View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6301_low_7 (Length: 460)

Name: NF6301_low_7
Description: NF6301
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6301_low_7
NF6301_low_7
[»] chr3 (58 HSPs)
chr3 (158-302)||(35610821-35610966)
chr3 (215-302)||(39091329-39091416)
chr3 (221-304)||(27825691-27825773)
chr3 (221-303)||(33785847-33785928)
chr3 (222-295)||(19439528-19439601)
chr3 (158-216)||(447158-447216)
chr3 (165-209)||(24595236-24595280)
chr3 (1-39)||(18546435-18546473)
chr3 (170-216)||(20871350-20871396)
chr3 (1-39)||(38560077-38560115)
chr3 (1-42)||(5154880-5154921)
chr3 (221-302)||(8504202-8504282)
chr3 (167-216)||(27462140-27462189)
chr3 (1-42)||(39825627-39825668)
chr3 (1-42)||(55120799-55120840)
chr3 (1-41)||(7014912-7014952)
chr3 (1-41)||(13207680-13207720)
chr3 (166-209)||(51308823-51308866)
chr3 (284-339)||(52737792-52737847)
chr3 (1-39)||(5047228-5047266)
chr3 (1-39)||(7014790-7014828)
chr3 (1-39)||(8764085-8764123)
chr3 (1-39)||(12998759-12998797)
chr3 (170-216)||(20868712-20868758)
chr3 (1-39)||(21802273-21802311)
chr3 (1-39)||(37585821-37585859)
chr3 (1-39)||(39825505-39825543)
chr3 (1-39)||(39937077-39937115)
chr3 (1-39)||(49817661-49817699)
chr3 (1-39)||(54014618-54014656)
chr3 (1-42)||(2985986-2986027)
chr3 (1-42)||(5047350-5047391)
chr3 (1-42)||(7862581-7862622)
chr3 (1-42)||(15539939-15539980)
chr3 (1-42)||(16871357-16871398)
chr3 (1-42)||(24721303-24721344)
chr3 (1-42)||(37585697-37585738)
chr3 (1-41)||(13207551-13207591)
chr3 (1-39)||(2148581-2148619)
chr3 (1-39)||(3526725-3526763)
chr3 (1-39)||(7731455-7731493)
chr3 (1-39)||(9268759-9268797)
chr3 (1-39)||(11915027-11915065)
chr3 (1-39)||(12998884-12998922)
chr3 (1-39)||(16343697-16343735)
chr3 (289-335)||(20868834-20868880)
chr3 (1-39)||(21015426-21015464)
chr3 (1-39)||(23043059-23043097)
chr3 (1-39)||(25024984-25025022)
chr3 (1-39)||(25484177-25484215)
chr3 (1-39)||(26996083-26996121)
chr3 (1-39)||(30751238-30751276)
chr3 (1-39)||(30751363-30751401)
chr3 (1-39)||(54014742-54014780)
chr3 (1-42)||(15540060-15540101)
chr3 (1-42)||(21802395-21802436)
chr3 (282-335)||(51306479-51306532)
chr3 (1-41)||(49817782-49817822)
[»] chr8 (36 HSPs)
chr8 (158-339)||(4676154-4676335)
chr8 (158-302)||(4678099-4678243)
chr8 (221-335)||(26174323-26174437)
chr8 (211-302)||(11080221-11080312)
chr8 (239-335)||(7277716-7277812)
chr8 (163-215)||(31909187-31909238)
chr8 (170-210)||(12062802-12062842)
chr8 (165-209)||(35416184-35416228)
chr8 (211-296)||(37892-37976)
chr8 (1-39)||(2672162-2672200)
chr8 (1-39)||(17159296-17159334)
chr8 (1-39)||(23352186-23352224)
chr8 (221-275)||(26175468-26175522)
chr8 (1-39)||(28004701-28004739)
chr8 (1-39)||(28062003-28062041)
chr8 (1-42)||(7595413-7595454)
chr8 (1-42)||(15113936-15113977)
chr8 (1-42)||(18845103-18845144)
chr8 (1-39)||(116804-116842)
chr8 (1-39)||(5385590-5385628)
chr8 (1-39)||(5385715-5385753)
chr8 (1-39)||(6162983-6163021)
chr8 (1-39)||(16669317-16669355)
chr8 (1-39)||(17159172-17159210)
chr8 (1-39)||(18609331-18609369)
chr8 (1-39)||(22980995-22981033)
chr8 (1-39)||(23943167-23943205)
chr8 (1-39)||(28004827-28004865)
chr8 (1-39)||(28062129-28062167)
chr8 (1-39)||(40774035-40774073)
chr8 (1-39)||(42933233-42933271)
chr8 (1-39)||(43681276-43681314)
chr8 (5-39)||(43681401-43681435)
chr8 (1-42)||(116678-116719)
chr8 (1-42)||(37597763-37597804)
chr8 (3-39)||(28898925-28898961)
[»] chr5 (52 HSPs)
chr5 (158-303)||(39040538-39040683)
chr5 (211-339)||(35309110-35309238)
chr5 (211-300)||(31185993-31186080)
chr5 (221-302)||(27405306-27405386)
chr5 (213-302)||(35304676-35304765)
chr5 (221-302)||(25213827-25213907)
chr5 (221-302)||(25277977-25278057)
chr5 (211-302)||(43233871-43233963)
chr5 (1-41)||(6802259-6802299)
chr5 (263-335)||(21254247-21254319)
chr5 (1-42)||(30126629-30126670)
chr5 (158-210)||(18587463-18587515)
chr5 (1-39)||(5081661-5081699)
chr5 (1-39)||(6143376-6143414)
chr5 (1-39)||(10690855-10690893)
chr5 (1-39)||(12369650-12369688)
chr5 (1-39)||(13892626-13892664)
chr5 (1-39)||(13892751-13892789)
chr5 (1-39)||(18805349-18805387)
chr5 (1-39)||(20352819-20352857)
chr5 (1-39)||(21262790-21262828)
chr5 (1-39)||(23294692-23294730)
chr5 (1-39)||(27830016-27830054)
chr5 (1-39)||(39886574-39886612)
chr5 (1-39)||(40616383-40616421)
chr5 (1-42)||(16867943-16867984)
chr5 (1-42)||(22634178-22634219)
chr5 (1-42)||(38678360-38678401)
chr5 (1-41)||(19635034-19635074)
chr5 (1-33)||(22833457-22833489)
chr5 (1-41)||(25591163-25591203)
chr5 (1-36)||(14946593-14946628)
chr5 (1-39)||(8405979-8406017)
chr5 (1-39)||(8406104-8406142)
chr5 (1-39)||(11762309-11762347)
chr5 (1-39)||(12369525-12369563)
chr5 (1-39)||(18618319-18618357)
chr5 (1-39)||(20352694-20352732)
chr5 (1-39)||(20884220-20884258)
chr5 (1-39)||(21000415-21000453)
chr5 (1-39)||(21000540-21000578)
chr5 (1-39)||(26006700-26006738)
chr5 (1-39)||(26404942-26404980)
chr5 (1-39)||(27451357-27451395)
chr5 (1-39)||(37064406-37064444)
chr5 (1-39)||(39886699-39886737)
chr5 (1-42)||(5105161-5105202)
chr5 (1-42)||(21262665-21262706)
chr5 (1-42)||(26006574-26006615)
chr5 (8-41)||(27316190-27316223)
chr5 (1-42)||(29989525-29989566)
chr5 (164-208)||(27172922-27172965)
[»] scaffold0263 (1 HSPs)
scaffold0263 (212-302)||(22958-23048)
[»] chr2 (58 HSPs)
chr2 (211-310)||(36316276-36316375)
chr2 (211-302)||(6016847-6016936)
chr2 (221-295)||(12015132-12015206)
chr2 (239-339)||(24038338-24038438)
chr2 (164-216)||(26608095-26608147)
chr2 (1-39)||(22422947-22422985)
chr2 (1-39)||(42335994-42336032)
chr2 (1-42)||(33216571-33216612)
chr2 (1-42)||(39615766-39615807)
chr2 (1-39)||(397002-397040)
chr2 (1-39)||(5863247-5863285)
chr2 (1-39)||(5863373-5863411)
chr2 (1-39)||(7511533-7511571)
chr2 (1-39)||(7515817-7515855)
chr2 (1-39)||(12883268-12883306)
chr2 (1-39)||(18817374-18817412)
chr2 (1-39)||(20891781-20891819)
chr2 (1-39)||(20962105-20962143)
chr2 (1-39)||(22265322-22265360)
chr2 (1-39)||(40926865-40926903)
chr2 (1-39)||(43209363-43209401)
chr2 (1-39)||(44353963-44354001)
chr2 (1-42)||(1320664-1320705)
chr2 (1-42)||(5529108-5529149)
chr2 (1-42)||(8972849-8972890)
chr2 (1-42)||(18966863-18966904)
chr2 (1-41)||(20100820-20100860)
chr2 (1-40)||(20513853-20513892)
chr2 (1-39)||(1151340-1151378)
chr2 (1-39)||(5513544-5513582)
chr2 (1-39)||(5513669-5513707)
chr2 (1-39)||(7511408-7511446)
chr2 (1-39)||(7515692-7515730)
chr2 (1-39)||(12883143-12883181)
chr2 (1-39)||(14274286-14274324)
chr2 (1-39)||(18756827-18756865)
chr2 (1-39)||(18966741-18966779)
chr2 (1-39)||(20100945-20100983)
chr2 (1-39)||(20513730-20513768)
chr2 (1-39)||(22265196-22265234)
chr2 (1-39)||(25890733-25890771)
chr2 (1-39)||(26502425-26502463)
chr2 (1-39)||(27927119-27927157)
chr2 (1-39)||(28192358-28192396)
chr2 (1-39)||(28192483-28192521)
chr2 (1-39)||(30462368-30462406)
chr2 (1-39)||(34963539-34963577)
chr2 (2-40)||(35192241-35192279)
chr2 (1-39)||(36202181-36202219)
chr2 (1-39)||(36202305-36202343)
chr2 (1-39)||(43209236-43209274)
chr2 (1-39)||(44354088-44354126)
chr2 (6-39)||(1591894-1591927)
chr2 (2-39)||(20025382-20025419)
chr2 (1-38)||(24492553-24492590)
chr2 (1-42)||(25301370-25301411)
chr2 (1-42)||(34963414-34963455)
chr2 (8-40)||(38232645-38232677)
[»] chr7 (52 HSPs)
chr7 (211-302)||(7737357-7737449)
chr7 (221-302)||(35130603-35130683)
chr7 (226-339)||(36647450-36647563)
chr7 (221-303)||(40772870-40772952)
chr7 (221-302)||(48821855-48821936)
chr7 (240-339)||(41830276-41830375)
chr7 (1-42)||(37391241-37391282)
chr7 (1-42)||(38416079-38416120)
chr7 (1-42)||(41745272-41745313)
chr7 (1-39)||(3216110-3216148)
chr7 (1-39)||(4098134-4098172)
chr7 (1-39)||(12180116-12180154)
chr7 (1-39)||(22947428-22947466)
chr7 (1-39)||(30441369-30441407)
chr7 (282-347)||(34510814-34510880)
chr7 (1-39)||(39459530-39459568)
chr7 (1-39)||(43742165-43742203)
chr7 (1-39)||(47668310-47668348)
chr7 (1-42)||(38651968-38652009)
chr7 (4-39)||(7881602-7881637)
chr7 (158-213)||(26389198-26389252)
chr7 (221-303)||(41832665-41832745)
chr7 (158-208)||(2577004-2577053)
chr7 (1-39)||(11469071-11469109)
chr7 (1-39)||(11666817-11666855)
chr7 (1-39)||(11666942-11666980)
chr7 (1-39)||(12179991-12180029)
chr7 (1-39)||(15984367-15984405)
chr7 (1-39)||(17358190-17358228)
chr7 (1-39)||(20033849-20033887)
chr7 (1-39)||(22947553-22947591)
chr7 (1-39)||(30631428-30631466)
chr7 (1-39)||(30631554-30631592)
chr7 (1-39)||(33582843-33582881)
chr7 (1-39)||(33582969-33583007)
chr7 (1-39)||(38415958-38415996)
chr7 (1-39)||(41877147-41877185)
chr7 (1-39)||(41877272-41877310)
chr7 (1-39)||(43742040-43742078)
