View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6296_low_15 (Length: 216)

Name: NF6296_low_15
Description: NF6296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6296_low_15
NF6296_low_15
[»] chr8 (18 HSPs)
chr8 (1-200)||(3742202-3742400)
chr8 (1-170)||(29315220-29315389)
chr8 (15-176)||(36683400-36683559)
chr8 (7-114)||(34146744-34146851)
chr8 (3-114)||(14897043-14897154)
chr8 (7-169)||(32234164-32234324)
chr8 (7-162)||(35970069-35970223)
chr8 (7-112)||(38402011-38402114)
chr8 (7-169)||(34039353-34039515)
chr8 (7-107)||(7694941-7695041)
chr8 (7-169)||(27232149-27232309)
chr8 (7-109)||(5871314-5871416)
chr8 (10-127)||(9455560-9455676)
chr8 (12-112)||(1256278-1256378)
chr8 (10-127)||(3443346-3443464)
chr8 (7-112)||(1530245-1530350)
chr8 (76-164)||(13385444-13385532)
chr8 (60-111)||(38459090-38459141)
[»] chr1 (25 HSPs)
chr1 (1-170)||(4671885-4672054)
chr1 (1-167)||(52415618-52415785)
chr1 (1-169)||(32769460-32769629)
chr1 (1-158)||(40518582-40518737)
chr1 (3-114)||(23698884-23698995)
chr1 (1-154)||(30281089-30281240)
chr1 (7-169)||(41117461-41117623)
chr1 (1-110)||(11795508-11795616)
chr1 (7-169)||(6295177-6295339)
chr1 (7-169)||(10430070-10430231)
chr1 (8-114)||(1394831-1394936)
chr1 (7-172)||(13254129-13254294)
chr1 (3-163)||(36319432-36319591)
chr1 (14-127)||(4395556-4395669)
chr1 (10-169)||(31622763-31622922)
chr1 (7-112)||(39387007-39387112)
chr1 (12-108)||(43021437-43021531)
chr1 (7-171)||(19270151-19270314)
chr1 (17-115)||(2752141-2752238)
chr1 (10-169)||(11237580-11237738)
chr1 (69-170)||(1674237-1674336)
chr1 (7-74)||(45925886-45925953)
chr1 (60-110)||(11817538-11817588)
chr1 (10-41)||(23697530-23697561)
chr1 (76-110)||(23699827-23699861)
[»] chr5 (26 HSPs)
chr5 (1-169)||(37270044-37270211)
chr5 (1-169)||(248881-249047)
chr5 (7-157)||(17201875-17202025)
chr5 (7-112)||(6428558-6428663)
chr5 (13-112)||(1584179-1584278)
chr5 (2-111)||(32474640-32474749)
chr5 (3-171)||(28620517-28620682)
chr5 (7-119)||(8544164-8544276)
chr5 (10-169)||(20202161-20202320)
chr5 (10-114)||(36059592-36059695)
chr5 (7-108)||(39940167-39940267)
chr5 (3-163)||(19804229-19804389)
chr5 (60-164)||(39585343-39585447)
chr5 (1-111)||(13219847-13219960)
chr5 (7-97)||(11825238-11825328)
chr5 (7-112)||(12436178-12436282)
chr5 (45-109)||(36244539-36244603)
chr5 (17-112)||(1583993-1584091)
chr5 (66-112)||(25612756-25612801)
chr5 (7-112)||(11991722-11991827)
chr5 (10-114)||(16366043-16366147)
chr5 (20-169)||(17558305-17558453)
chr5 (7-90)||(14967846-14967929)
chr5 (3-74)||(42673551-42673621)
chr5 (76-114)||(19133072-19133110)
chr5 (60-178)||(32717580-32717697)
[»] chr3 (32 HSPs)
chr3 (1-169)||(21933890-21934056)
chr3 (1-165)||(38750445-38750608)
chr3 (7-169)||(2599531-2599693)
chr3 (12-169)||(27817917-27818074)
chr3 (1-115)||(21916028-21916139)
chr3 (7-169)||(16236976-16237138)
chr3 (7-169)||(45647067-45647228)
chr3 (10-169)||(7259285-7259445)
chr3 (3-154)||(37030369-37030521)
chr3 (7-106)||(45759109-45759208)
chr3 (7-112)||(2094241-2094346)
chr3 (13-127)||(25841492-25841603)
chr3 (13-157)||(296929-297073)
chr3 (11-162)||(34669155-34669307)
chr3 (1-112)||(5494089-5494198)
chr3 (7-165)||(9589230-9589391)
chr3 (7-115)||(633073-633180)
chr3 (10-116)||(13779145-13779250)
chr3 (7-97)||(19229316-19229405)
chr3 (7-127)||(376186-376305)
chr3 (60-116)||(6472278-6472334)
chr3 (60-116)||(6749467-6749523)
chr3 (7-91)||(45667908-45667992)
chr3 (7-114)||(34823637-34823743)
chr3 (1-112)||(42735061-42735171)
chr3 (10-124)||(21959353-21959467)
chr3 (77-159)||(34824239-34824321)
chr3 (82-135)||(5482026-5482079)
chr3 (3-114)||(12568849-12568959)
chr3 (3-114)||(13545313-13545423)
chr3 (14-109)||(27264278-27264373)
chr3 (60-114)||(1405410-1405464)
[»] chr6 (11 HSPs)
chr6 (1-163)||(26252000-26252161)
chr6 (16-163)||(6026522-6026668)
chr6 (10-169)||(7972243-7972402)
chr6 (7-106)||(2437273-2437372)
chr6 (10-112)||(14093252-14093354)
chr6 (10-169)||(21526905-21527064)
chr6 (7-109)||(23411005-23411107)
chr6 (7-169)||(8049831-8049995)
chr6 (7-110)||(25057038-25057140)
chr6 (60-115)||(31656114-31656169)
chr6 (65-115)||(6110662-6110712)
[»] chr4 (30 HSPs)
chr4 (1-170)||(33890073-33890240)
chr4 (1-168)||(41503028-41503196)
chr4 (7-172)||(17330891-17331055)
chr4 (7-169)||(19443032-19443189)
chr4 (3-116)||(24073372-24073485)
chr4 (7-112)||(45666779-45666884)
chr4 (7-171)||(9808092-9808253)
chr4 (1-109)||(38839943-38840049)
chr4 (7-169)||(47943946-47944103)
chr4 (7-169)||(50721408-50721569)
chr4 (8-169)||(37209530-37209691)
chr4 (7-169)||(49299306-49299469)
chr4 (10-171)||(38433825-38433985)
chr4 (14-170)||(46430386-46430542)
chr4 (7-169)||(6949503-6949651)
chr4 (3-112)||(54982199-54982308)
chr4 (60-112)||(34031511-34031563)
chr4 (7-169)||(1821057-1821217)
chr4 (12-169)||(37371006-37371166)
chr4 (14-114)||(49263547-49263649)
chr4 (46-171)||(38044230-38044355)
chr4 (15-159)||(2685101-2685245)
chr4 (62-170)||(9088730-9088838)
chr4 (10-111)||(55344059-55344161)
chr4 (1-141)||(53393838-53393978)
chr4 (1-111)||(46016413-46016522)
chr4 (1-111)||(46250321-46250430)
chr4 (57-127)||(53370080-53370150)
chr4 (10-41)||(24538016-24538047)
chr4 (28-115)||(33809416-33809503)
[»] chr7 (30 HSPs)
chr7 (7-171)||(16197325-16197488)
chr7 (7-173)||(27723757-27723918)
chr7 (3-119)||(41690255-41690371)
chr7 (3-113)||(4567853-4567962)
chr7 (7-169)||(35792491-35792653)
chr7 (57-162)||(33258942-33259047)
chr7 (14-169)||(46671618-46671775)
chr7 (7-114)||(2798841-2798948)
chr7 (7-169)||(3835236-3835398)
chr7 (14-112)||(39618171-39618269)
chr7 (3-111)||(47541924-47542034)
chr7 (10-169)||(14771015-14771174)
chr7 (10-169)||(15221467-15221626)
chr7 (10-169)||(39434426-39434586)
chr7 (10-169)||(4962536-4962694)
chr7 (7-158)||(37124653-37124803)
chr7 (12-114)||(15643633-15643734)
chr7 (7-163)||(43369023-43369176)
chr7 (7-163)||(10534415-10534570)
chr7 (7-169)||(2271324-2271485)
chr7 (7-169)||(28226789-28226951)
chr7 (60-169)||(1752037-1752146)
chr7 (3-170)||(17270080-17270246)
chr7 (18-111)||(8614563-8614657)
chr7 (60-108)||(12394778-12394826)
chr7 (60-127)||(27062002-27062069)
chr7 (9-88)||(372403-372481)
chr7 (14-109)||(2273282-2273376)
chr7 (10-41)||(4678857-4678888)
chr7 (10-41)||(24393809-24393840)
[»] chr2 (28 HSPs)
chr2 (7-169)||(29408315-29408475)
chr2 (7-164)||(41541645-41541802)
chr2 (7-169)||(1397958-1398115)
chr2 (10-166)||(4958966-4959122)
chr2 (57-169)||(20170898-20171010)
chr2 (12-107)||(45271885-45271979)
chr2 (7-112)||(3309450-3309554)
chr2 (7-115)||(11084370-11084478)
chr2 (10-169)||(34424362-34424521)
chr2 (13-169)||(12412943-12413100)
chr2 (13-169)||(12425003-12425160)
chr2 (7-97)||(25713867-25713958)
chr2 (3-168)||(33660597-33660760)
chr2 (7-114)||(42871943-42872048)
chr2 (12-162)||(27746964-27747112)
chr2 (7-114)||(44898655-44898762)
chr2 (7-89)||(36243578-36243659)
chr2 (7-169)||(25713477-25713640)
chr2 (61-112)||(16806077-16806128)
chr2 (61-112)||(16845358-16845409)
chr2 (60-114)||(4317144-4317198)
chr2 (57-111)||(15507978-15508032)
chr2 (7-41)||(16806137-16806171)
chr2 (7-41)||(16845418-16845452)
chr2 (7-109)||(21253054-21253155)
chr2 (10-98)||(25965306-25965394)
chr2 (66-116)||(157645-157695)
chr2 (13-114)||(43043236-43043335)
[»] scaffold1986 (1 HSPs)
scaffold1986 (7-112)||(617-722)
[»] scaffold1327 (1 HSPs)
scaffold1327 (7-112)||(1248-1352)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-112)||(257259-257364)
[»] scaffold1130 (1 HSPs)
scaffold1130 (10-169)||(707-866)
[»] scaffold0841 (2 HSPs)
scaffold0841 (7-119)||(4183-4295)
scaffold0841 (7-119)||(3865-3978)
[»] scaffold0188 (1 HSPs)
scaffold0188 (7-116)||(5635-5745)
[»] scaffold0018 (1 HSPs)
scaffold0018 (60-111)||(184588-184639)
[»] scaffold0097 (1 HSPs)
scaffold0097 (10-111)||(48529-48629)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 3742202 - 3742400
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3742202 aaaaatataacatattaaatttattggaaagataaagtgtgcgtcaaaaagtagagatatattggtggattaaattgagggtataataaaaagaaaatgt 3742301  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaatatctatgcttagcatttgaagtagcaaac 200  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3742302 gcaaaaatacactttgttatttttgtggaaattttcgaaaacgacattaaaaaaggaacgg-gggagtaatatctatgcttagcatttgaagtagcaaac 3742400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 29315389 - 29315220
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||||||||||||||| ||||||||||| || | |||||| || | ||||||||||||||||||||||||||||||||| ||||||||||    
T  29315389 aaaaatataacatattaaatttattgaaaagataaagtatgtgccaaaaaataaatatatattggtggattaaattgagggtataataggaagaaaatgt 29315290  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaa 170  Q
    ||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  29315289 gcaaatatacactttgctattttcatggaaattttctaaaacgacacttaaaaaagaacggagggagtaa 29315220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 36683400 - 36683559
Alignment:
Q  15 ttaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactt 114  Q
    |||||||||||||||||||||||||||   |||||| ||||||||| || || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  36683400 ttaaatttattggaaagataaagtgtgc--caaaaaatagagatatgttagtcgattaaattgagggtataataggaagaaaatgtgcaaaaatacactt 36683497  T
Q  115 tgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaatatcta 176  Q
    || || |||  ||||||||||| ||||||||||| |||| ||||||||||||||| ||||||    
T  36683498 tgctattttcatggaaattttctaaaacaacacttaaaagggaacggagggagtattatcta 36683559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 34146744 - 34146851
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||||| |||| |  ||||| ||   || ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  34146744 ataacatattaaatttattggaaagataaaatgtgtgcaaaaaaataagaatttattggtggattaaaatgagggtataatagaaagaaaatgtgtaaaa 34146843  T
Q  107 atacactt 114  Q
    ||||||||    
T  34146844 atacactt 34146851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 14897043 - 14897154
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||||||||||||||||||| ||||| |||| ||| |  | ||| ||   |||||||||||||||||| |||||| ||||||||||||||||||||    
T  14897043 aaatataacatattaaatttattgaaaagagaaagcgtgtgcaagaaaataagaatatattggtggattaaaatgagggcataatagaaagaaaatgtgc 14897142  T
Q  103 aaaaatacactt 114  Q
    ||||||||||||    
T  14897143 aaaaatacactt 14897154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 32234164 - 32234324
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||  ||| ||||||||||    ||||| |||  || |||||||||||| || |||||||||||||| |||||||||| |||||    
T  32234164 ataacatattaaatttattaaaaaaataaagtgtgca--aaaaaataggaatttattggtggattgaaatgagggtataataggaagaaaatgtacaaaa 32234261  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || |||  || |||||||| |||| |||||| ||||||||||||||||||||    
T  32234262 atacacatcgctattttgatgtaaattttctaaaaaaacacttaaaaaggaacggagggagta 32234324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 162
Target Start/End: Complemental strand, 35970223 - 35970069
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||| | |||| ||| |  ||||| |||  ||||||||||||||||||  |||||||| |||| ||||||||||||||||    
T  35970223 ataacatattaaatttattggaaaaagaaagcgtgtgaaaaaaa-taggaatatattggtggattaaaacgagggtatgataggaagaaaatgtgcaaaa 35970125  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacgga 162  Q
    |||||||||| || ||| |||  ||| ||| ||||| | | | |||||||||||||    
T  35970124 atacactttgctaatttggtgttaatattctaaaacgatagttaaaaaggaacgga 35970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 38402011 - 38402114
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||| |||||||||||||||||||||| | |||||| ||   || ||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  38402011 ataacatattaagtttattggaaagataaagtgtgtg-caaaaattaagaatttatcggtggattaaaatgagggtataatagaaag-aaatgtgcaaaa 38402108  T
Q  107 atacac 112  Q
    ||||||    
T  38402109 atacac 38402114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 34039353 - 34039515
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| |||||||| |||||||||||| ||| |||| |  | ||| |||  ||||||||||||||||||  |||| || ||||||||||||||||| ||||    
T  34039353 ataatatattaaacttattggaaagagaaaatgtgtgcaagaaaataggaatatattggtggattaaaacgaggataaaatagaaagaaaatgtgtaaaa 34039452  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||||||  ||| |||||||  ||  ||| ||||| ||| | ||||||||| ||||||||||    
T  34039453 atacacttcattatttttgtgttaaaattctaaaacgacatttaaaaaggaaaggagggagta 34039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 7695041 - 7694941
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| |||||||||||||| |  ||||| |||  || |||| || ||||||| ||||| |||||||| ||||||||||||||||    
T  7695041 ataacatattaaatttattgaaaagataaagtgtgtgcaaaaaaataggaatttatttgtagattaaaatgaggatataataggaagaaaatgtgcaaaa 7694942  T
Q  107 a 107  Q
    |    
T  7694941 a 7694941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 27232149 - 27232309
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| |||||||||| |||| |  ||||| |||  || ||||||| ||||||| ||||||||||||   |||||||||| |||||    
T  27232149 ataacatattaaatttatttgaaagataaaatgtgtgcaaaaaactagtaatttattggttgattaaaatgagggtataat--gaagaaaatgtacaaaa 27232246  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
     ||||| | | || ||| |    ||||||| |||| |||||| ||||||||||||||||||||    
