View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6296_high_1 (Length: 554)

Name: NF6296_high_1
Description: NF6296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6296_high_1
NF6296_high_1
[»] chr8 (40 HSPs)
chr8 (7-504)||(3741602-3742102)
chr8 (7-450)||(29315563-29315988)
chr8 (180-450)||(36682665-36682936)
chr8 (59-440)||(34146204-34146589)
chr8 (158-415)||(34038989-34039251)
chr8 (50-134)||(36682570-36682653)
chr8 (59-345)||(1358679-1358974)
chr8 (217-415)||(5870931-5871130)
chr8 (64-245)||(3443603-3443788)
chr8 (259-345)||(14896813-14896901)
chr8 (59-134)||(16599365-16599441)
chr8 (381-450)||(32233942-32234011)
chr8 (163-352)||(38457401-38457592)
chr8 (66-134)||(2742926-2742994)
chr8 (267-390)||(1256445-1256568)
chr8 (149-352)||(30887647-30887853)
chr8 (146-245)||(16599240-16599340)
chr8 (59-115)||(25496670-25496726)
chr8 (59-126)||(14896650-14896717)
chr8 (56-115)||(40557229-40557287)
chr8 (56-134)||(41411454-41411530)
chr8 (59-182)||(7578144-7578271)
chr8 (59-325)||(7695086-7695358)
chr8 (59-115)||(9455255-9455311)
chr8 (59-134)||(38401587-38401663)
chr8 (59-134)||(1530584-1530658)
chr8 (72-115)||(4418603-4418646)
chr8 (66-125)||(38457299-38457358)
chr8 (59-126)||(39628286-39628353)
chr8 (59-126)||(39637836-39637903)
chr8 (59-134)||(16393725-16393802)
chr8 (59-93)||(30887895-30887929)
chr8 (52-126)||(45083023-45083097)
chr8 (500-533)||(3742114-3742147)
chr8 (59-134)||(32233649-32233726)
chr8 (166-242)||(43026562-43026639)
chr8 (59-115)||(5870776-5870832)
chr8 (59-115)||(25400491-25400547)
chr8 (59-115)||(27231794-27231850)
chr8 (1-50)||(34146170-34146221)
[»] chr6 (26 HSPs)
chr6 (7-504)||(26252222-26252714)
chr6 (59-415)||(25056511-25056858)
chr6 (306-450)||(2437525-2437669)
chr6 (59-327)||(6110915-6111192)
chr6 (59-445)||(14093466-14093855)
chr6 (259-415)||(9353290-9353444)
chr6 (259-440)||(8049379-8049561)
chr6 (216-348)||(34259726-34259868)
chr6 (79-245)||(21527203-21527373)
chr6 (59-230)||(9095662-9095838)
chr6 (158-345)||(23410580-23410775)
chr6 (59-115)||(4665899-4665955)
chr6 (71-133)||(7972627-7972689)
chr6 (59-133)||(8049200-8049275)
chr6 (59-134)||(23410504-23410579)
chr6 (146-243)||(8460944-8461042)
chr6 (59-125)||(34889082-34889148)
chr6 (154-245)||(7972537-7972629)
chr6 (53-97)||(9353135-9353179)
chr6 (146-231)||(4184766-4184852)
chr6 (146-204)||(4665970-4666028)
chr6 (59-115)||(4122802-4122858)
chr6 (59-134)||(2437829-2437904)
chr6 (153-200)||(9353187-9353234)
chr6 (59-97)||(7833535-7833573)
chr6 (59-104)||(4184710-4184755)
[»] chr5 (41 HSPs)
chr5 (1-450)||(249218-249668)
chr5 (28-449)||(43346370-43346769)
chr5 (158-445)||(8544436-8544726)
chr5 (59-420)||(17201247-17201600)
chr5 (71-375)||(32474209-32474514)
chr5 (146-440)||(42673782-42674080)
chr5 (259-439)||(39585565-39585746)
chr5 (158-421)||(18413092-18413357)
chr5 (1-111)||(11825447-11825555)
chr5 (1-248)||(37269435-37269687)
chr5 (59-115)||(1590170-1590226)
chr5 (292-415)||(12436464-12436588)
chr5 (217-415)||(36437077-36437280)
chr5 (158-282)||(39614935-39615064)
chr5 (59-133)||(14654948-14655022)
chr5 (60-134)||(20201658-20201732)
chr5 (61-129)||(1583481-1583549)
chr5 (59-115)||(39614853-39614909)
chr5 (59-133)||(12436727-12436799)
chr5 (306-420)||(17201653-17201766)
chr5 (149-240)||(16365821-16365908)
chr5 (146-245)||(19931920-19932018)
chr5 (269-440)||(28620262-28620434)
chr5 (146-245)||(19922221-19922320)
chr5 (64-115)||(32717992-32718043)
chr5 (59-133)||(19924908-19924981)
chr5 (59-133)||(19931857-19931930)
chr5 (64-133)||(19922163-19922231)
chr5 (315-415)||(17200330-17200429)
chr5 (146-245)||(19924971-19925070)
chr5 (146-240)||(32717890-32717981)
chr5 (59-126)||(11992217-11992284)
chr5 (59-125)||(17202828-17202894)
chr5 (61-115)||(36194032-36194086)
chr5 (146-245)||(1583544-1583640)
chr5 (59-112)||(8544745-8544798)
chr5 (61-106)||(13220055-13220100)
chr5 (154-199)||(20201755-20201800)
chr5 (169-214)||(37345844-37345889)
chr5 (59-115)||(17591667-17591722)
chr5 (59-115)||(36246295-36246351)
[»] chr3 (50 HSPs)
chr3 (154-451)||(38750783-38751082)
chr3 (212-450)||(21934224-21934463)
chr3 (67-424)||(9588772-9589138)
chr3 (204-370)||(21915591-21915761)
chr3 (28-133)||(21934475-21934580)
chr3 (158-423)||(2599156-2599420)
chr3 (158-450)||(37030664-37030962)
chr3 (59-415)||(296453-296818)
chr3 (1-129)||(44940863-44940993)
chr3 (261-450)||(16237295-16237482)
chr3 (259-443)||(34668881-34669066)
chr3 (158-375)||(20841413-20841633)
chr3 (28-114)||(38751097-38751183)
chr3 (217-415)||(45759654-45759857)
chr3 (149-375)||(15638251-15638485)
chr3 (158-345)||(375844-376035)
chr3 (158-245)||(3751562-3751650)
chr3 (59-212)||(7259623-7259771)
chr3 (161-345)||(6749087-6749276)
chr3 (59-190)||(25841866-25842000)
chr3 (149-348)||(5493644-5493845)
chr3 (158-345)||(6472527-6472719)
chr3 (149-245)||(6512463-6512560)
chr3 (59-123)||(633286-633350)
chr3 (56-115)||(54675192-54675250)
chr3 (59-113)||(45759965-45760019)
chr3 (259-438)||(19229498-19229686)
chr3 (65-134)||(20841344-20841412)
chr3 (146-245)||(21959606-21959706)
chr3 (59-115)||(45646619-45646675)
chr3 (59-114)||(25342389-25342444)
chr3 (59-113)||(5493572-5493626)
chr3 (58-115)||(19187675-19187732)
chr3 (59-95)||(375765-375801)
chr3 (59-103)||(1272445-1272489)
chr3 (59-126)||(2093795-2093862)
chr3 (59-134)||(20141002-20141076)
chr3 (59-114)||(23272073-23272128)
chr3 (59-109)||(19234007-19234057)
chr3 (59-126)||(23772242-23772311)
chr3 (59-97)||(27264132-27264170)
chr3 (77-134)||(3751496-3751553)
chr3 (149-245)||(23701844-23701941)
chr3 (59-129)||(23701940-23702012)
chr3 (149-245)||(23720299-23720396)
chr3 (149-245)||(23738755-23738852)
chr3 (66-134)||(27817442-27817511)
chr3 (169-244)||(29556422-29556498)
chr3 (71-115)||(34668713-34668757)
chr3 (59-134)||(45667475-45667551)
[»] chr1 (41 HSPs)
chr1 (196-450)||(40518909-40519164)
chr1 (1-344)||(23699203-23699556)
chr1 (212-450)||(30280167-30280407)
chr1 (154-450)||(13254454-13254754)
chr1 (1-125)||(32768955-32769081)
chr1 (146-345)||(1674566-1674766)
chr1 (28-134)||(40519192-40519298)
chr1 (1-126)||(52414900-52415027)
chr1 (158-415)||(4395776-4396046)
chr1 (7-129)||(4671384-4671508)
chr1 (9-134)||(30280005-30280131)
chr1 (332-450)||(19269961-19270079)
chr1 (259-424)||(11237801-11237968)
chr1 (255-415)||(6295478-6295639)
chr1 (259-440)||(36319675-36319855)
chr1 (59-133)||(10430516-10430590)
chr1 (150-227)||(52415029-52415107)
chr1 (146-280)||(19269821-19269959)
chr1 (59-134)||(11238238-11238313)
chr1 (59-133)||(13254752-13254827)
chr1 (56-134)||(3901039-3901115)
chr1 (56-134)||(50488755-50488831)
chr1 (146-245)||(31623002-31623102)
chr1 (59-126)||(1674770-1674837)
chr1 (59-126)||(36319970-36320037)
chr1 (60-113)||(6295761-6295814)
chr1 (158-282)||(39386790-39386915)
chr1 (59-115)||(2655733-2655789)
chr1 (59-126)||(10101672-10101738)
chr1 (59-114)||(43021153-43021208)
chr1 (318-415)||(52957490-52957587)
chr1 (148-199)||(788209-788260)
chr1 (162-244)||(1394745-1394828)
chr1 (146-185)||(2655801-2655840)
chr1 (154-197)||(6295699-6295742)
chr1 (154-185)||(32769089-32769120)
chr1 (71-133)||(788279-788341)
chr1 (180-244)||(35274966-35275032)
chr1 (150-212)||(37710398-37710460)
chr1 (72-133)||(32186544-32186605)
chr1 (77-125)||(39157132-39157180)
[»] chr7 (42 HSPs)
chr7 (180-426)||(39427507-39427754)
chr7 (254-440)||(29664480-29664666)
chr7 (158-440)||(4567410-4567696)
chr7 (9-125)||(39427368-39427487)
chr7 (59-248)||(15643354-15643548)
chr7 (259-420)||(37124374-37124534)
chr7 (147-353)||(35792901-35793110)
chr7 (59-134)||(2798624-2798699)
chr7 (146-415)||(12394235-12394500)
chr7 (260-415)||(10534760-10534918)
chr7 (260-449)||(16196987-16197172)
chr7 (146-245)||(4962833-4962933)
chr7 (154-250)||(14771308-14771405)
chr7 (154-250)||(15221760-15221857)
chr7 (59-134)||(2273505-2273580)
chr7 (59-123)||(10026218-10026284)
chr7 (59-134)||(39430594-39430669)
chr7 (59-134)||(39599685-39599758)
chr7 (63-115)||(28226571-28226623)
chr7 (50-134)||(36412830-36412911)
chr7 (146-205)||(8614774-8614833)
chr7 (59-133)||(7809189-7809263)
chr7 (61-134)||(24394218-24394291)
chr7 (59-115)||(4962948-4963004)
chr7 (59-115)||(37124193-37124249)
chr7 (158-345)||(3835447-3835635)
chr7 (181-243)||(6654441-6654504)
chr7 (59-134)||(27723309-27723384)
chr7 (146-240)||(46671919-46672014)
chr7 (71-133)||(4678434-4678496)
chr7 (59-129)||(8614828-8614897)
chr7 (61-134)||(4567337-4567409)
chr7 (214-282)||(17269666-17269739)
chr7 (63-131)||(10535004-10535072)
chr7 (59-134)||(16196804-16196880)
chr7 (66-122)||(39432618-39432674)
chr7 (59-115)||(43368804-43368860)
chr7 (146-185)||(24394164-24394203)
chr7 (77-134)||(27229615-27229673)
chr7 (59-125)||(35793112-35793178)
chr7 (146-199)||(25290710-25290763)
chr7 (59-115)||(25290639-25290695)
[»] chr4 (43 HSPs)
chr4 (158-450)||(49263089-49263386)
chr4 (158-440)||(24073840-24074125)
chr4 (16-114)||(33889577-33889677)
chr4 (28-185)||(41502528-41502681)
chr4 (158-415)||(54982482-54982742)
chr4 (28-129)||(668025-668126)
chr4 (263-443)||(50721108-50721283)
chr4 (59-129)||(2492864-2492934)
chr4 (260-450)||(9089315-9089497)
chr4 (59-245)||(37371283-37371472)
chr4 (169-324)||(38044711-38044869)
chr4 (59-126)||(9089615-9089682)
chr4 (59-197)||(46195767-46195905)
chr4 (59-134)||(50720920-50720997)
chr4 (59-245)||(19443452-19443637)
chr4 (313-405)||(38044572-38044664)
chr4 (59-115)||(38840428-38840484)
chr4 (159-245)||(30913646-30913733)
chr4 (60-197)||(1821520-1821655)
chr4 (59-124)||(25493846-25493911)
chr4 (146-324)||(37209802-37209981)
chr4 (59-115)||(38434247-38434303)
chr4 (146-243)||(38840320-38840415)
chr4 (59-115)||(45635464-45635520)
chr4 (144-243)||(53370277-53370377)
chr4 (59-97)||(6949112-6949150)
chr4 (59-125)||(25490483-25490549)
chr4 (153-245)||(30912713-30912806)
chr4 (59-114)||(23529535-23529591)
chr4 (59-245)||(24538186-24538372)
chr4 (66-126)||(37209985-37210045)
chr4 (59-134)||(20782489-20782564)
chr4 (155-245)||(29961429-29961520)
chr4 (146-185)||(45635413-45635452)
chr4 (154-200)||(2492938-2492984)
chr4 (259-332)||(6949330-6949404)
chr4 (61-115)||(21956490-21956544)
chr4 (59-93)||(49263017-49263051)
chr4 (59-107)||(24074131-24074179)
chr4 (148-200)||(25493922-25493974)
chr4 (149-185)||(33889689-33889725)
chr4 (66-126)||(53370422-53370482)
chr4 (59-115)||(54982766-54982822)
[»] chr2 (49 HSPs)
chr2 (284-450)||(16806326-16806492)
chr2 (284-450)||(16845607-16845773)
chr2 (146-415)||(15507540-15507819)
chr2 (259-415)||(38589039-38589197)
chr2 (217-443)||(21252735-21252960)
chr2 (60-415)||(41541066-41541412)
chr2 (63-345)||(11083927-11084214)
chr2 (158-450)||(45273107-45273405)
chr2 (63-373)||(7486078-7486381)
chr2 (59-332)||(157885-158160)
chr2 (179-415)||(33024376-33024620)
chr2 (259-415)||(25714088-25714245)
chr2 (59-210)||(27746488-27746642)
chr2 (161-296)||(44898214-44898355)
chr2 (255-415)||(20171162-20171324)
chr2 (59-133)||(36244031-36244105)
chr2 (59-199)||(25965803-25965942)
chr2 (72-245)||(4959261-4959437)
chr2 (159-415)||(33659802-33660065)
chr2 (59-248)||(4316718-4316901)
chr2 (59-134)||(20171432-20171508)
chr2 (59-115)||(44898131-44898187)
chr2 (59-130)||(33659723-33659794)
chr2 (59-124)||(21252601-21252666)
chr2 (62-129)||(1770178-1770245)
chr2 (59-133)||(4700956-4701030)
chr2 (59-115)||(15507471-15507526)
chr2 (221-343)||(36243821-36243951)
chr2 (158-283)||(42872122-42872252)
chr2 (146-209)||(34424692-34424755)
chr2 (59-134)||(37814536-37814611)
chr2 (59-133)||(150272-150346)
chr2 (61-111)||(29882183-29882233)
chr2 (59-128)||(13386444-13386512)
chr2 (59-112)||(42756811-42756864)
chr2 (59-111)||(33659578-33659630)
chr2 (71-175)||(43042923-43043026)
chr2 (59-126)||(12411669-12411736)
chr2 (59-126)||(12423729-12423796)
chr2 (59-126)||(45273417-45273484)
chr2 (150-200)||(11073880-11073930)
chr2 (63-133)||(408481-408553)
chr2 (80-133)||(16806546-16806598)
chr2 (80-133)||(16845827-16845879)
chr2 (59-108)||(42872273-42872321)
chr2 (71-115)||(3309851-3309895)
chr2 (146-198)||(12411761-12411813)
chr2 (146-198)||(12423821-12423873)
chr2 (146-182)||(42756901-42756937)
[»] scaffold0242 (4 HSPs)
scaffold0242 (154-298)||(14896-15043)
scaffold0242 (154-298)||(23731-23878)
scaffold0242 (50-109)||(14813-14872)
scaffold0242 (50-109)||(23648-23707)
[»] scaffold0005 (3 HSPs)
scaffold0005 (261-450)||(256945-257139)
scaffold0005 (63-125)||(256769-256831)
scaffold0005 (59-134)||(272368-272443)
[»] scaffold0841 (1 HSPs)
scaffold0841 (259-415)||(4412-4569)
[»] scaffold1130 (1 HSPs)
scaffold1130 (146-245)||(467-567)
[»] scaffold0188 (1 HSPs)
scaffold0188 (153-243)||(6315-6406)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-245)||(46482-46582)
[»] scaffold1986 (1 HSPs)
scaffold1986 (259-332)||(355-430)


Alignment Details
Target: chr8 (Bit Score: 402; Significance: 0; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 7 - 504
Target Start/End: Original strand, 3741602 - 3742102
Alignment:
Q  7 tacgatttgtcaattatac--tctgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttg 104  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3741602 tacgatttgtcaattataccatttgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatatatttg 3741701  T
Q  105 aaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatata 204  Q
     |||||||||||||||||||||||||||||        |||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  3741702 gaaaactaaagcttatttttttaaacaaagtttattttatgtttaaaacaaaatttgtttcttgttatcttcatatttaaagaaaattttgttacatata 3741801  T
Q  205 ataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataa 303  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3741802 ataatgattttatgaagagttaaaattctataaataagatgaataattgctaaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataa 3741901  T
Q  304 aaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaag 403  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | |||||||||    
T  3741902 aaactccatgaatgttcaaaaggaagaaagagtggaagactcgttagaattgttgatggaaaatgaagagggggaagtagttgaagactcatttgacaag 3742001  T
Q  404 atacaagaacaaaaacaagatgataatgaagaagaagaagtttcatcgtgagtaccaatggattttgatttaaatgaagatgcagattatgaaggaaaaa 503  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3742002 atacaagaacaaaaacaagatgataatgaagaagaagaagtttcaccgtgagtaccaatggattttgatttaaatgaagatgcagattatgaagaaaaaa 3742101  T
Q  504 a 504  Q
    |    
T  3742102 a 3742102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 450
Target Start/End: Complemental strand, 29315988 - 29315563
Alignment:
Q  7 tacgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttg 104  Q
    |||||||| |||||||||| ||  |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  29315988 tacgatttttcaattataccctttgtcaattactcgtatctttctctttgtttgattactcttatcttttttaataaaactaagtaatgctatatatttg 29315889  T
Q  105 aaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatata 204  Q
     |||||||||| || |||||                      |||||| ||||||||||||||||||||| || ||||||| |||||| |||||||||||    
T  29315888 gaaaactaaagttttttttt----------------------ttaaaacaaaatttgtttcttgttatctacagatttaaacaaaattttgttacatata 29315811  T
Q  205 ataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaata 302  Q
    ||||| |||| ||||||||||||||||| |||||||||| ||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  29315810 ataatcattttatgaagagttaaaattctataaataagacgaataattgttaaaaatttcaagtgtaaagtaaaagaacaatttgagagaaaaacaaata 29315711  T
Q  303 aaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaa 402  Q
    |||||||||||||| ||||||| || ||| |||||||||| |  || ||| |  ||||||||| ||||||||| ||||||||||||||  ||||||||||    
T  29315710 aaaactccatgaatattcaaaaagaagaaggagtggaagattaattggaactattgatggaaggtgaagagggagaagtagttgaagattcgtttgacaa 29315611  T
Q  403 gatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
     |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  29315610 tatacaaaaacaaaaataagatgacaatgaagaagaagaagtttcatc 29315563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 180 - 450
Target Start/End: Original strand, 36682665 - 36682936
Alignment:
Q  180 tttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaa 277  Q
    |||||| |||||| ||||||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||| ||||  |||||||| |||||||||     
T  36682665 tttaaacaaaattttgttacatata-taatgattttatgaagagttaaaattttataaataagatgaataattgttaaaaatttcaagtacaaagtaaat 36682763  T
Q  278 gaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagaggggg 377  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||||| || ||| |||| ||||||| |||||| || |    
T  36682764 gaacaatttgagagaaaaataaataaaaactccatgaatgttcaaaaggaaaaaatagtggaagactcattggaactgctaatggaaggtgaagaaggag 36682863  T
Q  378 aagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||| |||||  |||||||||| ||||||||| ||||||||| ||| ||||||||| |||||||||||||    
T  36682864 aagtagtcgaagattcgtttgacaatatacaagaaaaaaaacaaggtgaaaatgaagaataagaagtttcatc 36682936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 59 - 440
Target Start/End: Original strand, 34146204 - 34146589
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa-caaagnnnnnnnnatgtttaaaataaaa 157  Q
    ||||||||||||||||| ||||||||||||||||| | |  ||||| |||||||||| || |||||||||| |||||         | ||||||| |||     
T  34146204 attactcttatctttttcaataaaactaattaatgatgtctatttggaaaactaaagtttgtttttttaaaacaaagttttttttttttttaaaacaaag 34146303  T
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgc 253  Q
    | |||||||||||||||||| ||||||| ||  || | |||||   || |||||||  | ||||| ||||||||| ||||||||||||| |||   |||     
T  34146304 tctgtttcttgttatcttcaaatttaaacaatgttttattaca---aacaatgattccaagaagatttaaaattctataaataagatgagtaacaattgt 34146400  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||  |||||| | ||||||||||||| | |||| | |||| || || ||||| |||||||||||||||||||||| |||| |||||||||| | ||||    
T  34146401 taaaaatttcaaattcaaagtaaaagaaaagatttaaaagaagaa-aattaaaagactccatgaatgttcaaaaggaagaaatagtggaagacccattag 34146499  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    || ||||||||  || ||||| ||| ||| ||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||    
T  34146500 aactgctgatgagaggtgaagggggagaaatagttgaagactcatttgacaagatacaagaacaaaaacaagatgacaatgaagaagaag 34146589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 158 - 415
Target Start/End: Original strand, 34038989 - 34039251
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaataattgct-a 255  Q
    |||||||||||||||||| | |||||||||||||| |||||| |||||||||||||  ||||| ||||||||||| |||||||||| || || ||| | |    
T  34038989 tttgtttcttgttatcttaaaatttaaataaaattttgttacctataataatgattccatgaatagttaaaattctataaataagacgagtagttgttaa 34039088  T
Q  256 aattttcaagtgcaaagtaaaagaaca-atttgaga-gaaaaacaaataa-aaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
    || ||||||||||||| |||||||||| || ||| | |||||  |||||| | |||||||||||||||||||| | |||| ||| |||||||| || |||    
T  34039089 aaatttcaagtgcaaaataaaagaacagatctgataggaaaattaaataatagactccatgaatgttcaaaagaaagaaaaagtagaagactcattggaa 34039188  T
Q  353 ttgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
      |||||||| || |||||| || ||| || ||||||||  ||||||||||||| ||||||||    
T  34039189 cggctgatgggaggtgaagatggagaaatacttgaagacttgtttgacaagatagaagaacaa 34039251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 36682570 - 36682653
Alignment:
Q  50 ctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  36682570 ctttgtttgattactcttatcttttttaataaaactaattaatg-tatatatttgaaaaactaaagtttatttttttaaacaaag 36682653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 59 - 345
Target Start/End: Complemental strand, 1358974 - 1358679
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa-caaagnnnnnnnnatgt-ttaaaataaa 156  Q
    |||||||| |||||||| | |||||||||||||||      |||||||||||||||| ||||||||||||| |||||         | | || ||| |||    
T  1358974 attactctaatctttttcattaaaactaattaatg------atttgaaaaactaaagtttatttttttaaaacaaagtttgtttgttttctttaaacaaa 1358881  T
Q  157 atttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatga---ataattg 252  Q
     |||||||||||||||||| | ||||||| |||||| |||||| |||||||||| ||  ||||| ||||||||||| || ||||||||||    ||||||    
T  1358880 gtttgtttcttgttatcttaaaatttaaacaaaattttgttacctataataatggttccatgaatagttaaaattctatgaataagatgagtggtaattg 1358781  T
Q  253 ct-aaattttcaagtgcaaagtaaaagaac-aatttgagagaaaaa-caaataaaa-actccatg-----aatgttcaaaaggaggaaagagtggaagac 343  Q
     | |||  |||||||||||||||||||||| ||| |||||||||||  |||||||| ||||||||     |||||||||||||| ||||||| |||||||    
T  1358780 ttaaaaaattcaagtgcaaagtaaaagaacaaatctgagagaaaaataaaataaaagactccatgaatataatgttcaaaaggaagaaagagcggaagac 1358681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 217 - 415
Target Start/End: Original strand, 5870931 - 5871130
Alignment:
Q  217 gaagagttaaaattcaataaataagatgaataa---ttgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actcc 310  Q
    ||||||||||||||| ||||||||||||| |||   ||| ||||  ||||||||||||||||||| |||| |||| |||||| || |||||||| |||||    
T  5870931 gaagagttaaaattctataaataagatgagtaacaattgttaaaaatttcaagtgcaaagtaaaaaaacagatttaagagaagaa-aaataaaagactcc 5871029  T
Q  311 atgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaag 410  Q
    ||||||||||||||||| |||| | |||||||||| ||  ||   ||||||  || |||||| || ||| ||||| ||||| | ||||||||||||||||    
T  5871030 atgaatgttcaaaaggaagaaataatggaagactcattgaaa---ctgatgagaggtgaaga-ggagaaatagttaaagactcatttgacaagatacaag 5871125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 245
Target Start/End: Complemental strand, 3443788 - 3443603
Alignment:
Q  64 tcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnat---gtttaaaataaaattt 160  Q
    |||||| ||||| ||| |||||||||||||||||| |||||||||||||||| || |||||||||||||||         |    ||||||| |||||||    
T  3443788 tcttatttttttcaatcaaactaattaatgctatatatttgaaaaactaaagtttgtttttttaaacaaagtttgtttgttttgttttaaaacaaaattt 3443689  T
Q  161 gtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||||||||||||||| |||||||  ||||| |||||  ||| ||||| | |  ||||| ||||||||||| |||||||| ||||    
T  3443688 gtttcttgttatcttcaaatttaaaccaaattttgttatctatgataatagttccatgaaaagttaaaattctataaataatatga 3443603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 14896813 - 14896901
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||| |||||||||||  ||||||||| |||||||||||||||||    
T  14896813 tttcaagtgcaaagtgaaagaacagatctgagagaaaaataaataaaagactccatgaattatcaaaaggaagaaagagtggaagactc 14896901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 16599441 - 16599365
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctta-tttttttaaacaaag 134  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||| |||||||||||||||    
T  16599441 attactcttatctttttcaataaaactaattaatgatatatatttgtaaaactaaagtttattttttttaaacaaag 16599365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 450
Target Start/End: Original strand, 32233942 - 32234011
Alignment:
Q  381 tagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||| ||| | ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  32233942 tagttgatgactcatttgacaagatacaagaacaagaacaagatgacaatgaagaaaaagaagtttcatc 32234011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 163 - 352