chr7 (1-39)||(46483808-46483846)
chr7 (1-42)||(14542671-14542712)
chr7 (1-42)||(21872173-21872213)
chr7 (1-38)||(28311292-28311329)
chr7 (1-42)||(30441244-30441285)
chr7 (1-42)||(30538320-30538361)
chr7 (1-42)||(31079171-31079212)
chr7 (1-42)||(35077812-35077853)
chr7 (1-42)||(37101372-37101413)
chr7 (2-39)||(37101497-37101534)
chr7 (1-33)||(3687799-3687831)
chr7 (1-41)||(14542794-14542834)
chr7 (1-41)||(18318648-18318688)
[»] chr4 (42 HSPs)
chr4 (221-302)||(27510483-27510564)
chr4 (221-302)||(13436434-13436514)
chr4 (165-216)||(55849508-55849559)
chr4 (1-42)||(4758512-4758553)
chr4 (1-40)||(49633121-49633160)
chr4 (1-39)||(6378433-6378471)
chr4 (1-39)||(8401266-8401304)
chr4 (1-39)||(8401391-8401429)
chr4 (1-39)||(9150783-9150821)
chr4 (1-39)||(9663390-9663428)
chr4 (1-39)||(17697341-17697379)
chr4 (1-39)||(18638319-18638357)
chr4 (1-39)||(27487569-27487607)
chr4 (1-39)||(28755271-28755309)
chr4 (1-42)||(11347400-11347441)
chr4 (1-42)||(18909619-18909660)
chr4 (6-42)||(11347283-11347319)
chr4 (4-39)||(15323493-15323528)
chr4 (1-39)||(32581-32619)
chr4 (1-39)||(6458109-6458147)
chr4 (1-39)||(6810656-6810694)
chr4 (1-39)||(17697215-17697253)
chr4 (1-39)||(19203649-19203687)
chr4 (1-39)||(19203774-19203812)
chr4 (1-39)||(19495472-19495510)
chr4 (1-39)||(19495597-19495635)
chr4 (1-39)||(20570087-20570125)
chr4 (1-39)||(27487694-27487732)
chr4 (1-39)||(40269740-40269778)
chr4 (1-39)||(45617645-45617683)
chr4 (1-39)||(47465238-47465276)
chr4 (1-39)||(47465363-47465401)
chr4 (1-39)||(49236387-49236425)
chr4 (1-39)||(54442045-54442083)
chr4 (289-331)||(55851963-55852005)
chr4 (222-302)||(11001295-11001373)
chr4 (1-42)||(18638194-18638235)
chr4 (1-42)||(20569960-20570001)
chr4 (1-42)||(45617522-45617563)
chr4 (1-42)||(49249479-49249520)
chr4 (1-29)||(9663267-9663295)
chr4 (1-41)||(39537492-39537532)
[»] chr1 (46 HSPs)
chr1 (211-302)||(41418133-41418223)
chr1 (221-336)||(9908147-9908260)
chr1 (221-302)||(9905790-9905869)
chr1 (165-216)||(20225579-20225630)
chr1 (1-39)||(29525683-29525721)
chr1 (1-42)||(26712192-26712233)
chr1 (1-42)||(40633271-40633312)
chr1 (1-39)||(1340868-1340906)
chr1 (1-39)||(5246457-5246495)
chr1 (1-39)||(6954066-6954104)
chr1 (1-39)||(12163226-12163264)
chr1 (1-39)||(12886939-12886977)
chr1 (1-39)||(15541490-15541528)
chr1 (1-39)||(15734747-15734785)
chr1 (158-216)||(16385587-16385644)
chr1 (1-39)||(16985082-16985120)
chr1 (1-39)||(16985251-16985289)
chr1 (1-39)||(16985376-16985414)
chr1 (221-342)||(18705668-18705787)
chr1 (1-39)||(24169293-24169331)
chr1 (1-39)||(27270398-27270436)
chr1 (1-39)||(39934992-39935030)
chr1 (1-39)||(48044745-48044783)
chr1 (1-42)||(1613652-1613693)
chr1 (1-42)||(38601231-38601272)
chr1 (1-42)||(47675356-47675397)
chr1 (1-42)||(51166742-51166783)
chr1 (1-40)||(45323372-45323411)
chr1 (1-39)||(5246333-5246371)
chr1 (1-39)||(9403507-9403545)
chr1 (1-39)||(9631716-9631754)
chr1 (1-39)||(9631841-9631879)
chr1 (1-39)||(11586290-11586328)
chr1 (1-39)||(12163349-12163387)
chr1 (1-39)||(12886825-12886863)
chr1 (1-39)||(13430312-13430350)
chr1 (1-39)||(15734535-15734573)
chr1 (1-39)||(29641778-29641816)
chr1 (1-39)||(37216426-37216464)
chr1 (1-39)||(39935117-39935155)
chr1 (1-39)||(40633149-40633187)
chr1 (1-39)||(46173113-46173151)
chr1 (1-38)||(9403383-9403420)
chr1 (1-42)||(15541612-15541653)
chr1 (291-347)||(20226775-20226831)
chr1 (1-37)||(25395479-25395515)
[»] chr6 (37 HSPs)
chr6 (221-302)||(6860169-6860250)
chr6 (211-299)||(9231563-9231651)
chr6 (165-216)||(9664720-9664771)
chr6 (221-304)||(14618732-14618816)
chr6 (1-39)||(19591361-19591399)
chr6 (1-39)||(2255549-2255587)
chr6 (1-39)||(2965633-2965671)
chr6 (1-39)||(2965758-2965796)
chr6 (1-39)||(4407929-4407967)
chr6 (1-39)||(4408054-4408092)
chr6 (1-39)||(9887838-9887876)
chr6 (1-39)||(9964539-9964577)
chr6 (221-275)||(10774543-10774597)
chr6 (1-39)||(16127294-16127332)
chr6 (1-39)||(27660561-27660599)
chr6 (165-210)||(787298-787343)
chr6 (1-42)||(2039479-2039520)
chr6 (1-42)||(18699060-18699101)
chr6 (1-42)||(28038955-28038996)
chr6 (1-41)||(6176876-6176916)
chr6 (240-344)||(8655785-8655889)
chr6 (2-42)||(18699182-18699222)
chr6 (261-339)||(23343905-23343979)
chr6 (221-300)||(29427400-29427477)
chr6 (268-335)||(6825475-6825542)
chr6 (289-339)||(787424-787474)
chr6 (1-39)||(2039358-2039396)
chr6 (1-39)||(7850685-7850723)
chr6 (1-39)||(9865215-9865253)
chr6 (1-39)||(18771901-18771939)
chr6 (1-39)||(19591486-19591524)
chr6 (1-39)||(22043701-22043739)
chr6 (1-39)||(25948814-25948852)
chr6 (1-39)||(28039080-28039118)
chr6 (1-39)||(30240751-30240789)
chr6 (1-42)||(14349101-14349142)
chr6 (1-42)||(34204926-34204967)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-39)||(15552-15590)
scaffold0090 (1-39)||(15427-15465)
[»] scaffold0001 (2 HSPs)
scaffold0001 (289-335)||(146687-146733)
scaffold0001 (1-39)||(403654-403692)
[»] scaffold0049 (3 HSPs)
scaffold0049 (1-42)||(57451-57492)
scaffold0049 (1-39)||(62271-62309)
scaffold0049 (1-39)||(57575-57613)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-41)||(7520-7560)
scaffold0009 (1-42)||(7397-7438)
[»] scaffold0744 (1 HSPs)
scaffold0744 (1-39)||(1364-1402)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-39)||(2954-2992)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-39)||(9763-9801)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-42)||(125498-125539)
[»] scaffold0734 (1 HSPs)
scaffold0734 (1-39)||(3157-3195)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-39)||(6778-6816)
[»] scaffold0420 (2 HSPs)
scaffold0420 (1-39)||(4431-4469)
scaffold0420 (1-34)||(4305-4338)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-39)||(12675-12713)
scaffold0235 (1-39)||(24377-24415)
[»] scaffold0199 (2 HSPs)
scaffold0199 (1-39)||(11903-11941)
scaffold0199 (1-39)||(12027-12065)
[»] scaffold0098 (2 HSPs)
scaffold0098 (1-39)||(4146-4184)
scaffold0098 (1-38)||(4022-4059)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-39)||(72365-72403)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-39)||(92851-92889)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-39)||(142317-142355)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-42)||(24612-24653)
[»] scaffold0017 (1 HSPs)
scaffold0017 (221-274)||(183027-183080)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-42)||(249987-250028)
[»] scaffold0284 (1 HSPs)
scaffold0284 (1-33)||(3500-3532)
[»] scaffold0037 (1 HSPs)
scaffold0037 (3-39)||(96630-96666)


Alignment Details
Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 35610821 - 35610966
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgtacctctcttatcatt-gtaatattcactattatcatcaatagaaataatc 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||| | ||||||||||||||| || ||    
T  35610821 ttagggtactagtttagttactatataagtcacaaggttgactcatttgtacatctcttatcatttgtaattttcaattttatcatcaatagaagtattc 35610920  T
Q  257 tttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35610921 tttgagttttctctcattccttcattggatatcatgtttcctaaca 35610966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 302
Target Start/End: Complemental strand, 39091416 - 39091329
Alignment:
Q  215 ttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    ||||||||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||    
T  39091416 ttatcattgtaatattcacttctatcatcaatagaaatattatttgagttttctctcattccttcattggatatcatgtttcataaca 39091329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 27825773 - 27825691
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatg 304  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27825773 ttgtaatattcact-ttatcatcaatacaaagattatttgagttttctctcattccttcattggatatcatgtttcctaacatg 27825691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 33785847 - 33785928
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacat 303  Q
    ||||| |||||||| |||||||||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  33785847 ttgtactattcact-ttatcatcaatacaaagattgtttgagttttctctcattccttcattggatatcatgtttcctaacat 33785928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 19439528 - 19439601
Alignment:
Q  222 tgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgttt 295  Q
    ||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||| |||||||||||||||    
T  19439528 tgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattccttccttggatatcatgttt 19439601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 447216 - 447158