T  27232247 gtacacatcgctaatttgggtttaattttctaaaaaaacacttaaaaaggaacggagggagta 27232309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 5871314 - 5871416
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||| |||||||| ||||| |||| |  ||||| |||  || ||||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  5871314 ataacatattaaattcattggaaaaataaaatgtgtgcgaaaaaataggaatttattggtggattaaaatgaaggtataataggaagaaaatgtgtaaaa 5871413  T
Q  107 ata 109  Q
    |||    
T  5871414 ata 5871416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 9455560 - 9455676
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagt-agagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaat 108  Q
    ||||||||||||||||||||| ||||| |||| |  ||||||| ||| || |||| ||| |||||| ||||||||||||||||| ||| |||||||||||    
T  9455560 acatattaaatttattggaaaaataaaatgtgtgcaaaaaagtaagaaat-tattagtgtattaaaatgagggtataatagaaa-aaagtgtgcaaaaat 9455657  T
Q  109 acactttgttacttttgtg 127  Q
    |||||||| || |||||||    
T  9455658 acactttgctatttttgtg 9455676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 1256378 - 1256278
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    |||||||||||||||||||||||||||||| |  ||||| ||   || ||||||||||||||| | || |||||||||  | ||||||||||||||||||    
T  1256378 atattaaatttattggaaagataaagtgtgtgctaaaaaataagaatttattggtggattaaaattagagtataatagggaaaaaatgtgcaaaaataca 1256279  T
Q  112 c 112  Q
    |    
T  1256278 c 1256278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 3443464 - 3443346
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataata-gaaagaaaatgtgcaaaaat 108  Q
    ||||||||||||||||||| |||||||||||| |  ||| | |||  |  |||| |||||||||| ||||||||||||| |||| ||| |||||||||||    
T  3443464 acatattaaatttattggatagataaagtgtgtgaaaaagaataggaaattattagtggattaaaatgagggtataataggaaaaaaagtgtgcaaaaat 3443365  T
Q  109 acactttgttacttttgtg 127  Q
    |||||| | || |||||||    
T  3443364 acacttcgctatttttgtg 3443346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 1530350 - 1530245
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| ||||||||| |||| |  ||||| |||  |  |||| || ||||||| ||| |||||||||  |||||||| |||||||    
T  1530350 ataacatattaaatttattgaaaagataaaatgtgtggaaaaaaataggaagttatttgtagattaaaatgaaggtataataagaagaaaatttgcaaaa 1530251  T
Q  107 atacac 112  Q
    ||||||    
T  1530250 atacac 1530245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 164
Target Start/End: Original strand, 13385444 - 13385532
Alignment:
Q  76 tgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagg 164  Q
    |||||||||||||| ||||||||||| ||| ||||||||| ||| |||||||  | | ||| ||||| ||||| ||||| |||||||||    
T  13385444 tgagggtataataggaagaaaatgtgtaaatatacactttcttaattttgtgttactattccaaaacgacacttaaaaaagaacggagg 13385532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 38459090 - 38459141
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| |||||||||    
T  38459090 tattgttggattaaaatgagggtataatagaaagaaattgtgtaaaaataca 38459141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 1e-55; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 4671885 - 4672054
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||||| |||||||||| |||||||||| |||||||| |    
T  4671885 aaaaatataacatgttaaatttattggaaagataaagtgtaattcaaaaattagagatatattggtgaattaaattgaaggtataataggaagaaaatat 4671984  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaa 170  Q
    |||||||||||||||| || ||| |||||||||||| ||||| ||||| ||||| |||||||||||||||    
T  4671985 gcaaaaatacactttgctattttcgtggaaattttctaaaacgacacttaaaaaagaacggagggagtaa 4672054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 52415618 - 52415785
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtc-aaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatg 99  Q
    |||||||||||||||||||||||||||||||| |||||||| | | ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  52415618 aaaaatataacatattaaatttattggaaagaaaaagtgtgtgccgaaaaaatagggatatattggtggattaaattgagggtataataggaagaaaatg 52415717  T
Q  100 tgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggag 167  Q
    || |||||||||||||| || ||| |||| ||||||| ||||| ||||| ||||||||||||||||||    
T  52415718 tgtaaaaatacactttgctattttcgtggtaattttctaaaacgacacttaaaaaggaacggagggag 52415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32769460 - 32769629
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaag-tagagatatattggtggattaaattgagggtataatagaaagaaaatg 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  32769460 aaaaatataacatattaaatttattggaaagataaagtgtgtgccaaaaaaatagagatatattggtggattaaattgaggatataataggaagaaaatg 32769559  T
Q  100 tgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    || ||||||| | |||| || ||| ||| |||||||| ||||| ||||| ||||||||| ||||||||||    
T  32769560 tgaaaaaataaaatttgctattttcgtgaaaattttctaaaacgacacttaaaaaggaatggagggagta 32769629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 40518737 - 40518582
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||   |||||| |||||||||||| || |||||||||||||||||||||| ||||||||||    
T  40518737 aaaaatataacatattaaatttattggaaatataaagtgtgc--caaaaaatagagatatattagtagattaaattgagggtataataggaagaaaatgt 40518640  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaa 158  Q
    ||||||||||||||||||| |||  |||||| |||  ||||| ||||| |||||||||    
T  40518639 gcaaaaatacactttgttattttcatggaaaatttttaaaacgacacttaaaaaggaa 40518582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 23698995 - 23698884
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    ||||||||||||||||||| |||| |||||||||||||| | |||||| ||   |||||||||||||||||||||||  |||||||| ||||||||||||    
T  23698995 aaatataacatattaaattcattgaaaagataaagtgtgtgccaaaaaataagaatatattggtggattaaattgagattataataggaagaaaatgtgc 23698896  T
Q  103 aaaaatacactt 114  Q
    ||||||||||||    
T  23698895 aaaaatacactt 23698884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 30281089 - 30281240
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||| |||||||||||||| ||||||||| ||||   |||||| ||||||||||||  || ||||||||||||||||||||| |||||||| |    
T  30281089 aaaaatataacttattaaatttattgaaaagataaactgtgc--caaaaaatagagatatattaatgaattaaattgagggtataataggaagaaaatat 30281186  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaa 154  Q
    |||||||||||||||| || |||  |||||| |||  ||||| ||||| |||||    
T  30281187 gcaaaaatacactttgctattttgatggaaaattttcaaaacgacacttaaaaa 30281240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 41117461 - 41117623
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| || | || ||||||||||||||| ||||||||||||||||| ||||  |||||||    
T  41117461 ataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataaaaatttattggtggattaaaatgagggtataatagaaaaaaaaaatgcaaaa 41117560  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||||| ||||  ||||| ||||| ||| ||||||||||    
T  41117561 atacacatcgctagtttggtgttaattttctaaaaagacacttaaaaaagaatggagggagta 41117623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11795616 - 11795508
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||  ||  |||||||||||||||||| |||||||||||||  ||||||||||    
T  11795616 aaaaatataacatattaaatttattggaaagagaaagtgtgtg-caaaaaaaagtaatatattggtggattaaaatgagggtataatatgaagaaaatgt 11795518  T
Q  101 gcaaaaatac 110  Q
    ||||||||||    
T  11795517 gcaaaaatac 11795508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 6295339 - 6295177
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||| || |||||||||| |||| || ||||| |||| || |||||||||| |||  |||||||||||||||||||||||||||||||    
T  6295339 ataacatattaaattttttagaaagataaaatgtgtgtaaaaaaatagaaatttattggtggagtaacatgagggtataatagaaagaaaatgtgcaaaa 6295240  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||||| ||||  ||| | ||||||||||| | ||||||    
T  6295239 atacacatcgctattttagtgttaattttctaaaaagacatttaaaaaggaacgtacggagta 6295177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 10430231 - 10430070
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||| |||||||||||||||||||| |||||||| | ||||||||||  |||||||||||||||||| | ||| ||||||| |||  |||| |||||||    
T  10430231 ataacgtattaaatttattggaaagaaaaagtgtgtg-caaaaagtaggaatatattggtggattaaaataaggatataataaaaattaaatttgcaaaa 10430133  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||||| || |||  ||  ||| ||| ||||||||||| ||||| ||||||||| ||||    
T  10430132 atacactttgctaatttgatgttaatattccaaaacaacacttaaaaaagaacggaggaagta 10430070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 1394831 - 1394936
Alignment:
Q  8 taacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaa 107  Q
    ||||||||||||||||||||||| | |||||||| |  ||||| |||  |||||||||||||||||| ||||||||| |||||||||||||||| |||||    
T  1394831 taacatattaaatttattggaaaaagaaagtgtgcgaaaaaaa-taggaatatattggtggattaaaatgagggtatgatagaaagaaaatgtgaaaaaa 1394929  T
Q  108 tacactt 114  Q
    |||||||    
T  1394930 tacactt 1394936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 13254294 - 13254129
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||| |||||| |  ||||| |||  || ||||| ||||||||| |||| | ||||||  ||||||||||||||||    
T  13254294 ataacatattaaatttattggaaagatatagtgtgtgaaaaaaaataggaatttattgatggattaaaatgagagcataatatgaagaaaatgtgcaaaa 13254195  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaata 172  Q
    |||||| | | || |||  ||  ||||||| |||| ||| || ||||||||||||| |||||||||    
T  13254194 atacacatcgctattttgatgttaattttctaaaaaaacgcttaaaaaggaacggatggagtaata 13254129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 36319591 - 36319432
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    ||||||||||||||||||||||||||||||||| ||||| |  ||||| | |  |  ||| ||||||||||| |||| ||||||||| ||||||||||||    
T  36319591 aaatataacatattaaatttattggaaagataaggtgtgtgcaaaaaaattggaacttat-ggtggattaaaatgagagtataataggaagaaaatgtgc 36319493  T
Q  103 aaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
    |||||||||| | | || |||||||  ||||||| ||||  | ||| ||||||||||||||    
T  36319492 aaaaatacacatcgctatttttgtgttaattttctaaaaagatacttaaaaaggaacggag 36319432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 4395669 - 4395556
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacact 113  Q
    ||||||||||||||||||| |||||||| ||  |||| |||  |||||||||||||||||| ||| |||||||||| ||||||| ||| |||||||||||    
T  4395669 attaaatttattggaaagagaaagtgtgcgtagaaaaataggaatatattggtggattaaaatgatggtataataggaagaaaaggtgaaaaaatacact 4395570  T
Q  114 ttgttacttttgtg 127  Q
    | | || |||||||    
T  4395569 tcgctatttttgtg 4395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 31622922 - 31622763
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||||||| |||||||||||||| |  ||||| |||  |  |||| ||||| |||| |||||| ||||||| |  ||||||||||||||||    
T  31622922 acatattaaatttattgtaaagataaagtgtgtgcaaaaaaataggaaattattagtggagtaaaatgagggaataataggagaaaaatgtgcaaaaata 31622823  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| |||| |||||||  ||  ||| | ||  ||||| ||||||||||||| ||||||    
T  31622822 cacttcgttatttttgtgctaaaattctagaatgacacttaaaaaggaacggatggagta 31622763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 39387007 - 39387112
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||| ||||||||| ||||||||||||||| |  |||||||||  || |||| |||||||||| ||||  |||||||| |||||||| |||||||    
T  39387007 ataacatataaaatttattcgaaagataaagtgtgtgcaaaaaagtaggaatttattcgtggattaaaatgagaatataataggaagaaaatttgcaaaa 39387106  T
Q  107 atacac 112  Q
     |||||    
T  39387107 gtacac 39387112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 43021437 - 43021531
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaat 108  Q
    ||||||||||||||||||||| ||||||||    ||||| ||   |||||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  43021437 atattaaatttattggaaagagaaagtgtgca--aaaaaatatgaatatattggtggattaaactaagggtataatagaaagtaaatgtgcaaaaat 43021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 19270151 - 19270314
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| ||||||||||||||||||||| ||||| |  | |||||| ||   || ||||||||||||||| |||||||||||||  |  ||||||||||| |    
T  19270151 ataaaatattaaatttattggaaagagaaagtttatg-caaaaaataacaatttattggtggattaaaatgagggtataataagacaaaaatgtgcaata 19270249  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaat 171  Q
    |||||||| | || ||| |||  ||| ||  ||||| ||||| ||||||||||||||| ||||||    
T  19270250 atacacttcgctaatttggtgttaatatttcaaaacgacacttaaaaaggaacggaggtagtaat 19270314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 2752141 - 2752238
Alignment:
Q  17 aaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacacttt 115  Q
    ||||||||| |||||| |||||||| | |||||| || | |  ||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  2752141 aaatttatttgaaagagaaagtgtgtg-caaaaaatataaacttattggtcgattaaaatgagggtataataggaagaaaatgtacaaaaatacacttt 2752238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 11237738 - 11237580
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||||||||||||||||| |||| |  ||||| | || |  |||| |||||||||| ||| |||||||||| || ||||  ||||||||||    
T  11237738 acatattaaatttattggaaagataaaatgtgtgcaaaaaaattgaaaattattagtggattaaaatgatggtataataggaa-aaaaaatgcaaaaata 11237640  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||   || |||||||  |   ||| ||||| ||||| |||||| |||||||||||||    
T  11237639 cacttcactatttttgtgttataattctaaaacgacacttaaaaagtaacggagggagta 11237580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 170
Target Start/End: Complemental strand, 1674336 - 1674237
