View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6295_high_40 (Length: 243)
Name: NF6295_high_40
Description: NF6295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6295_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 31254265 - 31254492
Alignment:
| Q |
1 |
ttataaaaaatgatattgctaatgaatgcattgaaaatatattggttaaagagttaataaaataaaagtttgtattacaaatatattttaaacatttctc |
100 |
Q |
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| T |
31254265 |
ttataaaaaatgatattgctaatgaatgcattgaaaatatattggttaaagagttaataaaataaaagtgtgtattacaaatatattttaaacatttctc |
31254364 |
T |
|
| Q |
101 |
aatataataaaacattatcatgtacatactttacctctttaaattgcttaaacaatacgtggaaagacaatggttaacatctgcttaag---agaaaatg |
197 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| |||| | |||||| |
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| T |
31254365 |
aatataataaaacattatcatgtatatactttacctctttaaattacttaaacaatacgtgg-aagacaatggttaacatttgcctaagaaaaaaaaatg |
31254463 |
T |
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| Q |
198 |
gattacactttaaaacaatttggacataa |
226 |
Q |
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||||||||||||||| |||||||||||| |
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| T |
31254464 |
gattacactttaaaatcatttggacataa |
31254492 |
T |
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