Target Start/End: Original strand, 38457401 - 38457592
Alignment:
Q  163 ttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgctaaat 258  Q
    |||||||||| |||| ||||||| |||||| |||||||   || |||| ||  | ||||||||||||||  |||||||||||||| ||   ||| ||||     
T  38457401 ttcttgttattttcaaatttaaacaaaattttgttaca---aacaatggttccaagaagagttaaaattttataaataagatgaacaacagttgttaaaa 38457497  T
Q  259 -tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
     |||||||||||||||||||||| | ||||||||||||||  ||||||| ||| |||||||||||||||||| |||| |||| | ||||| ||||||    
T  38457498 atttcaagtgcaaagtaaaagaatagatttgagagaaaaa--aataaaagacttcatgaatgttcaaaaggaagaaaaagtgaacgactcattagaa 38457592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 2742994 - 2742926
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||| ||||| |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||    
T  2742994 ttatatttttcaataaaactaattaatgctatatatttgaaaaattaaagtttgtttttttaaacaaag 2742926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 267 - 390
Target Start/End: Complemental strand, 1256568 - 1256445
Alignment:
Q  267 gcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaa 364  Q
    ||||||||||||||||| |||||||||||||  ||||||| |||||||||||| ||||||||| |||| ||||||||| || || |||  | |||||  |    
T  1256568 gcaaagtaaaagaacaaatttgagagaaaaa--aataaaagactccatgaatgctcaaaaggaagaaaaagtggaagattcattggaacggttgatgaga 1256471  T
Q  365 gatgaagagggggaagtagttgaaga 390  Q
    | ||||||||| ||| ||||||||||    
T  1256470 ggtgaagagggagaaatagttgaaga 1256445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 352
Target Start/End: Complemental strand, 30887853 - 30887647
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaat 247  Q
    |||||||| ||||||| |||||||||| | ||||||| |||||| | || ||   || |||| || || ||||||||||||||| |||||||||||||||    
T  30887853 aaaataaagtttgttttttgttatctttaaatttaaacaaaattttatttca---aacaatggttctaagaagagttaaaattctataaataagatgaat 30887757  T
Q  248 a---attgct-aaattttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaag 341  Q
    |   |||| | ||| ||| ||| ||| ||||| ||||||| |||||| ||| || |||||||| |||||||||||||||||||| | || | ||||||||    
T  30887756 atcaattgttcaaaatttaaagggcagagtaatagaacaaatttgagggaagaa-aaataaaagactccatgaatgttcaaaagaaagagaaagtggaag 30887658  T
Q  342 actcgttagaa 352  Q
    |||| ||||||    
T  30887657 actcattagaa 30887647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 16599340 - 16599240
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| ||| ||||||||  |||||||||| |||||||||||||| |||||| ||| |||||||||  ||||| ||||||||||  ||| ||||||||    
T  16599340 tttaaaaaaaagtttgtttcgagttatcttcaaatttaaataaaattttgttacctatcataatgattccatgaaaagttaaaattttatacataagatg 16599241  T
Q  245 a 245  Q
    |    
T  16599240 a 16599240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 25496670 - 25496726
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  25496670 attacttttatctttttcaataaaactaattaatgctatctatttgaaaaactaaag 25496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 14896650 - 14896717
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||||||||| ||||||||||||||||| |||| |||| ||||||| ||| || |||||||    
T  14896650 attactcttatctttttcaataaaactaattaatgttatatatttaaaaaacttaagtttgttttttt 14896717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 40557229 - 40557287
Alignment:
Q  56 ttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||||    
T  40557229 ttgattactcttatctttttcaataaa-ctaattaatgttataaatttgaaaaactaaag 40557287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 41411530 - 41411454
Alignment:
Q  56 ttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||||||||||||||||| || |||||||||||| | |||| |||||||||||||||| || |||||| ||||||||    
T  41411530 ttgattactcttatctttttcaa-aaaactaattaaagttataaatttgaaaaactaaag-tttttttttaaaacaaag 41411454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 7578271 - 7578144
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctt-atttttttaaacaaagnnnnnnnnat---gtttaaaata 154  Q
    |||| |||||| ||||| |||||||||||||||||||||| |||| ||||| ||||| ||  |||||||||||||||         |    |||||||||    
T  7578271 attattcttatatttttcaataaaactaattaatgctatatatttaaaaaattaaagtttgttttttttaaacaaagtttgtttgttttgttttaaaata 7578172  T
Q  155 aaatttgtttcttgttatcttcatattt 182  Q
    ||||||||||||||||||||||| ||||    
T  7578171 aaatttgtttcttgttatcttcaaattt 7578144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 325
Target Start/End: Complemental strand, 7695358 - 7695086
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt---aaacaaagnnnnnnnnatgtttaaaataa 155  Q
    ||||||||||||||||| |||||||||| |||||| |||  |||||||||||||||  || |||||||   ||||||||         | |||  |||||    
T  7695358 attactcttatctttttcaataaaactagttaatgttatctatttgaaaaactaaaaattgtttttttttaaaacaaagtttgtttg-tttttttaataa 7695260  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaataa----t 250  Q
     ||||| ||||||||||||||| ||||||| |||||| |||||||   || |||| ||  |  |||||||||||||| ||||||||||||| |||    |    
T  7695259 catttgcttcttgttatcttcaaatttaaacaaaattttgttaca---aacaatggttccaaaaagagttaaaattctataaataagatgagtaacaatt 7695163  T
Q  251 tgctaaattttcaagtgcaaagt-aaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaag 325  Q
    |   ||| ||||||||| ||| | ||||||| | ||||||||||| || |||||||| ||||||||||||||||||||    
T  7695162 tttaaaaatttcaagtgtaaaataaaaagaatagatttgagagaagaa-aaataaaagactccatgaatgttcaaaag 7695086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 9455255 - 9455311
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| |||||| ||||| |||||||||||||||||||||| |||||||||| |||||    
T  9455255 attattcttatatttttcaataaaactaattaatgctatatatttgaaaaaataaag 9455311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 38401587 - 38401663
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctta-tttttttaaacaaag 134  Q
    ||||||||||||||||||||||||| ||||||||| |||  ||||  |||| ||||| ||| |||||||||||||||    
T  38401587 attactcttatcttttttaataaaattaattaatgttatttatttcgaaaattaaagtttattttttttaaacaaag 38401663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 1530658 - 1530584
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||| ||||| ||||||||| |||||||||||  ||||||||| |||||| || ||||||||| |||||    
T  1530658 attactcttatttttttcaataaaactgattaatgctatctatttgaaaacctaaag-ttttttttttaatcaaag 1530584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 4418603 - 4418646
Alignment:
Q  72 tttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  4418603 tttttaataaaactaattaatgctatatatttggaaaactaaag 4418646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 38457299 - 38457358
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    |||||||||| |||||||||||||||||||||  ||||| |||||||||| || ||||||    
T  38457299 ttatctttttcaataaaactaattaatgctatctatttggaaaactaaagtttgtttttt 38457358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 39628353 - 39628286
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||| ||||| ||||||||||||||||| |||  ||||| |||||||||| || |||||||    
T  39628353 attactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgttttttt 39628286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 39637903 - 39637836
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||| ||||| ||||||||||||||||| |||  ||||| |||||||||| || |||||||    
T  39637903 attactcttatttttttcaataaaactaattaatgttatctatttggaaaactaaagtttgttttttt 39637836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 16393725 - 16393802
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctt--atttttttaaacaaag 134  Q
    |||||| ||| |||||| |||||||||||||||||||||  ||||| |||||||||| ||   |||||||||||||||    
T  16393725 attacttttagctttttcaataaaactaattaatgctatctatttggaaaactaaagtttggttttttttaaacaaag 16393802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 30887929 - 30887895
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatg 93  Q
    |||||||||||||||||||||||||||||||||||    
T  30887929 attactcttatcttttttaataaaactaattaatg 30887895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 45083097 - 45083023
Alignment:
Q  52 ttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||||| ||||||||||||||||| |||||||||||||||||  ||  ||||| |||||||| | || |||||||    
T  45083097 ttgtttaattactcttatctttttcaataaaactaattaatgtaatgtatttggaaaactaacgtttgttttttt 45083023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 500 - 533
Target Start/End: Original strand, 3742114 - 3742147
Alignment:
Q  500 aaaaagatagtaaataacaaatgtttgttcatgt 533  Q
    ||||||||||||||||||||||||||||||||||    
T  3742114 aaaaagatagtaaataacaaatgtttgttcatgt 3742147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 32233649 - 32233726
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgc-tatacatttgaaaaactaaag-cttatttttttaaacaaag 134  Q
    ||||||||||||||||| |||||||||||||||||| |||  ||||| || |||||||  || |||||||||||||||    
T  32233649 attactcttatctttttcaataaaactaattaatgcttatctatttggaacactaaagttttttttttttaaacaaag 32233726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 43026639 - 43026562
Alignment:
Q  166 ttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataaga 242  Q
    ||||||| ||||  |||||| |||||| |||||| ||||| |||| ||| ||||||||||||||||| ||||||||||    
T  43026639 ttgttatgttcaagtttaaacaaaattttgttacttataagaatggtttcatgaagagttaaaattctataaataaga 43026562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 5870776 - 5870832
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| ||||||| |||| ||||||||||||||||| |||  ||||||||||||||||    
T  5870776 attattcttatcattttcaataaaactaattaatgttatctatttgaaaaactaaag 5870832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 25400491 - 25400547
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| ||||| |||| |||||||||||||||||||||  ||||| ||||||||||    
T  25400491 attacttttatccttttcaataaaactaattaatgctatctatttggaaaactaaag 25400547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 27231794 - 27231850
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| |||||| ||||| |||||||||||||||||||||  ||||| ||||||||||    
T  27231794 attattcttatttttttcaataaaactaattaatgctatctatttggaaaactaaag 27231850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34146170 - 34146221
Alignment:
Q  1 taaggatacgatttgtcaattatactc--tgtcagttactcgtatctttttc 50  Q
    ||||| |||||||||||||||||||||  ||||| |||||| ||||||||||    
T  34146170 taagggtacgatttgtcaattatactctttgtcaattactcttatctttttc 34146221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 7 - 504
Target Start/End: Complemental strand, 26252714 - 26252222
Alignment:
Q  7 tacgatttgtcaattatac--tctgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttg 104  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  26252714 tacgatttgtcaattataccatttgtcaattactcgtatctttttctttgtttggttactcttatcttttttaataaaactaattaatgctatatatttg 26252615  T
Q  105 aaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatata 204  Q
     |||| ||||| || |||||||||||||||        |||||||||| ||  ||| ||| || ||||||||||||||||| |||||| |||||||||||    
T  26252614 gaaaaataaagtttgtttttttaaacaaagtttatattatgtttaaaacaatttttttttattattatcttcatatttaaacaaaattttgttacatata 26252515  T
Q  205 ataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataa 303  Q
    |||||||||| ||||||||||||||||        |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||| |||||||    
T  26252514 ataatgattttatgaagagttaaaatt--------aagatgaataattgttaaaatttcaagtgcaaagtaaaagaaaaatttgagagaaaatcaaataa 26252423  T
Q  304 aaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaag 403  Q
    |||||| ||||||||||||||||| |||| ||||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||  ||||||||||    
T  26252422 aaactctatgaatgttcaaaaggaagaaaaagtggaagactagttggaattactgatggaagatgaagagggagaagtagttgaagacttgtttgacaag 26252323  T
Q  404 atacaagaacaaaaacaagatgataatgaagaagaagaagtttcatcgtgagtaccaatggattttgatttaaatgaagatgcagattatgaaggaaaaa 503  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  26252322 atacaagaacaaaaataagatgacaatgaagaagaagaagtttcatcaagagtaccaatggattttgatttaaatgaagatgcatattatgaagaaaaaa 26252223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 59 - 415
Target Start/End: Original strand, 25056511 - 25056858
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||| ||   ||| |||||||||         | ||| ||| ||| |    
T  25056511 attactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttt---tttctaaacaaagt--------ttttttaaacaaagt 25056599  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgct 254  Q
    ||||||||||||||||||| ||||||| |||||| |||||||   || |||||||  | ||||||||||||||| ||||||||||||| |||   ||| |    
T  25056600 ttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aacaatgattccaagaagagttaaaattctataaataagatgagtaacaattgtt 25056696  T
Q  255 aaattttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
    ||| |||||||| | || ||||||||||| ||| |||||| || |||||||| |||||||||||||||||| | | |||| ||| |||||||||||  ||    
T  25056697 aaaatttcaagttcgaactaaaagaacaaatttaagagaagaa-aaataaaagactccatgaatgttcaaaggaaagaaaaagttgaagactcgttgaaa 25056795  T
Q  353 ttgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    ||| |||||  || ||||||||  | | ||||||||||| | ||||| |||||||||||||||    
T  25056796 ttgttgatgagaggtgaagaggaagcaatagttgaagactcatttgataagatacaagaacaa 25056858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 306 - 450
Target Start/End: Complemental strand, 2437669 - 2437525
Alignment:
Q  306 actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagat 405  Q
    |||||||||||||||||||||| |||| ||||||||| ||||| ||||| ||||||  || |||||| || ||| ||||||||||| | |||||||||||    
T  2437669 actccatgaatgttcaaaaggaagaaaaagtggaagattcgttggaatttctgatgagaggtgaagaaggagaaatagttgaagactcatttgacaagat 2437570  T
Q  406 acaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    |||||||||  |||| ||||| |||||||||||||||||||||||    
T  2437569 acaagaacaggaacaggatgacaatgaagaagaagaagtttcatc 2437525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 59 - 327
Target Start/End: Complemental strand, 6111192 - 6110915
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag-nnnnnnnnatgtttaaaataaaa 157  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| || |||||||||||||||          | ||| ||| |||     
T  6111192 attactcttatctttttaaataaaactaattaatgttatatatttggaaaactaaagtttgtttttttaaacaaagtttgtttgtttttttgaaacaaag 6111093  T
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataa-tgatttatgaagagttaaaattcaataaataagatg---aataattgc 253  Q
    |||||||||||||||||||| | |||||||||||| |||||| |||||||| || |  ||||||||||||||||  ||||||||||||   | ||||||     
T  6111092 tttgtttcttgttatcttcaaacttaaataaaattttgttacctataataattgttcaatgaagagttaaaattttataaataagatgagtagtaattgt 6110993  T
Q  254 t-aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaat--aaaaactccatgaatgttcaaaagga 327  Q
    | ||| ||| ||||| |||||||||||| | || ||||||||| | ||||  ||||||||||||||| ||||||||||    
T  6110992 taaaaatttaaagtgtaaagtaaaagaatagatatgagagaaacaaaaataaaaaaactccatgaatattcaaaagga 6110915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 59 - 445
Target Start/End: Complemental strand, 14093855 - 14093466
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt-aaacaaagnnnnnnnnatgttta-aaataaa 156  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||  |||||||||| |||||||||| ||||||||         | |||  ||| ||     
T  14093855 attactcttatctttttcaataaaactaattaatgctatcgattttgaaaactaaagtttattttttttaaacaaagtttgcttgttttttttaaacaac 14093756  T
Q  157 atttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa----tt 251  Q
     ||||||||||||||||||| || ||||| |||||| |||||||   || |||| ||  |  |||||||||||||| ||||||||||||| |||    ||    
T  14093755 gtttgtttcttgttatcttc-taattaaacaaaattttgttaca---aacaatggttccaataagagttaaaattctataaataagatgagtaacaattt 14093660  T
Q  252 gctaaattttcaagtgcaaagtaaaagaacaattt-gagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgtta 349  Q
       ||| ||||||| ||||||  ||||||||| || ||| ||| || |||||||| ||| |||||||||| |||| || |||| ||| |||||||| ||     
T  14093659 ttaaaaatttcaagcgcaaagcgaaagaacaaattcgagtgaagaa-aaataaaagacttcatgaatgtttaaaatgaagaaaaagtagaagactcattg 14093561  T
Q  350 gaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtt 445  Q
    ||| || |||||  || ||||||||| ||| |||||||| || | |||| |||||||| ||||||| |||||||||| ||||||||||||||||||    
T  14093560 gaactgatgatgagaggtgaagagggagaaatagttgaa-actcatttgtcaagatacgagaacaagaacaagatgacaatgaagaagaagaagtt 14093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 259 - 415
Target Start/End: Original strand, 9353290 - 9353444
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    ||||||||| ||| |||||||||| ||||||| |||||| |||||||| |||||||||||||||||||||| |||||||| |||||||| ||  ||   |    
T  9353290 tttcaagtgaaaattaaaagaacagatttgag-gaaaaaaaaataaaagactccatgaatgttcaaaaggaagaaagagtagaagactcattgaaa---c 9353385  T
Q  357 tgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    | |||  || ||||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  9353386 tcatgagaggtgaagagggagaaatagttgaagactcatttgacaagatacaagaacaa 9353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 440
Target Start/End: Original strand, 8049379 - 8049561
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    ||||||||| |||||||||| ||| |||||||| || || |||||||| ||||||   ||||||||||||  |||| ||||||||||||||| ||||||     
T  8049379 tttcaagtgtaaagtaaaagtacagatttgagaaaagaa-aaataaaagactccacagatgttcaaaagggagaaaaagtggaagactcgttggaattgt 8049477  T
Q  357 tgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    |||||  || |||||||||   | |||||||| || | ||||||||||||||||||||| || ||||||| |||||| ||||||    
T  8049478 tgatgagaggtgaagagggaacaatagttgaatactcatttgacaagatacaagaacaagaataagatgacaatgaataagaag 8049561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 34259726 - 34259868
Alignment:
Q  216 tgaagagttaaaattcaataaataagatgaataattgct-aaattttcaagtgcaaagtaaaagaaca-attt--------gagagaaaaacaaataaaa 305  Q
    |||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||        |||||| | | ||| ||||    
T  34259726 tgaagagttaaaattctataaataagatgaataattgttaaaaatttcaagtgcaaagtaaaagaacatatttgagagagagagagagagaaaaaaaaaa 34259825  T
Q  306 actccatgaatgttcaaaaggaggaaagagtggaagactcgtt 348  Q
    ||| ||| |||||||||||||| |||||||||||| |||||||    
T  34259826 actgcataaatgttcaaaaggaagaaagagtggaaaactcgtt 34259868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 79 - 245
Target Start/End: Complemental strand, 21527373 - 21527203
Alignment:
Q  79 taaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgt---ttaaaataaaatttgtttcttgttatctt 175  Q
    ||||||||||||||||| || |||||||||||||||| || |||||||||||||||         | |   |||||| ||||||||||||||||||||||    
T  21527373 taaaactaattaatgctttatatttgaaaaactaaagtttgtttttttaaacaaagtttgtttgttttgttttaaaacaaaatttgtttcttgttatctt 21527274  T
Q  176 catatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    || ||||||| |||||| |||||| ||| ||||| | |  ||||||||||||||||| || ||||| ||||    
T  21527273 caaatttaaacaaaattttgttacctatgataatagttccatgaagagttaaaattctatgaataacatga 21527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 230
Target Start/End: Complemental strand, 9095838 - 9095662
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt-aaacaaagnnnnnnnnat--gttt-aaaata 154  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||| |||||||||  || ||||||| ||||||||         |  |||| |||| |    
T  9095838 attattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgttttttttaaacaaagtttgtttgttttgtttcaaaaca 9095739  T
Q  155 aaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaatt 230  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||| ||| ||||| | || ||||||||||||||||    
T  9095738 aaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctatgataatagtttcatgaagagttaaaatt 9095662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 158 - 345
Target Start/End: Original strand, 23410580 - 23410775
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagat---gaataattgc 253  Q
    |||||||||||||||||| | ||||||| |||||| |||||| ||| |||| | || |||||| ||||| ||||  |||||||||||    | ||||||     
T  23410580 tttgtttcttgttatcttaaaatttaaacaaaattttgttacctatgataacggttctatgaatagttacaattttataaataagataagtagtaattgt 23410679  T
Q  254 t-aaattttcaagtgcaaagtaaaagaac-aatttgagagaaaaacaaa--taaaaactccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    | ||| |||||| |||||||||||||||| ||| ||||||||||| |||   |||  || |||||||||||||||||| |||||||| ||||||||    
T  23410680 taaaaatttcaaatgcaaagtaaaagaacaaatgtgagagaaaaataaaatcaaagtctacatgaatgttcaaaaggaagaaagagtcgaagactc 23410775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 4665899 - 4665955
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  4665899 attactcttatatttttaaataaaactaattaatgctatatatttgaaaaactaaag 4665955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 7972689 - 7972627
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    ||||| ||||||||||||||||| |||| |||||||||||||||| || ||||||||||||||    
T  7972689 tttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgtttttttaaacaaa 7972627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 8049200 - 8049275
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttt-ttaaacaaa 133  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||| |||||||||| || ||||| |||||||||    
T  8049200 attactcttatctttttcaataaaactaattaatgatatctatttggaaaactaaagtttgtttttcttaaacaaa 8049275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 23410504 - 23410579
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||| | | |||||| || ||||||| |||||||    
T  23410504 attacttttatcttttttaataaaactaattaatgttatatatttggatagctaaagttttttttttttaacaaag 23410579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 8460944 - 8461042
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagat 243  Q
    ||||||| ||| |||||||||||||||||| | ||||||| |||| | |||||| ||||| |||| ||  ||||| ||||||||||| |||||||||||    
T  8460944 tttaaaacaaagtttgtttcttgttatcttaaaatttaaacaaaactttgttacctataacaatggttccatgaatagttaaaattctataaataagat 8461042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 34889082 - 34889148
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    ||||||||||||||||| |||||||||||||| || |||| |||||||||| ||||| || ||||||    
T  34889082 attactcttatctttttcaataaaactaattattgttatatatttgaaaaattaaagtttgtttttt 34889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 245
Target Start/End: Complemental strand, 7972629 - 7972537
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| | | ||||| | |  ||||||||||||||||| || ||||| ||||    
T  7972629 aaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctgtgataatagttccatgaagagttaaaattctatgaataacatga 7972537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 9353135 - 9353179
Alignment:
Q  53 tgtttgattactcttatcttttttaataaaactaattaatgctat 97  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  9353135 tgtttaattactcttatctttttcaataaaactaattaatgctat 9353179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 4184766 - 4184852
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt---tatgaagagttaaaattc 231  Q