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    |||| |||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  447216 ttagggtactagtttagatactatagaagtcacaaagttgactcatttgtacctctctt 447158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 24595236 - 24595280
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtac 209  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  24595236 actagtttagttactatataagtcacatggttgactcatttgtac 24595280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18546435 - 18546473
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18546435 ttttcggtttgatttgcaccctcataaaatttttatttt 18546473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 20871350 - 20871396
Alignment:
Q  170 tttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20871350 tttagttactatataagtcacatggttgactcatttgtacctatctt 20871396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38560077 - 38560115
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38560077 ttttcggtttgatttgcaccctcataaaatttttatttt 38560115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5154921 - 5154880
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  5154921 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 5154880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 8504282 - 8504202
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||| ||||||||| ||||||||||||||||   | |||||||||||||||||||||||  ||||| ||||| |||||||||    
T  8504282 ttgtgatattcact-ttatcatcaatagaaagcttatttgagttttctctcattccttccatggatttcatgattcctaaca 8504202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 27462140 - 27462189
Alignment:
Q  167 tagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  27462140 tagtttagttactatataagtcatatggttgactcatttgtacctatctt 27462189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39825668 - 39825627
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  39825668 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 39825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55120840 - 55120799
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  55120840 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 55120799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7014952 - 7014912
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  7014952 ttttcggtttgatttgcaccctcgtaaaatttttatttttc 7014912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13207720 - 13207680
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  13207720 ttttcggtttgatttgcaccctcgtaaaatttttatttttc 13207680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 51308823 - 51308866
Alignment:
Q  166 ctagtttagttactatataagtcacaaggttgactcatttgtac 209  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  51308823 ctagtgtagttactatataagtcacatggttgactcatttgtac 51308866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 52737847 - 52737792
Alignment:
Q  284 gatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    ||||||||||||||||||||| ||||| |||||   ||||||||||||||||||||    
T  52737847 gatatcatgtttcctaacatggtatcagagcaaatctggtatccaccttgaaggat 52737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5047228 - 5047266
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5047228 ttttcggtttgatttgcaccctcgtaaaatttttatttt 5047266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7014790 - 7014828
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7014790 ttttcggtttgatttgcaccctcgtaaaatttttatttt 7014828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8764123 - 8764085
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8764123 ttttcggtttgatttgcaccctcgtaaaatttttatttt 8764085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12998759 - 12998797
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12998759 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12998797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 20868712 - 20868758
Alignment:
Q  170 tttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    |||||||||||||||||||||| |||||||| |||||||||| ||||    
T  20868712 tttagttactatataagtcacatggttgacttatttgtacctatctt 20868758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21802273 - 21802311
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  21802273 ttttcggtttgatttgcaccctcgtaaaatttttatttt 21802311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37585859 - 37585821
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  37585859 ttttcggtttgatttgcaccctcgtaaaatttttatttt 37585821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39825505 - 39825543
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39825505 ttttcggtttgatttgcaccctcgtaaaatttttatttt 39825543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39937077 - 39937115
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39937077 ttttcggtttgatttgcaccctcgtaaaatttttatttt 39937115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49817661 - 49817699
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  49817661 ttttcggtttgatttgcaccctcgtaaaatttttatttt 49817699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54014618 - 54014656
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  54014618 ttttcggtttgatttgcaccctcgtaaaatttttatttt 54014656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2985986 - 2986027
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  2985986 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 2986027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5047391 - 5047350
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  5047391 ttttcggtttgatttgcaccctcataaaaaatttatttttcg 5047350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7862622 - 7862581
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  7862622 ttttcggtttaatttgcaccctcgtaaaatttttatttttcg 7862581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15539939 - 15539980
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  15539939 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 15539980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16871398 - 16871357
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  16871398 ttttcagtttgatttgcaccctcgtaaaatttttatttttcg 16871357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24721344 - 24721303
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  24721344 ttttcggtttgatttgcaccttcgtaaaatttttatttttcg 24721303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37585697 - 37585738
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  37585697 ttttcggtttgatttgcaccatcataaaaattttatttttcg 37585738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13207551 - 13207591
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  13207551 ttttcggtttgatttgcatcctcgtaaaatttttatttttc 13207591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2148581 - 2148619
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  2148581 ttttcagtttgatttgcaccctcataaaaattttatttt 2148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3526763 - 3526725
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  3526763 ttttcggtttgatttgcaccctcgtaaattttttatttt 3526725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7731493 - 7731455
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  7731493 ttttcggtttgatttgcaacctcgtaaaatttttatttt 7731455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9268797 - 9268759
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  9268797 ttttcggtttgatttgcaccctcgtaaattttttatttt 9268759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11915065 - 11915027
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  11915065 ttttcggtttgatttgcaccctcgtaaaaattttatttt 11915027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12998922 - 12998884
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12998922 ttttcggtttgattttcaccctcgtaaaatttttatttt 12998884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16343697 - 16343735
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  16343697 ttttcggtttgatttgcaccctcgtaaaaattttatttt 16343735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 20868834 - 20868880
Alignment:
Q  289 catgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    ||||||||| |||||| ||||| |||| |||||||||||||||||||    
T  20868834 catgtttcccaacatggtatcagagcatgattggtatccaccttgaa 20868880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21015464 - 21015426
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  21015464 tttttggtttgatttgcaccctcgtaaaatttttatttt 21015426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23043097 - 23043059
