View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6301_high_21 (Length: 250)
Name: NF6301_high_21
Description: NF6301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6301_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 33905643 - 33905885
Alignment:
| Q |
1 |
tggtcttcatttgaagaaaccttttgtagtttcatttctttcttatcttttcccctttagaattgaaaaatatttaagatgtaacactatctattgtagt |
100 |
Q |
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| T |
33905643 |
tggtcttcatttgaagaaaccttttgtagtttcatttctttcttatcttttcccctttagaattgaaaaatatttaagatgtaacactatctattgtagt |
33905742 |
T |
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| Q |
101 |
tgtatttttatgtgtatgtgtgtggatagatttggtgttttatcattgagagctttcatgaagttgtctagtctctaacactccaatgagacataccttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33905743 |
tgtatttttatgtgtatgtgtgtggatagatttggtgttttatcattgagagctttcatgaagttgtctagtctctaacactccaatgagacataccttc |
33905842 |
T |
|
| Q |
201 |
caaccatctgcagctgaaataataacccatcattattcatctc |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33905843 |
caaccatctgcagctgaaataataacccatcattattcatctc |
33905885 |
T |
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