    ||||||| |||||||||||||||||||||| | ||||||| |||||| ||||  |||| |||||| ||   ||||||||||||||||||    
T  4184766 tttaaaacaaaatttgtttcttgttatctttaaatttaaacaaaattttgtt--atatgataatggttccatatgaagagttaaaattc 4184852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 4665970 - 4666028
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatata 204  Q
    ||||||| |||||||||||||||||||||| | ||||||| |||||| |||||| ||||    
T  4665970 tttaaaacaaaatttgtttcttgttatctttaaatttaaacaaaattttgttacctata 4666028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 4122802 - 4122858
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| ||||||| ||||||||| |||  |||||||||| |||||    
T  4122802 attactcttatctttttcaataaaattaattaatgttatctatttgaaaaagtaaag 4122858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 2437904 - 2437829
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||| |||||| ||||| ||||||||||||||||| |||  ||||| |||||||||  || ||||||| |||||||    
T  2437904 attattcttatttttttcaataaaactaattaatgatatctatttggaaaactaaatttttttttttttaacaaag 2437829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 9353187 - 9353234
Alignment:
Q  153 taaaatttgtttcttgttatcttcatatttaaataaaattctgttaca 200  Q
    |||| ||||||| |||||||||||| |||||||||||||| |||||||    
T  9353187 taaagtttgtttgttgttatcttcaaatttaaataaaattttgttaca 9353234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 7833535 - 7833573
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctat 97  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  7833535 attactcttatcttttttaataaaattaattaattctat 7833573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 104
Target Start/End: Original strand, 4184710 - 4184755
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttg 104  Q
    ||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  4184710 attactcttatatttttaaataaaattaattaatgctatatatttg 4184755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 1 - 450
Target Start/End: Complemental strand, 249668 - 249218
Alignment:
Q  1 taaggatacgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctata 98  Q
    |||||||| |||||||||||||||| ||  |||| |||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  249668 taaggatatgatttgtcaattataccctttgtcaattactcataactttttctttgtttggttactcctatcttttttaataaaactaattaatgctata 249569  T
Q  99 catttgaaaaactaaagcttattttttt-aaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgtt 197  Q
     ||||| |||||||||| |||||||||| ||||||||         | ||| ||| ||||||||||||||||||||||   ||||||| |||||| ||||    
T  249568 tatttggaaaactaaagtttattttttttaaacaaagtttatttatttttttaaacaaaatttgtttcttgttatctt---atttaaacaaaattttgtt 249472  T
Q  198 acatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaaaa 295  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  249471 acatataataatgattttatgaagagttaaaattttataaataagatgaataattgttaaaaatttcaagtgcaaagtaaaagaacaatttgagagaaaa 249372  T
Q  296 acaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgt 395  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||| || ||| |||| ||||||| |||| |||| |||||||||||| |  |||    
T  249371 acaaataaaaacttcatgaatgttcaaaaggaagaaagagtggaagactcattggaactgctcatggaaggtgaaaagggagaagtagttgaaaattcgt 249272  T
Q  396 ttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||| ||||||||| ||||| |||||||  ||||||||||| ||||||||||    
T  249271 ttgacaatatacaagaa-aaaaataagatgacgatgaagaagaataagtttcatc 249218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 28 - 449
Target Start/End: Complemental strand, 43346769 - 43346370
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttta 127  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||  |||||||||| || ||||||||    
T  43346769 tgtcaattactcgtatctttctctttgtttggttactcttatcttttttaataaaactaagtaatgctatatatttagaaaactaaag-tttttttttta 43346671  T
Q  128 aacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatga-tttatgaagagttaa 226  Q
    ||                  ||||||     |||||||||||||||| || ||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  43346670 aa------------------taaaat-----ttgtttcttgttatctacaaatttaaacaaaattttgttacatataataatgattttatgaagagttaa 43346594  T
Q  227 aattcaataaataagatgaataattgct-aaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaag 325  Q
    ||||  |||| ||||| ||||||||| | ||| |||||||| ||||||||||    || ||||||||||||||||||||||||||||||||||||||||     
T  43346593 aattatataattaagacgaataattgttaaaaatttcaagtacaaagtaaaaattgaaattgagagaaaaacaaataaaaactccatgaatgttcaaaaa 43346494  T
Q  326 gaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatg 425  Q
    ||  |||||||||||||||| |||||| |||||||||||| ||||||| | ||||||||||||||  |||||||||| |||||| |||||||||||||||    
T  43346493 gaaaaaagagtggaagactcattagaactgctgatggaaggtgaagagagagaagtagttgaagattcgtttgacaatatacaaaaacaaaaacaagatg 43346394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 158 - 445
Target Start/End: Complemental strand, 8544726 - 8544436
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgc 253  Q
    |||||||||||||||||||| ||| ||| |||||| |||||||   || |||| ||| | ||||||||||||||| ||||||||||||| ||   | ||     
T  8544726 tttgtttcttgttatcttcaaattcaaacaaaattttgttaca---aacaatggtttcaagaagagttaaaattctataaataagatgagtagcaactgt 8544630  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||  ||||||||| |||||||||||||| ||||||||||| || |||||||| ||| |||||||||||||||||| ||||||||||||||||||||      
T  8544629 taaaaatttcaagtgtaaagtaaaagaacagatttgagagaagaa-aaataaaatacttcatgaatgttcaaaaggaagaaagagtggaagactcgttga 8544531  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtt 445  Q
    || ||||||||  || ||||||| |  || |||||||||||  ||||||||||||| |||||||| |||||| ||| ||||||||||||||||||    
T  8544530 aactgctgatgagaggtgaagagagataaatagttgaagacttgtttgacaagatagaagaacaagaacaaggtgacaatgaagaagaagaagtt 8544436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 59 - 420
Target Start/End: Original strand, 17201247 - 17201600
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| |||||||||| ||   ||| |||||||||         | ||| ||| ||| |    
T  17201247 attactcttatctttttcaataaaactaattaatgctatctatttggaaaactaaagttt---tttctaaacaaagtt-------ttttttaaacaaagt 17201336  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga---ataattgct 254  Q
    ||||||||||||||||||| ||||||| |||||| |||||||   || |||||||  | ||||||||||||||| |||||||||||||   ||||||| |    
T  17201337 ttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aacaatgattccaagaagagttaaaattctataaataagatgagtaataattgtt 17201433  T
Q  255 aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
    ||| ||| |||| | || |||||||||| |||| |||||| || || ||||| |||||||||||||||||||| | |||| |||||||||||||||  ||    
T  17201434 aaaattttaagttcgaactaaaagaacatatttaagagaagaa-aattaaaagactccatgaatgttcaaaagaaagaaaaagtggaagactcgttgaaa 17201532  T
Q  353 ttgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaaca 420  Q
    |||||||||  || | |||||   | | ||||||||||| | ||||||||||||||||||||| ||||    
T  17201533 ttgctgatgagaggtcaagagatagcaatagttgaagactcatttgacaagatacaagaacaagaaca 17201600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 71 - 375
Target Start/End: Original strand, 32474209 - 32474514
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgtt 170  Q
    ||||| |||||||||||||||||||||  ||||| |||| ||||| || |||||||||||||||         |  |||| | ||| |||||||||||||    
T  32474209 tttttcaataaaactaattaatgctatctatttggaaaattaaagtttgtttttttaaacaaagtttttttctt--ttaagacaaagtttgtttcttgtt 32474306  T
Q  171 atcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaataa---ttgctaaat-tttcaag 265  Q
    ||||||| |||||||||||||| |||||||   || |||| || ||  |||||||||||||| | |||||||||||||||   ||| ||||  |||||||    
T  32474307 atcttcaaatttaaataaaattttgttaca---aacaatggttctaaaaagagttaaaattctaaaaataagatgaataacaattgttaaaagtttcaag 32474403  T
Q  266 tgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaa 364  Q
    |||||||||||| ||||| |||||||||| || ||  ||| |||||||||||||||||||||| |||| |||| |||||||||||||| ||  ||||  |    
T  32474404 tgcaaagtaaaacaacaaatttgagagaagaaaaatcaaagactccatgaatgttcaaaaggaagaaaaagtgaaagactcgttagaactgtggatgaga 32474503  T
Q  365 gatgaagaggg 375  Q
    |||||||||||    
T  32474504 gatgaagaggg 32474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 146 - 440
Target Start/End: Complemental strand, 42674080 - 42673782
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaa-ttcaataaataagatg 244  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||| |||||||   |  |||| |  | |||||||||||| ||| ||||||||||||    
T  42674080 tttaaaacaaagtttgtttcttgttatcttcaaatttaaataaaattttgttaca---agaaatgttccaagaagagttaaaaattctataaataagatg 42673984  T
Q  245 aataa---ttgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtgg 338  Q
    |||||   ||| ||||  |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||||||| |||||||| | |||| |||||    
T  42673983 aataacaattgttaaaaatttcaagtgcaaagtaaaagaacatatttaagagaagaa-aaataaaagactccatgaattttcaaaagaaagaaaaagtgg 42673885  T
Q  339 aag-actcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaag 437  Q
    ||  ||||||   |||||||||||   | |||||| || | ||||||||||||| | | |||||||||||||||| || |||||||||| ||||||||||    
T  42673884 aattactcgtcgaaattgctgatgaggggtgaagatggagcagtagttgaagactcatctgacaagatacaagaataagaacaagatgacaatgaagaag 42673785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 259 - 439
Target Start/End: Complemental strand, 39585746 - 39585565
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    ||||||||||||||||||| |||| ||||||||||| || |||||||| ||||||| |||||||||||||| |||| |||||||||||| ||  || |||    
T  39585746 tttcaagtgcaaagtaaaataacatatttgagagaagaa-aaataaaagactccattaatgttcaaaaggaagaaaaagtggaagactcattgaaactgc 39585648  T
Q  357 tgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaa 439  Q
    ||||| ||| ||||||||| | | |||||||||||   ||||  || |||||||||||| |||||||||| ||||||||||||    
T  39585647 tgatgaaaggtgaagagggagcaatagttgaagacttatttggtaaaatacaagaacaataacaagatgacaatgaagaagaa 39585565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 158 - 421
Target Start/End: Complemental strand, 18413357 - 18413092
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgc 253  Q
    |||||||||||||||||||| ||||||| |||||| |||||||   ||| ||| ||| | ||||||||||||||| ||||||||||||||||   ||||     
T  18413357 tttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aatgatggtttcaagaagagttaaaattctataaataagatgaatagaaattgt 18413261  T
Q  254 taaatt-ttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||   ||||||||||||||||||||||| ||||||||||| || |||||||| | |  |||||||||||||| || |||| ||||||||| | ||| |    
T  18413260 taaaaaattcaagtgcaaagtaaaagaacatatttgagagaagaa-aaataaaagattttatgaatgttcaaaaagaagaaaaagtggaagatt-gttgg 18413163  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaa 421  Q
    ||||||| ||   || ||||||||| | | |||||||||||   ||||||||||||||||| ||| |||||    
T  18413162 aattgctcattagaggtgaagagggagcaatagttgaagacttatttgacaagatacaagagcaagaacaa 18413092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11825555 - 11825447
Alignment:
Q  1 taaggatacgatttgtcaattatactctgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctataca 100  Q
    ||||| |||||||||||||||||  | ||| ||||| || |||||||||||||||||| |||||||||||||||| ||||||||||||||||| | || |    
T  11825555 taagggtacgatttgtcaattat--tttgttagttaatcatatctttttctttgtttggttactcttatctttttcaataaaactaattaatgttgtata 11825458  T
Q  101 tttgaaaaact 111  Q
    |||| ||||||    
T  11825457 tttggaaaact 11825447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 37269435 - 37269687
Alignment:
Q  1 taaggatacgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatctttttt---------aataaaactaatt 89  Q
    |||||||||||||  |||||||||| ||  |||| ||||| ||||||||||||||||||| |||||||||||||||||         |||||||||||||    
T  37269435 taaggatacgattgatcaattataccctttgtcaattactggtatctttttctttgtttggttactcttatcttttttaattaattaaataaaactaatt 37269534  T
Q  90 aatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaataaa 189  Q
    |||| |||| ||||| |||||||||  || ||||||||||||            | || |||| |||||||||||| ||||||||||| ||||||| ||     
T  37269535 aatgatatatatttggaaaactaaaatttgtttttttaaaca-------tttttttttaaaaacaaaatttgtttcctgttatcttcagatttaaacaat 37269627  T
Q  190 attctgttacatataataatga-tttatgaagagttaaaattcaataaataagatgaata 248  Q
     || | |||||| |||| |||| ||||||||||||||||| ||  |||||| ||||||||    
T  37269628 ttttttttacatgtaatcatgattttatgaagagttaaaactctgtaaatatgatgaata 37269687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 1590170 - 1590226
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1590170 attactcttatcttttttaataaaactaattaatgctatatatttgaaaaactaaag 1590226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 292 - 415
Target Start/End: Complemental strand, 12436588 - 12436464
Alignment:
Q  292 aaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaaga 390  Q
    ||||| |||||||| ||||| ||||||||||||||||  ||| ||||||| |||||||||||||| |||||  || ||||||||| | | | ||||||||    
T  12436588 aaaaataaataaaagactccgtgaatgttcaaaaggaataaaaagtggaacactcgttagaattgttgatgagaggtgaagagggagcaatggttgaaga 12436489  T
Q  391 cccgtttgacaagatacaagaacaa 415  Q
    | | |||||||||||||||||||||    
T  12436488 ctcatttgacaagatacaagaacaa 12436464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 217 - 415
Target Start/End: Complemental strand, 36437280 - 36437077
Alignment:
Q  217 gaagagttaaaattcaataaataagatgaata---attgctaaattt-tcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaa--ctc 309  Q
    ||||||||||||||| ||||||||||||| ||   |||| ||||  | ||||||| |||||||||||| | ||||||||||| || |||||||||  ||     
T  36437280 gaagagttaaaattctataaataagatgagtagcaattgttaaaaatctcaagtgaaaagtaaaagaatatatttgagagaagaa-aaataaaaagactt 36437182  T
Q  310 catgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaa 409  Q
    ||||||| |||||||||| |||| |||||||| |||||| ||||||||||||  || |||||| |  | | ||||||||||| | || ||||||| ||||    
T  36437181 catgaattttcaaaaggaagaaaaagtggaaggctcgttggaattgctgatgagaggtgaagatgaagcaatagttgaagactcattcgacaaga-acaa 36437083  T
Q  410 gaacaa 415  Q
    ||||||    
T  36437082 gaacaa 36437077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 39614935 - 39615064
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaata---attgc 253  Q
    |||||||||| ||||||||| ||||||| |||||| |||||| |||||| ||| || |||| ||||||||||||| ||||||||||| ||||   ||||     
T  39614935 tttgtttcttattatcttcaaatttaaacaaaattgtgttacctataatgatggttctatggagagttaaaattctataaataagataaatagtaattgt 39615034  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca 282  Q
    ||||  ||| ||||||||||||||||||||    
T  39615035 taaaaatttgaagtgcaaagtaaaagaaca 39615064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 14654948 - 14655022
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||    
T  14654948 attattcttatatttttcaataaaactaattaatgctatatatttggaaaactaaagtttgtttttttaaacaaa 14655022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 20201658 - 20201732
Alignment:
Q  60 ttactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||| |||| ||||| ||||||||||||||||| |||| ||||| |||||||||| ||||||||||||| ||||    
T  20201658 ttacttttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtttatttttttaaagaaag 20201732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 1583481 - 1583549
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa 129  Q
    ||||||| ||||||| |||||||||||||||||||||  ||||| |||||||||| || ||||||||||    
T  1583481 tactcttgtctttttcaataaaactaattaatgctatctatttggaaaactaaagtttttttttttaaa 1583549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 39614853 - 39614909
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||||||| |||||    
T  39614853 attactcttatctttttcaacaaaactaattaatgctatatatttgaaaaattaaag 39614909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 12436799 - 12436727
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    ||||||||||| ||||| |||||||||||||||||||||  ||||||||||||| ||  | ||||||||||||||    
T  12436799 attactcttatatttttcaataaaactaattaatgctatctatttgaaaaactacag--tttttttttaaacaaa 12436727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 306 - 420
Target Start/End: Original strand, 17201653 - 17201766
Alignment:
Q  306 actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagat 405  Q
    |||||||||||||| ||| | | |||| |||||||||||||||  ||||| |||||  || ||||||| | | | ||||||||||| | |||||||||||    
T  17201653 actccatgaatgtttaaa-gaaagaaaaagtggaagactcgttgaaattgttgatgagaggtgaagagagagcaatagttgaagactcatttgacaagat 17201751  T
Q  406 acaagaacaaaaaca 420  Q
    |||||||||| ||||    
T  17201752 acaagaacaagaaca 17201766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 16365821 - 16365908
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataa 240  Q
    |||| |||||||||||||||||||||||| ||||||| |||||| |||||| |||  ||||  |  ||||||||||||||||| ||||||||    
T  16365821 aaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacctat--taat--tccatgaagagttaaaattctataaataa 16365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 19931920 - 19932018
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||||||||||||| ||||  | | |||| | |||| |||||||||| ||  |||||||||||||| || ||||||||||||    
T  19931920 tttaaaacaaaatttgtttcttgttatcttcaaattt--agacaatttttttacctataataatggttcaatgaagagttaaaactctataaataagatg 19932017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 440
Target Start/End: Original strand, 28620262 - 28620434
Alignment:
Q  269 aaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaaga 366  Q
    |||||||||||||| ||| |||||| ||| |||||||| | |||||||||||| ||||| | | || ||| ||| ||||||| ||| || |||||  ||     
T  28620262 aaagtaaaagaacagattagagagagaaa-aaataaaagattccatgaatgtttaaaagaaagtaaaagtagaatactcgttggaactgttgatgagagg 28620360  T
Q  367 tgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    ||||||| | ||| || ||||| || | ||||| ||||||||||||||| | |||||||| || ||||||||||    
T  28620361 tgaagagagagaaataattgaaaactcatttgataagatacaagaacaagagcaagatgacaacgaagaagaag 28620434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 19922221 - 19922320
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||||||||||||| |||||||  || || | |||  |||||||||| ||  |||||||||||||| || ||||||||||||    
T  19922221 tttaaaacaaaatttgtttcttgttatcttcaaatttaaa-caattttttttatctataataatggttcaatgaagagttaaaactctataaataagatg 19922319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 32718043 - 32717992
Alignment:
Q  64 tcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| ||||| ||| |||||||||||||||||| ||||||||||||||||    
T  32718043 tcttatatttttcaattaaactaattaatgctatatatttgaaaaactaaag 32717992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 19924908 - 19924981
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||| |||||||||||| ||||||||||||| ||| |||| ||||| |||||||||| || |||||| |||||||    
T  19924908 attattcttatctttttcaataaaactaattcatgttatatatttg-aaaactaaagtttgttttttaaaacaaa 19924981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 19931857 - 19931930
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||| |||||||||||| ||||||||||||| ||| |||| ||||| |||||||||| || |||||| |||||||    
T  19931857 attattcttatctttttcaataaaactaattcatgttatatatttg-aaaactaaagtttgttttttaaaacaaa 19931930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 19922163 - 19922231
Alignment:
Q  64 tcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||| ||||||||||||| ||| |||| ||||| |||||||||| || |||||| |||||||    
T  19922163 tcttatctttttcaataaaactaattcatgttatatatttg-aaaactaaagtttgttttttaaaacaaa 19922231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 315 - 415
Target Start/End: Original strand, 17200330 - 17200429
Alignment:
Q  315 atgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaaca 414  Q
    ||||||||||||| |||| ||||||||| |  || |||   |||||||| | |||||| || ||| ||||||||||| |||||||||||||| |||||||    
T  17200330 atgttcaaaaggaagaaatagtggaagattaattggaacgactgatggagg-tgaagaaggagaaatagttgaagactcgtttgacaagatagaagaaca 17200428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 19924971 - 19925070
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||||||||||||| |||||||  || || | |||  |||||||||| ||  |||||||||||||| || || |||||||||    
T  19924971 tttaaaacaaaatttgtttcttgttatcttcaaatttaaa-caattttttttatttataataatggttcaatgaagagttaaaactctatgaataagatg 19925069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 32717981 - 32717890
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataa 240  Q
    ||||||| || |||| |||||||||||||||| ||||||| |||||| |||||| ||| ||| |  |   |||||||||||||||| ||||||||    
T  32717981 tttaaaacaatatttatttcttgttatcttcaaatttaaacaaaattttgttacctatgatagtagt---tgaagagttaaaattctataaataa 32717890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 11992284 - 11992217
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||||| |||||||||| | ||||| |||||||||||||  ||||| |||||||||| || |||||||    
T  11992284 attacttttatctttttcagtaaaattaattaatgctatttatttggaaaactaaagtttgttttttt 11992217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 17202894 - 17202828
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    |||||| |||||||| | ||||||||||||||||| |||  ||||| |||||||||| || ||||||    
T  17202894 attacttttatctttatcaataaaactaattaatgttatctatttggaaaactaaagtttgtttttt 17202828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 36194086 - 36194032
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||| ||| ||||||||||||| |||  |||||||||| |||||    
T  36194086 tactcttatctttttgaatcaaactaattaatgttatctatttgaaaaattaaag 36194032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 1583544 - 1583640
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||||| ||| ||||||| |||||||||||| | ||||| |||||| |||||||   || |||| || | ||||||||||||||| ||||  |||||||    
T  1583544 tttaaaacaaagtttgttttttgttatcttcaaacttaaacaaaattttgttaca---aacaatggttcaagaagagttaaaattctataataaagatga 1583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 8544798 - 8544745
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaacta 112  Q
    ||||||||||||||||| ||||||||||||||| | |||  ||||| |||||||    
T  8544798 attactcttatctttttcaataaaactaattaacgttatttatttggaaaacta 8544745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 13220100 - 13220055
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaa 106  Q
    |||| |||||||||||||||||||||||| |||||||  |||||||    
T  13220100 tacttttatcttttttaataaaactaattcatgctatctatttgaa 13220055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 20201755 - 20201800
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttac 199  Q
    ||| |||||||||||||||||||| ||||||| |||||| ||||||    
T  20201755 aaactttgtttcttgttatcttcaaatttaaacaaaattttgttac 20201800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 37345844 - 37345889
Alignment:
Q  169 ttatcttcatatttaaataaaattctgttacatataataatgattt 214  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||    
T  37345844 ttatctttaaattaaaataaaattttgttacatataataatgattt 37345889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 17591667 - 17591722
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| ||||||||||| ||||| |||  ||||| ||||||||||    