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  23043097 ttttcggtttgatttacaccctcgtaaaatttttatttt 23043059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25024984 - 25025022
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  25024984 ttttcggtttgatttggaccctcgtaaaatttttatttt 25025022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25484177 - 25484215
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  25484177 ttttcggtttgatttgcaccctcgtaaaaattttatttt 25484215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26996083 - 26996121
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  26996083 ttttcggtttgatttgcacactcgtaaaatttttatttt 26996121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30751238 - 30751276
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  30751238 ttttcggtgtgatttgcaccctcgtaaaatttttatttt 30751276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30751401 - 30751363
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  30751401 ttttcggtttgatttgcaccttcgtaaaatttttatttt 30751363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 54014780 - 54014742
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  54014780 ttttcggtttgattttcaccctcgtaaaatttttatttt 54014742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15540101 - 15540060
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||| || |||||||    
T  15540101 ttttcggtttgatttgcaccctcgtaaaattattttttttcg 15540060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21802436 - 21802395
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  21802436 ttttcggtttgatttgcacccttgtaaaaattttatttttcg 21802395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 51306479 - 51306532
Alignment:
Q  282 tggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    ||||| |||||||||  |||||| ||||| |||| |||||||||||||||||||    
T  51306479 tggatgtcatgtttctcaacatggtatcagagcatgattggtatccaccttgaa 51306532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49817822 - 49817782
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  49817822 ttttcggtttgatttgcatcctcgtaaaaattttatttttc 49817782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 158 - 339
Target Start/End: Original strand, 4676154 - 4676335
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcattt-gtacctctcttatcattgtaatattcactattatcatcaatagaaataatc 256  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | |  |||||||||||||||||||||||| |||||||||||||||||| ||    
T  4676154 ttagagtactagtttagttactatataagtcacagggttgactcattttggatatctcttatcattgtaatattcacttttatcatcaatagaaatattc 4676253  T
Q  257 tttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    | | |||||||||||||||||||  ||||||||||||||||||| ||| ||||| ||| |   ||||||||||||||||||||    
T  4676254 tcttagttttctctcattccttc-gtggatatcatgtttcctaatatggtatcagagctaacctggtatccaccttgaaggat 4676335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 4678099 - 4678243
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcattt-gtacctctcttatcattgtaatattcactattatcatcaatagaaataatc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||| |||||||||||||||||| ||    
T  4678099 ttagagtactagtttagttactatataagtcacaaggttgactcattttggatatctcttatcattgtaatattcacttttatcatcaatagaaatattc 4678198  T
Q  257 tttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    | | |||||||||||||||||||  |||||||||||||||||||||    
T  4678199 tcttagttttctctcattccttc-gtggatatcatgtttcctaaca 4678243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 221 - 335
Target Start/End: Original strand, 26174323 - 26174437
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagatt 320  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||| | |||   |    
T  26174323 ttgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattccttccttggatatcatgtttactaacatggtatcagaacaaatat 26174422  T
Q  321 ggtatccaccttgaa 335  Q
    |||||||||||||||    
T  26174423 ggtatccaccttgaa 26174437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 11080221 - 11080312
Alignment:
Q  211 tctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||| ||||||||||| ||||||| |||||||||| |||  ||||||| |||||||| ||||||||||||||||||||||||||    
T  11080221 tctcttatcattttaatattcacttttatcattaatagaaatattctccgagttttttctcattctttcattggatatcatgtttcctaaca 11080312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 7277812 - 7277716
Alignment:
Q  239 tcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    ||||||||||||| | | | | ||||||||||| ||| |||  |||||| |||||||||||||||| ||||| |||| |||||||||||||||||||    
T  7277812 tcatcaatagaaagagtttcttagttttctctccttctttccatggataccatgtttcctaacatggtatcagagcatgattggtatccaccttgaa 7277716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 31909238 - 31909187
Alignment:
Q  163 gtactagtttagttactatataagtcacaaggttgactcatttgtacctctct 215  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31909238 gtactagtttagtcactatataagtcacaa-gttgactcatttgtacctctct 31909187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 12062802 - 12062842
Alignment:
Q  170 tttagttactatataagtcacaaggttgactcatttgtacc 210  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  12062802 tttagttactatataagtcacatggttgactcatttgtacc 12062842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 35416228 - 35416184
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtac 209  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||    
T  35416228 actagtttagtgactatataagtcacatggttgactcatttgtac 35416184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 296
Target Start/End: Original strand, 37892 - 37976
Alignment:
Q  211 tctcttatcatt-gtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttc 296  Q
    |||||||||||| |||| ||||||| ||||||| ||||||||   ||||  | ||||||||||||||||||||||||||||| ||||    
T  37892 tctcttatcatttgtaacattcacttttatcataaatagaaagtctctt--aattttctctcattccttcattggatatcatatttc 37976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2672200 - 2672162
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2672200 ttttcggtttgatttgcaccctcgtaaaatttttatttt 2672162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17159334 - 17159296
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  17159334 ttttcggtttgatttgcaccctcgtaaaatttttatttt 17159296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23352224 - 23352186
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  23352224 ttttcggtttgatttgcaccctcgtaaaatttttatttt 23352186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 26175468 - 26175522
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattc 275  Q
    |||||||||||||| |||||||||||| ||| | | |||||||||||||||||||    
T  26175468 ttgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattc 26175522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28004701 - 28004739
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28004701 ttttcggtttgatttgcaccctcgtaaaatttttatttt 28004739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28062003 - 28062041
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28062003 ttttcggtttgatttgcaccctcgtaaaatttttatttt 28062041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7595454 - 7595413
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  7595454 ttttcagtttgatttgcaccctcataaaaattttatttttcg 7595413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15113936 - 15113977
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  15113936 ttttcggtttgatttgcacccttgtaaaatttttatttttcg 15113977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18845103 - 18845144
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  18845103 ttttcggtttgattttcaccctcgtaaaatttttatttttcg 18845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 116842 - 116804
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  116842 tttttggtttgatttgcaccctcgtaaaatttttatttt 116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5385590 - 5385628
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  5385590 ttttcggtttgattttcaccctcgtaaaatttttatttt 5385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5385753 - 5385715
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  5385753 ttttcggtttgatttgcaccatcgtaaaatttttatttt 5385715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6162983 - 6163021
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  6162983 ttttcggtttgatttgcgctctcataaaatttttatttt 6163021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16669317 - 16669355
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  16669317 tttttggtttgatttgcaccctcgtaaaatttttatttt 16669355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17159172 - 17159210