Alignment:
Q  69 attaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagt 168  Q
    |||||| ||||| ||| |||||||  |||||| |||||||||||||||||| |||||||  ||  ||| ||||| ||||| ||||| |||||||||||||    
T  1674336 attaaaatgaggatatgatagaaa--aaatgtacaaaaatacactttgttatttttgtgttaaaattctaaaacgacacttaaaaaagaacggagggagt 1674239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 45925886 - 45925953
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaa 74  Q
    |||||||||||||||||||| ||||| |||||||| |  ||||| |||  ||||||||||||||||||    
T  45925886 ataacatattaaatttattgaaaagagaaagtgtgtgcaaaaaaataggaatatattggtggattaaa 45925953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 11817588 - 11817538
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatac 110  Q
    ||||||||||||||| |||||||||||||| || ||||| |||||||||||    
T  11817588 tattggtggattaaaatgagggtataataggaaaaaaatctgcaaaaatac 11817538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 23697561 - 23697530
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtg 41  Q
    ||||||||||||||||||||||||||||||||    
T  23697561 acatattaaatttattggaaagataaagtgtg 23697530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 23699861 - 23699827
Alignment:
Q  76 tgagggtataatagaaagaaaatgtgcaaaaatac 110  Q
    |||||||||||||| ||||||||||||||||||||    
T  23699861 tgagggtataataggaagaaaatgtgcaaaaatac 23699827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 1e-52; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 37270044 - 37270211
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||||| || ||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  37270044 aaaaatataacatattaaatttattagaatgataaagtgtgag-caaaaaatatagatatattagtggattaaattgagggtatagtaggaagaaaatgt 37270142  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||||||||||| || |||||||||||||||| ||||| ||||| |||||||||  |||||||||    
T  37270143 gcaaaaatacactttgctatttttgtggaaattttctaaaacgacacttaaaaaggaatcgagggagta 37270211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 249047 - 248881
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||   |||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  249047 aaaaatataacatattaaattttttggaaagataaagtgtgc--caaaaaatagagatatgttagtggattaaattgagggtataataggaagaaaatgt 248950  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    | |||||||||||||| || |||| ||||||||||| ||||| ||||| ||||||||| ||||||||||    
T  248949 gtaaaaatacactttgctatttttatggaaattttctaaaacgacacttaaaaaggaatggagggagta 248881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 7 - 157
Target Start/End: Complemental strand, 17202025 - 17201875
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||||||| || || ||||| |||  || ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  17202025 ataacatattaaatttattggaaagataaagtttgtgtaaaaaaataggaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaa 17201926  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaagga 157  Q
    |||||| | | || |||| ||  ||||||| ||||  ||||| ||||||||    
T  17201925 atacacatcgctatttttatgttaattttctaaaaagacacttaaaaagga 17201875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 6428558 - 6428663
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||  |  ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  6428558 ataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataggaacttattggtggattaaaatgaaggtataatagaaagaaaatgtgcaaaa 6428657  T
Q  107 atacac 112  Q
    ||||||    
T  6428658 atacac 6428663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 1584179 - 1584278
Alignment:
Q  13 tattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||||||||||||||||||||||| |   |||| |||| || ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1584179 tattaaatttattggaaagataaagtgtgtgcagaaaaatagaaatttatcggtggattaaaatgagggtataatagaaagaaaatgtgcaaaaatacac 1584278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 32474640 - 32474749
Alignment:
Q  2 aaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtg 101  Q
    |||| ||||||||||||||||||||||||||||||||||  |  ||||| ||   || ||||| ||||||||| ||||||||||||||||||||||||||    
T  32474640 aaaagataacatattaaatttattggaaagataaagtgtttgcgaaaaaatatgaatttattgttggattaaaatgagggtataatagaaagaaaatgtg 32474739  T
Q  102 caaaaataca 111  Q
    ||||||||||    
T  32474740 caaaaataca 32474749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 28620517 - 28620682
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    ||||||||| |||||||||||||| |||||||| ||||| |  ||||| |||  |  ||| || |||||||| |||||||||||||| ||||||| ||||    
T  28620517 aaatataacttattaaatttattgaaaagataaggtgtgtgcaaaaaaataggaacttat-ggcggattaaaatgagggtataataggaagaaaaggtgc 28620615  T
Q  103 aaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaat 171  Q
    |||||||||| | ||||  ||||||  ||||||| ||||  ||||| ||||||||||||||||||||||    
T  28620616 aaaaatacacatcgtta--tttgtgttaattttctaaaaagacacttaaaaaggaacggagggagtaat 28620682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 8544276 - 8544164
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||| |||| ||||| |  |||||  ||  || ||||||||||||||| |||||||||||||  ||||||||||||||||    
T  8544276 ataacatattaaatttattggaaatataaggtgtgtgcaaaaaatcaggaatttattggtggattaaaatgagggtataatatgaagaaaatgtgcaaaa 8544177  T
Q  107 atacactttgtta 119  Q
    |||||| ||||||    
T  8544176 atacacattgtta 8544164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 20202161 - 20202320
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagta-gagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaat 108  Q
    ||||||||||||||||| |||||||||||||| |  ||||| || || || |||| ||| |||||| |||||||||||||| || |||||||||||||||    
T  20202161 acatattaaatttattgaaaagataaagtgtgtgcaaaaaaatatgaaat-tattagtgaattaaaatgagggtataataggaaaaaaatgtgcaaaaat 20202259  T
Q  109 acactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | || |||||||  ||  ||  ||||| ||||| ||||||||||||||||||||    
T  20202260 acacttagctatttttgtgttaaaattttaaaacgacacttaaaaaggaacggagggagta 20202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 36059695 - 36059592
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||||||| | |||||| |||  |  |||| |||||||||| |||||||||||||| || |||||||| |||||||    
T  36059695 acatattaaatttattggaaagataaagtgtgtg-caaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaaatgtgaaaaaata 36059597  T
Q  110 cactt 114  Q
    |||||    
T  36059596 cactt 36059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 39940267 - 39940167
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| |||||||||||||||||||||| ||||||| |  ||||| |||  || ||||||||||||||| |||||||||||||| |||||||||| |||||    
T  39940267 ataaaatattaaatttattggaaagatcaagtgtgtgaaaaaaa-taggaatttattggtggattaaaatgagggtataataggaagaaaatgtacaaaa 39940169  T
Q  107 at 108  Q
    ||    
T  39940168 at 39940167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 19804229 - 19804389
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||||||||||||||| ||||||||||||||||||    ||||| ||   || |||| || ||||||| |||||||| ||||| |||||||||| |    
T  19804229 aaatataacatattaaatttgttggaaagataaagtgtgtacaaaaaaataagaatttatttgtcgattaaaatgagggtagaataggaagaaaatgtac 19804328  T
Q  103 aaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
    |||||||||| ||| || ||| |||  ||||||| ||||  ||||| ||||| ||| ||||    
T  19804329 aaaaatacacattgctaatttagtgttaattttctaaaaagacacttaaaaatgaatggag 19804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 60 - 164
Target Start/End: Complemental strand, 39585447 - 39585343
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaac 159  Q
    ||||| ||||||||| |||||||||||||| |||||||||||||||||||||| | | || ||| |||  ||||||| ||||  ||||| ||||||||||    
T  39585447 tattgatggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacgtcgctattttggtgttaattttctaaaaagacacttaaaaaggaac 39585348  T
Q  160 ggagg 164  Q
    |||||    
T  39585347 ggagg 39585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13219960 - 13219847
Alignment:
Q  1 aaaaatataacatattaaatttattgg--aaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataataga--aagaaa 96  Q
    ||||| |||||||||||||||||||||  ||| |||||||||| |  ||||| |||| |||||||||||||||||| ||||||||| |||||  || ||     
T  13219960 aaaaagataacatattaaatttattggaaaaaaataaagtgtgtgcaaaaaaatagaaatatattggtggattaaa-tgagggtatgatagaagaaaaag 13219862  T
Q  97 atgtgcaaaaataca 111  Q
    |||||||||||||||    
T  13219861 atgtgcaaaaataca 13219847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 11825328 - 11825238
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaa 97  Q
    ||||||||||||||||||||  |||||||||| || | |||||| ||   ||||||| |||||||| |||||||||||||||| |||||||    
T  11825328 ataacatattaaatttattgagaagataaagtatgtgccaaaaaataagaatatatttgtggattacattgagggtataataggaagaaaa 11825238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 12436282 - 12436178
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||| ||||| ||| ||||||||||  | ||||| ||   || ||||||||||||||| |||| ||||||||  ||||||||||||||||    
T  12436282 ataacatattaaatatattgaaaaaataaagtgtgt-taaaaaaatatgaatttattggtggattaaaatgagtgtataatatgaagaaaatgtgcaaaa 12436184  T
Q  107 atacac 112  Q
    ||||||    
T  12436183 atacac 12436178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 36244603 - 36244539
Alignment:
Q  45 caaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||| |||| || ||||||||||||||| | || |||||||||||||||||||||||||||||    
T  36244603 caaaaaatagaaatttattggtggattaaaataagagtataatagaaagaaaatgtgcaaaaata 36244539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 1583993 - 1584091
Alignment:
Q  17 aaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaat---tgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||| ||||||||||||||| |  ||||| |||  || |||||||||||||| |   ||  |||||||||| ||||||||||||||||||||||    
T  1583993 aaatttattagaaagataaagtgtgtgcaaaaaaataggaatttattggtggattaattaaatggtggtataataggaagaaaatgtgcaaaaatacac 1584091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 112
Target Start/End: Complemental strand, 25612801 - 25612756
Alignment:
Q  66 tggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25612801 tggattaaat-gagggtataataggaagaaaatgtgcaaaaatacac 25612756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 11991827 - 11991722
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| |||| ||||||| || |  |||||  |   || | ||||| ||||||| ||| |||||| ||| ||||||||||||||||    
T  11991827 ataacatattaaatttattagaaatataaagtttgtgcaaaaaaacatgaattttttggtagattaaaatgaaggtatattaggaagaaaatgtgcaaaa 11991728  T
Q  107 atacac 112  Q
    ||||||    
T  11991727 atacac 11991722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 16366043 - 16366147
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagta-gagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaat 108  Q
    |||||||||||||||||||||||||||||||| |  ||||  || || || |||| |  ||||||| |||||||||||||| || ||| | |||||||||    
T  16366043 acatattaaatttattggaaagataaagtgtgcgcaaaaatatatgaaat-tattagaagattaaaatgagggtataataggaaaaaagtttgcaaaaat 16366141  T
Q  109 acactt 114  Q
    ||||||    
T  16366142 acactt 16366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 169
Target Start/End: Original strand, 17558305 - 17558453
Alignment:
Q  20 tttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgtta 119  Q
    ||||||||||| |||||||||| | |||||| |||  |  |||| |||||||||| ||||| |||||||| || ||  |||| |||||||||||| | ||    
T  17558305 tttattggaaatataaagtgtgtg-caaaaaataggaaattattagtggattaaaatgaggatataataggaaaaatgtgtgtaaaaatacacttcgcta 17558403  T
Q  120 cttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
     |||||||  ||  ||| ||||| ||||| |||||  |||||||||||||    
T  17558404 tttttgtgttaaaattctaaaacgacacttaaaaaaaaacggagggagta 17558453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 14967846 - 14967929
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataataga 90  Q
    |||||| |||||||||||| |||||| ||| |||| || ||||| || | || ||||||||||||||| | || ||||||||||    
T  14967846 ataacacattaaatttattcgaaagaaaaaatgtgtgtaaaaaaatataaatttattggtggattaaaattagagtataataga 14967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 42673621 - 42673551
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaa 74  Q
    ||||||||||||||||||||||| ||| ||||||||||| | |||||| ||   || |||||||||||||||    
T  42673621 aaatataacatattaaatttattagaatgataaagtgtgtg-caaaaaataagaatttattggtggattaaa 42673551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 19133110 - 19133072
Alignment:
Q  76 tgagggtataatagaaagaaaatgtgcaaaaatacactt 114  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  19133110 tgagggtataatagaaagaaaatgtgtaaatatacactt 19133072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 32717697 - 32717580
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaac 159  Q
    |||| |||||||||  |||||||||||||| || ||| ||||| ||||||||||| | || |||||||  ||  ||| ||||| ||||| ||||||||||    
T  32717697 tattagtggattaacatgagggtataataggaaaaaagtgtgc-aaaatacacttcgctatttttgtgttaaaattctaaaacgacacttaaaaaggaac 32717599  T
Q  160 ggagggagtaatatctatg 178  Q
     |||||  |||||| ||||    
T  32717598 agaggggataatatttatg 32717580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 8e-51; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 21934056 - 21933890