T  17591667 attactcttatctttttcaataaaactaa-taatgttatcaatttggaaaactaaag 17591722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 36246351 - 36246295
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| |||||||||||| ||| ||||   |||| ||||||||||    
T  36246351 attactcttatctttttcaataaaactaatgaatactatctgtttggaaaactaaag 36246295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 154 - 451
Target Start/End: Complemental strand, 38751082 - 38750783
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattg 252  Q
    ||||||||||||||||||||| || ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||||    
T  38751082 aaaatttgtttcttgttatctacagatttaaacaaaattttgttacatataataatgattttatgaagagttaaaattctataaataagacgaataattg 38750983  T
Q  253 ctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttaga 351  Q
     ||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||  |    
T  38750982 ttaaaaatttcaagtgtaaagtaaaagaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaagaaagagtggaagactcattgaa 38750883  T
Q  352 attgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatcg 451  Q
    | |||||||||||| ||||||||| ||||||||||||||  |||||||||| ||| |||||||||||||| |||| ||||||||||||||| ||||||||    
T  38750882 actgctgatggaaggtgaagagggagaagtagttgaagattcgtttgacaatatataagaacaaaaacaaaatgacaatgaagaagaagaaatttcatcg 38750783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 212 - 450
Target Start/End: Complemental strand, 21934463 - 21934224
Alignment:
Q  212 tttatgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactcc 310  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||     
T  21934463 tttatgaagagttaaaattctataaataagatgaataattgttaaaaatttcaagtgcaaagtaaatgaacaatttgagagaaaaataaataaaaactct 21934364  T
Q  311 atgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaag 410  Q
    |||||||||||||| ||  ||| |||||||||||| || ||| || ||||||||| ||||||||| ||||||||||||||| |||||||||| |||||||    
T  21934363 atgaatgttcaaaaagaataaatagtggaagactcattggaactgttgatggaaggtgaagagggagaagtagttgaagactcgtttgacaatatacaag 21934264  T
Q  411 aacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    || ||||||||||||| ||||||||| |||||||||||||    
T  21934263 aaaaaaaacaagatgacaatgaagaataagaagtttcatc 21934224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 67 - 424
Target Start/End: Original strand, 9588772 - 9589138
Alignment:
Q  67 tatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt-aaacaaagnnnnnnnnatgtttaaaataaaatttgtttc 165  Q
    ||||||||| || |||||||||||||| |||| ||||| |||||||||| || ||||||| ||||||||         | | ||||| ||| ||||||||    
T  9588772 tatctttttcaaaaaaactaattaatgttatatatttggaaaactaaagtttgttttttttaaacaaagtttgtttgttttataaaacaaagtttgtttc 9588871  T
Q  166 ttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgctaaat-tt 260  Q
    |||||||||| | ||||||| |||| | |||||| |||||||||||||| ||||| ||||||||||  ||||||||||||| ||   |||  ||||  ||    
T  9588872 ttgttatcttaaaatttaaacaaaactttgttacctataataatgatttcatgaatagttaaaattatataaataagatgagtaggaattattaaaaatt 9588971  T
Q  261 tcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgct 357  Q
    |||||||||||||||||||||  || ||||||||||| ||| ||||| ||||||||||||||||||||||  ||  ||||||||||| ||| |||  |||    
T  9588972 tcaagtgcaaagtaaaagaacggatatgagagaaaaataaaataaaagactccatgaatgttcaaaaggaataataagtggaagacttgttggaacggct 9589071  T
Q  358 gatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagat 424  Q
     |||| || ||||||||  ||| ||||||||||| |||| ||||||||| |||||||| ||||||||    
T  9589072 tatgggaggtgaagaggaagaaatagttgaagactcgttcgacaagatagaagaacaagaacaagat 9589138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 204 - 370
Target Start/End: Original strand, 21915591 - 21915761
Alignment:
Q  204 aataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaa-tttgagagaaaa-acaa 299  Q
    ||||||||||| | ||||||||||||||| ||| ||||||| |||||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||    
T  21915591 aataatgattttacgaagagttaaaattctatagataagataaataattgctaaaaatttcaagtgcaaagtaaaagaacaaatttgagagaaaaaacaa 21915690  T
Q  300 ataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaa 370  Q
    ||||||||||||||||||||||||||||  || |||||||||||| ||| ||| || ||||||||| ||||    
T  21915691 ataaaaactccatgaatgttcaaaaggaataacgagtggaagacttgttggaactgttgatggaaggtgaa 21915761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 21934580 - 21934475
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttta 127  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||    
T  21934580 tgtcaattactcgtatctttttctttgtttggttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttgttttttta 21934481  T
Q  128 aacaaa 133  Q
    ||||||    
T  21934480 aacaaa 21934475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 423
Target Start/End: Original strand, 2599156 - 2599420
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaa 256  Q
    |||||||||||||||||| | ||||||| |||||| |||||||   || |||| ||| | ||| ||||||||||| ||||||||||| || ||||| |||    
T  2599156 tttgtttcttgttatctttaaatttaaacaaaattgtgttaca---aacaatggtttcaagaaaagttaaaattctataaataagat-aacaattgttaa 2599251  T
Q  257 attttc-aagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaatt 354  Q
    |  ||| ||||| |||||||||||||| ||||||||| | || ||  |||||||||||||||||||||||||| || | ||||||||||||||| |||||    
T  2599252 aaattccaagtgtaaagtaaaagaacagatttgagaggagaaaaataaaaaactccatgaatgttcaaaaggaagagaaagtggaagactcgttggaatt 2599351  T
Q  355 gctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaaga 423  Q
     || ||| ||| ||||||| | | | ||||||||||| | ||||||| ||||||| ||||| |||||||    
T  2599352 actaatgaaaggtgaagagagagcaatagttgaagactcatttgacatgatacaaaaacaagaacaaga 2599420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 158 - 450
Target Start/End: Complemental strand, 37030962 - 37030664
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgc 253  Q
    |||||||||||||||||||| ||||||| |||||| |||||||   || |||| ||  | ||||||||||||||| |||| |||||||| ||   ||||     
T  37030962 tttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aacaatggttccaagaagagttaaaattcgataactaagatgagtatcaattgt 37030866  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaa---tgttcaaaaggaggaaagagtggaagactcgt 347  Q
    ||||  ||||||| ||||||||||| || | ||||||||||| || |||||||| |||||||| |   || ||||||||| |||| ||||||||||||||    
T  37030865 taaaaatttcaagggcaaagtaaaataaaagatttgagagaagaa-aaataaaagactccatgtagtatgctcaaaaggatgaaaaagtggaagactcgt 37030767  T
Q  348 tagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttc 447  Q
    |  ||||| |||||  |  ||||||||| | | |||||||| || | || |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  37030766 tgaaattgatgatgagatgtgaagagggagcaatagttgaaaactcattcgacaagatacaagaacaagaacaagatgacaatgaagaagaagaagtttc 37030667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 59 - 415
Target Start/End: Original strand, 296453 - 296818
Alignment:
Q  59 attactcttatctttttta-ataaaactaattaatgctatacatttgaaaaactaaagcttattttttt-aaacaaagnnnnnnnnatgtttaaaataaa 156  Q
    ||||||||||||||||||  |||||||||||| |||||||| ||||| |||||||||| |||||||||| |||||||          | ||||||| |||    
T  296453 attactcttatcttttttctataaaactaatttatgctatatatttggaaaactaaagtttatttttttaaaacaaattttttcgtttttttaaaacaaa 296552  T
Q  157 atttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg---aataattg 252  Q
     || ||||||||||||||| | ||||||| |||||| ||||  ||||||||||| || |||||| ||||||||||| ||||||||||||   | ||||||    
T  296553 tttcgtttcttgttatcttaaaatttaaacaaaattttgtt--atataataatggttctatgaatagttaaaattctataaataagatgagtagtaattg 296650  T
Q  253 ct-aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa--actccatgaatgttcaaaaggaggaa-agagtggaagactcgt 347  Q
     | ||| ||||||||||||| ||||| |||| |||||||||||||| |||  |||  |||| || |||||||||||  |  || |||||||||||||| |    
T  296651 ttaaaaatttcaagtgcaaaataaaaaaacagatttgagagaaaaataaaataaaggactctataaatgttcaaaaaaaaaaatagagtggaagactcat 296750  T
Q  348 tagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    | |||  |||||||| || ||||||| |  || ||||||| ||| ||||||| |||||| ||||||||    
T  296751 tggaacggctgatgggaggtgaagagagataaatagttgaggactcgtttgataagatagaagaacaa 296818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 44940993 - 44940863
Alignment:
Q  1 taaggatacgatttgtcaattatactctgt--cagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctata 98  Q
    ||||| |||||||| |||||||||| || |  || ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  44940993 taagggtacgatttttcaattataccctttatcaattactcgtatctttttctttgtttggttacttttatcttttttaataaaactaattaatgctata 44940894  T
Q  99 catttgaaaaactaaagcttatttttttaaa 129  Q
     |||||||||| ||||| || ||||||||||    
T  44940893 tatttgaaaaattaaagtttgtttttttaaa 44940863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 261 - 450
Target Start/End: Complemental strand, 16237482 - 16237295
Alignment:
Q  261 tcaagtgcaaagtaaaagaacaattt-gagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaaga-gtggaagactcgttagaattgct 357  Q
    ||||||||||||||||||||||| || ||||||| || |||||||| | |||||||||||||||||| |  ||| | |||||||||||||| ||||||||    
T  16237482 tcaagtgcaaagtaaaagaacaagttagagagaagaa-aaataaaagattccatgaatgttcaaaagaaaaaaaaaagtggaagactcgttggaattgct 16237384  T
Q  358 gatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
     |||  |||||||||||| | | ||||||||||| | ||||||||||||||||||||| |||||    | |||||||||||||||||||||||    
T  16237383 aatgagagatgaagagggagcaatagttgaagactcatttgacaagatacaagaacaagaacaa----acaatgaagaagaagaagtttcatc 16237295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 443
Target Start/End: Original strand, 34668881 - 34669066
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgct 357  Q
    |||||||||||||||| || |||| ||||||||| |  | ||  |||||||||| |||||||||||| || |||| |||||||||||||||  |||||||    
T  34668881 tttcaagtgcaaagtagaaaaacagatttgagaggaggaaaataaaaaactccacgaatgttcaaaaagaagaaaaagtggaagactcgttgaaattgct 34668980  T
Q  358 gatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaag 443  Q
    |||| | | ||||||||| | | ||||||||||| | |||||||||||| |||||||| ||  ||||||  |||||||||||||||    
T  34668981 gatgaagggtgaagagggagcaatagttgaagactcatttgacaagataaaagaacaagaaacagatgacgatgaagaagaagaag 34669066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 375
Target Start/End: Original strand, 20841413 - 20841633
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgc 253  Q
    |||||||||| ||||||| | ||||||| |||||| |||||||   || |||| ||| | ||| ||||||||||| ||||||||||||| |||   |||     
T  20841413 tttgtttcttattatctttaaatttaaacaaaattgtgttaca---aacaatggtttcaagaaaagttaaaattctataaataagatgagtaacaattgt 20841509  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttaga 351  Q
    ||||  |||||||||||||||||||||||| ||||||||| | || ||  |||||| |||||||||||||||||||  ||| |||| ||||||| || ||    
T  20841510 taaaaatttcaagtgcaaagtaaaagaacagatttgagaggagaaaaataaaaaacaccatgaatgttcaaaaggaaaaaaaagtgaaagactcattgga 20841609  T
Q  352 attgctgatggaagatgaagaggg 375  Q
    ||||| |||| ||| |||||||||    
T  20841610 attgccgatgaaaggtgaagaggg 20841633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 38751183 - 38751097
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaa 114  Q
    ||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||||||| ||||| |||||||||    
T  38751183 tgtcaattactcgtatctttctctttgtttggttactcttgtcttttttaataaaactaagtaatgctatatatttggaaaactaaa 38751097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 217 - 415
Target Start/End: Complemental strand, 45759857 - 45759654
Alignment:
Q  217 gaagagttaaaattcaataaataagatgaata---attgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactcca 311  Q
    ||||||||||||||  ||||||||||||| ||   |||| ||||| ||||||||||||||| |||||||| ||||| ||||| || || |||| ||||||    
T  45759857 gaagagttaaaattgtataaataagatgagtagcaattgttaaatatttcaagtgcaaagtgaaagaacatatttgtgagaagaaaaattaaagactcca 45759758  T
Q  312 tgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaaga 411  Q
    | ||||||||||| ||  |||||||||||||||| ||  || | || |||  || ||||||||| ||| ||||| ||||| | ||||||||||||||| |    
T  45759757 taaatgttcaaaaagaataaagagtggaagactcattgaaactactaatgagaggtgaagagggagaaatagttaaagacacatttgacaagatacaata 45759658  T
Q  412 acaa 415  Q
    ||||    
T  45759657 acaa 45759654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 149 - 375
Target Start/End: Complemental strand, 15638485 - 15638251
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatg--- 244  Q
    |||| ||| |||||||||||||||||| | ||| ||| |||||| |||||| |||||||||| ||| ||||| |||||||||||   ||||||||||       
T  15638485 aaaacaaagtttgtttcttgttatcttaaaattcaaacaaaattttgttacctataataatggtttcatgaatagttaaaattcttaaaataagatgagt 15638386  T
Q  245 aataattgct-aaattttcaagtgcaaagtaaaagaac-aatttgagagaaaaa-caaataaaa-actccatgaatgttcaaaaggaggaaagagtggaa 340  Q
    | |||||| | ||| | ||| ||||||||||||||||| |||| | ||||||||  |||||||| ||||||||||||||||||||||  ||| |||| ||    
T  15638385 agtaattgttaaaaatatcatgtgcaaagtaaaagaacaaattagtgagaaaaataaaataaaagactccatgaatgttcaaaaggaaaaaaaagtgtaa 15638286  T
Q  341 gactcgttagaattgctgatggaagatgaagaggg 375  Q
    ||||| || |||   ||||||| || |||||||||    
T  15638285 gactcattcgaacgactgatgggaggtgaagaggg 15638251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 158 - 345
Target Start/End: Original strand, 375844 - 376035
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatgaa---taattgct 254  Q
    |||||||||||||||| | | |||| || |||||| |||||| |||||||||||||   ||| ||||||||||  |||||||| ||||    |||||| |    
T  375844 tttgtttcttgttatcctaaaattttaacaaaattttgttacctataataatgatt---gaatagttaaaattttataaataaaatgagcagtaattgtt 375940  T
Q  255 aaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    |||  ||||||||||||| |||||||||| ||||| |||||||| ||| ||||| ||| ||||||||||||||||||  |||||||| |||||||    
T  375941 aaaaatttcaagtgcaaaataaaagaacatatttgggagaaaaataaaataaaagactgcatgaatgttcaaaaggaataaagagtgaaagactc 376035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 3751562 - 3751650
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||||||||||||||||| | ||||||| |||||| | |||| |||||||||| ||| ||||||||||||||||| |||||||||||||    
T  3751562 tttgtttcttgttatctttaaatttaaacaaaattttcttacctataataatggtttcatgaagagttaaaattctataaataagatga 3751650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 7259771 - 7259623
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||| |||||||    || |||||||||||||||         | ||||||| |||||    
T  7259771 attattcttatatttttcaataaaactaattaatgctatatatttggaaaacta----ttttttttttaaacaaagcttgttttgt-tttaaaacaaaat 7259677  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgat 212  Q
    ||||||||| ||||||||| ||||||| |||||| |||||| ||| ||||||||    
T  7259676 ttgtttcttattatcttcaaatttaaacaaaattttgttacctatgataatgat 7259623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 345
Target Start/End: Original strand, 6749087 - 6749276
Alignment:
Q  161 gtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgct----a 255  Q
    ||||||||||||| ||| ||||| | |||||| || ||| ||| |||||| ||| || |||||||||||||  ||||||||||||| || | | |    |    
T  6749087 gtttcttgttatcctcaaatttatacaaaattttgctacctatcataatggtttcataaagagttaaaattttataaataagatgagtagtagttgttaa 6749186  T
Q  256 aattttcaagtgcaaagtaaaagaacaatt-tgaga--gaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    || |||||||||| |||||||||||||| | |||||  ||||||||||   | ||| |||||||||||||||||| |||||||||||||||||    
T  6749187 aaatttcaagtgctaagtaaaagaacaaatctgagaaagaaaaacaaa---agacttcatgaatgttcaaaaggaagaaagagtggaagactc 6749276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 190
Target Start/End: Complemental strand, 25842000 - 25841866
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnat---gtttaaaataa 155  Q
    |||| |||||| ||||| |||||||||||||||||||||| ||||| |||||||||  || |||||||||||||||         |    ||||||| ||    
T  25842000 attaatcttatatttttcaataaaactaattaatgctatatatttggaaaactaaaatttgtttttttaaacaaagtttgtttgttttgttttaaaacaa 25841901  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaa 190  Q
    ||||||||| |||||||||||| ||||||||||||    
T  25841900 aatttgttttttgttatcttcaaatttaaataaaa 25841866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 348
Target Start/End: Original strand, 5493644 - 5493845
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaat 247  Q
    |||| ||| |||||||||| ||||||||| ||||||| |||||| ||||| |    | |||| || || ||| ||||||||||| ||||||||||||| |    
T  5493644 aaaacaaagtttgtttcttattatcttcaaatttaaacaaaattttgttaaa----acaatggttgtaagaaaagttaaaattctataaataagatgagt 5493739  T
Q  248 a---attgctaaatt-ttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaag 341  Q
    |   |||| ||||   |||||||||||||||||||||||  |||||||||| || |||||||| |||||||||| ||||||||| | |||| |||| |||    
T  5493740 agaaattgttaaaaaattcaagtgcaaagtaaaagaacatgtttgagagaagaa-aaataaaagactccatgaacgttcaaaagaaagaaaaagtgaaag 5493838  T
Q  342 actcgtt 348  Q
    |||||||    
T  5493839 actcgtt 5493845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 6472719 - 6472527
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgct-- 254  Q
    |||||||||||||||  ||| ||||| | |||||| |||||| || |||| || ||| || |||||||||||||  ||||||||||||| || | | |      
T  6472719 tttgtttcttgttattctcaaatttatacaaaattttgttacctacaatattggtttcataaagagttaaaattttataaataagatgagtagtagttgt 6472620  T
Q  255 --aaattttcaagtgcaaagtaaaagaaca-atttgaga--gaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
      ||| |||||||||| ||||||||||||| || |||||  ||||||||||   | | | |||||||||||||||||| |||||||||||||||||    
T  6472619 taaaaatttcaagtgctaagtaaaagaacagatctgagaaagaaaaacaaa---agatttcatgaatgttcaaaaggaagaaagagtggaagactc 6472527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 6512560 - 6512463
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||| ||| |||||||||||||||| ||| ||||| | |||||| |||||| |||||||||| ||| |||||||||||| |||  |||||||||||||    
T  6512560 aaaaaaaagtttgtttcttgttatcctcaaatttatacaaaattttgttacctataataatggtttcatgaagagttaacattttataaataagatga 6512463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 633350 - 633286
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttt 123  Q
    |||||||||||| |||| ||||||||||||||||| |||| ||||| |||||||||| |||||||    
T  633350 attactcttatcattttcaataaaactaattaatgttatatatttggaaaactaaagtttatttt 633286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 54675250 - 54675192
Alignment:
Q  56 ttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||||||||||||||||| || |||||||||||||| |||| ||||||||||||||||    
T  54675250 ttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaag 54675192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 45760019 - 45759965
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaa 113  Q
    ||||||||||||||| | |||||||||||||||||||||  ||||||||||||||    
T  45760019 attactcttatctttctcaataaaactaattaatgctatctatttgaaaaactaa 45759965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 438
Target Start/End: Complemental strand, 19229686 - 19229498
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattg 355  Q
    |||||||||||||||||||||||| |||||| | ||||  ||| ||||| || |||| ||||||||||| || |||||||| ||||||||||| |||       
T  19229686 tttcaagtgcaaagtaaaagaacagatttgaaaaaaaattaaaataaaagaccccatcaatgttcaaaaagaagaaagagtagaagactcgttggaacga 19229587  T
Q  356 ctgatg------gaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaaga 438  Q
    ||||||      |||| ||||||| |  || || |||||  | |||||||||||||| |||| ||| |||||||||| |||||||||||    
T  19229586 ctgatgagaggtgaaggtgaagagagataaataattgaaatctcgtttgacaagataaaagatcaataacaagatgacaatgaagaaga 19229498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 20841344 - 20841412
Alignment:
Q  65 cttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||| ||||| |||||||||||||||||||||  |||||||||||||||| |  |||||||||||||||    
T  20841344 cttatttttttcaataaaactaattaatgctatctatttgaaaaactaaag-tattttttttaaacaaag 20841412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 21959706 - 21959606
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||| |||| |||||||||||| ||||||| |||||  |||||| ||| ||||| | |  ||||||||||||||||| |||||||| |||    
T  21959706 tttaaaacaaaattagtttattgttatcttcaaatttaaacaaaatgttgttacctatgataatagttccatgaagagttaaaattctataaataacatg 21959607  T
Q  245 a 245  Q
    |    
T  21959606 a 21959606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 45646619 - 45646675
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| || ||||||| |||||||||||||||||||||  ||||||||||||||||    
T  45646619 attacttttttctttttcaataaaactaattaatgctatctatttgaaaaactaaag 45646675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 25342444 - 25342389
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaa 114  Q
    |||||| ||||| |||||||||||||||||||||| |||| ||||| |||||||||    
T  25342444 attacttttatcgtttttaataaaactaattaatgttatatatttggaaaactaaa 25342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 5493572 - 5493626
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaa 113  Q
    ||||||||||||||||| ||||||||||||||||| | |  ||||||||||||||    
T  5493572 attactcttatctttttcaataaaactaattaatgttgtctatttgaaaaactaa 5493626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Complemental strand, 19187732 - 19187675
Alignment:
Q  58 gattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| ||||| ||||| ||||||||||||||||| |||| |||||||||| |||||    
T  19187732 gattacacttatttttttcaataaaactaattaatgatatatatttgaaaaattaaag 19187675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 375765 - 375801
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgct 95  Q
    ||||||||||||||||||||||||| |||||||||||    
T  375765 attactcttatcttttttaataaaattaattaatgct 375801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 1272445 - 1272489
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacattt 103  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||    
T  1272445 attactcttatatttttcaataaaactaattaatgctatatattt 1272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 2093795 - 2093862
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||||| |||||||||| | | ||| |||||||||||||  |||||||||||||||| || |||||||    
T  2093795 attacttttatctttttcagtcaaattaattaatgctatctatttgaaaaactaaagttttttttttt 2093862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 20141076 - 20141002
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||| |||||||| |||||||| |||  |||| ||||| ||||| || |||| ||||||||||    
T  20141076 attactcttatctttttcaataaaacaaattaatgttatgtatttaaaaaattaaag-tttttttcttaaacaaag 20141002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 23272073 - 23272128
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaa 114  Q
    |||| |||||||||||| |||||||| ||||||||||||| |||| ||||| ||||    
T  23272073 attattcttatctttttcaataaaacaaattaatgctatatatttaaaaaattaaa 23272128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 109
Target Start/End: Complemental strand, 19234057 - 19234007
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaa 109  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||| ||||    
T  19234057 attactcttatctttttcaataaaaaaaattaatgctatatatttggaaaa 19234007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 23772311 - 23772242
