View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6295_high_41 (Length: 239)
Name: NF6295_high_41
Description: NF6295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6295_high_41 |
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Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 27776446 - 27776281
Alignment:
| Q |
18 |
catggtgccccaaatactagttatgtcttgttggccattgggaaggtttatgggaatgggtttaaagaggcgcacaacacagaagtannnnnnnnatttc |
117 |
Q |
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| T |
27776446 |
catggtgccccaaatactagttatgtcttgttggccattgggaaggtttatgggaatgggtttaaagaggcacataacacacaagtattttttttatttc |
27776347 |
T |
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| Q |
118 |
actatctatattttctttaattgcctcttaatgataattttacagtaactcaccttgtttaatata |
183 |
Q |
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| T |
27776346 |
actatctttattttctttaattgcctcttaatgataattttacaataactcaccttgtttaatata |
27776281 |
T |
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