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  17159172 ttttcggtttgatttgcaccctcgtaaaaattttatttt 17159210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18609331 - 18609369
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  18609331 ttttcggtttgatttgcaccctcgtaaattttttatttt 18609369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22981033 - 22980995
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  22981033 ttttcggtttgatttgtaccctcgtaaaatttttatttt 22980995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23943205 - 23943167
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  23943205 ttttcggtttgatttgcaccctcgtaaaaattttatttt 23943167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28004865 - 28004827
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  28004865 ttttcggtttgatttgcatcctcgtaaaatttttatttt 28004827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28062167 - 28062129
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  28062167 ttttcggtttgatttgcatcctcgtaaaatttttatttt 28062129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40774073 - 40774035
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  40774073 ttttcagtttgatttgcaccctcgtaaaatttttatttt 40774035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42933271 - 42933233
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  42933271 ttttcggtttgatttgcaccctcgtaaaattattatttt 42933233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43681276 - 43681314
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  43681276 ttttcggtttgatttgcaccctcgtaaaaattttatttt 43681314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 43681435 - 43681401
Alignment:
Q  5 cggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| |||||||||||||||    
T  43681435 cggtttgatttgcaccctcgtaaaatttttatttt 43681401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 116678 - 116719
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||| | || ||||||||||||||||||    
T  116678 ttttcggtttgatttgcatcatcgtaaaatttttatttttcg 116719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37597763 - 37597804
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  37597763 ttttcggtttgatttgcaccctcgtaaaaaatttatttttcg 37597804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 28898961 - 28898925
Alignment:
Q  3 ttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||| |||| |||||||||||||||    
T  28898961 ttcggtttgatttgcatcctcgtaaaatttttatttt 28898925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 6e-44; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 39040683 - 39040538
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcattt-gtacctctcttatcattgtaatattcactattatcatcaatagaaataatc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||| |||||||||||||||| | ||    
T  39040683 ttagagtactagtttagttactatataagtcacaaggttgactcattttgaatatctcttatcattgtaatattcacttttatcatcaatagaaacattc 39040584  T
Q  257 tttgagttttctctcattccttcattggatatcatgtttcctaacat 303  Q
    | | ||||||||||||||||||   ||||||||||||||||||||||    
T  39040583 tcttagttttctctcattcctt-tgtggatatcatgtttcctaacat 39040538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 211 - 339
Target Start/End: Complemental strand, 35309238 - 35309110
Alignment:
Q  211 tctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatca 310  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||| |||  ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  35309238 tctcttatcattgtaatatttacttttatcatcaatagaaatattctatgaaatttttctcattccttcattggatatcatgtttcctaacatggtatca 35309139  T
Q  311 aagcaagattggtatccaccttgaaggat 339  Q
     ||| |   ||||||||||||||||||||    
T  35309138 gagctaatctggtatccaccttgaaggat 35309110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 31186080 - 31185993
Alignment:
Q  211 tctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaa 300  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | |  |||||||||||||||||||| ||||||||||||||||||||    
T  31186080 tctcatatcattgtaatattcacttttatcatcaatagaaatattat--gagttttctctcattccttcgttggatatcatgtttcctaa 31185993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 27405386 - 27405306
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| ||| |||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  27405386 ttgtaatattcact-ttaccatcaatacaaacattatttgagttttctctcattccttcattggatatcatgtttcctaaca 27405306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 213 - 302
Target Start/End: Complemental strand, 35304765 - 35304676
Alignment:
Q  213 tcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||| |||| ||  ||||||| |||||||| ||||||||||||||||||    
T  35304765 tcttatcattataatattcacttttatcatcaatagaaatattctctgagattcttctcatttcttcattgaatatcatgtttcctaaca 35304676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 25213827 - 25213907
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| ||| | | ||| |||||||||||||||| |||||||||||||||||||||||||    
T  25213827 ttgtaatattcact-ttatcatcaatacaaaaattatttaagttttctctcattccctcattggatatcatgtttcctaaca 25213907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 25277977 - 25278057
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| ||| | | ||| |||||||||||||||| |||||||||||||||||||||||||    
T  25277977 ttgtaatattcact-ttatcatcaatacaaaaattatttaagttttctctcattccctcattggatatcatgtttcctaaca 25278057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 43233871 - 43233963
Alignment:
Q  211 tctcttatcatt-gtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||| ||||||||||   |||||||||||||||| | |||||||||||||||||||||||||  |||||  ||||||||||||||    
T  43233871 tctcttatcatttgtaatattcaactttatcatcaatagaaagattctttgagttttctctcattccttccatggatgccatgtttcctaaca 43233963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6802299 - 6802259
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6802299 ttttcggtttgatttgcaccctcataaaatttttatttttc 6802259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 21254247 - 21254319
Alignment:
Q  263 ttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    ||||||||| |||||||  |||||  |||||||||||||||| ||||| |||| |||||||||||||||||||    
T  21254247 ttttctctccttccttccatggatgccatgtttcctaacatggtatcatagcatgattggtatccaccttgaa 21254319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30126670 - 30126629
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  30126670 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 30126629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 18587515 - 18587463
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgtacc 210  Q
    |||| |||||||||  ||||||||||||||||||||||||| |||||||||||    
T  18587515 ttagggtactagttaggttactatataagtcacaaggttgattcatttgtacc 18587463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5081699 - 5081661
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5081699 ttttcggtttgatttgcaccctcgtaaaatttttatttt 5081661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6143376 - 6143414
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6143376 ttttcggtttgatttgcaccctcgtaaaatttttatttt 6143414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10690855 - 10690893
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  10690855 ttttcggtttgatttgcaccctcgtaaaatttttatttt 10690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12369688 - 12369650
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12369688 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12369650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13892626 - 13892664
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  13892626 ttttcggtttgatttgcaccctcataaaaattttatttt 13892664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13892789 - 13892751
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  13892789 ttttcggtttgatttgcaccctcgtaaaatttttatttt 13892751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18805387 - 18805349
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18805387 ttttcggtttgatttgcaccctcgtaaaatttttatttt 18805349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20352857 - 20352819
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20352857 ttttcggtttgatttgcaccctcgtaaaatttttatttt 20352819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21262828 - 21262790
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  21262828 ttttcggtttgatttgcaccctcgtaaaatttttatttt 21262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23294730 - 23294692