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  21934056 aaaaatataacatattaaatttattggaaagataaagtgtgc--caaaaaatagagatatattagtggattaaattgagggtataatcgtaagaaaatgt 21933959  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||||||||||| || |||  || |||||||| ||||| ||||| ||||| ||||||||||||||    
T  21933958 gcaaaaatacactttgctattttcatgaaaattttctaaaacgacacttaaaaaagaacggagggagta 21933890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 38750608 - 38750445
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||| |||||||||||||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  38750608 aaaattataacatattaaatttattggaaagataaagtgtgtgccaaaaa-taaagatatattggtggattaaattgagagtataataggaagaaaatgt 38750510  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggaggg 165  Q
    |||||||||||||||| || |||  || |||||||| ||||| ||||| ||||||||||||||||    
T  38750509 gcaaaaatacactttgctattttcatgaaaattttctaaaacgacacttaaaaaggaacggaggg 38750445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 2599531 - 2599693
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||| ||  |  ||||||||   || ||||||||||||||| |||||||||||||| || |||||||||||||    
T  2599531 ataacatattaaatttattggaaagataaagagtctgcaaaaaagtatgaatttattggtggattaaaatgagggtataataggaataaaatgtgcaaaa 2599630  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||||| ||||  ||||| ||||||||||||||||||||    
T  2599631 atacacatcgctattttagtgttaattttctaaaaagacacttaaaaaggaacggagggagta 2599693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 169
Target Start/End: Original strand, 27817917 - 27818074
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||| ||||||||| |||| |  ||||| |||  || ||||||||||||||| | |||||||||||| || ||||||||||||||| ||    
T  27817917 atattaaatttattgaaaagataaaatgtgtgcaaaaaaataggaatttattggtggattaaaataagggtataataggaataaaatgtgcaaaaatgca 27818016  T
Q  112 ctttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    | | |||| |||||||  ||||||| |||| |||||| ||||||||||||| ||||||    
T  27818017 catcgttatttttgtgttaattttctaaaaaaacacttaaaaaggaacggatggagta 27818074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21916028 - 21916139
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||| |||  |||||||||||| ||||||||| |||   |||| ||||||||||    
T  21916028 aaaaatataaaatattaaatttattggaaagataaagtgtgtgtcaaaaaataggaatatattggtgggttaaattgaaggt---ataggaagaaaatgt 21916124  T
Q  101 gcaaaaatacacttt 115  Q
    ||||||||| |||||    
T  21916125 gcaaaaatatacttt 21916139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 16237138 - 16236976
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||| |||||||||||||| |||||||||||| |  | ||| |||  || ||||  ||||||||| |||||||||||||| ||||||||||| ||||    
T  16237138 ataacattttaaatttattggagagataaagtgtgtgcaagaaaataggaatttatttatggattaaaatgagggtataataggaagaaaatgtgaaaaa 16237039  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || |||||||  ||||||| ||||  ||||| ||||||||||||||||||||    
T  16237038 atacacatcgctatttttgtgttaattttctaaaaagacacttaaaaaggaacggagggagta 16236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 45647067 - 45647228
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||   || |||||  |||||||| |||||||||||||| |||||||||||||| |    
T  45647067 ataacatattaaatttattggaaagataaagtgtgtg-caaaaaatatgaatttattgacggattaaaatgagggtataataggaagaaaatgtgcaaga 45647165  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || |||| ||  ||||||| |||| |||||| ||||| |||||||| |||||    
T  45647166 atacacatcgctatttttatgttaattttctaaaaaaacacttaaaaatgaacggagagagta 45647228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 7259445 - 7259285
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaa-tgtgcaaaaat 108  Q
    ||||||||| |||||||||||||||||||| | |  ||||| || | |  |||| |||||||||| |||||||||||||| || |||| |||||||||||    
T  7259445 acatattaattttattggaaagataaagtgggtgcaaaaaaataaaaaattattagtggattaaaatgagggtataataggaaaaaaagtgtgcaaaaat 7259346  T
Q  109 acactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||| || |||||||  ||  ||| ||||| ||||| ||||||||||||||||||||    
T  7259345 acactttgctatttttgtgttaaaattctaaaacgacacttaaaaaggaacggagggagta 7259285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 37030521 - 37030369
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    ||||||||||||||||||||||||||||||||||||||  |  ||| | | || || |||| |||||||||| |||||||||| ||| ||||||||||||    
T  37030521 aaatataacatattaaatttattggaaagataaagtgtttgcaaaacaattgaaatttattagtggattaaaatgagggtatactaggaagaaaatgtgc 37030422  T
Q  103 a-aaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaa 154  Q
    | ||||||||||| || | |||||||  ||||||| |||| |||||| |||||    
T  37030421 aaaaaatacacttcgtgatttttgtgttaattttctaaaaaaacacttaaaaa 37030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 45759208 - 45759109
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||| | ||| |||||||||| || ||||| |||  || |||||||||||||||||||||||||||||| |||||||||| |||||    
T  45759208 ataacatattaaatttatggaaaaaataaagtgtgtgtaaaaaaatagtaatttattggtggattaaattgagggtataataggaagaaaatgtacaaaa 45759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 2094241 - 2094346
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||| ||| ||||||||||||||    ||||| |||| || |||||||||||||||  ||| ||||||||| ||||||||||||||||    
T  2094241 ataacatattaaattttttgaaaagataaagtgtgtccaaaaaaatagaaatttattggtggattaaaccgagagtataataggaagaaaatgtgcaaaa 2094340  T
Q  107 atacac 112  Q
    ||||||    
T  2094341 atacac 2094346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 25841603 - 25841492
Alignment:
Q  13 tattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    |||||||||||||||||||||||| ||||    ||||| |||  |  |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  25841603 tattaaatttattggaaagataaaatgtgt---aaaaaataggaaattattagtgaattaaaatgagggtataatagaaaaaaaatgtgcaaaaatacac 25841507  T
Q  113 tttgttacttttgtg 127  Q
    ||||||| |||||||    
T  25841506 tttgttatttttgtg 25841492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 157
Target Start/End: Original strand, 296929 - 297073
Alignment:
Q  13 tattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||| |||| ||||| |||||||| |  ||||| |||| ||||||||||||  |||| |||||||||| ||| |||||||||| |||||||||||    
T  296929 tattaaattaattgaaaagagaaagtgtgtgcaaaaaaatagaaatatattggtggtataaaatgagggtatagtaggaagaaaatgtacaaaaatacac 297028  T
Q  113 tttgttacttttgtggaaattttcgaaaacaacactaaaaaagga 157  Q
    || | || ||| |||  ||| ||| ||||| ||||| ||||||||    
T  297029 ttcgctattttggtgttaatattctaaaacgacacttaaaaagga 297073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 162
Target Start/End: Original strand, 34669155 - 34669307
Alignment:
Q  11 catattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatag-aaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||| ||| |||||||||  |  |||||||||| || ||||| ||||||||| |||| ||||||||| ||| ||||||||||||||||    
T  34669155 catattaaatttattgaaaaaataaagtgtctgcaaaaaagtagaaatttattgatggattaaaatgagagtataatagaaaaaaaaatgtgcaaaaata 34669254  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacgga 162  Q
    ||| | | || |||  ||  ||||||| |||| |||||| ||||| |||||||    
T  34669255 cacatcgctattttaatgttaattttccaaaaaaacacttaaaaaagaacgga 34669307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 5494089 - 5494198
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||| |||||||||||||||||||  ||||||||||||||||  |||||   || || |||||||||| ||||| |||| |||||||| ||||||||||    
T  5494089 aaaaagataacatattaaatttattataaagataaagtgtgagaaaaaaaaagga-atttattggtggagtaaat-gaggatataataggaagaaaatgt 5494186  T
Q  101 gcaaaaatacac 112  Q
    ||||||||||||    
T  5494187 gcaaaaatacac 5494198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 165
Target Start/End: Original strand, 9589230 - 9589391
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagag---atatattggtggattaaattgagggtataatagaaagaaaatgtgca 103  Q
    |||||||||||||||||||| ||||| ||||| || |  |||||  |||    |||||||||||||||||| |||||||| ||||| ||||||| |||||    
T  9589230 ataacatattaaatttattgaaaagagaaagtttgtgcaaaaaaaaagaaggtatatattggtggattaaaatgagggtacaataggaagaaaaagtgca 9589329  T
Q  104 aaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggaggg 165  Q
    ||||||||||||| || ||| |||  ||| ||| ||||  ||||| |||||  |||||||||    
T  9589330 aaaatacactttgctattttggtgttaatattctaaaatgacacttaaaaataaacggaggg 9589391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 633180 - 633073
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| ||||   |||||||| |  ||||||||   || ||||||||||||||| |||| ||||||| ||||||||||||| ||||    
T  633180 ataacatattaaatttattagaaaagaaaagtgtgtga-aaaaagtaagaatttattggtggattaaaatgagagtataattgaaagaaaatgtggaaaa 633082  T
Q  107 atacacttt 115  Q
    |||||||||    
T  633081 atacacttt 633073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 13779145 - 13779250
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||| ||| |  ||||| |||  |  |||| || ||||||| |||||||||||||| || ||||||| |||||| |    
T  13779145 acatattaaatttattggaaagataaagggtgtgcaaaaaaataggaaattattagtagattaaaatgagggtataataggaa-aaaatgtccaaaaaca 13779243  T
Q  110 cactttg 116  Q
    |||||||    
T  13779244 cactttg 13779250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 19229405 - 19229316
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaa 97  Q
    |||||||||||||||||||||||||| ||||| || | |||||| |||   |||||| |||||||||| |||||||||||||  |||||||    
T  19229405 ataacatattaaatttattggaaagagaaagtctgtg-caaaaaataggtgtatattagtggattaaaatgagggtataataagaagaaaa 19229316  T

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Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 376186 - 376305
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||| ||||||||| |||||||| |  ||||| || | |||||||| ||||||||| ||| ||||||| || |||||||  |  ||||    
T  376186 ataacatattaaatttgttggaaagagaaagtgtgtgcaaaaaaataaaaatatattgatggattaaaatga-ggtataacaggaagaaaagattaaaaa 376284  T
Q  107 atacactttgttacttttgtg 127  Q
    |||||||| | || |||||||    
T  376285 atacacttcgctatttttgtg 376305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 6472334 - 6472278
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttg 116  Q
    |||||||||||||||  |||||||||||||||| |||||||| ||||||||| ||||    
T  6472334 tattggtggattaaaacgagggtataatagaaaaaaaatgtgtaaaaatacattttg 6472278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 6749467 - 6749523
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttg 116  Q
    |||||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||||    
T  6749467 tattggtgcattaaaacgagggtataatagaaagaaaatgtgtaaaaatacattttg 6749523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 45667908 - 45667992
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaa 91  Q
    |||||||||||||||||||| |||||||||||||| |  | ||| ||   || ||||||||||||||| ||| ||||||||||||    
T  45667908 ataacatattaaatttattgaaaagataaagtgtgtgcaagaaaataagaatttattggtggattaaaatgaaggtataatagaa 45667992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 34823743 - 34823637
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||| ||||||||||||| | | |||||| |  |||||  ||| |||||| |||||||||||  |||||||| |||| |||||||| | |||||    
T  34823743 ataacatattgaatttattggaaaaagatagtgtgcgaaaaaaataaga-atatatcggtggattaaaacgagggtatgataggaagaaaatatacaaaa 34823645  T
Q  107 atacactt 114  Q
    ||||||||    
T  34823644 atacactt 34823637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42735171 - 42735061
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||| ||||||||||||||||||   |||||||||||||  |  ||||| |||  || ||||| ||||||||| | ||| |||||||||| ||||||||    
T  42735171 aaaaaaataacatattaaatttatcaaaaagataaagtgtatgcaaaaaaataggaatttattgatggattaaaat-aggatataatagaacgaaaatgt 42735073  T
Q  101 gcaaaaatacac 112  Q
     |||||||||||    
T  42735072 acaaaaatacac 42735061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 21959467 - 21959353
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||| ||||||| |||| |||||||||| |  ||||| |||  |  |||| |||||||||| |||||||||||||| || ||  |||||||||| |    
T  21959467 acatattatatttattagaaatataaagtgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaggtgtgcaaaaaga 21959368  T
Q  110 cactttgttactttt 124  Q
    ||||| |||| ||||    
T  21959367 cacttcgttattttt 21959353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 34824239 - 34824321
Alignment:
Q  77 gagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaac 159  Q
    |||||||| |||||||||||||||||||||||||||||   || ||| |||  ||| ||| ||||| ||||| ||||||||||    
T  34824239 gagggtatgatagaaagaaaatgtgcaaaaatacacttcactaatttggtgtgaatattctaaaacgacacttaaaaaggaac 34824321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 5482079 - 5482026
Alignment:
Q  82 tataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaatttt 135  Q
    |||||||| ||||||||||||||||||| |||||| || ||| |||||||||||    
T  5482079 tataataggaagaaaatgtgcaaaaataaactttgctattttcgtggaaatttt 5482026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 12568849 - 12568959
Alignment:
Q  3 aaatataacatattaaatttatt---ggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatg 99  Q
    |||||||| ||||||||||||||   ||||||| ||||  || || ||||| | || |||||||  |||||||||    ||||||||||  |||||||||    
T  12568849 aaatataatatattaaatttattattggaaagaaaaagcttgtgtaaaaaaatggaaatatattcatggattaaa----gggtataataagaagaaaatg 12568944  T
Q  100 tgcaaaaatacactt 114  Q
    |||||||||||||||    
T  12568945 tgcaaaaatacactt 12568959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 13545313 - 13545423
