View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6295_low_22 (Length: 286)
Name: NF6295_low_22
Description: NF6295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6295_low_22 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 16 - 286
Target Start/End: Original strand, 31254010 - 31254280
Alignment:
| Q |
16 |
aggaatcggcaagactctatggaatcatatctacatagatgcaaaaccaagctatattccctaactaaatactctttctaagtaccttattataagagtc |
115 |
Q |
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| T |
31254010 |
aggaatcggcaagactctatggaatcatatctacatagatgcaaaaccaagctatattccctaactaaatactctttctaagtaccttattataagagtc |
31254109 |
T |
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| Q |
116 |
tttagtgaagggtattagaaaaatatagttgcagtgataaaatcgtttgataccattagagaaagaaagaaattacgtctctcaacagggtaaactaaat |
215 |
Q |
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| T |
31254110 |
tttagtgaagggtattagaaaaatatagttgcagtgataaaatcgtttgataccattagagaaagaaagaaattacgtctctcaacagggtaaactaaat |
31254209 |
T |
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| Q |
216 |
ggaaacatttttatgtatgtttgttatcacgacaaatttatcgaaaccataacttttataaaaaatgatat |
286 |
Q |
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| T |
31254210 |
agaaacatttttatgcatgtttgttatcacgacgaatttatcgaaaccataatttttataaaaaatgatat |
31254280 |
T |
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