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  23294730 ttttcggtttgatttgcaccctcgtaaaatttttatttt 23294692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27830016 - 27830054
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27830016 ttttcggtttgatttgcaccctcgtaaaatttttatttt 27830054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39886574 - 39886612
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39886574 ttttcggtttgatttgcaccctcgtaaaatttttatttt 39886612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40616421 - 40616383
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  40616421 ttttcggtttgatttgcaccctcgtaaaatttttatttt 40616383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16867984 - 16867943
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  16867984 ttttcggtttgatttgcaccatcgtaaaatttttatttttcg 16867943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22634178 - 22634219
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  22634178 ttttcggtttgattttcaccctcgtaaaatttttatttttcg 22634219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38678401 - 38678360
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  38678401 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 38678360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19635074 - 19635034
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||| |||||||||||||| |||||||||||    
T  19635074 ttttcggtttgattagcaccctcataaaaattttatttttc 19635034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22833457 - 22833489
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  22833457 ttttcggtttgatttgcaccctcataaaatttt 22833489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25591203 - 25591163
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  25591203 ttttcggtttgatttgcaccctcgtaaaaattttatttttc 25591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14946628 - 14946593
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttat 36  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14946628 ttttcggtttgatttgcaccctcgtaaaatttttat 14946593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8405979 - 8406017
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  8405979 ttttcggtttgatttgcaccatcgtaaaatttttatttt 8406017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8406142 - 8406104
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  8406142 ttttcggtttgattttcaccctcgtaaaatttttatttt 8406104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11762309 - 11762347
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  11762309 ttttcggtttgatttgcaccctcgtaaaattttcatttt 11762347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12369525 - 12369563
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  12369525 ttttcggtttgatttgcaccctcgtaaaattttgatttt 12369563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18618319 - 18618357
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  18618319 tttttggtttgatttgcaccctcgtaaaatttttatttt 18618357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20352694 - 20352732
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  20352694 ttttcggtttgatttacaccctcgtaaaatttttatttt 20352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20884258 - 20884220
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  20884258 ttttcggtttgatttgcaccctcgtaaaatgtttatttt 20884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21000415 - 21000453
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  21000415 ttttcggtttgattttcaccctcgtaaaatttttatttt 21000453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21000578 - 21000540
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  21000578 ttttcggtttgatttgcaccctcgtaaaaattttatttt 21000540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26006738 - 26006700
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  26006738 ttttcggtttgatttgcaccctcgtaaattttttatttt 26006700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26404942 - 26404980
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  26404942 ttttcggtttgatttgcaccctcgtaacatttttatttt 26404980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27451357 - 27451395
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  27451357 ttttcggtttgattttcaccctcgtaaaatttttatttt 27451395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37064406 - 37064444
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  37064406 ttttcggtttgatttgcaccctcgtaaaaattttatttt 37064444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39886737 - 39886699
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  39886737 ttttcggtttgatttgcaccctcgtaaaaattttatttt 39886699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5105161 - 5105202
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  5105161 ttttcagtttgatttgcacccttgtaaaatttttatttttcg 5105202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21262665 - 21262706
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  21262665 ttttcggtttgatttgcaccctcttaaaaaatttatttttcg 21262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26006574 - 26006615
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  26006574 ttttcggtttgatttgcaccctcgtaaaaaatttatttttcg 26006615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 27316223 - 27316190
Alignment:
Q  8 tttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||| |||||||||||||||||    
T  27316223 tttgatttgcaccctcgtaaaatttttatttttc 27316190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29989525 - 29989566
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||| |||||||||||||||||| ||||| ||||||||||||    
T  29989525 tttttggtttgatttgcaccctcgtaaaaattttatttttcg 29989566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 27172965 - 27172922
Alignment:
Q  164 tactagtttagttactatataagtcacaaggttgactcatttgta 208  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||    
T  27172965 tactagtttagttactatataagtcattagg-tgactcatttgta 27172922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 212 - 302
Target Start/End: Original strand, 22958 - 23048
Alignment:
Q  212 ctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  22958 ctcttatcattgtaatattcacttttatcatcaatagaaatattatttgagttttctctcattccttcattggatatcatgtttcctaaca 23048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 36316375 - 36316276
Alignment:
Q  211 tctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatca 310  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  36316375 tctcatatcattgtaatattcacttttatcatcaatagaaatattgtctgagttttctctcattccttcattggatatcatgtttcctaatatggtatca 36316276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 6016936 - 6016847
Alignment:
Q  211 tctcttatcattgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||||| ||||||| |||||||||||||||||| |||  ||||||| || ||||||||||||||||||||||||||||||||    
T  6016936 tctcttatcattgtaacattcacttttatcatcaatagaaatattct--gagttttttcccattccttcattggatatcatgtttcctaaca 6016847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 12015132 - 12015206
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgttt 295  Q
    |||||||||||||| |||||||||||| ||||| | ||||||||||||||||||| ||| |||||||||||||||    
T  12015132 ttgtaatattcacttttatcatcaatacaaatattatttgagttttctctcattctttccttggatatcatgttt 12015206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 339
Target Start/End: Original strand, 24038338 - 24038438
Alignment:
Q  239 tcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaagga 338  Q
    ||||||||||||| | | | | |||||||||||||||||||  |||||  ||||||| |||||||| ||||| |||  | ||||||||||||||||||||    
T  24038338 tcatcaatagaaaaagtttcttagttttctctcattccttccatggatgccatgttttctaacatggtatcagagcctggttggtatccaccttgaagga 24038437  T
Q  339 t 339  Q
    |    
T  24038438 t 24038438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 26608147 - 26608095
Alignment:
Q  164 tactagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  26608147 tactagttcagttactatataagtcacaaggttgactcatctgtacctatctt 26608095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22422985 - 22422947
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22422985 ttttcggtttgatttgcaccctcataaaatttttatttt 22422947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42336032 - 42335994
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42336032 ttttcggtttgatttgcaccctcataaaatttttatttt 42335994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33216612 - 33216571
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  33216612 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 33216571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39615807 - 39615766