Alignment:
Q  3 aaatataacatattaaatttatt---ggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatg 99  Q
    |||||||| ||||||||||||||   ||||||| ||||  || || ||||| | || |||||||  |||||||||    ||||||||||  |||||||||    
T  13545313 aaatataatatattaaatttattattggaaagaaaaagcttgtgtaaaaaaatggaaatatattcatggattaaa----gggtataataagaagaaaatg 13545408  T
Q  100 tgcaaaaatacactt 114  Q
    |||||||||||||||    
T  13545409 tgcaaaaatacactt 13545423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 27264278 - 27264373
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||| |||||||||||||||| |||||| |  || || |||  || ||||||||||||||| | ||| |||||||| |||||||| | ||||||||    
T  27264278 attagatttattggaaagatatagtgtgtgcaaataaataggaatttattggtggattaaaattaggatataataggaagaaaatatacaaaaata 27264373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 1405410 - 1405464
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactt 114  Q
    |||| |||||||||| | |||||||||||| ||| ||| ||||||||||||||||    
T  1405410 tattagtggattaaaataagggtataataggaagtaaaagtgcaaaaatacactt 1405464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 26252161 - 26252000
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26252161 aaaaatataacatattaaatttattagaaagataaagtgtgtgccaaaaaatagagatatattggtg-attaaattgagggtataataggaagaaaatgt 26252063  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
     ||||||||||||||  || |||  ||||||||||| ||||| ||||| ||||||||||||||    
T  26252062 acaaaaatacactttactattttcatggaaattttctaaaacgacacttaaaaaggaacggag 26252000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 6026522 - 6026668
Alignment:
Q  16 taaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacacttt 115  Q
    ||||||||||||||||| |||||||| || |||||   || ||||||| |||||||||| |||| ||||||||||||||||| ||||||| |||||||||    
T  6026522 taaatttattggaaagagaaagtgtgtgtaaaaaatatga-atatattcgtggattaaaatgagagtataatagaaagaaaaagtgcaaacatacacttt 6026620  T
Q  116 gttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
    | || |||||||  ||| ||| ||||| ||||| ||||||||||||||    
T  6026621 gctatttttgtgttaatattctaaaacgacacttaaaaaggaacggag 6026668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 7972402 - 7972243
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||||||||||||||||| |||| |  ||||| |||  |  |||| |||||||||| ||||||||||||||||| ||| ||||||||||||    
T  7972402 acatattaaatttattggaaagataaaatgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtataatagaaaaaaagtgtgcaaaaata 7972303  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| |||| |||||||  ||  ||| |||||  |||| |||||| |||||||||||||    
T  7972302 cacttcgttatttttgtgttaaaattctaaaacgtcacttaaaaagaaacggagggagta 7972243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 2437372 - 2437273
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||  || ||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  2437372 ataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataggaatttattggtggattaaaatgatggtataataggaagaaaatgtgcaaaa 2437273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 14093354 - 14093252
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||| ||||||||||| |  ||||| ||||  | ||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  14093354 acatattaaatttattggaaggataaagtgtgtgcaaaaaaatagaagtttattgatggattaaaatgagggtataataggaagaaaatgtgcaaaaata 14093255  T
Q  110 cac 112  Q
    |||    
T  14093254 cac 14093252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 21527064 - 21526905
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||||||| |||||||||||||| |  ||||| |||  |  |||| |||||||||| ||||||| |||||| || ||| ||||||||||||    
T  21527064 acatattaaatttattgaaaagataaagtgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtgtaataggaaaaaagtgtgcaaaaata 21526965  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| | || |||||    ||  ||| ||||| ||||| ||||||||||||||||||||    
T  21526964 cacttcgctatttttgatttaaaattctaaaacgacacttaaaaaggaacggagggagta 21526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 23411005 - 23411107
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||| |||||||  |  ||||| |||  |||||||||||||||||| |||||||||||||| |  |||| ||||||||    
T  23411005 ataacatattaaatttattggaaagagaaagtgtatgcaaaaaaataggaatatattggtggattaaaatgagggtataataggatcaaaaagtgcaaaa 23411104  T
Q  107 ata 109  Q
    |||    
T  23411105 ata 23411107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 8049831 - 8049995
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagag--atatattggtggattaaattgagggtataatagaaagaaaatgtgcaa 104  Q
    |||||||||||||||||||||||| |||||||||| |  |||||  | |   || ||||||||||| ||| |||||||||||||| ||||||||||||||    
T  8049831 ataacatattaaatttattggaaatataaagtgtgtgcaaaaaaaaataagaatttattggtggatcaaaatgagggtataataggaagaaaatgtgcaa 8049930  T
Q  105 aaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||| |||| | | || ||| |||  ||||||  ||||  ||||  ||||||||||||||||||||    
T  8049931 aaacacacatcgctattttggtgttaattttttaaaaagacacataaaaaggaacggagggagta 8049995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 25057038 - 25057140
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||| |||||||||||||||||||||||||||| | |||||| ||   || ||||| ||||||||||||| |||||||||| ||||||||||  ||||    
T  25057038 ataacacattaaatttattggaaagataaagtgtgtg-caaaaaataagaatttattgatggattaaattgaaggtataataggaagaaaatgtataaaa 25057136  T
Q  107 atac 110  Q
    ||||    
T  25057137 atac 25057140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 31656114 - 31656169
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacacttt 115  Q
    |||||||  |||||| ||||||||||||||||||||||||||  ||||||||||||    
T  31656114 tattggtaaattaaaatgagggtataatagaaagaaaatgtgttaaaatacacttt 31656169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 6110712 - 6110662
Alignment:
Q  65 gtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacacttt 115  Q
    |||||||||| |||  ||||||||||||||||||||| |||||||||||||    
T  6110712 gtggattaaaatgaaagtataatagaaagaaaatgtgtaaaaatacacttt 6110662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 33890073 - 33890240
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    |||||||||||||  ||||||||||||||||||| ||||| |   ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |    
T  33890073 aaaaatataacat--taaatttattggaaagatagagtgtaataaaaaaaatagagatatattggtggattaaattgagggtataataggaagaaaatat 33890170  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaa 170  Q
    | ||||||||||||||||| ||| || ||||||||  ||||| ||||| |||||||||||||||||||||    
T  33890171 gtaaaaatacactttgttattttcgtagaaattttttaaaacgacacttaaaaaggaacggagggagtaa 33890240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 41503028 - 41503196
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||  || | ||||||||||||||||||||||||||||||||| ||||||||||    
T  41503028 aaaaatataacatattaaatttattagaaagataaagtgtgtgccaaaatatataaatatattggtggattaaattgagggtataataggaagaaaatgt 41503127  T
Q  101 gcaaaaatacactttgttactttt-gtggaaattttcgaaaacaacactaaaaaaggaacggagggagt 168  Q
    |||||||||||||||| || |||| |||||||||||  ||||  ||||| |||||||||  ||||||||    
T  41503128 gcaaaaatacactttgctatttttcgtggaaattttttaaaatgacacttaaaaaggaatcgagggagt 41503196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 17330891 - 17331055
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| |||||||||||||||||||||||||||||| |  ||||| |||  || ||||| || |||||| | |||||||||||| ||||||||||||||||    
T  17330891 ataatatattaaatttattggaaagataaagtgtgtgaaaaaaa-taggaatttattgatgcattaaaattagggtataataggaagaaaatgtgcaaaa 17330989  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaata 172  Q
    |||||| ||| || ||| |||  ||||||| ||||  |||||  |||||||||||||| |||||||    
T  17330990 atacacattgctattttggtgttaattttctaaaaagacacttcaaaaggaacggaggaagtaata 17331055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 19443189 - 19443032
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||||| ||||  | |||   |||| || ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  19443189 ataacatattaaatttattggaaagataaaatgtg--ttaaa---tagaaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaa 19443095  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||| || | ||||  || ||   ||||||| ||||  ||||| ||||||||||||||||||||    
T  19443094 atatacatcgttatcttggtattaattttctaaaaagacacttaaaaaggaacggagggagta 19443032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 24073485 - 24073372
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||||||||||||||||||| |||||||||||||| |  || || |||| || |||||||||||||||  ||| ||||| ||| ||||||||||||    
T  24073485 aaatataacatattaaatttattgaaaagataaagtgtgtgcaaagaaatagaaatttattggtggattaaaacgagagtatattaggaagaaaatgtgc 24073386  T
Q  103 aaaaatacactttg 116  Q
    ||||||||||||||    
T  24073385 aaaaatacactttg 24073372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 45666779 - 45666884
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||| |||| ||||||| |||||||||||||| |  ||||| |||  || ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  45666779 ataacatgttaattttattgaaaagataaagtgtgtgcaaaaaaataggaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaa 45666878  T
Q  107 atacac 112  Q
    ||||||    
T  45666879 atacac 45666884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 9808092 - 9808253
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| ||||||||||||||| | |||||| |||  || |||| |||||||||| ||||| |||||||| ||||||||||| ||||    
T  9808092 ataacatattaaatttattagaaagataaagtgtgtg-caaaaaataggaatttattagtggattaaaatgaggatataataggaagaaaatgtg-aaaa 9808189  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaat 171  Q
    |||||| | | || ||| |||  ||||||| ||||  ||| | ||||||||||||||||||||||    
T  9808190 atacacatcgctattttggtgttaattttctaaaa-gacatttaaaaaggaacggagggagtaat 9808253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38840049 - 38839943
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||| |||| |||||||||||||||||||||||| ||||| | |||||| |||| || ||||||||||||||| | ||| |||||||||||||||||||    
T  38840049 aaaaagataatatattaaatttattggaaagataaggtgtgtg-caaaaaatagaaatttattggtggattaaaattagg-tataatagaaagaaaatgt 38839952  T
Q  101 gcaaaaata 109  Q
    |||||||||    
T  38839951 gcaaaaata 38839943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 47944103 - 47943946
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| ||||||||||||||| |     || |||  || ||||||||||||||| |||||||||||||| ||||||||||||||||    
T  47944103 ataacatattaaatttattagaaagataaagtgtgtg-----aaataggaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaa 47944009  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||||  ||||  ||||| | ||||||| ||||||||||    
T  47944008 atacacatcgctattttggtgttaattttttaaaaagacacttacaaaggaatggagggagta 47943946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 50721408 - 50721569
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||| ||||||||||||||||| | |||||| || | || ||||||| |||| || | |||||||||||| |||||||||| |||||    
T  50721408 ataacatattaaatttagtggaaagataaagtgtgtg-caaaaactaaaaatttattggtagattgaaataagggtataataggaagaaaatgtacaaaa 50721506  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||| || ||| || ||| |||  ||||||  |||| || ||| |||||| |||||||||||||    
T  50721507 atatacattgctattttggtgttaattttttaaaataatacttaaaaagaaacggagggagta 50721569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 37209691 - 37209530
Alignment:
Q  8 taacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaa 107  Q
    ||||||||||||||||||| |||||||||||||| |  ||| | ||   || |||||| |||||||| | || |||| |||| |||||||||| ||||||    
T  37209691 taacatattaaatttattgaaaagataaagtgtgtgcaaaagaataagaatttattggcggattaaaataagagtatgataggaagaaaatgtacaaaaa 37209592  T
Q  108 tacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| | | || ||| |||| ||||||| ||||  ||||| ||||||||||||||||||||    
T  37209591 tacacatcgctattttggtggtaattttctaaaaagacacttaaaaaggaacggagggagta 37209530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 49299469 - 49299306
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataa-tagaaagaaaatgtgcaaa 105  Q
    |||||||||||||||||||||||| |||||||| | |  ||||| |||  || ||||| ||||||||| ||||||||||| | | || |||| |||||||    
T  49299469 ataacatattaaatttattggaaaaataaagtgagtgcaaaaaaatagtaatttattgatggattaaaatgagggtataattgggaaaaaaaagtgcaaa 49299370  T
Q  106 aatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||||| | | || |||||||  ||||||| ||||  ||||| |||||||| |||||||||||    
T  49299369 aatacacatcgctatttttgtgttaattttctaaaaagacacttaaaaaggagcggagggagta 49299306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 171
Target Start/End: Complemental strand, 38433985 - 38433825
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||||||| | |||||| |||  |  |||| |||||||||| |||||||||||||| || ||| | ||||||||||    
T  38433985 acatattaaatttattggaaagataaagtgtgtg-caaaaaataggaaattattagtggattaaaatgagggtataataggaaaaaagtttgcaaaaata 38433887  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaat 171  Q
     |||| | || |||||||  ||  ||  ||||| ||||| ||||||||||| | ||||||||    
T  38433886 tacttcgctatttttgtgttaaaattttaaaacgacacttaaaaaggaacgaatggagtaat 38433825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 170
Target Start/End: Complemental strand, 46430542 - 46430386
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacact 113  Q