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatg--ctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||| ||||| |||||||||||| ||||   |||| |||||||||||||||| || |||||||    
T  23772311 attactcttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagttttttttttt 23772242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 27264132 - 27264170
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctat 97  Q
    ||||||||||||||||| ||||||| |||||||||||||    
T  27264132 attactcttatctttttcaataaaattaattaatgctat 27264170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3751496 - 3751553
Alignment:
Q  77 aataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||| |||| ||||| ||| |||||| || ||||| |||||||||    
T  3751496 aataaaactaattaatgttatatatttggaaacctaaagtttgtttttctaaacaaag 3751553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 23701941 - 23701844
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||| |||||||||||  ||||||||| | ||||||| |||||| |||||  ||||| |||| ||| ||||| | || |||||| |||||||||||||    
T  23701941 aaaacaaaatttgtttaatgttatctttaaatttaaacaaaattttgttatctataacaatggtttcatgaataattgaaattctataaataagatga 23701844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 23702012 - 23701940
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacat--ttgaaaaactaaagcttatttttttaaa 129  Q
    |||||| |||| ||||| |||||||||||| |||| |||| ||  |||||||||||||| || ||||||||||    
T  23702012 attacttttatatttttcaataaaactaataaatgttatatatatttgaaaaactaaagtttttttttttaaa 23701940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 23720396 - 23720299
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||| |||||||||||  ||||||||| | ||||||| |||||| |||||  ||||| |||| ||| ||||| | || |||||| |||||||||||||    
T  23720396 aaaacaaaatttgtttaatgttatctttaaatttaaacaaaattttgttatctataacaatggtttcatgaataattgaaattctataaataagatga 23720299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 23738852 - 23738755
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||| |||||||||||  ||||||||| | ||||||| |||||| |||||  ||||| |||| ||| ||||| | || |||||| |||||||||||||    
T  23738852 aaaacaaaatttgtttaatgttatctttaaatttaaacaaaattttgttatctataacaatggtttcatgaataattgaaattctataaataagatga 23738755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 27817442 - 27817511
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctt-atttttttaaacaaag 134  Q
    |||||||||| |||||||||||| ||| || |  |||||||||||||||| ||  |||||||||||||||    
T  27817442 ttatctttttcaataaaactaatgaattctctctatttgaaaaactaaagtttgttttttttaaacaaag 27817511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 169 - 244
Target Start/End: Complemental strand, 29556498 - 29556422
Alignment:
Q  169 ttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatg 244  Q
    |||| |||| ||||||| |||||| |||||| | |||||||| ||| ||||| |||| |||||| ||||||||||||    
T  29556498 ttattttcaaatttaaacaaaattttgttacctttaataatggtttcatgaatagttgaaattctataaataagatg 29556422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 34668713 - 34668757
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||||    
T  34668713 tttttgaataaaactaattaatgctatctatttggaaaactaaag 34668757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 45667475 - 45667551
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctt-atttttttaaacaaag 134  Q
    |||||| | |||||||| ||||||| |||||||||||||  ||||| ||||| |||| ||  |||||||||||||||    
T  45667475 attactttgatctttttcaataaaattaattaatgctatctatttggaaaacgaaagtttgttttttttaaacaaag 45667551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 196 - 450
Target Start/End: Complemental strand, 40519164 - 40518909
Alignment:
Q  196 ttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaa 293  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  40519164 ttacatata-taatgattttatgaagagttaaaattctataaataagatgaataattgttaaaaatttcaagtgcaaagtaaaagaacaatttgagagaa 40519066  T
Q  294 aaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagaccc 393  Q
    ||| ||||||||||| |||||||||||||||||| |||| |||||||||||| || |||  ||||||||||| ||||||||| ||||||||||||||  |    
T  40519065 aaataaataaaaactgcatgaatgttcaaaaggaagaaacagtggaagactcattggaaccgctgatggaaggtgaagagggagaagtagttgaagattc 40518966  T
Q  394 gtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  40518965 gtttgacaatatacaagaaaaaaaacaagatgacaatgaagaagaagaagtttcatc 40518909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 23699556 - 23699203
Alignment:
Q  1 taaggatacgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctata 98  Q
    ||||||||||||||||||||||||| ||  |||| ||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  23699556 taaggatacgatttgtcaattataccctttgtcaattactcgtatctttttctttgtttggttacgcttatctttttcaataaaactaattaatgctata 23699457  T
Q  99 catttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgttt----aaaataaaatttgtttcttgttatcttcatatttaaataaaattct 194  Q
     ||||| |||||||||| || || ||||||||||||         | |||    |||| ||||| |||||||||||||||||| ||||||| |||||| |    
T  23699456 tatttggaaaactaaagtttcttcttttaaacaaagattgtttgttttttttttaaaacaaaatgtgtttcttgttatcttcagatttaaacaaaatttt 23699357  T
Q  195 gttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaatt-ttcaagtgcaaagtaaaagaaca-atttgagag 291  Q
    ||||| | || ||||| ||| ||||||||||||||||| || ||||||||||||||||| ||||   || |||||||||||||||||||| |||||||||    
T  23699356 gttacttgtattaatggttttatgaagagttaaaattctatgaataagatgaataattgttaaaaaatttaagtgcaaagtaaaagaacagatttgagag 23699257  T
Q  292 aaaaaca-aataaaaactccatgaatgttcaaaaggaggaaagagtggaagact 344  Q
    ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  23699256 aaaaaaataataaaaactccatgaatgttcaaaaggaagaaagagtggaagact 23699203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 212 - 450
Target Start/End: Original strand, 30280167 - 30280407
Alignment:
Q  212 tttatgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactcc 310  Q
    |||||||||||||||||||  ||||||||||| |||||||| ||||  |||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  30280167 tttatgaagagttaaaattttataaataagatcaataattgttaaaaatttcaagtgcaaagtaaaagaataatttgaaagaaaaataaataaaaactcc 30280266  T
Q  311 atgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgac---aagatac 407  Q
    ||||||||| ||||||| |||| |||||||||||| || ||| |||||||||||| ||||||||| ||||||||||||||  ||||||||   || ||||    
T  30280267 atgaatgttgaaaaggaagaaatagtggaagactcattggaactgctgatggaaggtgaagagggagaagtagttgaagattcgtttgacaataatatac 30280366  T
Q  408 aagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||  ||||||||||||| |||||||||||||||||||||||    
T  30280367 aaga--aaaaacaagatgacaatgaagaagaagaagtttcatc 30280407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 154 - 450
Target Start/End: Complemental strand, 13254754 - 13254454
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattca-ataaataagatgaata--- 248  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||   || |||| ||| | ||||||||||||||   ||||| ||||||| ||       
T  13254754 aaaatttgtttcttattatcttcaaatttaaataaaattttgttaca---aacaatggtttcaagaagagttaaaatttttataaaaaagatgagtagca 13254658  T
Q  249 attgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    |||| ||||  ||| |||||||||||||||||||| |||||||| |  || |||||||| | ||||||||||| |||||||| |||| ||| ||||||||    
T  13254657 attgttaaaaatttaaagtgcaaagtaaaagaacatatttgagacatgaa-aaataaaagagtccatgaatgtccaaaaggaagaaaaagtagaagactc 13254559  T
Q  346 gttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtt 445  Q
    ||| ||||||||||||  || ||||||| | | | ||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  13254558 gttggaattgctgatgagaggtgaagagtgagcaatagttgaagactcatttgacaagatacaagaacaagaacaagatgacaatgaagaagaagaagtt 13254459  T
Q  446 tcatc 450  Q
    |||||    
T  13254458 tcatc 13254454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 32768955 - 32769081
Alignment:
Q  1 taaggatacgatttgtcaattatactctgt--cagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctata 98  Q
    ||||| |||||||||||||||||||||| |  || ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  32768955 taagggtacgatttgtcaattatactctttatcaattactcgtatctttttctttgtttggttaatcttatcttttttaataaaactaattaatgatata 32769054  T
Q  99 catttgaaaaactaaagcttatttttt 125  Q
     |||||||||||||||| |||||||||    
T  32769055 tatttgaaaaactaaagtttatttttt 32769081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 146 - 345
Target Start/End: Complemental strand, 1674766 - 1674566
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||| ||  ||||| ||||||||||| ||||||||||||    
T  1674766 tttaaaataaaatttgtttcttgttatcttcaaatttaaataaaattttgttatctatgataatggttccatgaaaagttaaaattctataaataagatg 1674667  T
Q  245 ---aataattgct-aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtgga 339  Q
       |||| ||| | ||| |||||||||||||||||||||||| || |||||||||||     ||| ||| |||||||||| ||||||| |||||||||||    
T  1674666 agtaatacttgttaaaaatttcaagtgcaaagtaaaagaacatatctgagagaaaaa-----aaagacttcatgaatgtttaaaaggaagaaagagtgga 1674572  T
Q  340 agactc 345  Q
    ||||||    
T  1674571 agactc 1674566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 40519298 - 40519192
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttta 127  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||    
T  40519298 tgtcaattactcgtatatttttctttgtttggttactcttatcttttttaataaaactaattaatgctatatatttggaaaactaaagtttgttttttta 40519199  T
Q  128 aacaaag 134  Q
    |||||||    
T  40519198 aacaaag 40519192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 52414900 - 52415027
Alignment:
Q  1 taaggatacgatttgtcaattata--ctctgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctata 98  Q
    ||||| || |||||||||||||||  || ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  52414900 taagggtatgatttgtcaattataacctttgtcaattactcgtatctttttctttgtttggttactcttatcttttttaataaaactaattaatgttata 52414999  T
Q  99 catttgaaaaactaaagcttattttttt 126  Q
     ||||| |||||||||| || |||||||    
T  52415000 tatttggaaaactaaagtttgttttttt 52415027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 158 - 415
Target Start/End: Complemental strand, 4396046 - 4395776
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt------atgaagagttaaaattcaataaataagatgaata--- 248  Q
    ||||||||| |||| ||| | ||||||| |||| | |||||| |||||||||| |||      ||||| ||||||||||| ||||||||||||||||       
T  4396046 tttgtttctcgttagcttaaaatttaaacaaaactttgttacctataataatggtttcatttcatgaatagttaaaattctataaataagatgaatagta 4395947  T
Q  249 attgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagact 344  Q
    |||| ||||  |||||||||||||||||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||| ||  |||||||| ||||||    
T  4395946 attgttaaaaatttcaagtgcaaagtaaaagaacatatctgagagaaaaataaaataaaagactccatgaatgttcaaaacgaaaaaagagtgaaagact 4395847  T
Q  345 cgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    | || |||| | |||||| || |||| ||   ||| ||||||||||| ||||| |||||||| ||||||||    
T  4395846 cattggaatggatgatgggaggtgaatagaaagaaatagttgaagactcgtttaacaagatagaagaacaa 4395776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 129
Target Start/End: Original strand, 4671384 - 4671508
Alignment:
Q  7 tacgatttgtcaattatactctgt--cagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttg 104  Q
    |||||||| |||||||||| || |  || ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||    
T  4671384 tacgatttttcaattataccctttatcaattactcgtatcttgttctttgtttggttactcttatcttttttaataaaactaattaatactatatatttg 4671483  T
Q  105 aaaaactaaagcttatttttttaaa 129  Q
     |||||||||  || ||||||||||    
T  4671484 gaaaactaaaatttgtttttttaaa 4671508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 30280005 - 30280131
Alignment:
Q  9 cgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaa 106  Q
    ||||||||||||||||| ||  |||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| | || ||||| |    
T  30280005 cgatttgtcaattataccctttgtcaattactcgtatttttttctttgtttggttactcttatcttctttaataaaactaattaatgttgtatatttgga 30280104  T
Q  107 aaactaaagcttatttttttaaacaaag 134  Q
    ||||||||| ||  ||||||||||||||    
T  30280105 aaactaaag-tttgttttttaaacaaag 30280131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 332 - 450
Target Start/End: Original strand, 19269961 - 19270079
Alignment:
Q  332 agagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatg 431  Q
    ||||||||||||||  ||||| ||||||||| || |||||| || ||| ||||||||||| | |||||||||||| |||||||| ||||| |||| ||||    
T  19269961 agagtggaagactcactagaactgctgatgggaggtgaagacggagaaatagttgaagactcatttgacaagatagaagaacaagaacaaaatgacaatg 19270060  T
Q  432 aagaagaagaagtttcatc 450  Q
    |||||||||||||||||||    
T  19270061 aagaagaagaagtttcatc 19270079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 424
Target Start/End: Complemental strand, 11237968 - 11237801
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagac-tcgttagaattg 355  Q
    |||||||||||||||||||||| | || | |||||| || ||||||||  ||||||||||||||||||| | |||||||| ||| || || || ||| ||    
T  11237968 tttcaagtgcaaagtaaaagaatagatctcagagaagaa-aaataaaagcctccatgaatgttcaaaagaaagaaagagtcgaaaacttcattggaactg 11237870  T
Q  356 ctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagat 424  Q
    ||||||| || |||||| || ||||||||||||||| | ||||||||||||||||| ||||||||||||    
T  11237869 ctgatgggagctgaagatggagaagtagttgaagactcatttgacaagatacaagatcaaaaacaagat 11237801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 415
Target Start/End: Complemental strand, 6295639 - 6295478
Alignment:
Q  255 aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
    |||||||||||||| |||||||| |||| ||||| ||||| || |||||||| ||||||||||| |||||||||| |||| ||||||||| ||||| |||    
T  6295639 aaattttcaagtgctaagtaaaataacatatttgcgagaagaa-aaataaaagactccatgaatcttcaaaaggaagaaaaagtggaagattcgttggaa 6295541  T
Q  353 ttgctgatg-gaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    ||||||||| |||| |||||| || | | || |||||||| | |||||||||||||||||||||    
T  6295540 ttgctgatgagaag-tgaagaaggagcactaattgaagactcatttgacaagatacaagaacaa 6295478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 440
Target Start/End: Complemental strand, 36319855 - 36319675
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgct 357  Q
    |||||||||||||||||||||||  ||| |||||||||| |||  || | |||||||||||| ||||| | |||| ||| ||| ||||||| ||| ||||    
T  36319855 tttcaagtgcaaagtaaaagaacggattagagagaaaaaaaaa--aagattccatgaatgtttaaaagaaagaaaaagtagaatactcgttggaactgct 36319758  T
Q  358 gatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    ||||  || ||||||| | ||| |||||||| || | ||||| ||||||||||||||| | |||||||| ||| |||||||||    
T  36319757 gatgagaggtgaagagagagaaatagttgaaaactcatttgataagatacaagaacaagagcaagatgacaattaagaagaag 36319675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 10430590 - 10430516
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| || | ||||||||||||    
T  10430590 attactcttatcttttttaataaaactaattaatgctatatatttgcaaaactcaagtttgtatttttaaacaaa 10430516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 52415029 - 52415107
Alignment:
Q  150 aaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatga-tttatgaagagttaaa 227  Q
    ||| |||||||||||||| ||||||||| ||||||| |||||| |||||||| ||||||||| ||||||||||||||||    
T  52415029 aaacaaaatttgtttcttcttatcttcagatttaaacaaaattttgttacatgtaataatgattttatgaagagttaaa 52415107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 280
Target Start/End: Original strand, 19269821 - 19269959
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatg 244  Q
    ||||||| ||| |||| ||||||||||||||| ||| ||| ||| || | |||| |||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  19269821 tttaaaacaaagtttgcttcttgttatcttcaaattgaaacaaattttttttacctataataatggtttcatgaatagttaaaattctataaataagatg 19269920  T
Q  245 ---aataattgctaaattttcaagtgcaaagtaaaagaa 280  Q
       | |||||| |||| ||||||||||| ||| ||||||    
T  19269921 agtagtaattgttaaaatttcaagtgcatagttaaagaa 19269959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 11238313 - 11238238
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||| |||||| ||||| ||||||||||||||||| |||| ||||| |||||||||  ||||||||||||||||||    
T  11238313 attattcttatatttttcaataaaactaattaatgatatatatttggaaaactaaaatttatttttttaaacaaag 11238238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 13254827 - 13254752
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatt-tttttaaacaaa 133  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| | |||||||| ||||| ||||||||||||    
T  13254827 attactcttatctttttcaataaaactaattaatgctatctatttggagaactaaagtttattatttttaaacaaa 13254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 3901039 - 3901115
Alignment:
Q  56 ttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||| || |||||| ||||||||    
T  3901039 ttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaag-tttttttttaaaacaaag 3901115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 50488831 - 50488755
Alignment:
Q  56 ttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||||||||||||||||| || |||||||||||||| |||| |||||||||||||||| || |||||| ||||||||    
T  50488831 ttgattactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaag-tttttttttaaaacaaag 50488755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 31623102 - 31623002
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||| ||||||| | ||||||| ||| || |||||  ||||||||| |||  ||||||||||||||||  ||||||||||||    
T  31623102 tttaaaacaaaatttgtttcttcttatctttaaatttaaacaaatttttgttaactataataataattccatgaagagttaaaattttataaataagatg 31623003  T
Q  245 a 245  Q
    |    
T  31623002 a 31623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 1674837 - 1674770
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||| |||||| ||||| ||||||||||||||||| |||| |||||||||||||||| || |||||||    
T  1674837 attattcttatatttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgttttttt 1674770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 36320037 - 36319970
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| |||||||| | || |||||||    
T  36320037 attactcttatctttttcaataaaactaattaatgctatctatttggaaaactaatgtttgttttttt 36319970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 6295814 - 6295761
Alignment:
Q  60 ttactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaa 113  Q
    ||||| |||||||||| |||||||||||||||||||||  ||||||||||||||    
T  6295814 ttacttttatctttttaaataaaactaattaatgctatctatttgaaaaactaa 6295761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 282
Target Start/End: Original strand, 39386790 - 39386915
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaat---aattgc 253  Q
    |||||||||||||||||||| ||||||| |||||| |||||||   || | ||||| || | ||||||||||||| |||||||||||||||   |||||     
T  39386790 tttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aacactgattctaag-agagttaaaattctataaataagatgaataacaattgt 39386885  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca 282  Q
    | ||| |||||| |||||||||||||||||    
T  39386886 tgaatatttcaaatgcaaagtaaaagaaca 39386915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 2655733 - 2655789
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||||    
T  2655733 attactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaag 2655789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 10101738 - 10101672
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||||||||| ||||||||||| |||||||||  ||||| |||||||||| || |||||||    
T  10101738 attactcttatctttttcaataaaactaa-taatgctatctatttggaaaactaaagtttgttttttt 10101672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 43021153 - 43021208
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaa 114  Q
    ||||||||||| ||| | ||||||||||||||||| |||| |||||||||||||||    
T  43021153 attactcttatatttatcaataaaactaattaatgttatatatttgaaaaactaaa 43021208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 415
Target Start/End: Original strand, 52957490 - 52957587
Alignment:
Q  318 ttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    ||||||| || ||||||||||||||||| || |||| | |||||| || |||||| |  ||| ||||||||||| | |||||||||||| || |||||    
T  52957490 ttcaaaaagaagaaagagtggaagactcattggaatggttgatgggaggtgaagatgaagaaatagttgaagactcctttgacaagatagaataacaa 52957587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 788260 - 788209
Alignment:
Q  148 taaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttac 199  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||||| ||||||    
T  788260 taaaacaaaatttatttcttgttatcttcaaatttaaacaaaattttgttac 788209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 1394828 - 1394745
Alignment:
Q  162 tttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg 244  Q
    |||||||||||||| | ||||||| |||||| |||||| |||| |||| | || ||||| ||||||||||| || |||||||||    
T  1394828 tttcttgttatcttaaaatttaaacaaaattttgttacctatactaatagtttcatgaatagttaaaattctatgaataagatg 1394745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 185
Target Start/End: Original strand, 2655801 - 2655840
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaa 185  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  2655801 tttaaaacaaaatttgtttcttgttatcttcaaatttaaa 2655840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 6295742 - 6295699
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgtt 197  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||    
T  6295742 aaaatttgtttcttgttatcttcaaatttaaacaaaattttgtt 6295699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 185
Target Start/End: Original strand, 32769089 - 32769120
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaa 185  Q
    ||||||||||||||||||||||||||||||||    
T  32769089 aaaatttgtttcttgttatcttcatatttaaa 32769120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 788341 - 788279
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    ||||| ||||||||||||||||| |||| ||||| |||| ||||| || |||||| |||||||    
T  788341 tttttcaataaaactaattaatgttatatatttggaaaaataaagtttgttttttaaaacaaa 788279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 35275032 - 35274966
Alignment:
Q  180 tttaaataaaattct-gttacatataataatgattt-atgaagagttaaaattcaataaataagatg 244  Q
    ||||||||||| ||| |||||||||||||||| ||| || |||||||||||| | ||||||||||||    
T  35275032 tttaaataaaaatcttgttacatataataatggtttcataaagagttaaaatgctataaataagatg 35274966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 37710460 - 37710398
Alignment:
Q  150 aaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgat 212  Q
    ||||||| ||||||| ||| |||||||| ||||||| |||||| | |||| ||||||||||||    
T  37710460 aaataaagtttgttttttggtatcttcaaatttaaacaaaattttcttacctataataatgat 37710398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 133
Target Start/End: Original strand, 32186544 - 32186605
Alignment:
Q  72 tttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||||||||||||| |||  ||||| |||| | ||| ||||||||| |||||||    
T  32186544 tttttaataaaactaattaatgttatgtatttgcaaaattcaagtttattttttgaaacaaa 32186605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 39157132 - 39157180
Alignment:
Q  77 aataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    |||| |||||||||||| |||| |||||||||||||||| || ||||||    