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  39615807 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 39615766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 397040 - 397002
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  397040 ttttcggtttgatttgcaccctcgtaaaatttttatttt 397002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5863247 - 5863285
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5863247 ttttcggtttgatttgcaccctcgtaaaatttttatttt 5863285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5863411 - 5863373
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5863411 ttttcggtttgatttgcaccctcgtaaaatttttatttt 5863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7511571 - 7511533
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7511571 ttttcggtttgatttgcaccctcgtaaaatttttatttt 7511533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7515855 - 7515817
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7515855 ttttcggtttgatttgcaccctcgtaaaatttttatttt 7515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12883306 - 12883268
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12883306 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12883268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18817412 - 18817374
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18817412 ttttcggtttgatttgcaccctcgtaaaatttttatttt 18817374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20891819 - 20891781
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20891819 ttttcggtttgatttgcaccctcgtaaaatttttatttt 20891781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20962105 - 20962143
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20962105 ttttcggtttgatttgcaccctcgtaaaatttttatttt 20962143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22265360 - 22265322
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22265360 ttttcggtttgatttgcaccctcgtaaaatttttatttt 22265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40926903 - 40926865
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  40926903 ttttcggtttgatttgcaccctcgtaaaatttttatttt 40926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43209401 - 43209363
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  43209401 ttttcggtttgatttgcaccctcgtaaaatttttatttt 43209363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44353963 - 44354001
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  44353963 tttttggtttgatttgcaccctcataaaatttttatttt 44354001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1320664 - 1320705
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  1320664 ttttcggtttgatttgcaccatcgtaaaatttttatttttcg 1320705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 5529149 - 5529108
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  5529149 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 5529108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8972890 - 8972849
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  8972890 ttttcggtttaatttgcaccctcgtaaaatttttatttttcg 8972849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 18966904 - 18966863
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||| |||||||||||||||| ||||||||||||||||||    
T  18966904 ttttcgatttgatttgcaccctcgtaaaatttttatttttcg 18966863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20100820 - 20100860
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  20100820 ttttcggtttgatttacaccctcgtaaaatttttatttttc 20100860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 20513892 - 20513853
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattttt 40  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  20513892 ttttcggtttgatttgcaccatcgtaaaatttttattttt 20513853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1151378 - 1151340
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  1151378 ttttcggtttgatttgcaccctcgtaaaaattttatttt 1151340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5513544 - 5513582
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  5513544 ttttcggtttgatttgcaccctcgtaaaaattttatttt 5513582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5513707 - 5513669
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  5513707 ttttcggtttgatttgcatcctcgtaaaatttttatttt 5513669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7511408 - 7511446
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  7511408 ttttcggtttgatttgcaccctcgtaaaacttttatttt 7511446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7515692 - 7515730
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  7515692 ttttcggtttgatttgcaccctcgtaaaacttttatttt 7515730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12883143 - 12883181
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  12883143 ttttcggtttgatttgcaccctcgtaaaaattttatttt 12883181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14274286 - 14274324
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  14274286 ttttcggtttgatttccaccctcgtaaaatttttatttt 14274324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18756827 - 18756865
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  18756827 ttttcggtttgatttgcaccctcgtaaaaattttatttt 18756865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18966741 - 18966779
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  18966741 tttttggtttgatttgcaccctcgtaaaatttttatttt 18966779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20100983 - 20100945
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  20100983 tttttggtttgatttgcaccctcgtaaaatttttatttt 20100945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20513730 - 20513768
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  20513730 ttttcggtttgatttgcactctcgtaaaatttttatttt 20513768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22265196 - 22265234
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  22265196 ttttcggtttgatttgcaccatcgtaaaatttttatttt 22265234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25890771 - 25890733
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  25890771 ttttcggtttgatttgcaccctcgtaaaaattttatttt 25890733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26502425 - 26502463
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  26502425 ttttcggtttgatttgcaccctcgtaaaaattttatttt 26502463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27927157 - 27927119
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  27927157 tttttggtttgatttgcaccctcgtaaaatttttatttt 27927119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28192358 - 28192396
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  28192358 ttttcggtttgatttgcacccttgtaaaatttttatttt 28192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28192521 - 28192483
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  28192521 ttttcggtttgattttcaccctcgtaaaatttttatttt 28192483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30462406 - 30462368
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  30462406 ttttcggtttgatttgcaccctcgtaaaacttttatttt 30462368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34963577 - 34963539
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  34963577 ttttcggtttgatttgcactctcgtaaaatttttatttt 34963539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 35192241 - 35192279
Alignment:
Q  2 tttcggtttgatttgcaccctcataaaatttttattttt 40  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  35192241 tttcggtttgatttgcacccttgtaaaatttttattttt 35192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36202181 - 36202219
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  36202181 ttttcggtttgatttgcaccctcgtaaaaattttatttt 36202219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36202343 - 36202305
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  36202343 ttttcgatttgatttgcaccctcgtaaaatttttatttt 36202305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43209236 - 43209274
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  43209236 ttttcagtttgatttgcaccctcgtaaaatttttatttt 43209274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44354126 - 44354088
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  44354126 ttttcggtttgatttgcacccttgtaaaatttttatttt 44354088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 1591894 - 1591927
Alignment:
Q  6 ggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||| |||||||||||||||    