    |||||||||||||||||||||||||||| |  ||||| |||| || ||||||| ||||||| |||| || |||||| |||||||| | |||||||||||     
T  46430542 attaaatttattggaaagataaagtgtgtgctaaaaaatagaaatttattggtagattaaaatgagagtgtaataggaagaaaatattcaaaaatacaca 46430443  T
Q  114 ttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaa 170  Q
    | |||| ||| |||  ||||||  ||||  ||||| ||||   ||||||||||||||    
T  46430442 tcgttattttggtgttaattttttaaaaagacacttaaaagaaaacggagggagtaa 46430386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 6949503 - 6949651
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||||              || |||||||||||||||  ||| ||||||||| |||||||||| |||||    
T  6949503 ataacatattaaatttattggaaagataaagtgtga--------------atttattggtggattaaagagagtgtataataggaagaaaatgtacaaaa 6949588  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | |||| ||| |||  ||||||| ||||  ||||| ||||||||||| ||||||||    
T  6949589 atacacatcgttaatttggtgttaattttctaaaaatacacttaaaaaggaacgaagggagta 6949651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 54982308 - 54982199
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaag-tagagatatattggtggattaaattgagggtataatagaaagaaaatgtg 101  Q
    ||||||||| |||| ||||||||||||||||||||| || |  |||||  |||| || ||||| ||||||||| |||||| ||||||||||||||| |||    
T  54982308 aaatataacttattgaatttattggaaagataaagtatgtgcaaaaaaaatagaaatttattg-tggattaaaatgagggcataatagaaagaaaacgtg 54982210  T
Q  102 caaaaatacac 112  Q
    |||||||||||    
T  54982209 caaaaatacac 54982199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 34031563 - 34031511
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  34031563 tattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacac 34031511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 1821217 - 1821057
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtgg---attaaattgagggtataatagaaagaaaatgtgca 103  Q
    ||||||||||||||||||||||||||||||||||| |     || ||   || |||||||||   |||||| |||||||||||||| |||||||||||||    
T  1821217 ataacatattaaatttattggaaagataaagtgtgtg-----aaatacgaatttattggtggtggattaaaatgagggtataataggaagaaaatgtgca 1821123  T
Q  104 aaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||||||| | | || ||| |||  ||||||  ||||  ||||| |||||||||  |||||||||    
T  1821122 aaaatacacatcgctattttggtgttaattttttaaaaagacacttaaaaaggaatagagggagta 1821057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 37371166 - 37371006
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagata--tattggtggattaaattgagggtataatagaaagaaaa--tgtgcaaaaa 107  Q
    ||||||||||||||| |||||||||||||| | ||||||  | ||  |  |||| |||||||||||||||||||||||||||| ||||  ||| ||||||    
T  37371166 atattaaatttattgaaaagataaagtgtgtg-caaaaaaaaaagtaaattattagtggattaaattgagggtataatagaaaaaaaaagtgttcaaaaa 37371068  T
Q  108 tacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||   || |||||||  ||  ||| ||||| ||||| ||||||||||||| ||||||    
T  37371067 tacacttcactatttttgtgttaaaattctaaaacgacacttaaaaaggaacggatggagta 37371006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 49263547 - 49263649
Alignment:
Q  14 attaaatttattggaaagataaa--gtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    |||||||||||||||||||||||  |||||||  |||||  ||  || |||| |||||||||| | ||||| |||||| |||||||||||||||||||||    
T  49263547 attaaatttattggaaagataaaatgtgtgagaaaaaaaaaaggaatttattagtggattaaaatcagggtctaataggaagaaaatgtgcaaaaataca 49263646  T
Q  112 ctt 114  Q
    |||    
T  49263647 ctt 49263649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 171
Target Start/End: Complemental strand, 38044355 - 38044230
Alignment:
Q  46 aaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaac 145  Q
    ||||| |||| || ||||||| ||||||| |||  ||| ||||  |||||||||||||||||||||| ||| || |||| ||  ||||||  |||| |||    
T  38044355 aaaaaatagaaatttattggttgattaaaatgaaagtacaataagaagaaaatgtgcaaaaatacacattgctatttttatgttaattttttaaaaaaac 38044256  T
Q  146 actaaaaaaggaacggagggagtaat 171  Q
    ||| |||||| |||||||||||||||    
T  38044255 acttaaaaagaaacggagggagtaat 38044230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 2685101 - 2685245
Alignment:
Q  15 ttaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactt 114  Q
    |||||||||||| ||||| |||||||    |||||| || | || ||||||||| ||||| ||| | |||||||  ||||||||||||||||||||||||    
T  2685101 ttaaatttattgaaaagagaaagtgtatcgcaaaaaataaaaatttattggtggtttaaaatgaagatataataagaagaaaatgtgcaaaaatacactt 2685200  T
Q  115 tgttacttttgtggaaattttcgaaaacaacactaaaaaaggaac 159  Q
    | ||| ||| | |  | | ||| |||||||| |||||||||||||    
T  2685201 tcttaatttagcgttactattccaaaacaacgctaaaaaaggaac 2685245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 9088838 - 9088730
Alignment:
Q  62 ttggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacgg 161  Q
    ||||||||||||| |||||||||||||| |||||||||||||| ||||||| | | || ||| |||  ||| ||| ||||  | ||| ||||||||||||    
T  9088838 ttggtggattaaaatgagggtataataggaagaaaatgtgcaagaatacacatcgctattttagtgttaatgttctaaaaagatacttaaaaaggaacgg 9088739  T
Q  162 agggagtaa 170  Q
    || ||||||    
T  9088738 agagagtaa 9088730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 55344059 - 55344161
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataata-gaaagaaaatgtgcaaaaat 108  Q
    |||||||||||||||| || |||||||||||| |  ||||  |||  |  |||| |||||||||| ||||||||||||| |||| |||||||||||||||    
T  55344059 acatattaaatttattagacagataaagtgtgtgcaaaaatataggaaattattagtggattaaaatgagggtataatatgaaaaaaaatgtgcaaaaat 55344158  T
Q  109 aca 111  Q
    |||    
T  55344159 aca 55344161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 53393838 - 53393978
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||||||||||||||||| |||||| | |||||||||||| |  ||| | |||  || ||  ||||||||||| | || ||| ||||  ||||||||||    
T  53393838 aaaaatataacatattaaaattattgaatagataaagtgtgtgcaaaataataggaatttaaaggtggattaaaataagagtagaatatgaagaaaatgt 53393937  T
Q  101 gcaaaaatacactttgttacttttgtggaaattttcgaaaa 141  Q
    |||||||||||| | | || |||||||  ||||||| ||||    
T  53393938 gcaaaaatacacctcgctagttttgtgttaattttctaaaa 53393978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46016522 - 46016413
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||| |||| ||| | ||||||||||||||| |||||||| |  |||||   || |||||||||||||||||| | || ||||||||||||| ||| ||    
T  46016522 aaaaagataatatactcaatttattggaaagagaaagtgtgtgaaaaaaatatga-atatattggtggattaaaataagagtataatagaaagtaaaggt 46016424  T
Q  101 gcaaaaataca 111  Q
     ||||||||||    
T  46016423 acaaaaataca 46016413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 46250321 - 46250430
Alignment:
Q  1 aaaaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgt 100  Q
    ||||| |||| ||| | ||||||||||||||| |||||||| |  |||||   || |||||||||||||||||| | || ||||||||||||| ||| ||    
T  46250321 aaaaagataatatactcaatttattggaaagagaaagtgtgtgaaaaaaatatga-atatattggtggattaaaataagagtataatagaaagtaaaggt 46250419  T
Q  101 gcaaaaataca 111  Q
     ||||||||||    
T  46250420 acaaaaataca 46250430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 53370150 - 53370080
Alignment:
Q  57 atatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtg 127  Q
    |||||||||| ||||| | ||| |||||||||| || |||| ||||||||||||||||| ||| |||||||    
T  53370150 atatattggttgattagaatgatggtataataggaataaaaggtgcaaaaatacactttattatttttgtg 53370080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 24538047 - 24538016
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtg 41  Q
    ||||||||||||||||||||||||||||||||    
T  24538047 acatattaaatttattggaaagataaagtgtg 24538016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 33809416 - 33809503
Alignment:
Q  28 aaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacacttt 115  Q
    ||||| |||||||| |  ||||| || | |||||||||||||||||| | |||||||| ||||||  ||| ||||||||||| |||||    
T  33809416 aaagagaaagtgtgtgcaaaaaattaaaaatatattggtggattaaaataagggtatattagaaaataaaggtgcaaaaatatacttt 33809503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 16197325 - 16197488
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||||||| |  | |||||| |||  || ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  16197325 ataacatattaaatttattggaaagataaagtttatg-caaaaaataggaatttattgatggattaaaatgagggtataatagaaagaaaatgtgcaaaa 16197423  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaat 171  Q
    |||||| |   || ||| |||  ||||||| ||||  ||||| ||||||||| ||||||||||||    
T  16197424 atacacatcactattttggtgttaattttctaaaaagacacttaaaaaggaatggagggagtaat 16197488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 27723757 - 27723918
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |     || |||| || ||||||||||||||| |||||||||||||| |||||||| |  ||||    
T  27723757 ataacatattaaatttattggaaagataaagtgtgtg-----aaatagaaatttattggtggattaaaatgagggtataataggaagaaaatatttaaaa 27723851  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaatat 173  Q
    ||| || | | || ||| |||  ||||||| ||||| |||||  |||||||||||||||||||||||    
T  27723852 atatacatcgctattttggtgttaattttctaaaacgacacttcaaaaggaacggagggagtaatat 27723918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 41690255 - 41690371
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||||||||||||||||||||||| ||||||| || |  |||||||||  || |||| ||| |||||| ||||||||||||| ||||||||||||     
T  41690255 aaatataacatattaaatttattggaaatataaagtttgtgctaaaaagtaggaatttattcgtgaattaaaatgagggtataataaaaagaaaatgtgt 41690354  T
Q  103 aaaaatacactttgtta 119  Q
    |||||||||||| ||||    
T  41690355 aaaaatacacttagtta 41690371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 4567853 - 4567962
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| ||   || || |||||||||||| ||||||||||||||||||| || |||     
T  4567853 aaatataacatattaaatttattggaaagataaagtgtgtg-caaaaaataagaatttagtggtggattaaaatgagggtataatagaaagataacgtgt 4567951  T
Q  103 aaaaatacact 113  Q
    |||||||||||    
T  4567952 aaaaatacact 4567962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 35792653 - 35792491
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| ||||||||||||||||   ||||| |||  || |||||||||| |||| |||||||||||||| || ||||| |||||||    
T  35792653 ataacatattaaatttattagaaagataaagtgtgaaataaaaaataggaatttattggtggagtaaa-tgagggtataataggaaaaaaatatgcaaaa 35792555  T
Q  107 atacactttgttacttttgtggaaattttc-gaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || |||||||  |||||||  |||| |||||  || |||||||||||||||||    
T  35792554 atacacatcgctatttttgtgttaattttctaaaaaaaacacataagaaggaacggagggagta 35792491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 57 - 162
Target Start/End: Original strand, 33258942 - 33259047
Alignment:
Q  57 atatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaagg 156  Q
    |||||||||||||||||| |||||||||||||| |||||||| | ||||||||||||| |||| ||| |||  ||| ||| ||||| ||||| |||||||    
T  33258942 atatattggtggattaaaatgagggtataataggaagaaaatctacaaaaatacacttcgttattttggtgttaatattctaaaacgacacttaaaaagg 33259041  T
Q  157 aacgga 162  Q
    ||||||    
T  33259042 aacgga 33259047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 14 - 169
Target Start/End: Complemental strand, 46671775 - 46671618
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataata-gaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||||||||||| |||||||||| |  ||||| |||| |  |||| |||| ||||| ||||||||||||| |||| ||| ||||||||||||| |    
T  46671775 attaaatttattggaaaaataaagtgtgtgcaaaaaaatagaaaattattagtggcttaaaatgagggtataataggaaaaaaattgtgcaaaaataccc 46671676  T
Q  113 tttgttacttttgtg-gaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||| || |||||||  |||  ||| ||||| ||||| ||||||||||||||||||||    
T  46671675 tttgctatttttgtgttaaaaattctaaaacgacacttaaaaaggaacggagggagta 46671618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 2798841 - 2798948
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||| |||||| |||||||| |  ||||| |||| |||||||||||||||| | | |||||||||||| ||| |||  |||||||    
T  2798841 ataacatattaaatttattagaaagagaaagtgtgtgcaaaaaaatagaaatatattggtggattagaataagggtataataggaagtaaagatgcaaaa 2798940  T
Q  107 atacactt 114  Q
    ||||||||    
T  2798941 atacactt 2798948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 3835398 - 3835236
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |  ||||| |||  || |||| |||||||||| ||||| |||||||| ||||||   || ||||    
T  3835398 ataacatattaaatttattggaaagataaagtgtgtgcaaaaaaataggaatttattcgtggattaaaatgaggatataataggaagaaatcatggaaaa 3835299  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || |||  ||| ||||||   ||| |||||| |||||||||| |||||||||    
T  3835298 atacacatcgctattttgatggtaatttttttaaaaaacacttaaaaaggaacagagggagta 3835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 39618171 - 39618269
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    ||||||||||||||||||||||| | || |  ||||| ||   || ||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  39618171 attaaatttattggaaagataaaatatgtgcaaaaaaataagaatttattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacac 39618269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 47541924 - 47542034
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaa---gtagagatatattggtggattaaattgagggtataatagaaagaaaatg 99  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||     ||| || ||||||||||||||| ||| |||||||||| ||||||| |    
T  47541924 aaatataacatattaaatttattggaaagataaagtgtgcgcaaaaaaaacagagaaatttattggtggattaaaatga-ggtataataggaagaaaacg 47542022  T
Q  100 tgcaaaaataca 111  Q
