View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6294_low_26 (Length: 241)
Name: NF6294_low_26
Description: NF6294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6294_low_26 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21179269 - 21179035
Alignment:
| Q |
1 |
atggattagaacccatgacctctggttaagttagaagaaatatcttatcatcccatccaagtgttcttgggtgttttagtcgtcaaattgagttaataaa |
100 |
Q |
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| T |
21179269 |
atggattagaacccatgacctctggttaagttagaagaaatatcttatcatcccatccaagtgctcttgagtgttttagtcgtcaaattgagttaagaaa |
21179170 |
T |
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| Q |
101 |
gaatgagtttattccaatcgctaattgaaaggattagtggtattgagatagaatcaagttgtatgaatgtaatagtattgtactacattgtttggattag |
200 |
Q |
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| T |
21179169 |
gaatgagtttattccaatcgctaattgaaaggattagtggtattgagatagaatcaagttgtatgaatgtaatagtattgtactacattgtttggattag |
21179070 |
T |
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| Q |
201 |
aatgtagatatgtgatgagattagatgatgtccat |
235 |
Q |
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| T |
21179069 |
aatgtagatatgtgatgagattagatgatatccat |
21179035 |
T |
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