T  39157132 aatagaactaattaatgttatatatttgaaaaactaaagtttgtttttt 39157180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 3e-71; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 180 - 426
Target Start/End: Original strand, 39427507 - 39427754
Alignment:
Q  180 tttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattgctaaat-tttcaagtgcaaagtaaaa 277  Q
    |||||| |||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||     
T  39427507 tttaaacaaaattttgttacatata-taatgattttatgaagagttaaaattctataaataagatgaataattgttaaaaatttcaagtgcaaagtaaat 39427605  T
Q  278 gaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagaggggg 377  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||| || ||| |||||||||||| ||||||||| |    
T  39427606 gaacaatttgagagaaaaataaataaaaactccatgaatgttcaaaagaaagaaatagtggaagactcattggaactgctgatggaaggtgaagagggag 39427705  T
Q  378 aagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatga 426  Q
    |||||||| ||||  |||||||||| ||| || || |||||||||||||    
T  39427706 aagtagttaaagattcgtttgacaatataaaaaaaaaaaaacaagatga 39427754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 254 - 440
Target Start/End: Original strand, 29664480 - 29664666
Alignment:
Q  254 taaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaat 353  Q
    |||| |||||||| ||||||||||    || |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||||||     
T  29664480 taaaatttcaagtacaaagtaaaaattgaaattgagagaaaaacaaataaaaactccatgaatgttcaaaaagaaaaaagagtggaagactcattagaac 29664579  T
Q  354 tgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    |||||||||||| ||||||| | ||||||||||||||  |||||||||| |||||| |||||||||||||||| |||||| ||||||    
T  29664580 tgctgatggaaggtgaagagagagaagtagttgaagattcgtttgacaatatacaaaaacaaaaacaagatgacaatgaaaaagaag 29664666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 158 - 440
Target Start/End: Original strand, 4567410 - 4567696
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgc 253  Q
    |||||||||| ||||||||| ||||||| |||||| |||||||   || |||| ||  | ||||||||||||||| ||||||||||||| ||   ||||     
T  4567410 tttgtttcttcttatcttcaaatttaaacaaaattttgttaca---aacaatggttccaagaagagttaaaattctataaataagatgagtagcaattgt 4567506  T
Q  254 taaat-tttcaagtgcaaagtaaaa-gaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgtta 349  Q
    ||||  ||||||||| ||||||||| ||||| ||||||||||| || |||||||| |||||||||||||||||||||| ||||  ||||||||||||||     
T  4567507 taaaaatttcaagtgaaaagtaaaaagaacatatttgagagaataa-aaataaaatactccatgaatgttcaaaaggaagaaaatgtggaagactcgttg 4567605  T
Q  350 gaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    ||||||||||||  || ||||||||| | | ||||||||||| |  ||||||| ||||| |||||| |||||||||| |||||||||||||    
T  4567606 gaattgctgatgagaggtgaagagggagcaatagttgaagactcaattgacaaaatacatgaacaagaacaagatgacaatgaagaagaag 4567696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 39427368 - 39427487
Alignment:
Q  9 cgatttgtcaattatactct--gtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaact-aattaatgctatacatttga 105  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||     
T  39427368 cgatttgtcaattatactctttgtcaattactcgtatctttttctttgtttggttactcttatcttttttaataaaactaaattaatgctatatatttgg 39427467  T
Q  106 aaaactaaagcttatttttt 125  Q
    |||||||||| || ||||||    
T  39427468 aaaactaaagtttgtttttt 39427487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 59 - 248
Target Start/End: Original strand, 15643354 - 15643548
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatt-tttttaaacaaagnnnnnnnnatgt---ttaaaata 154  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||| || || |||||||||||||         | |   |||||| |    
T  15643354 attactcttatttttttcaataaaactaattaatgctatatatttggaaaactaaagttttttatttttaaacaaagtttgtttgttttgttttaaaaca 15643453  T
Q  155 aaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatgaata 248  Q
    |||||||||| |||||||||||| ||||||| |||||| |||||  ||| |||||| ||  ||||||||||||||||| ||||||||||||||||    
T  15643454 aaatttgtttattgttatcttcaaatttaaacaaaattttgttagctatcataatggttacatgaagagttaaaattctataaataagatgaata 15643548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 420
Target Start/End: Original strand, 37124374 - 37124534
Alignment:
Q  259 tttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    ||||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||| ||| |||| ||||  |||||||||  ||||||    
T  37124374 tttcaagtgcaaagtaaaagaacaaatttgagagaagaa-aaataaaagactccatgaatgttcaaatggaagaaaaagtg--agactcgttgaaattgc 37124470  T
Q  357 tgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaaca 420  Q
    |||||  || |||||| || | | |||| |||||| | ||||||||||||||||||||| ||||    
T  37124471 tgatgagaggtgaagatggagcaatagtggaagactcatttgacaagatacaagaacaataaca 37124534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 147 - 353
Target Start/End: Complemental strand, 35793110 - 35792901
Alignment:
Q  147 ttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatga 245  Q
    |||||| ||| |||||||||||||||||||| ||||||| |||||| ||| |||   || |||| || || ||| ||||||||||| |||||||||||||    
T  35793110 ttaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaattttgtaaca---aacaatggttctaagaaaagttaaaattctataaataagatga 35793014  T
Q  246 ata---attgctaaatt-ttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtgga 339  Q
     ||   |||| |||| | |||||||| ||||||||||||||  |||||||||| || |||||||| |||||||||||||||||||| | |||| |||| |    
T  35793013 gtagaaattgttaaaatattcaagtgtaaagtaaaagaacatgtttgagagaagaa-aaataaaagactccatgaatgttcaaaagaaagaaaaagtgaa 35792915  T
Q  340 agactcgttagaat 353  Q
    ||||||||| ||||    
T  35792914 agactcgttggaat 35792901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 2798624 - 2798699
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| || | |||||||||||||    
T  2798624 attactcttatctttttcaataaaactaattaatgctatatatttgaaaaactaaagtttgtatttttaaacaaag 2798699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 146 - 415
Target Start/End: Original strand, 12394235 - 12394500
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||||| ||| |||||||||||||||| ||| ||||||| |||||| ||||| | | |||| |  |||| ||||| || |||||  |||||||||||||    
T  12394235 tttaaaacaaagtttgtttcttgttatcatcaaatttaaacaaaattttgttataaacaatagt--tttaagaagatttcaaattttataaataagatga 12394332  T
Q  246 ataattgctaaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaa----ctccatgaatgttcaaaaggaggaaagagtggaa 340  Q
     ||     | |||| | | ||||||||||||| |||| |||||||||||  | ||||||||     |||||||||||||||||||||  |||||||||||    
T  12394333 gta-----tcaattgtta-gtgcaaagtaaaaaaacagatttgagagaagga-aaataaaagactcctccatgaatgttcaaaaggaaaaaagagtggaa 12394425  T
Q  341 gactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    |||||  |  | |||||||||  || ||||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  12394426 gactcaatgaagttgctgatgagagttgaagagggagaaatagttgaagactcatttgacaagatacaagaacaa 12394500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 415
Target Start/End: Complemental strand, 10534918 - 10534760
Alignment:
Q  260 ttcaagtgcaaagtaaaagaaca-atttgagagaa-aaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    ||||||||||| |||||| |||| |||||||| || ||| |||||||| ||||||||||| ||||||| || |||| ||||||||||||||| |||||||    
T  10534918 ttcaagtgcaatgtaaaaaaacagatttgagaaaagaaaaaaataaaagactccatgaatattcaaaaagaagaaaaagtggaagactcgttggaattgc 10534819  T
Q  357 tgatg-gaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    ||||| |||| ||||||||| | | ||||| || || | |||||| ||||||||||||||    
T  10534818 tgatgagaag-tgaagagggagcaatagttaaatactcatttgaccagatacaagaacaa 10534760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 449
Target Start/End: Original strand, 16196987 - 16197172
Alignment:
Q  260 ttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgct 357  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||  ||| ||| ||| ||||||| |||||| |    
T  16196987 ttcaagtgcaaagtaaaagaacatatttgagagaagaa-aaataaaagactccatgaatattcaaaaggaataaatagttgaatactcgttggaattgtt 16197085  T
Q  358 gatg-gaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcat 449  Q
    |||| |  | |||||||||   | ||| ||||||| | ||| | ||||||||||      |||||||||| ||||||||||||||||||||||    
T  16197086 gatgagggggtgaagagggaacaatagctgaagactcatttcataagatacaag------aacaagatgacaatgaagaagaagaagtttcat 16197172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 4962933 - 4962833
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| |||||| ||| ||||| | || ||||||||||||||||| |||||||| |||    
T  4962933 tttaaaacaaaatttgtttattgttatcttcaaatttaaacaaaattttgttacctatgataatagtttcatgaagagttaaaattctataaataacatg 4962834  T
Q  245 a 245  Q
    |    
T  4962833 a 4962833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 14771405 - 14771308
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatgaataat 250  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| |||| ||||| | |  ||||||||||||||||| |||||||| |||| ||||    
T  14771405 aaaatttgtttcttgttatcttcaaatttaaacaaaattttgttaaatatgataatagttccatgaagagttaaaattctataaataacatgagtaat 14771308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 15221857 - 15221760
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatgaataat 250  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| |||| ||||| | |  ||||||||||||||||| |||||||| |||| ||||    
T  15221857 aaaatttgtttcttgttatcttcaaatttaaacaaaattttgttaaatatgataatagttccatgaagagttaaaattctataaataacatgagtaat 15221760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 2273580 - 2273505
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||| || |||| | ||||||||    
T  2273580 attactcttatctttttcaataaaacttattaatgctatatatttggaaaactaaagtttgttttatgaaacaaag 2273505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 10026284 - 10026218
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatg--ctatacatttgaaaaactaaagcttatttt 123  Q
    ||||||||||||||||| |||||||||||||||||   |||| ||||||||||||||||||||||||    
T  10026284 attactcttatctttttcaataaaactaattaatgttatatatatttgaaaaactaaagcttatttt 10026218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 39430669 - 39430594
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||| |||||| ||||| |||||||||||||| ||||||| |||||||||||||||| || |||| ||||||||||    
T  39430669 attattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaagtttgttttattaaacaaag 39430594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 39599758 - 39599685
Alignment:
Q  59 attactcttatctttttta-ataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    |||||||||||||||    
T  39599758 attactcttatcttttttcgataaaactaattaatgctatatatttgaaaaactaaag---ttttttttaaacaaag 39599685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 28226571 - 28226623
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  28226571 ctcttatctttttcaataaaactaattaatgttatatatttgaaaaactaaag 28226623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 36412911 - 36412830
Alignment:
Q  50 ctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||||| ||||||||||||||||| || |||||||||||||| |||| |||||||||||||||| || |||||| ||||||||    
T  36412911 ctttgttt-attactcttatctttttcaa-aaaactaattaatgttataaatttgaaaaactaaag-tttttttttaaaacaaag 36412830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 8614833 - 8614774
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataa 205  Q
    ||||||| |||||||||||||||||||||||| ||||||| |||||| ||||||| ||||    
T  8614833 tttaaaacaaaatttgtttcttgttatcttcaaatttaaacaaaattttgttacaaataa 8614774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 7809263 - 7809189
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||| |||||||||| |||||||||||||||| ||||  ||| | |||||||||| ||||||||| |||||||    
T  7809263 attacttttatctttttaaataaaactaattaatactatgtattaggaaaactaaagtttattttttaaaacaaa 7809189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 24394291 - 24394218
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||| ||||| ||||||||||| ||||| |||| ||||| |||||||||| || | |||||||||||||    
T  24394291 tactcttatatttttgaataaaactaactaatgatatatatttggaaaactaaagtttgtatttttaaacaaag 24394218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 4963004 - 4962948
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| |||||| ||||| |||||||||||||| ||||||| ||||||||||||||||    
T  4963004 attattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaag 4962948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 37124193 - 37124249
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| ||||||||||||||||||| |  ||||| ||||||||||    
T  37124193 attactcttatctttttcaataaaactaattaatgctctctatttggaaaactaaag 37124249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 345
Target Start/End: Complemental strand, 3835635 - 3835447
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaa-ttcaataaataagatgaata---attgc 253  Q
    |||||||||||||||||||| ||||||| |||||| |||||||   || | || ||    ||||||||||| ||| ||||||||| ||||||   ||||     
T  3835635 tttgtttcttgttatcttcaaatttaaacaaaattttgttaca---aacactggttct--aagagttaaaaattctataaataagttgaatagcaattgt 3835541  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
    ||||  ||||||||  ||||| |||||||| ||||||||||| || |||||||| ||| ||||||||||||||| || |||| ||||||||||||    
T  3835540 taaaaatttcaagtctaaagttaaagaacagatttgagagaagaa-aaataaaagacttcatgaatgttcaaaatgaagaaaaagtggaagactc 3835447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 6654504 - 6654441
Alignment:
Q  181 ttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagat 243  Q
    |||||||||||| |||||| | |||| ||||||| ||||||||||||||||||||| |||||||    
T  6654504 ttaaataaaattttgttacttgtaatgatgatttcatgaagagttaaaattcaatagataagat 6654441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 27723309 - 27723384
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||||| |||||||||| | |||||||||||||||||||   ||||||||| ||||| || |||| ||||||||||    
T  27723309 attacttttatctttttcagtaaaactaattaatgctatctgtttgaaaaattaaagtttgttttattaaacaaag 27723384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 240
Target Start/End: Complemental strand, 46672014 - 46671919
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataa 240  Q
    ||||||| ||||||| |||||||||||||||| ||||||| |||  | |||||| | | ||||| |||| ||||||||||||||||  ||||||||    
T  46672014 tttaaaacaaaatttatttcttgttatcttcaaatttaaacaaatatttgttacctgtgataataatttcatgaagagttaaaattttataaataa 46671919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 4678434 - 4678496
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    ||||| ||||||||||||||||| |||| ||||| ||||||||||  | ||||||||||||||    
T  4678434 tttttcaataaaactaattaatgttatatatttggaaaactaaagtatgtttttttaaacaaa 4678496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 8614897 - 8614828
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa 129  Q
    ||||||||||| |||||||||||||||||||| || |||  |||||||||||||||  || ||||||||||    
T  8614897 attactcttat-ttttttaataaaactaattattgttatctatttgaaaaactaaatgttttttttttaaa 8614828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 4567337 - 4567409
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    |||| |||||||||| |||||||||||||||||||||  | ||| |||||||||| || ||| |||||||||||    
T  4567337 tacttttatctttttcaataaaactaattaatgctatctagttggaaaactaaag-ttttttctttaaacaaag 4567409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 214 - 282
Target Start/End: Original strand, 17269666 - 17269739
Alignment:
Q  214 tatgaagagttaaaattcaataaataagatgaataattgct-----aaattttcaagtgcaaagtaaaagaaca 282  Q
    |||||| ||||||||||| |||||||||||||||||||  |     ||| ||||||||||||||||||||||||    
T  17269666 tatgaatagttaaaattctataaataagatgaataattaattgttaaaaatttcaagtgcaaagtaaaagaaca 17269739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 10535072 - 10535004
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaaca 131  Q
    ||||||||||||| |||||||||||||||||  ||  |||||||||| ||||| || |||||| |||||    
T  10535072 ctcttatctttttcaataaaactaattaatgtaatctatttgaaaaattaaagttttttttttaaaaca 10535004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 16196804 - 16196880
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttt-ttaaacaaag 134  Q
    ||||||||||||||||| ||||||||||||| ||| |||  | ||| |||||||||| || ||||| ||||||||||    
T  16196804 attactcttatctttttcaataaaactaattgatgttatctaattggaaaactaaagtttgtttttattaaacaaag 16196880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 39432618 - 39432674
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattt 122  Q
    |||| ||||| ||||||||| |||| ||||||| |||||||||||||||| ||||||    
T  39432618 ttatatttttcaataaaacttattagtgctatatatttgaaaaactaaagtttattt 39432674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 43368804 - 43368860
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| |||||||||| ||||||||||||||| | |||| ||||| ||||||||||    
T  43368804 attacttttatctttttaaataaaactaattaaagttatatatttggaaaactaaag 43368860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 24394203 - 24394164
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaa 185  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  24394203 tttaaaacaaaatttatttcttgttatcttcatatttaaa 24394164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 27229673 - 27229615
Alignment:
Q  77 aataaaactaattaatgctatacatttgaaaaactaaagcttatt-tttttaaacaaag 134  Q
    |||||||||||||||||||||  ||||| |||||||||| || || |||||||||||||    
T  27229673 aataaaactaattaatgctatcaatttggaaaactaaagtttgttatttttaaacaaag 27229615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 35793178 - 35793112
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    ||||||||||||||||| ||||||||||||||||| | |  ||||| |||||||| | || ||||||    
T  35793178 attactcttatctttttcaataaaactaattaatgttgtctatttggaaaactaatgtttttttttt 35793112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 25290710 - 25290763
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttac 199  Q
    ||||||| |||||||||||| ||||||| ||| ||||||| |||||| ||||||    
T  25290710 tttaaaacaaaatttgtttcctgttatcatcaaatttaaacaaaattttgttac 25290763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 25290639 - 25290695
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| |||||| ||||| |||||||||||||||||   || ||||||||||||||||    
T  25290639 attattcttatatttttcaataaaactaattaatgtcgtatatttgaaaaactaaag 25290695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 158 - 450
Target Start/End: Original strand, 49263089 - 49263386
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatgaata---attgct 254  Q
    |||||||||||| ||||||| ||||||| |||||| ||||| | | ||||  | |  | ||||  ||||||||| ||||||||||||| ||   |||| |    
T  49263089 tttgtttcttgtcatcttcaaatttaaacaaaattttgttataaacaatatagttacaagaagtattaaaattctataaataagatgagtagcaattgtt 49263188  T
Q  255 aaat-tttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttaga 351  Q
    |||  ||||||||| ||||||||||||||| |||||||||| || |||||||| |||||||||||||||||| |||  ||| ||||||||||||||| ||    
T  49263189 aaaaatttcaagtgtaaagtaaaagaacaaatttgagagaagaa-aaataaaagactccatgaatgttcaaatggaaaaaaaagtggaagactcgttgga 49263287  T
Q  352 attgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||||||  || ||||||||| | | ||||||||||| | |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||    
T  49263288 attgctgatgagaggtgaagagggagcaatagttgaagactcatttgacaagaaacaagaacaagaacaagatgacaatgaagaagaagaagtttcatc 49263386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 158 - 440
Target Start/End: Complemental strand, 24074125 - 24073840
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgc 253  Q
    ||||||| |||| ||||||| ||||||| |||||| |||||||   || |||| ||| | ||||||||||||||| | ||||||||||| |||   |||     
T  24074125 tttgttttttgtcatcttcaaatttaaacaaaattttgttaca---aacaatggtttcaagaagagttaaaattctagaaataagatgagtaacaattgt 24074029  T
Q  254 taaattt-tcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||  | ||||||||||||||||||||||| |||||||||| || |||||||| |||||||||||||||||||||| | || | ||||||||||||| |    
T  24074028 taaaaatctcaagtgcaaagtaaaagaacaaatttgagagaagaa-aaataaaagactccatgaatgttcaaaaggaagtaaaaatggaagactcgttgg 24073930  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaag 440  Q
    ||| |||||||  || ||||||||| | | ||||| ||||| | ||||||||||||||||||||| | |||||||| || ||||||||||    
T  24073929 aatagctgatgagaggtgaagagggtgcaatagttaaagactcatttgacaagatacaagaacaagatcaagatgacaacgaagaagaag 24073840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 33889577 - 33889677
Alignment:
Q  16 tcaattatactctgt--cagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaa 113  Q
    ||||||||||||| |  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  33889577 tcaattatactctttatcaattactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatatatttggaaaactaa 33889676  T
Q  114 a 114  Q
    |    
T  33889677 a 33889677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 28 - 185
Target Start/End: Original strand, 41502528 - 41502681
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttta 127  Q
    ||||| |||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| || ||||||||    
T  41502528 tgtcaattactcatatttttttctttgtttggttactcttatcttttttaataaaattaattaatgttatatatttgaaaaactaaagttttttttttta 41502627  T
Q  128 aacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgttatcttcatatttaaa 185  Q
    ||| |||         | ||||||| |||||||||||||||||||||||| |||||||    
T  41502628 aactaagttttt----tttttaaaacaaaatttgtttcttgttatcttcagatttaaa 41502681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 158 - 415
Target Start/End: Complemental strand, 54982742 - 54982482
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgc 253  Q
    |||||||||||||||||||| ||||| | |||||| || ||||   || |||| ||| | ||||||||||||||| ||||||||||||| |||   |||     
T  54982742 tttgtttcttgttatcttcaaatttatacaaaattttgctaca---aacaatggtttcaagaagagttaaaattctataaataagatgagtaacaattgt 54982646  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||  |||||| |||||||||||| |||| ||||||||||| || |||||||| |||| ||||||||| ||||||| |||| | ||||||||||||| |    
T  54982645 taaaaatttcaattgcaaagtaaaaaaacagatttgagagaagaa-aaataaaagactctatgaatgtttaaaaggaagaaaaaatggaagactcgttgg 54982547  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    | |||||||||  || ||||||||| | | ||| ||||||| | |||||||| ||||||||||||    
T  54982546 atttgctgatgagaggtgaagagggagcaatagctgaagactcatttgacaatatacaagaacaa 54982482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 668126 - 668025
Alignment:
Q  28 tgtcagttactcgtatctttttctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttta 127  Q
    ||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| || ||||||||    
T  668126 tgtcaattactcatatctttttctttgtttggttactcttatctttttaaataaaactaattaatgttatatatttggaaaactaaagtttgttttttta 668027  T
Q  128 aa 129  Q
    ||    
T  668026 aa 668025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 263 - 443
Target Start/End: Original strand, 50721108 - 50721283
Alignment:
Q  263 aagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgat 360  Q
    |||||||||||||||||||| ||||||||||| || |||||||| ||||| ||||||||||||| || |||| |||||||||||||||  ||||||||||    
T  50721108 aagtgcaaagtaaaagaacagatttgagagaagaa-aaataaaagactccgtgaatgttcaaaaagaagaaaaagtggaagactcgttgaaattgctgat 50721206  T
