga-aaaagtgggtgttgaatg 35099428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 43525117 - 43525203
Alignment:
Q  156 agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtctaat 243  Q
    ||||||||||||||||| | |||||| ||||| ||||||||| ||||||  |||||| ||| | ||| ||||| |||||| |||||||    
T  43525117 agagagaaaatgatgtggagtgttggaaattg-aaaaagtgggtgttgagggttgttgaatttgttttaccatcgtaaatggtctaat 43525203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 43618373 - 43618427
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatg 207  Q
    ||||||||||||||||||||| | |||||||||||| | ||||||| |||||||||    
T  43618373 taagagagagaaaatgatgtggagtgttgggaattg-ataaagtgggtgttgaatg 43618427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 4625512 - 4625558
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||||||| || || | |||||||||||||||||    
T  4625512 gttgaataagagagagaaaataatttggagtgttgggaattgaaaaa 4625558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 17494519 - 17494553
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  17494519 tggggtagagtgttgaatgaaaaaccattggagag 17494553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Original strand, 18029464 - 18029498
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattggagag 140  Q
    |||| ||||||||||||||||||||||||||||||    
T  18029464 tggggtagagtgttgaatgaaaaaccattggagag 18029498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 26244541 - 26244492
Alignment:
Q  155 gagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaa 205  Q
    |||||||||||||||||| | ||||||||||||| ||||||| ||||||||    
T  26244541 gagagagaaaatgatgtggagtgttgggaattga-aaaagtgaatgttgaa 26244492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 152
Target Start/End: Complemental strand, 7990529 - 7990489
Alignment:
Q  114 agtgttgaatgaaaaaccattggaga--gtaaaagttgaat 152  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  7990529 agtgttgaatgaaaaaccattggagagggtaaaagttgaat 7990489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 41477284 - 41477256
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga 139  Q
    |||||||||||||||||||||||||||||    
T  41477284 tagagtgttgaatgaaaaaccattggaga 41477256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 44503214 - 44503174
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||||||||||||||| ||| | |||||||||||||||||    
T  44503214 taagagagagaaaatgacgtggagtgttgggaattgaaaaa 44503174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 57767 - 57854
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattgtaaattgtct 240  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||| ||||||  |||||| ||||||| | |||||| ||||| ||||    
T  57767 taagagagagaaaatgatgtggagtgttgggaattg-aaaaagtgggtgttgagggttgttgaatgtttgtgaccattataaatggtct 57854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 212
Target Start/End: Complemental strand, 124115 - 124004
Alignment:
Q  111 tagagtgttgaatgaaaaaccattggaga--gtaaaagttgaataag---------agagagaaaatgatgtgaaatgttgggaattgaaaaaagtggat 199  Q
    |||||||||||||||||||||||||||||  ||||||||||||| ||         ||||| ||||||||||| | |||||| ||||| |||||||||||    
T  124115 tagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataagagaaaaaatgatgtggagtgttggaaattg-aaaaagtggat 124017  T
Q  200 gttgaatgttgtt 212  Q
    |||||||| ||||    
T  124016 gttgaatggtgtt 124004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 30503 - 30554
Alignment:
Q  106 tgggatagagtgttgaatgaaaaaccattg--gagagtaaaagttgaataag 155  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  30503 tggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataag 30554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 30556 - 30639
Alignment:
Q  146 gttgaataagagagagaaaatgatgtgaaatgttgggaattgaaaaaagtggatgttgaatgttgttcaatgtttttcaccattg 230  Q
    ||||||||||||||||||||| || || | ||||| |||||| ||||||||||||||||||| |||| ||||  ||| |||||||    
T  30556 gttgaataagagagagaaaattatatggagtgttgagaattg-aaaaagtggatgttgaatggtgttgaatgggtttaaccattg 30639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 192
Target Start/End: Original strand, 5347 - 5387
Alignment:
Q  152 taagagagagaaaatgatgtgaaatgttgggaattgaaaaa 192  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  5347 taagaaagagaaaatgatgtggagtgttgggaattgaaaaa 5387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University