    ||||||||||||    
T  47542023 tgcaaaaataca 47542034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 14771174 - 14771015
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||| ||||||||| |||||||||||||| | |||||| |||  |  |||| |||||||||| ||||||||||||||| | ||| |||| |||||||    
T  14771174 acatatttaatttattgaaaagataaagtgtgtg-caaaaaataggaaattattagtggattaaaatgagggtataatagagaaaaagtgtgtaaaaata 14771076  T
Q  110 cactttgttacttttgtggaaattttcgaaaac-aacactaaaaaaggaacggagggagta 169  Q
    ||||||  || |||||||  ||  ||| |||||  ||||| ||||||||||||||||||||    
T  14771075 cactttactatttttgtgttaaaattctaaaactgacacttaaaaaggaacggagggagta 14771015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 15221626 - 15221467
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||| ||||||||| |||||||||||||| | |||||| |||  |  |||| |||||||||| ||||||||||||||| | ||| |||| |||||||    
T  15221626 acatatttaatttattgaaaagataaagtgtgtg-caaaaaataggaaattattagtggattaaaatgagggtataatagagaaaaagtgtgtaaaaata 15221528  T
Q  110 cactttgttacttttgtggaaattttcgaaaac-aacactaaaaaaggaacggagggagta 169  Q
    ||||||  || |||||||  ||  ||| |||||  ||||| ||||||||||||||||||||    
T  15221527 cactttactatttttgtgttaaaattctaaaactgacacttaaaaaggaacggagggagta 15221467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 39434426 - 39434586
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||||||| |   |||| |||  |  |||| || ||||||| | |||||||||||| || ||| ||||||||||||    
T  39434426 acatattaaatttattggaaagataaagtgtgtgcacaaaaataggaaattattagtcgattaaaataagggtataataggaaaaaagtgtgcaaaaata 39434525  T
Q  110 cactttgttacttttgt-ggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| | || ||||||   |||  ||| ||||| ||||| ||||||||||||||||||||    
T  39434526 cacttcgctatttttgtattaaaaattctaaaacgacacttaaaaaggaacggagggagta 39434586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 4962694 - 4962536
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||||||| | |||||| |||  |  |||| || ||||||| |||||||||||||| || ||| |||| |||||||    
T  4962694 acatattaaatttattggaaagataaagtgtgtg-caaaaaataggaaattattagttgattaaaatgagggtataataggaaaaaagtgtgaaaaaata 4962596  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    || ||   || |||||||  ||  ||| |||||  |||| ||||||||||||||||||||    
T  4962595 catttcactatttttgtgttaaaattctaaaacggcacttaaaaaggaacggagggagta 4962536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 158
Target Start/End: Original strand, 37124653 - 37124803
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| | ||||||  |   || |||| || ||||||| | |||||||||||| ||||||||||||||||    
T  37124653 ataacatattaaatttattggaaagataaagtgtgtg-caaaaaaaatgaatttatttgttgattaaaatcagggtataataggaagaaaatgtgcaaaa 37124751  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaa 158  Q
    | |||| ||| || |||  ||  ||||||| ||||  ||||| |||||||||    
T  37124752 acacacattgctattttgatgctaattttctaaaaagacacttaaaaaggaa 37124803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 15643633 - 15643734
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||||||||||||| |||| |  ||||| |||| |  |||| |||||||||| |||||||||||| | || ||||||||||||||||||    
T  15643633 atattaaatttattggaaagataaaatgtgtgcaaaaaaatagaaaattattagtggattaaaatgagggtataatcgtaa-aaaatgtgcaaaaataca 15643731  T
Q  112 ctt 114  Q
    |||    
T  15643732 ctt 15643734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 163
Target Start/End: Original strand, 43369023 - 43369176
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| ||||  | |||||| |  ||||| |||| ||||||| |||||||||| | ||||||||| || ||| ||| ||||||||    
T  43369023 ataacatattaaatttattgaaaag--agagtgtgtgcaaaaaaatagaaatatatttgtggattaaagtaagggtataacagtaagtaaaggtgcaaaa 43369120  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
     |||||||| ||| ||| |||  ||| ||| ||||| ||||| ||||||||||||||    
T  43369121 ttacacttt-ttaatttggtgttaatattctaaaacgacacttaaaaaggaacggag 43369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 10534570 - 10534415
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||  ||| ||||| |||| |  ||||| |||  || ||||||||||||||| ||| ||||||||| ||| |||| ||||||||    
T  10534570 ataacatattaaatttattaaaaaaataaaatgtgtgcaaaaaaataggaatttattggtggattaaaatgaaggtataata-aaaaaaaaagtgcaaaa 10534472  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggag 163  Q
    |||||| | |||| ||| |||  ||||||| ||||  ||| | ||||||||||||||    
T  10534471 atacacatcgttattttggtgttaattttctaaaaagacatttaaaaaggaacggag 10534415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 2271485 - 2271324
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||| ||||||||||||||| ||| |  ||| | ||   || || |||| ||||||| ||||| |||||||| ||||||||||||||||    
T  2271485 ataacatattaaatt-attggaaagataaagggtgtggaaaacaataagaatttagtggtagattaaaatgaggatataataggaagaaaatgtgcaaaa 2271387  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||| | ||||  ||||| |||||| |||||||||||||    
T  2271386 atacacatcgctattttggtgttaatttcctaaaaagacacttaaaaagaaacggagggagta 2271324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 28226789 - 28226951
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||||| | |||| |  ||| | |||  |||||||  ||||||||| | |||||||||||| ||| |||  | |||||    
T  28226789 ataacatattaaatttattggaaagatataatgtgtgcaaaacaataggaatatattattggattaaaataagggtataataggaagtaaagatacaaaa 28226888  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||| ||| ||||| ||||| ||||| ||||||||||||||    
T  28226889 atacacatcgctaatttggtgttaatattccaaaacgacacttaaaaatgaacggagggagta 28226951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 1752146 - 1752037
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaac 159  Q
    ||||| ||||||||  |||||||||||||||||||||||||| ||||||||||||  |||  || |||  | | ||| ||||||||||| ||||| ||||    
T  1752146 tattgatggattaacatgagggtataatagaaagaaaatgtgaaaaaatacacttccttaaattggtgttattattccaaaacaacacttaaaaaagaac 1752047  T
Q  160 ggagggagta 169  Q
    |||| |||||    
T  1752046 ggagtgagta 1752037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 17270080 - 17270246
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||| ||||||||| ||||| || || ||||||| |  |||||| |||  ||| |||| ||||||||| |||| |||||||||  | ||||||||     
T  17270080 aaatataatatattaaatatattgaaacgagaaagtgt-atacaaaaaataggaataaattgatggattaaaatgagagtataatagggaaaaaatgtgt 17270178  T
Q  103 aaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagtaa 170  Q
    ||||| ||||||  ||| ||| ||   ||||||| ||||| ||||| ||||||||||| |||||||||    
T  17270179 aaaaacacacttcattattttggtattaattttctaaaacgacacttaaaaaggaacgaagggagtaa 17270246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 8614657 - 8614563
Alignment:
Q  18 aatttattggaaagataaagtgtgagtcaaaaagtagag--atatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    |||||||| ||||||||||||||| | ||||||  ||||  || ||||||||||||||| ||| ||||||||| |||| |||||||| ||||||||    
T  8614657 aatttattagaaagataaagtgtgtg-caaaaaaaagaggaatttattggtggattaaaatgaaggtataataaaaagcaaatgtgctaaaataca 8614563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 12394778 - 12394826
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaat 108  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  12394778 tattggtggattaaaatgagagtataataggaagaaaatgtgcaaaaat 12394826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 27062069 - 27062002
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtg 127  Q
    |||| |||| ||||||||||||||||| ||||||||||| |||||||||| ||||  ||| |||||||    
T  27062069 tatttgtgggttaaattgagggtataacagaaagaaaatatgcaaaaatatacttccttaattttgtg 27062002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 88
Target Start/End: Complemental strand, 372481 - 372403
Alignment:
Q  9 aacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataata 88  Q
    |||||||||||||||||| ||||| ||||||||  | ||||| |||  |||||||||| ||||||| | |||||||||||    
T  372481 aacatattaaatttattg-aaagagaaagtgtgcataaaaaaatagcaatatattggtagattaaaataagggtataata 372403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 2273376 - 2273282
Alignment:
Q  14 attaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||| ||||| |||||||| |  ||||| |||  ||||||||||  |||||| | |||||||||||| ||| ||| |||||||||||    
T  2273376 attaaatttattgaaaagagaaagtgtgtgaaaaaaa-taggaatatattggtacattaaaataagggtataataggaagtaaaggtgcaaaaata 2273282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 41
Target Start/End: Original strand, 4678857 - 4678888
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtg 41  Q
    ||||||||||||||||||||||||||||||||    
T  4678857 acatattaaatttattggaaagataaagtgtg 4678888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 41
Target Start/End: Complemental strand, 24393840 - 24393809
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtg 41  Q
    ||||||||||||||||||||||||||||||||    
T  24393840 acatattaaatttattggaaagataaagtgtg 24393809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 29408475 - 29408315
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| |||||||||||||  |  ||||| ||   || | ||||||||||||| |||||||||||||||||||||||||||||||    
T  29408475 ataacatattaaatttattgaaaagataaagtgtatg--aaaaaataagaatttgttggtggattaaaatgagggtataatagaaagaaaatgtgcaaaa 29408378  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | |||| ||| |||  ||||||| |||| |||| | ||||||||||| | ||||||    
T  29408377 atacacatcgttattttggtgttaattttctaaaaaaacatttaaaaaggaacgaatggagta 29408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 41541645 - 41541802
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||| |||||||| |  ||| | ||   |||||||||||||||||| | |||||||||||| |||||||| |||||||    
T  41541645 ataacatattaaatttattggaaagagaaagtgtgtgaaaaagaataagaatatattggtggattaaaataagggtataataggaagaaaatatgcaaaa 41541744  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagg 164  Q
     |||||||||||| ||| |||  ||| ||| ||||||||| | |||||| || |||||    
T  41541745 gtacactttgttattttggtgttaatattctaaaacaacaattaaaaagaaatggagg 41541802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 169
Target Start/End: Original strand, 1397958 - 1398115
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||||||||||||||||||||||| |  |     |||  || ||||||||||||||| |||||||||||| | ||||||||||||||||    
T  1397958 ataacatattaaatttattggaaagataaagtgtgtgaga-----taggaatttattggtggattaaaatgagggtataattggaagaaaatgtgcaaaa 1398052  T
Q  107 atacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||| | | || ||| |||  ||||||| |||| |||||| | ||| ||||||||||||||    
T  1398053 atacacatcgctattttggtgttaattttctaaaaaaacacttacaaatgaacggagggagta 1398115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 166
Target Start/End: Complemental strand, 4959122 - 4958966
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||| ||||||||||||||||| |  |||||  ||  |  |||| |||||||||| |||||||||||||| || ||| |||||||| |||    
T  4959122 acatattaaatttaatggaaagataaagtgtgtgcaaaaaaaaaggaaattattagtggattaaaatgagggtataataggaaaaaagtgtgcaaagata 4959023  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggaggga 166  Q
    ||||||| || ||| |||  ||   || ||||||||||| |||||||||||||||||    
T  4959022 cactttgctattttagtgttaaaactctaaaacaacacttaaaaaggaacggaggga 4958966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 57 - 169
Target Start/End: Complemental strand, 20171010 - 20170898
Alignment:
Q  57 atatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaagg 156  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| | || ||   ||  ||| ||| ||||| ||||| ||| |||    
T  20171010 atatattggtggattaaaatgagggtataataggaagaaaatgtgcaaaaatacacttcgctatttcaatgttaatattctaaaacgacacttaaagagg 20170911  T
Q  157 aacggagggagta 169  Q
    |||||||||||||    
T  20170910 aacggagggagta 20170898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 45271979 - 45271885
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaa 107  Q
    |||||||||||||||||||||||||||||| | |||||| || | || || |||||||||||| |||||||||||||| |||||||||| ||||||    
T  45271979 atattaaatttattggaaagataaagtgtgtg-caaaaaataaaaatgtaatggtggattaaaatgagggtataataggaagaaaatgtacaaaaa 45271885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 7 - 112
Target Start/End: Complemental strand, 3309554 - 3309450
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    ||||||||||||||| |||| ||| ||||| |||| | ||||||||||  || ||||| || |||||| |||||||||||||| ||||||||||||||||    
T  3309554 ataacatattaaattgattgaaaatataaaatgtgtg-caaaaagtaggaatttattgatgaattaaaatgagggtataataggaagaaaatgtgcaaaa 3309456  T
Q  107 atacac 112  Q
    ||||||    
T  3309455 atacac 3309450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 11084370 - 11084478
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||||||||| |||||||| |  ||| | ||   |||||||||| ||||||| |||||||||||||| ||||||||||  ||||    
T  11084370 ataacatattaaatttattggaaagagaaagtgtgtgcaaaataatatgaatatattggtagattaaaatgagggtataataggaagaaaatgtataaaa 11084469  T
Q  107 atacacttt 115  Q
    | |||||||    
T  11084470 acacacttt 11084478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 169
Target Start/End: Complemental strand, 34424521 - 34424362
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    |||||||||||||||||||||||||||||||| |  || || |||  |  |||  |||||||||| | ||||||||||||||| ||| |||| |||||||    
T  34424521 acatattaaatttattggaaagataaagtgtgtgcaaagaaataggaaattatcagtggattaaaataagggtataatagaaaaaaagtgtgtaaaaata 34424422  T