Q  361 ggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaag 443  Q
    |  |  ||||||||  | | ||||||||||| | ||||||||||||||||      |||||||||| ||||||||||||||||    
T  50721207 gagacgtgaagaggaagcaatagttgaagactcatttgacaagatacaag------aacaagatgacaatgaagaagaagaag 50721283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 2492864 - 2492934
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa 129  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  2492864 attactcttatcttttttaataaaactaattaatgctatctatttgaaaaactaaagtttatttttttaaa 2492934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 450
Target Start/End: Complemental strand, 9089497 - 9089315
Alignment:
Q  260 ttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctg 358  Q
    |||||||||||||||||||| || |||||| ||||||| ||    |||||||| |||||||||||| || |||| |||||| ||||||||  ||||||||    
T  9089497 ttcaagtgcaaagtaaaagatcagatttgaaagaaaaataag---aaactccaagaatgttcaaaaagaagaaaaagtggaggactcgttgaaattgctg 9089401  T
Q  359 atggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    |||  || ||||||||  | | ||||||||||| | |||||||||||||||||      ||||||||| ||||||||||| |||||||||||    
T  9089400 atgagaggtgaagaggaagcaatagttgaagactcatttgacaagatacaaga------acaagatgacaatgaagaagacgaagtttcatc 9089315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 37371472 - 37371283
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgt---ttaaaataa 155  Q
    |||| |||||| ||||| |||||||||| |||||| |||| ||||||||||| |||| || |||||||||||||||         | |   |||||| ||    
T  37371472 attattcttatatttttcaataaaacta-ttaatgatatatatttgaaaaaccaaagtttgtttttttaaacaaagtttatttgttttgttttaaaacaa 37371374  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||| |||||||||||||||| |||||||||||||| |||||| | | ||||| | | |||||| ||||||||||| |||||||| ||||    
T  37371373 aatttctttcttgttatcttcaaatttaaataaaattttgttacttgtgataatagttctatgaaaagttaaaattctataaataacatga 37371283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 169 - 324
Target Start/End: Complemental strand, 38044869 - 38044711
Alignment:
Q  169 ttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatgaata---attgctaaat-tttcaa 264  Q
    ||||||||| |||||||||||||| ||||||| | |||  |  |||| ||||||||||||||  |||||||||||| |||   |||| ||||  ||||||    
T  38044869 ttatcttcaaatttaaataaaattttgttacaaacaatggt--tttacgaagagttaaaattatataaataagatggatagaaattgttaaaaatttcaa 38044772  T
Q  265 gtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaa 324  Q
    ||||||||||||| |||| ||||||||||| || |||||||| |||||||||||||||||||    
T  38044771 gtgcaaagtaaaaaaacagatttgagagaagaa-aaataaaagactccatgaatgttcaaaa 38044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 9089682 - 9089615
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||| |||||||    
T  9089682 attactcttatctttttcaataaaactaattaatgctatctatttgaaaaattaaagctttttttttt 9089615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 46195767 - 46195905
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    |||||| |||||||||| | ||||||||||||||| |||  |||||||||| ||||| || |||||||||||||||         | |||||||  || |    
T  46195767 attacttttatctttttcagtaaaactaattaatgttatcaatttgaaaaattaaagtttgtttttttaaacaaagtttgtttgttttttaaaaccaatt 46195866  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgtt 197  Q
    ||||||||||||||||||| ||||||| |||||| ||||    
T  46195867 ttgtttcttgttatcttcaaatttaaacaaaattttgtt 46195905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 50720920 - 50720997
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatt--tttttaaacaaag 134  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||| || ||  |||||||||||||    
T  50720920 attactcttatctttttcaataaaactaattaatgctatctatttgaaaaacaaaagtttgtttatttttaaacaaag 50720997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 19443637 - 19443452
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag-nnnnnnnnatgtttaaaataaaa 157  Q
    |||||| |||||||||||| ||||||||| |||| ||||  |||||||||| ||||| || |||||||||||| ||          | ||| ||| ||||    
T  19443637 attacttttatcttttttagtaaaactaagtaatactatctatttgaaaaattaaagtttgtttttttaaacatagtttgtttgttttttttaaacaaaa 19443538  T
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatga 245  Q
    |||||||||||||||||||| ||||||| |||||| | || || | |  || | || | ||||||||||||||| |||||||||||||    
T  19443537 tttgtttcttgttatcttcaaatttaaacaaaattttattccaaaca--aaggtttcaagaagagttaaaattctataaataagatga 19443452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 405
Target Start/End: Complemental strand, 38044664 - 38044572
Alignment:
Q  313 gaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagat 405  Q
    |||||||||||| || |||| ||||||||||||||||||||||| ||||  || |||||| || | | ||||||||||| | |||||||||||    
T  38044664 gaatgttcaaaatgaagaaaaagtggaagactcgttagaattgccgatgagaggtgaagatggagcaatagttgaagactcatttgacaagat 38044572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 38840484 - 38840428
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||    
T  38840484 attacttttatcttttttagtaaaactaattaatgctatctatttgaaaaactaaag 38840428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 245
Target Start/End: Original strand, 30913646 - 30913733
Alignment:
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||||||||||||||| | ||||||| ||| || |||||| ||||||||| | || ||||| ||||||||||| |||||||||||||    
T  30913646 ttgtttcttgttatcttaaaatttaaacaaatttttgttacctataataatagtttcatgaatagttaaaattctataaataagatga 30913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 197
Target Start/End: Complemental strand, 1821655 - 1821520
Alignment:
Q  60 ttactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatt 159  Q
    ||||| ||| |||||| | ||||||||||||||| |||  ||||| |||| ||||| ||||||||||||||||||         | ||| ||| ||||||    
T  1821655 ttacttttacctttttcagtaaaactaattaatgatatctatttggaaaattaaagtttatttttttaaacaaagtttgttt--ttttttaaacaaaatt 1821558  T
Q  160 tgtttcttgttatcttcatatttaaataaaattctgtt 197  Q
    ||||| |||||||||||| ||||||| |||||| ||||    
T  1821557 tgtttattgttatcttcaaatttaaacaaaattttgtt 1821520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 25493846 - 25493911
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttt 124  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||| |||||||||| || |||||    
T  25493846 attactcttatctttttcaataaaactaattaatgttatctatttggaaaactaaagtttgttttt 25493911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 324
Target Start/End: Complemental strand, 37209981 - 37209802
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| ||| |||||||||||||||||||| ||||||| ||||||   |||||   || |||||||  | ||| | ||||||||| ||||||||||||    
T  37209981 tttaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaatttaattaca---aacaatgattccaagaaaatttaaaattctataaataagatg 37209885  T
Q  245 aat---aattgctaaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaa 324  Q
    | |   |||||  ||| ||||||  | |||||||||||||| ||||||||||| || |||||||| |||||||||||||||||||    
T  37209884 agtagcaattg-aaaaatttcaaaggtaaagtaaaagaacagatttgagagaagaa-aaataaaagactccatgaatgttcaaaa 37209802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 38434303 - 38434247
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||| |||||| ||||| |||||||||||||| ||||||| ||||||||||||||||    
T  38434303 attattcttatatttttcaataaaactaattagtgctatatatttgaaaaactaaag 38434247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 243
Target Start/End: Complemental strand, 38840415 - 38840320
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagat 243  Q
    ||||||| ||| |||||||||||||||||||| ||||||| |||||| |||| ||   || |||| ||| | ||||||||||||||| |||||||||||    
T  38840415 tttaaaacaaagtttgtttcttgttatcttcaaatttaaacaaaattttgttcca---aacaatggtttcaagaagagttaaaattctataaataagat 38840320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 45635520 - 45635464
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||||    
T  45635520 attactcttatatttttcaataaaactaattaatgttatatatttggaaaactaaag 45635464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 243
Target Start/End: Complemental strand, 53370377 - 53370277
Alignment:
Q  144 tgtttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttat-gaagagttaaaattcaataaataaga 242  Q
    ||||||||| ||| |||||||||| ||||||| | ||||||| |||| | |||||| |||||||||| ||  | ||| ||||||||||| ||||||||||    
T  53370377 tgtttaaaacaaagtttgtttcttattatcttaaaatttaaacaaaagtttgttacctataataatggttacttgaatagttaaaattctataaataaga 53370278  T
Q  243 t 243  Q
    |    
T  53370277 t 53370277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 6949112 - 6949150
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctat 97  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  6949112 attactcttatctttttcaataaaactaattaatgctat 6949150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 25490483 - 25490549
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    |||||||||||| |||| ||||||| ||||||||| |||| ||||| |||||||||| || ||||||    
T  25490483 attactcttatcattttcaataaaaataattaatgttatatatttggaaaactaaagtttgtttttt 25490549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 30912713 - 30912806
Alignment:
Q  153 taaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga 245  Q
    |||| |||||||||||||||||| | ||||||| |||  | |||||| || ||||||| ||| ||||| ||||||||||| || ||||||||||    
T  30912713 taaagtttgtttcttgttatcttaaaatttaaacaaatatttgttacctacaataatggtttcatgaatagttaaaattctatcaataagatga 30912806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 23529535 - 23529591
Alignment:
Q  59 attactcttatctttttt-aataaaactaattaatgctatacatttgaaaaactaaa 114  Q
    |||||| ||||||||||| |||||||||||||||||||||  ||||| |||||||||    
T  23529535 attacttttatcttttttcaataaaactaattaatgctatttatttggaaaactaaa 23529591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 24538372 - 24538186
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnat---gtttaaaataa 155  Q
    |||| |||||| ||||| |||||||||||||| || |||| ||||| |||||||||| ||  ||||||||||||||         |    ||||||| ||    
T  24538372 attattcttatatttttcaataaaactaattagtgttatatatttggaaaactaaag-tttgttttttaaacaaagtttgtttgttttgttttaaaacaa 24538274  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatttatgaagagttaaaattcaataaataagatga 245  Q
    |||||||||||||||||||||  ||| ||| |||||| |||||| ||| |||||     ||||||| ||||||||| |||||||| ||||    
T  24538273 aatttgtttcttgttatcttcgaattcaaacaaaattttgttacctatgataat--cccatgaagacttaaaattctataaataacatga 24538186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 37210045 - 37209985
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||||||||| |||||||||||| ||||||||  ||||| |||||||||| || |||||||    
T  37210045 ttatctttttcaataaaactaatcaatgctatctatttggaaaactaaagtttgttttttt 37209985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 20782489 - 20782564
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||| ||||| |||||||||||| |||||||   |||| ||||||||| | ||| ||||||| ||||||    
T  20782489 attactcttatatttttcaataaaactaataaatgctacctatttaaaaaactaatgtttacttttttatacaaag 20782564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 29961520 - 29961429
Alignment:
Q  155 aaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatga-tttatgaagagttaaaattcaataaataagatga 245  Q
    |||||||||  ||||||||| || |||||||  ||||| |||| ||||||||||||| ||||| ||||||| |||||| | ||||| |||||    
T  29961520 aaatttgttatttgttatctgcaaatttaaacgaaattttgttgcatataataatgattttataaagagttgaaattctacaaatatgatga 29961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 185
Target Start/End: Complemental strand, 45635452 - 45635413
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaa 185  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  45635452 tttaaaacaaaatttgtttcttgttatcttcaaatttaaa 45635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 154 - 200
Target Start/End: Original strand, 2492938 - 2492984
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttaca 200  Q
    ||||||||||| |||||||||||| ||||||| |||||| |||||||    
T  2492938 aaaatttgttttttgttatcttcaaatttaaacaaaattttgttaca 2492984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 6949330 - 6949404
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaa 332  Q
    ||||||||||||||||||| |||| ||||||||||  || ||  ||| |||||||| ||||||||||||| ||||    
T  6949330 tttcaagtgcaaagtaaaacaacagatttgagagatgaagaataaaagactccatggatgttcaaaaggaagaaa 6949404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 21956544 - 21956490
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||| ||||||||||||||||  ||   ||||||||||||||||    
T  21956544 tactcttatctttttcaataaaactaattaatattacctatttgaaaaactaaag 21956490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 49263017 - 49263051
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatg 93  Q
    ||||||||||||||||| |||||||||||||||||    
T  49263017 attactcttatctttttcaataaaactaattaatg 49263051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 24074179 - 24074131
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaa 107  Q
    |||||||||| |||||| ||||||||||||||||| |||  ||||||||    
T  24074179 attactcttaactttttcaataaaactaattaatgttatctatttgaaa 24074131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 25493922 - 25493974
Alignment:
Q  148 taaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttaca 200  Q
    ||||| ||| ||||||||||| |||||||| ||||||| |||||| |||||||    
T  25493922 taaaacaaagtttgtttcttggtatcttcaaatttaaacaaaattttgttaca 25493974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 33889689 - 33889725
Alignment:
Q  149 aaaataaaatttgtttcttgttatcttcatatttaaa 185  Q
    |||| |||||||||||||||||||||||| |||||||    
T  33889689 aaaacaaaatttgtttcttgttatcttcagatttaaa 33889725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 53370482 - 53370422
Alignment:
Q  66 ttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||||||||| |||||| ||| ||||||||||| ||||  |||||||||| || |||||||    
T  53370482 ttatctttttcaataaatctagttaatgctatatattttgaaaactaaagttttttttttt 53370422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 54982822 - 54982766
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    |||||| ||||| |||| ||||||||||| |||||||||  ||||| ||||||||||    
T  54982822 attacttttatccttttcaataaaactaactaatgctatctatttggaaaactaaag 54982766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 450
Target Start/End: Complemental strand, 16806492 - 16806326
Alignment:
Q  284 tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagta 382  Q
    |||||||||| || |||||||| ||| | |||||||||||||||| |||| ||||||||||||||| |||||| |||||  |||||||||||| | | ||    
T  16806492 tttgagagaagaa-aaataaaagacttcgtgaatgttcaaaaggaagaaaaagtggaagactcgttggaattgttgatgagagatgaagagggagcaata 16806394  T
Q  383 gttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||||| | |||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  16806393 gttgaagactcatttgacaagatacaagaaaaagaacaagatgacaatgaagaagaagaagtttcatc 16806326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 450
Target Start/End: Complemental strand, 16845773 - 16845607
Alignment:
Q  284 tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagta 382  Q
    |||||||||| || |||||||| ||| | |||||||||||||||| |||| ||||||||||||||| |||||| |||||  |||||||||||| | | ||    
T  16845773 tttgagagaagaa-aaataaaagacttcgtgaatgttcaaaaggaagaaaaagtggaagactcgttggaattgttgatgagagatgaagagggagcaata 16845675  T
Q  383 gttgaagacccgtttgacaagatacaagaacaaaaacaagatgataatgaagaagaagaagtttcatc 450  Q
    ||||||||| | |||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  16845674 gttgaagactcatttgacaagatacaagaaaaagaacaagatgacaatgaagaagaagaagtttcatc 16845607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 146 - 415
Target Start/End: Original strand, 15507540 - 15507819
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataa--taatgattt-atgaagagttaaaattcaataaataaga 242  Q
    ||||||| ||| ||||||| |||||||||| | ||| ||| |||||| || ||| |||||  ||||| ||  ||||| ||||||||| | ||||||||||    
T  15507540 tttaaaacaaagtttgttttttgttatcttaaaattcaaacaaaattttgctacctataaattaatggttccatgaatagttaaaatactataaataaga 15507639  T
Q  243 tga---ataattgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagag 335  Q
    |||   ||||||| ||||  |||||||||||||||||| ||||| || ||||||||||||||| ||||| |||||||||||||||||||||| ||||||     
T  15507640 tgagtaataattgttaaaaatttcaagtgcaaagtaaacgaacatatctgagagaaaaacaaaataaaagactccatgaatgttcaaaaggaagaaagaa 15507739  T
Q  336 tggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    || ||||||| ||  ||  |||||||||| |||||||||| ||| |||||||| || ||||||| || ||| ||||||||    
T  15507740 tgcaagactcattgaaacggctgatggaaaatgaagagggagaaatagttgaaaactcgtttgaaaaaatagaagaacaa 15507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 38589197 - 38589039
Alignment:
Q  259 tttcaagtgcaaagtaaaagaacaa-tttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgc 356  Q
    |||||||| |||||||||||||||| ||| | ||||||| |||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  38589197 tttcaagtacaaagtaaaagaacaaatttaaaagaaaaaaaaataaaagactccataaatgttcaaaaggaagaaaaagtggaagactcgttagaattgc 38589098  T
Q  357 tgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    | |||   ||||||||||| | | ||||||||||  | |||||||||||||||||||||    
T  38589097 tcatgagggatgaagagggagcaatagttgaagattcatttgacaagatacaagaacaa 38589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 217 - 443
Target Start/End: Original strand, 21252735 - 21252960
Alignment:
Q  217 gaagagttaaaattcaataaataagatgaataa---ttgctaaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaaactcca 311  Q
    ||||||||||||||| ||||||||||||| |||   ||| ||||  |||||||| ||||||||||||||| ||| ||||||| || ||  ||| ||||||    
T  21252735 gaagagttaaaattctataaataagatgagtaacaattgttaaaaatttcaagtacaaagtaaaagaacatattcgagagaagaataatgaaagactcca 21252834  T
Q  312 tgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaaga 411  Q
    |||||  ||||||| | |||| ||| ||||||||||| ||||||||||||  || |||||| || | | ||||||||||| | ||||||||||||||||     
T  21252835 tgaataatcaaaagaaagaaaaagttgaagactcgttggaattgctgatgagaggtgaagatggagcaatagttgaagactcatttgacaagatacaag- 21252933  T
Q  412 acaaaaacaagatgataatgaagaagaagaag 443  Q
         |||||||||| ||||||||||||||||    
T  21252934 -----aacaagatgacaatgaagaagaagaag 21252960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 60 - 415
Target Start/End: Original strand, 41541066 - 41541412
Alignment:
Q  60 ttactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatt 159  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||                  | ||| ||||||| ||    
T  41541066 ttactcttatctttttcaataaaactaattaatgctatatatttgaaaaactaaagtttatttttt-----------------gttttttaaataaagtt 41541148  T
Q  160 tgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg---aataattgct- 254  Q
    |||||||||||||||| | ||||||| |||||| |||||  |||||||||| ||  ||||| ||||||| ||| ||||||||||||   | |||||| |     
T  41541149 tgtttcttgttatcttaaaatttaaacaaaattttgttatctataataatggttcgatgaatagttaaagttctataaataagatgcgtattaattgtta 41541248  T
Q  255 aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaa-caaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttaga 351  Q
    ||| |||||||||| ||  ||||||||| || | |||||||||  |||||||| ||||  || ||||||||||| | ||||||||| ||||||| || ||    
T  41541249 aaaatttcaagtgctaaagaaaagaacatatctaagagaaaaataaaataaaagactctttggatgttcaaaagaaagaaagagtgtaagactcattgga 41541348  T
Q  352 attgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    |   ||||||  || |||| |||| ||| ||||||||||| | |||||||||||| ||||||||    
T  41541349 acgactgatgagaggtgaaaagggagaaatagttgaagactcatttgacaagatagaagaacaa 41541412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 63 - 345
Target Start/End: Original strand, 11083927 - 11084214
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgt 162  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||| ||  ||||||||||||||         | ||  ||| ||| |||||    
T  11083927 ctctgatcttttttaataaaactaattaatgttatatatttgaaaaactaaag-tttgttttttaaacaaagtttgtttgtttttctaaacaaagtttgt 11084025  T
Q  163 ttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg---aataattgct-aaa 257  Q
    |||||| |||||| | |||||||  ||||| ||| || |||||||||| ||  ||||| ||||||||||| ||||||||||||   | |||||| | |||    
T  11084026 ttcttgctatcttaaaatttaaa-caaattttgtcacctataataatggttccatgaatagttaaaattc-ataaataagatgagtagtaattgttaaaa 11084123  T
Q  258 ttttcaagtgcaaagtaaaagaaca-atttgagagaaaaa-caaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactc 345  Q
     |||||| ||||||||||||||||| || |||||||||||  |||||||| ||||||||||||||||||  |  |||||||||||||||||    
T  11084124 atttcaaatgcaaagtaaaagaacagatctgagagaaaaataaaataaaagactccatgaatgttcaaattgtagaaagagtggaagactc 11084214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 158 - 450
Target Start/End: Complemental strand, 45273405 - 45273107
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatga---ataattgc 253  Q
    |||||||||||||||||| | ||||||| |||| | |||||||   || |||| ||  | ||||||||||||| | | |||||||||||   | ||||||    
T  45273405 tttgtttcttgttatcttaaaatttaaacaaaactttgttaca---aacaatggttccaagaagagttaaaatcctacaaataagatgagcaaaaattgc 45273309  T
Q  254 taaat-tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttag 350  Q
    ||||  |||||||||||||||||||||||| |||||||| || || |||||||| | |||||||||||||||||||| |||| | |||||||||| || |    
T  45273308 taaaaatttcaagtgcaaagtaaaagaacatatttgagacaagaa-aaataaaagattccatgaatgttcaaaaggaagaaaaaatggaagactcattgg 45273210  T
Q  351 aattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagata---caagaacaaaaacaagatgataatgaagaagaagaagtttc 447  Q
    || || |||||  |  | |||| || | | ||||||||||| | ||| ||||||||   ||| ||||| |||||||||| ||||||||||||||||||||    
T  45273209 aagtgttgatgagatgtaaagatggagcaatagttgaagactcatttcacaagatacagcaaaaacaagaacaagatgacaatgaagaagaagaagtttc 45273110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 63 - 373
Target Start/End: Complemental strand, 7486381 - 7486078
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnat--gtttaaaataaaattt 160  Q
    ||||||| ||||| ||||||||||||||||| |||| ||||| ||||||||||  | ||||||||||||||          |   ||||||  || ||||    
T  7486381 ctcttatatttttcaataaaactaattaatgttatatatttggaaaactaaagtctgtttttttaaacaaaatttgtttgtttgttttaaagcaatattt 7486282  T
Q  161 gtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataa---ttgct-a 255  Q
    ||||||||||||||||| ||||||| |||||| |||||      |||||| ||| ||||||||||||||||| |||||||||||||||||   ||| | |    
T  7486281 gtttcttgttatcttcaaatttaaacaaaatt-tgtta-----gataatggtttcatgaagagttaaaattctataaataagatgaataatacttgttaa 7486188  T
Q  256 aattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattg 355  Q
    || || |||||||||||||||||   ||| |||||||||||     ||| |||||||||||||||||| | | ||||||||||||||||| |||||| ||    
T  7486187 aaattgcaagtgcaaagtaaaag---aatatgagagaaaaa-----aaatactccatgaatgttcaaacgaaagaaagagtggaagactcattagaactg 7486096  T
Q  356 ctgatggaagatgaagag 373  Q
     |||||| || |||||||    
T  7486095 ttgatgggaggtgaagag 7486078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 59 - 332
Target Start/End: Complemental strand, 158160 - 157885
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag---nnnnnnnnatgtttaaaataa 155  Q
    ||||||||||||||||| ||||||||||||||||  |||| ||||| |||||||||  || |||||||||||||||            | ||||||| ||    
T  158160 attactcttatctttttcaataaaactaattaattttatatatttggaaaactaaaatttgtttttttaaacaaagtttgtttgtttttttttaaaacaa 158061  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg---aataatt 251  Q
    | |||||||||||||| ||||| ||||||| |||||| |||||  |||||||||| ||  ||||||||||||||||  |||||||||| |   | |||||    
T  158060 agtttgtttcttgttaccttcaaatttaaacaaaattttgttatctataataatggttcaatgaagagttaaaattttataaataagacgagtagtaatt 157961  T
Q  252 gctaaattttcaagtgcaaagtaaaagaacaatttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaa 332  Q
    | ||||     ||||||||||||||||||| || |  |||||||| |||||||| ||||||||||| |||||||||| ||||    
T  157960 gttaaa-----aagtgcaaagtaaaagaac-atatatgagaaaaataaataaaagactccatgaatattcaaaaggaagaaa 157885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 415
Target Start/End: Original strand, 33024376 - 33024620
Alignment:
Q  179 atttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgctaaat-tttcaagtgcaaagt 273  Q
    ||||||| |||||| |||||| |||||||||| ||| ||||| ||||||||||  ||||| || |||| ||   || | ||||  |||||||||||||||    
T  33024376 atttaaacaaaattttgttacctataataatggtttcatgaatagttaaaattttataaacaaaatgagtattaatcgttaaaaatttcaagtgcaaagt 33024475  T
Q  274 aaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctgatggaagatgaa 370  Q
    ||||||||| || ||||||||||| ||| ||||| ||| |||  ||||||||||||| ||||||||||||| ||| || |||  |||||| | || ||||    
T  33024476 aaaagaacatatctgagagaaaaataaaataaaagacttcatatatgttcaaaaggaagaaagagtggaaggctcattggaacggctgattggaggtgaa 33024575  T
Q  371 gagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    ||| |  || ||||||||||| |||||||||||||| ||||||||    
T  33024576 gagagacaaatagttgaagactcgtttgacaagatagaagaacaa 33024620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 25714245 - 25714088
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattg 355  Q
    ||||||||||||| | |||||||| || ||||||||||| ||| || || |||||||||||||||||||||| |||||||||||||| || ||||||       
T  25714245 tttcaagtgcaaaattaaagaacagatctgagagaaaaataaaatacaagactccatgaatgttcaaaaggaagaaagagtggaagaatcattagaacga 25714146  T
Q  356 ctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    || |||| || ||||||  ||||| ||||||||||| |||||||||| ||| ||||||||    
T  25714145 ctaatgggaggtgaaga--gggaaatagttgaagactcgtttgacaatataaaagaacaa 25714088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 59 - 210
Target Start/End: Original strand, 27746488 - 27746642
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnat---gtttaaaataa 155  Q
    |||||| |||| ||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||| |||         |    ||||||| ||    
T  27746488 attacttttatatttttcaataaaactaattaatgctatatatttgaaaaactacagtttatttttttaaacgaagtttgtttgttttgctttaaaacaa 27746587  T
Q  156 aatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatg 210  Q
    |||||||||||||||||||||| ||||||| |||||| || ||| ||| ||||||    
T  27746588 aatttgtttcttgttatcttcaaatttaaacaaaattttgctacctatgataatg 27746642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 44898214 - 44898355
Alignment:
Q  161 gtttcttgttatcttcatatttaaataaaattctgttacatataataatgatt-tatgaagagttaaaattcaataaataagatg---aataattgct-a 255  Q
    ||||||||||||||||| ||||||| |||||| | |||| |||||||||| || |||||||||||||||||| |||||||||| |   |||||||| | |    
T  44898214 gtttcttgttatcttcaaatttaaacaaaattttattacctataataatggttctatgaagagttaaaattctataaataagaggggcaataattgttaa 44898313  T
Q  256 aattttcaagtgcaaagtaaaagaac-aatttgagagaaaaa 296  Q
    ||  || ||||||||||||||||||| ||| |||||||||||    
T  44898314 aaaatttaagtgcaaagtaaaagaacaaatctgagagaaaaa 44898355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 255 - 415
Target Start/End: Complemental strand, 20171324 - 20171162
Alignment:
Q  255 aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaaactccatgaatgttcaaaaggaggaaagagtggaagactcgttagaa 352  Q
    |||||||||||||||||||||||||||| || ||||| ||||| ||| ||||   |||||||||||||||||||| ||||||||||||||||| || |||    
T  20171324 aaattttcaagtgcaaagtaaaagaacatatctgagataaaaataaaataaaggatccatgaatgttcaaaaggaagaaagagtggaagactcattggaa 20171225  T
Q  353 ttgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
       |||||   || |||| |||| ||| ||||| ||| |  ||||||||||||| ||||||||    
T  20171224 cgactgataagaggtgaaaagggagaaatagtttaagtcttgtttgacaagatagaagaacaa 20171162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 36244105 - 36244031
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||| |||||||||    
T  36244105 attactcttatattttttaataaaactaattaatgttatatatttggaaaactaaagtttattttcttaaacaaa 36244031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 59 - 199
Target Start/End: Complemental strand, 25965942 - 25965803
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    ||||||||||| ||||| ||||||||| ||||    |||| |||||||||||||||| ||||||| ||||||||||         | ||||||| |||||    
T  25965942 attactcttatatttttcaataaaactcattatcattatatatttgaaaaactaaagtttattttcttaaacaaagtttgttttgt-tttaaaacaaaat 25965844  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttac 199  Q
    ||||||||||||||||||| ||||||| |||||| ||||||    
T  25965843 ttgtttcttgttatcttcaaatttaaacaaaattttgttac 25965803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 4959437 - 4959261
Alignment:
Q  72 tttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgt---ttaaaataaaatttgtttcttg 168  Q
    |||||||||||| |||||||||||||| ||||| | |||||||| || |||||||||||||||         | |   |||||| ||  |||||||||||    
T  4959437 tttttaataaaattaattaatgctatatatttggataactaaag-ttgtttttttaaacaaagtttgtttgttttgttttaaaacaatttttgtttcttg 4959339  T
Q  169 ttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatga 245  Q
    ||||||||| |||||||||||||| |||||| ||| ||||| | || || |||||||||||||| |||||||| ||||    
T  4959338 ttatcttcaaatttaaataaaattttgttacctatgataatagtttcataaagagttaaaattctataaataacatga 4959261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 415
Target Start/End: Original strand, 33659802 - 33660065
Alignment:
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata---attgct 254  Q
    |||||||||||||||||   ||||||| |||||| |||||| ||||| |||| ||  || || || |||||||| ||||||||||| | ||   |||| |    
T  33659802 ttgtttcttgttatcttacaatttaaacaaaattttgttacctataacaatggttccataaatagctaaaattctataaataagataagtagtaattgtt 33659901  T
Q  255 aaat-tttcaagtgcaaagtaaaagaacaatt--tgagagaaaaacaaataaaa--actccatgaatgttcaaaaggaggaaagagtggaagactcgtta 349  Q
    |||  ||| ||||||||||| ||||||| |    ||||||||||| |||  |||  |||||||||||||||||||||| |||||||| ||||||||||||    
T  33659902 aaaaatttaaagtgcaaagttaaagaactagacctgagagaaaaataaaataaacgactccatgaatgttcaaaaggaagaaagagtagaagactcgtta 33660001  T
Q  350 gaattgctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    |||   ||||||   || | | || || || ||||||||||| |||||||||||||| ||||||||    
T  33660002 gaacgactgatg--cgaggtaaagtggaaaatagttgaagactcgtttgacaagatagaagaacaa 33660065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 248
Target Start/End: Original strand, 4316718 - 4316901
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaat 158  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| |||||| |||                 | ||||||| ||| |    
T  4316718 attactcttatctttttcaataaaactaattaatgttatatatttggaaaactaaagtttatttgttt-------tttgtttttgtttttaaaacaaagt 4316810  T
Q  159 ttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaata 248  Q
    ||||| ||||||||||| | ||||||| |||||| ||| || |||||||||||||| || |||| ||||||||| | ||||||||||||||    
T  4316811 ttgttccttgttatctttaaatttaaacaaaattttgtaacctataataatgatttcataaagacttaaaattctacaaataagatgaata 4316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 20171508 - 20171432
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatt-tttttaaacaaag 134  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||| |||||||||| || || |||||||||||||    
T  20171508 attactcttatctttttcaataaaactaattaatgttatatatttggaaaactaaagtttgttatttttaaacaaag 20171432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 44898131 - 44898187
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||    
T  44898131 attactcttatctttttcaataaaactaattaatgttatatatttgaaaaactaaag 44898187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 33659723 - 33659794
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaac 130  Q
    ||||||||||||||||| ||||||||||||||||  |||| |||||||||||| ||| || |||||||||||    
T  33659723 attactcttatctttttcaataaaactaattaatattatatatttgaaaaactgaagtttgtttttttaaac 33659794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 21252601 - 21252666
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttt 124  Q
    ||||| ||||||||||| ||||||| |||||||||||||  |||||||||||||||| ||||||||    
T  21252601 attacacttatctttttcaataaaattaattaatgctatctatttgaaaaactaaagtttattttt 21252666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 1770245 - 1770178
Alignment:
Q  62 actcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaa 129  Q
    |||||||  ||||| ||||||||||||||||| |||| |||||||||||||||| || ||||||||||    
T  1770245 actcttaattttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgtttttttaaa 1770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 4701030 - 4700956
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||| |||| ||||||| |||||||| ||||| ||||| |||||||||  || ||||||||||||||    
T  4701030 attactcttatcgttttcaataaaattaattaatactatatatttggaaaactaaatattgtttttttaaacaaa 4700956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 15507471 - 15507526
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||    
T  15507471 attactcttatctttttcaataaa-ctaattaatgctatataattgaaaaactaaag 15507526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 343
Target Start/End: Complemental strand, 36243951 - 36243821
Alignment:
Q  221 agttaaaattcaataaataagatga---ataattgctaaat-tttcaagtgcaaagtaaaagaa-ca-atttgagagaaaaacaaa-taaaa-actccat 312  Q
    ||||||||||| |||||||||||||   ||||||| ||||  ||||||||| ||||||||| || || || ||||||||||| ||| ||||| | |||||    
T  36243951 agttaaaattctataaataagatgagtaataattgttaaaaatttcaagtgaaaagtaaaaaaaacatatctgagagaaaaataaaataaaagattccat 36243852  T
Q  313 gaatgttcaaaaggaggaaagagtggaagac 343  Q
    |||||||||||||||  ||||||||||||||    
T  36243851 gaatgttcaaaaggaataaagagtggaagac 36243821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 283
Target Start/End: Complemental strand, 42872252 - 42872122
Alignment:
Q  158 tttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg---aataattgc 253  Q
    |||||||||||||||||| | ||||||| |||| | |||||| ||||| ||| | |||||||| | ||||||||  |||||| |||||   ||||||||     
T  42872252 tttgtttcttgttatcttaaaatttaaacaaaactttgttacctataacaatggttttatgaataattaaaattttataaatcagatgagtaataattgt 42872153  T
Q  254 t-aaattttcaagtgcaaagtaaaagaacaa 283  Q
    | ||| ||||||||| |||||||||||||||    
T  42872152 taaaaatttcaagtgtaaagtaaaagaacaa 42872122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 34424755 - 34424692
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat 209  Q
    ||||||| ||||||||||| |||||||||||| ||||||| |||||| |||||| ||| |||||    
T  34424755 tttaaaacaaaatttgttttttgttatcttcaaatttaaacaaaattttgttacctatgataat 34424692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 37814536 - 37814611
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||||||||||||||| |||||||||||| ||| ||||  |||| ||||||||||| |   ||||||||||||||    
T  37814536 attactcttatctttttcaataaaactaataaattctatctatttaaaaaactaaagttcgcttttttaaacaaag 37814611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 150346 - 150272
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagctt--atttttttaaacaaa 133  Q
    |||||||||||  |||| ||||||||||||||||| |||| |||||||||||||||| ||   ||||||||||||||    
T  150346 attactcttat--ttttcaataaaactaattaatgttatatatttgaaaaactaaagtttgattttttttaaacaaa 150272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 29882233 - 29882183
Alignment:
Q  61 tactcttatcttttttaataaaactaattaatgctatacatttgaaaaact 111  Q
    ||||||||||||||| |||||||||||| |||| |||| ||||||||||||    
T  29882233 tactcttatctttttgaataaaactaatcaatgttatatatttgaaaaact 29882183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 13386444 - 13386512
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaa 128  Q
    ||||||||||| ||||| |||||| ||||||||||| ||  || ||||||||||||| ||||||||||||    
T  13386444 attactcttatttttttcaataaa-ctaattaatgccatgtatctgaaaaactaaagtttatttttttaa 13386512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 42756811 - 42756864
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaacta 112  Q
    |||| |||||| ||||| |||||||||||||||||||||| |||| ||||||||    
T  42756811 attattcttatatttttcaataaaactaattaatgctatatatttaaaaaacta 42756864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 33659578 - 33659630
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaact 111  Q
    ||||||||||| ||||| ||||||||||||||||| |||| ||||| ||||||    
T  33659578 attactcttatatttttcaataaaactaattaatgttatatatttggaaaact 33659630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 43042923 - 43043026
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaagnnnnnnnnatgtttaaaataaaatttgtttcttgtt 170  Q
    ||||||||||||| ||||||||| |||| ||||  |||||||||| |||||||||| || ||||         | ||||||| |||||||||||||||||    
T  43042923 ttttttaataaaattaattaatgttatatatttagaaaactaaagtttatttttttcaaaaaagtttaattt-tttttaaaacaaaatttgtttcttgtt 43043021  T
Q  171 atctt 175  Q
    |||||    
T  43043022 atctt 43043026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 12411669 - 12411736
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||| |||||| ||||| ||||||||||||||   ||||| |||||||||||||||| || |||||||    
T  12411669 attattcttatatttttcaataaaactaattataactatatatttgaaaaactaaagttttttttttt 12411736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 12423729 - 12423796
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    |||| |||||| ||||| ||||||||||||||   ||||| |||||||||||||||| || |||||||    
T  12423729 attattcttatatttttcaataaaactaattataactatatatttgaaaaactaaagttttttttttt 12423796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 45273484 - 45273417
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttattttttt 126  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||  |||| ||||| |||| |||||    
T  45273484 attactcttatctttttcaataaaactaattaatgatatctatttagaaaaataaagtttatattttt 45273417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 11073930 - 11073880
Alignment:
Q  150 aaataaaatttgtttcttgttatcttcatatttaaataaaattctgttaca 200  Q
    ||||||| ||||||||||||||| |||| ||||||| |||||| |||||||    
T  11073930 aaataaagtttgtttcttgttattttcaaatttaaacaaaattttgttaca 11073880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 408553 - 408481
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttat--ttttttaaacaaa 133  Q
    |||||| |||||| |||||||||||||||| ||||| |||| ||||| ||||| || |  |||||||||||||    
T  408553 ctcttacctttttcaataaaactaattaatactatatatttaaaaaattaaagtttgttattttttaaacaaa 408481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16806598 - 16806546
Alignment:
Q  80 aaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||||| | |  |||||||||||||||| |||||||||||||||||    
T  16806598 aaaactaattaatgttgtctatttgaaaaactaaag-ttatttttttaaacaaa 16806546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 16845879 - 16845827
Alignment:
Q  80 aaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaa 133  Q
    |||||||||||||| | |  |||||||||||||||| |||||||||||||||||    
T  16845879 aaaactaattaatgttgtctatttgaaaaactaaag-ttatttttttaaacaaa 16845827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 42872321 - 42872273
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaa 108  Q
    ||||||||||| |||||||||||| |||||||||| |||| |||||||||    
T  42872321 attactcttattttttttaataaa-ctaattaatgttatatatttgaaaa 42872273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 3309895 - 3309851
Alignment:
Q  71 ttttttaataaaactaattaatgctatacatttgaaaaactaaag 115  Q
    ||||| |||||||||||||| ||||||  ||||||||||||||||    
T  3309895 tttttcaataaaactaattattgctatctatttgaaaaactaaag 3309851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 12411761 - 12411813
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgtta 198  Q
    ||||||| |||||||||||| | ||||||||| ||||||| |||||| |||||    
T  12411761 tttaaaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgtta 12411813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 12423821 - 12423873
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgtta 198  Q
    ||||||| |||||||||||| | ||||||||| ||||||| |||||| |||||    
T  12423821 tttaaaacaaaatttgtttcatcttatcttcaaatttaaacaaaattttgtta 12423873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 182
Target Start/End: Original strand, 42756901 - 42756937
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatattt 182  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  42756901 tttaaaacaaaatttgtttcttgttatcttcaaattt 42756937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 298
Target Start/End: Original strand, 14896 - 15043
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattg 252  Q
    ||||||| ||| |||||||||| | ||||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14896 aaaatttatttattgttatctttaaatttaaccaaaattttgttacatataataatgattttatgaagagttaaaattctataaataagatgaataattg 14995  T
Q  253 ct-aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaaca 298  Q
     | ||| ||| || ||||||||||||||| | ||||| ||||||||||    
T  14996 ttaaaaatttaaaatgcaaagtaaaagaatagatttgggagaaaaaca 15043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 154 - 298
Target Start/End: Original strand, 23731 - 23878
Alignment:
Q  154 aaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagatgaataattg 252  Q
    ||||||| ||| |||||||||| | ||||||  |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  23731 aaaatttatttattgttatctttaaatttaaccaaaattttgttacatataataatgattttatgaagagttaaaattctataaataagatgaataattg 23830  T
Q  253 ct-aaattttcaagtgcaaagtaaaagaaca-atttgagagaaaaaca 298  Q
     | ||| ||| || ||||||||||||||| | ||||| ||||||||||    
T  23831 ttaaaaatttaaaatgcaaagtaaaagaatagatttgggagaaaaaca 23878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 14813 - 14872
Alignment:
Q  50 ctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaa 109  Q
    |||||| || ||||| |||||||||| ||| ||||||||||||  |||||||||||||||    
T  14813 ctttgtgtggttacttttatctttttcaatcaaactaattaatattatacatttgaaaaa 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 23648 - 23707
Alignment:
Q  50 ctttgtttgattactcttatcttttttaataaaactaattaatgctatacatttgaaaaa 109  Q
    |||||| || ||||| |||||||||| ||| ||||||||||||  |||||||||||||||    
T  23648 ctttgtgtggttacttttatctttttcaatcaaactaattaatattatacatttgaaaaa 23707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 261 - 450
Target Start/End: Original strand, 256945 - 257139
Alignment:
Q  261 tcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattgctg 358  Q
    |||||| ||||||||||||||| |||| |||||| || |||||||| | | ||||||||||||||| || |||| ||||||||||| ||| |||||| ||    
T  256945 tcaagtacaaagtaaaagaacatatttaagagaagaa-aaataaaagattacatgaatgttcaaaaagaagaaacagtggaagacttgttggaattgttg 257043  T
Q  359 atggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaaa----aacaagatgataatgaagaagaagaagtttcatc 450  Q
    |||  || ||||||||| | | |||||||||||   ||||||||||||||||||  ||    |||||||||| ||||||||||||||| |||||||    
T  257044 atgagaggtgaagagggagcaatagttgaagacttatttgacaagatacaagaaagaataacaacaagatgacaatgaagaagaagaaatttcatc 257139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 256769 - 256831
Alignment:
Q  63 ctcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttt 125  Q
    ||||||||||||| ||||||||||||||||| |||  ||||| |||||||||| || ||||||    
T  256769 ctcttatctttttcaataaaactaattaatgttatctatttggaaaactaaagtttttttttt 256831  T

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Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 272443 - 272368
Alignment:
Q  59 attactcttatcttttttaataaaactaattaatgctatacatttgaaaaactaaagcttatttttttaaacaaag 134  Q
    ||||| ||||| ||||| |||||||||||  ||| ||| | |||||||||| ||||| || |||||||||||||||    
T  272443 attacacttatatttttcaataaaactaacgaatactacatatttgaaaaattaaagtttgtttttttaaacaaag 272368  T

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Target: scaffold0841 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 415
Target Start/End: Complemental strand, 4569 - 4412
Alignment:
Q  259 tttcaagtgcaaagtaaaagaaca-atttgagagaaaaacaaa-taaaa-actccatgaatgttcaaaaggaggaaagagtggaagactcgttagaattg 355  Q
    ||||||||||||| | |||||||| || ||||||||||| ||| || || |||||||||||||||||||||| |||||||||||||| || ||||||       
T  4569 tttcaagtgcaaaattaaagaacatatctgagagaaaaataaaatacaagactccatgaatgttcaaaaggaagaaagagtggaagaatcattagaacga 4470  T
Q  356 ctgatggaagatgaagagggggaagtagttgaagacccgtttgacaagatacaagaacaa 415  Q
    |  |||| || ||||||  ||||| ||||||||||| |||||||||| ||| ||||||||    
T  4469 ccaatgggaggtgaaga--gggaaatagttgaagactcgtttgacaatataaaagaacaa 4412  T

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Target: scaffold1130 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 245
Target Start/End: Original strand, 467 - 567
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||||| ||||||| ||||||| |||||| |||||  ||| ||||| | || ||||||||||||||||| |||||||| |||    
T  467 tttaaaacaaaatttgtttcttgtcatcttcaaatttaaacaaaattttgttatctatgataatagtttcatgaagagttaaaattctataaataacatg 566  T
Q  245 a 245  Q
    |    
T  567 a 567  T

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Target: scaffold0188 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 6406 - 6315
Alignment:
Q  153 taaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataatgattt-atgaagagttaaaattcaataaataagat 243  Q
    |||| ||| |||||||||||||| ||||||||| |||||| |||||  |||||||||| ||| ||||| ||||||||||| |||||||||||    
T  6406 taaagtttatttcttgttatcttaatatttaaacaaaattttgttatctataataatggtttcatgaatagttaaaattctataaataagat 6315  T

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Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 46582 - 46482
Alignment:
Q  146 tttaaaataaaatttgtttcttgttatcttcatatttaaataaaattctgttacatataataat-gatttatgaagagttaaaattcaataaataagatg 244  Q
    ||||||| |||||||||||||||| ||||||| ||||||| |||||| |||||  ||| ||||| | |  ||||||||||||||||| |||||||| |||    
T  46582 tttaaaacaaaatttgtttcttgtcatcttcaaatttaaacaaaattttgttatctatgataatagttccatgaagagttaaaattctataaataacatg 46483  T
Q  245 a 245  Q
    |    
T  46482 a 46482  T

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Target: scaffold1986 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 355 - 430
Alignment:
Q  259 tttcaagtgcaaagtaaaagaacaattt--gagagaaaaacaaataaaa-actccatgaatgttcaaaaggaggaaa 332  Q
    |||||||||||||||||||||| || ||  ||||||| || |||||||| |||||||||||||||||||||| ||||    
T  355 tttcaagtgcaaagtaaaagaataaatttcgagagaagaa-aaataaaagactccatgaatgttcaaaaggaagaaa 430  T

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