Q  110 cactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||| | || |||||||  ||  ||  ||||| ||||| ||||||||||||| ||||||    
T  34424421 cacttcgctatttttgtgttaaaattttaaaacgacacttaaaaaggaacggatggagta 34424362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 12412943 - 12413100
Alignment:
Q  13 tattaaatttattggaaagataaagtgtgagtcaaaaagt-agagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||||||||||||||||| |  ||||| | ||| |  ||||  ||||||||| |||||||||||||| || ||| ||||||||||||||    
T  12412943 tattaaatttattggaaagataaagtgtgtgcaaaaaaattagaaaactattaatggattaaaatgagggtataataggaaaaaagtgtgcaaaaataca 12413042  T
Q  112 ctttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||| | |  |||||||  ||  ||| ||||| ||||| |||||||||| |||| ||||    
T  12413043 cttcgctttttttgtgttaaaattctaaaacgacacttaaaaaggaacagaggaagta 12413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 169
Target Start/End: Original strand, 12425003 - 12425160
Alignment:
Q  13 tattaaatttattggaaagataaagtgtgagtcaaaaagt-agagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||||||||||||||||| |  ||||| | ||| |  ||||  ||||||||| |||||||||||||| || ||| ||||||||||||||    
T  12425003 tattaaatttattggaaagataaagtgtgtgcaaaaaaattagaaaactattaatggattaaaatgagggtataataggaaaaaagtgtgcaaaaataca 12425102  T
Q  112 ctttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||| | |  |||||||  ||  ||| ||||| ||||| |||||||||| |||| ||||    
T  12425103 cttcgctttttttgtgttaaaattctaaaacgacacttaaaaaggaacagaggaagta 12425160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 25713958 - 25713867
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagag--atatattggtggattaaattgagggtataatagaaagaaaa 97  Q
    |||||||||||||||||||||||||| |||||||| | ||||||  | ||  |||||||||||||||||| |||||||||||||| |||||||    
T  25713958 ataacatattaaatttattggaaagagaaagtgtgtg-caaaaaaaaaaggaatatattggtggattaaaatgagggtataataggaagaaaa 25713867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 33660597 - 33660760
Alignment:
Q  3 aaatataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgc 102  Q
    |||||||| |||||||||||||| |||||| ||||  || |  ||||| ||| || | || |||| |||||| |||| |||||||| |||||||| ||||    
T  33660597 aaatataatatattaaatttattagaaagagaaagcctgtgcaaaaaaatag-ga-acatgggtgaattaaaatgagagtataatacaaagaaaaggtgc 33660694  T
Q  103 aaaaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagt 168  Q
    |||||||||||||| || ||||||   ||| ||| ||||| ||||| ||||||||||||| |||||    
T  33660695 aaaaatacactttgctatttttgtattaatattctaaaacgacacttaaaaaggaacggatggagt 33660760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 42872048 - 42871943
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaa-agtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaa 105  Q
    ||||||||||||||||||| ||  || ||||||||   ||||| | |||  |||||||||||||||||| ||||||||| |||| |||||||| ||||||    
T  42872048 ataacatattaaatttattagagtgagaaagtgtg---caaaataataggaatatattggtggattaaaatgagggtatgataggaagaaaatatgcaaa 42871952  T
Q  106 aatacactt 114  Q
    |||||||||    
T  42871951 aatacactt 42871943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 162
Target Start/End: Original strand, 27746964 - 27747112
Alignment:
Q  12 atattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||||||| |||||||||| |  ||||| |||  |  |||| |||||||||| ||||||||||||||||  |||| |||||||||||      
T  27746964 atattaaatttattggaaaaataaagtgtgtgcaaaaaaataggaaattattagtggattaaaatgagggtataatagaa--aaaaagtgcaaaaatatg 27747061  T
Q  112 ctttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacgga 162  Q
    ||| | || ||||||   ||  ||| ||||| ||||| |||||||||||||    
T  27747062 cttagctatttttgttttaaaattctaaaacgacacttaaaaaggaacgga 27747112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 44898655 - 44898762
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| ||||||||||||||  ||||  ||||||| ||  ||||| ||   || ||||||||||||||| ||||||||||||||||| |||||||| | ||    
T  44898655 ataatatattaaatttattaaaaagggaaagtgtaagaaaaaaaataagaatttattggtggattaaaatgagggtataatagaaataaaatgtgtagaa 44898754  T
Q  107 atacactt 114  Q
    ||||||||    
T  44898755 atacactt 44898762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 36243659 - 36243578
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatag 89  Q
    |||||||||||||||||||||||||| ||||||| |  |||||| |||  ||| |||||| ||||||| ||||||||||||||    
T  36243659 ataacatattaaatttattggaaagagaaagtgt-atgcaaaaaataggaatacattggttgattaaaatgagggtataatag 36243578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 169
Target Start/End: Complemental strand, 25713640 - 25713477
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagag--atatattggtggattaaattgagggtataatagaaagaaaatgtgcaa 104  Q
    ||||||| ||||| |||||||||||| ||||||||  |||||||  | ||  |||||||| | ||||||| |||||||||||||| |||||||  || ||    
T  25713640 ataacatgttaaaattattggaaagagaaagtgtgt-tcaaaaataaaaggaatatattgttagattaaaatgagggtataataggaagaaaaactgaaa 25713542  T
Q  105 aaatacactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    |||||||||| |||| ||| |||  ||| ||  ||||| ||| | ||||||||| ||| ||||||    
T  25713541 aaatacacttcgttattttagtgttaatattttaaaacgacatttaaaaaggaatggaaggagta 25713477  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 16806128 - 16806077
Alignment:
Q  61 attggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    |||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  16806128 attggtggattaaaattagggtataataggaagaaaacgtgcaaaaatacac 16806077  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 16845409 - 16845358
Alignment:
Q  61 attggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacac 112  Q
    |||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  16845409 attggtggattaaaattagggtataataggaagaaaacgtgcaaaaatacac 16845358  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 4317144 - 4317198
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactt 114  Q
    ||||||||||||||| | ||| |||||||||||||||||||  ||||||||||||    
T  4317144 tattggtggattaaaataaggatataatagaaagaaaatgtagaaaaatacactt 4317198  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 15507978 - 15508032
Alignment:
Q  57 atatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    |||||||||||||||||| ||| |||||||||| |||||| || |||||||||||    
T  15507978 atatattggtggattaaaatgaaggtataataggaagaaagtgagcaaaaataca 15508032  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 16806171 - 16806137
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtg 41  Q
    |||||||||||||||||||||||||||||||||||    
T  16806171 ataacatattaaatttattggaaagataaagtgtg 16806137  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 16845452 - 16845418
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtg 41  Q
    |||||||||||||||||||||||||||||||||||    
T  16845452 ataacatattaaatttattggaaagataaagtgtg 16845418  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 109
Target Start/End: Original strand, 21253054 - 21253155
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagata--tattggtggattaaattgagggtataatagaaagaaaatgtgcaa 104  Q
    |||||||||||||||||||| |||||||||||||| | ||||||  | | |||  ||||||||||||||| ||| ||||||||  ||| ||||| |||||    
T  21253054 ataacatattaaatttattgaaaagataaagtgtgtg-caaaaaaaaaaaatatttattggtggattaaaatgaaggtataat--aaaaaaaatatgcaa 21253150  T
Q  105 aaata 109  Q
    |||||    
T  21253151 aaata 21253155  T

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Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 98
Target Start/End: Complemental strand, 25965394 - 25965306
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatat-attggtggattaaattgagggtataatagaaagaaaat 98  Q
    |||||||||||||||||||||||||||||||| || |||||  |  || || ||| |||||||||| |||||||||||||| || |||||    
T  25965394 acatattaaatttattggaaagataaagtgtgtgtaaaaaaaaaaggaaataattagtggattaaa-tgagggtataataggaaaaaaat 25965306  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 157695 - 157645
Alignment:
Q  66 tggattaaattgagggtataatagaaagaaaatgtgcaaaaatacactttg 116  Q
    ||||||||| ||||| |||||||| ||||||||||| ||||||| ||||||    
T  157695 tggattaaaatgaggatataataggaagaaaatgtgtaaaaatatactttg 157645  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 43043236 - 43043335
Alignment:
Q  13 tattaaatttattggaa-agataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||||||||||||| ||| || |||||   |||||| |||  |||||| | |||||| || | || ||||||||||||  |||||||||||||||||    
T  43043236 tattaaatttattggaagagaaaacgtgtg---caaaaaataggaatatatcgatggattgaaataagagtataatagaaaataaatgtgcaaaaataca 43043332  T

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Target: scaffold1986 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 617 - 722
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||| | |||||||||||||||||||||||| || ||||| |||| || ||||||||||||||| | |||||||||||||||||||||||| ||||    
T  617 ataacatacttaatttattggaaagataaagtgtgtgtaaaaaaatagaaatttattggtggattaaaattagggtataatagaaagaaaatgtgtaaaa 716  T
Q  107 atacac 112  Q
     |||||    
T  717 gtacac 722  T

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Target: scaffold1327 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 1248 - 1352
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| |||||||||||||| |||||||| || | || ||||||| ||||||| |||| | ||||||| |||||||||| |||||    
T  1248 ataacatattaaatttattgaaaagataaagtgtgtgtcaaaaaataaaaatttattggt-gattaaaatgagagcataataggaagaaaatgtacaaaa 1346  T
Q  107 atacac 112  Q
    ||||||    
T  1347 atacac 1352  T

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Target: scaffold0005 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 7 - 112
Target Start/End: Original strand, 257259 - 257364
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||||||||||||||||||| |||||||||||||| |  ||||| |||  || ||||| ||||||||  |||||||||||||| ||||||||||| ||||    
T  257259 ataacatattaaatttattgaaaagataaagtgtgtgcaaaaaaataggaatttattgatggattaatatgagggtataataggaagaaaatgtgtaaaa 257358  T
Q  107 atacac 112  Q
    ||||||    
T  257359 atacac 257364  T

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Target: scaffold1130 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 169
Target Start/End: Original strand, 707 - 866
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaa-tgtgcaaaaat 108  Q
    ||||||||||||||||||||||||||| |||  |  |||||   || || |||| || |||||||||||||||||||||| || |||| |||||||||||    
T  707 acatattaaatttattggaaagataaaatgtttgcaaaaaaaaggaaat-tattagtagattaaattgagggtataataggaaaaaaagtgtgcaaaaat 805  T
Q  109 acactttgttacttttgtggaaattttcgaaaacaacactaaaaaaggaacggagggagta 169  Q
    ||||||| ||| |||| ||  ||  ||  ||||| ||||| ||||||||||||||||||||    
T  806 acacttttttatttttatgttaaaattataaaacgacacttaaaaaggaacggagggagta 866  T

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Target: scaffold0841 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0841
Description:

Target: scaffold0841; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 4295 - 4183
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaa 106  Q
    |||| ||||||||||||||||||||| |||||||| |  |||||  ||  |||||||||||||||||| |||||||||||||| |||||||  | |||||    
T  4295 ataatatattaaatttattggaaagagaaagtgtgtgcaaaaaaaaaggaatatattggtggattaaaatgagggtataataggaagaaaaactacaaaa 4196  T
Q  107 atacactttgtta 119  Q
    ||| |||| ||||    
T  4195 atatacttcgtta 4183  T

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Target: scaffold0841; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 3978 - 3865
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagtagag--atatattggtggattaaattgagggtataatagaaagaaaatgtgcaa 104  Q
    ||||||| |||||||||||||||||| |||||||| | ||||||  | ||  |||||||| | ||||||| |||||||||||||| |||||||  || ||    
T  3978 ataacatgttaaatttattggaaagagaaagtgtgtg-caaaaaaaaaaggaatatattgttagattaaaatgagggtataataggaagaaaaactgaaa 3880  T
Q  105 aaatacactttgtta 119  Q
    |||||||||| ||||    
T  3879 aaatacacttcgtta 3865  T

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Target: scaffold0188 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 7 - 116
Target Start/End: Complemental strand, 5745 - 5635
Alignment:
Q  7 ataacatattaaatttattggaaagataaagtgtgagtcaaaaagt-agagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaa 105  Q
    |||||||||||||||||||| ||||| |||||||| |  ||||| | ||  ||||||| ||| |||||| ||| |||||||| | |||||||||||||||    
T  5745 ataacatattaaatttattgaaaagagaaagtgtgtgcaaaaaaattaggaatatattagtgaattaaaatgatggtataattggaagaaaatgtgcaaa 5646  T
Q  106 aatacactttg 116  Q
    |||||||||||    
T  5645 aatacactttg 5635  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 184588 - 184639
Alignment:
Q  60 tattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaataca 111  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||    
T  184588 tattggtagattaaaatgagggtataatagaaaaaaaatgtgcaaaaataca 184639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 48629 - 48529
Alignment:
Q  10 acatattaaatttattggaaagataaagtgtgagtcaaaaagtagagatatattggtggattaaattgagggtataatagaaagaaaatgtgcaaaaata 109  Q
    ||||||||||||||||| ||| ||| |||||| |  ||||| |||| |  ||||  ||||||||| ||||||||||||||||| |||||||| |||||||    
T  48629 acatattaaatttattgaaaaaatatagtgtgtgcaaaaaaatagaaaattattaatggattaaaatgagggtataatagaaa-aaaatgtgtaaaaata 48531  T
Q  110 ca 111  Q
    ||    
T  48530 ca 48529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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