T  1591894 ggtttgatttgcaccctcgtaaaatttttatttt 1591927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 20025382 - 20025419
Alignment:
Q  2 tttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||| || ||||||||||||    
T  20025382 tttcggtttgatttgcaccctcgtacaatttttatttt 20025419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24492553 - 24492590
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattt 38  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  24492553 ttttcggtttgatttgcaccctcgtaaattttttattt 24492590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 25301370 - 25301411
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  25301370 ttttcggtttgattttcacgctcgtaaaatttttatttttcg 25301411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 34963414 - 34963455
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  34963414 ttttcgctttgatttgcaccctcgtaaaaattttatttttcg 34963455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 38232645 - 38232677
Alignment:
Q  8 tttgatttgcaccctcataaaatttttattttt 40  Q
    |||||||||||||||| ||||||||||||||||    
T  38232645 tttgatttgcaccctcgtaaaatttttattttt 38232677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 7737357 - 7737449
Alignment:
Q  211 tctcttatcatt-gtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||| |||||||||||| |||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  7737357 tctcttatcatttgtaatattcacttttatcatcaatagaaagattctcttagttttctctcattccttcattggatatcatgtttcctaaca 7737449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 35130603 - 35130683
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  35130603 ttgtaatattcact-ttatcatcaatacaaacattatttgagttttctctcattccttcattggatatcatgtttcctaaca 35130683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 339
Target Start/End: Complemental strand, 36647563 - 36647450
Alignment:
Q  226 atattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtat 325  Q
    ||||||| | |||||||||||||||||| ||| | ||||||||||||||| ||||||||||||||||||| |||| ||| ||||| ||| |   ||||||    
T  36647563 atattcatttttatcatcaatagaaatattctctaagttttctctcattctttcattggatatcatgttttctaatatggtatcagagctaatctggtat 36647464  T
Q  326 ccaccttgaaggat 339  Q
     || ||||||||||    
T  36647463 tcatcttgaaggat 36647450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 221 - 303
Target Start/End: Complemental strand, 40772952 - 40772870
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacat 303  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||| ||| |||| |||||| |||||||    
T  40772952 ttgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattccttccttgtatatgatgtttactaacat 40772870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 48821936 - 48821855
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||  |||||||||||||||| | ||| |||||||||||||||| ||||  ||||||||||||||| |||||    
T  48821936 ttgtaatattcacatttatcatcaatagaaaaattctctgagttttctctcatttcttccatggatatcatgtttcataaca 48821855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 339
Target Start/End: Original strand, 41830276 - 41830375
Alignment:
Q  240 catcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    |||||||||||| | | | | |||||||||||||||||||  |||||  |||||||||||||||| ||| | ||| |  |||||||||||||||||||||    
T  41830276 catcaatagaaagagtttcttagttttctctcattccttccatggatgacatgtttcctaacatggtattagagctaacttggtatccaccttgaaggat 41830375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37391241 - 37391282
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  37391241 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 37391282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38416120 - 38416079
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  38416120 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 38416079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41745313 - 41745272
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  41745313 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 41745272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3216110 - 3216148
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  3216110 ttttcggtttgatttgcaccctcgtaaaatttttatttt 3216148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4098134 - 4098172
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4098134 ttttcggtttgatttgcaccctcgtaaaatttttatttt 4098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12180154 - 12180116
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12180154 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12180116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22947428 - 22947466
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22947428 ttttcggtttgatttgcaccctcgtaaaatttttatttt 22947466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30441407 - 30441369
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  30441407 ttttcggtttgatttgcaccctcgtaaaatttttatttt 30441369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 34510814 - 34510880
Alignment:
Q  282 tggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaagg-attttccgct 347  Q
    ||||||||||||||||||||||| ||||| ||| |   |||||||||||||||||| ||||||||||    
T  34510814 tggatatcatgtttcctaacatggtatcagagctaatctggtatccaccttgaaggaattttccgct 34510880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39459568 - 39459530
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39459568 ttttcggtttgatttgcaccctcgtaaaatttttatttt 39459530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43742203 - 43742165
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  43742203 ttttcggtttgatttgcaccctcgtaaaatttttatttt 43742165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47668348 - 47668310
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  47668348 ttttcggtttgatttgcaccctcgtaaaatttttatttt 47668310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38652009 - 38651968
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  38652009 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 38651968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 7881637 - 7881602
Alignment:
Q  4 tcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  7881637 tcggtttgatttgcaccctcgtaaaatttttatttt 7881602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 26389198 - 26389252
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgtacctct 213  Q
    |||| ||||||||||||| |||||||||||||||| |||||||| |||||| ||||    
T  26389198 ttagtgtactagtttagtcactatataagtcacaa-gttgactcttttgtatctct 26389252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 41832665 - 41832745
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacat 303  Q
    ||||||||||||  ||| ||||||||||||| | | | | |||||||||||||||||||  |||||  |||||||||||||||    
T  41832665 ttgtaatattca--attttcatcaatagaaagagtttcttagttttctctcattccttccatggatgccatgtttcctaacat 41832745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 2577004 - 2577053
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgta 208  Q
    |||| |||||||| |||| |||||||||||||||| |||||||||||||||    
T  2577004 ttagggtactagtatagtcactatataagtcacaa-gttgactcatttgta 2577053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11469109 - 11469071
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  11469109 ttttcggtttgatttgcaccctcgtaaaatttatatttt 11469071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11666817 - 11666855
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  11666817 tttttggtttgatttgcaccctcgtaaaatttttatttt 11666855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11666980 - 11666942
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  11666980 ttttcagtttaatttgcaccctcataaaatttttatttt 11666942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12179991 - 12180029
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  12179991 ttttcggtttgattttcaccctcgtaaaatttttatttt 12180029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15984405 - 15984367
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  15984405 ttttcggtttgatttccaccctcgtaaaatttttatttt 15984367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17358228 - 17358190
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  17358228 ttttcggtttgattttcaccctcgtaaaatttttatttt 17358190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20033887 - 20033849
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  20033887 ttttcggtttgatttgcaccctcgtaaaaattttatttt 20033849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22947591 - 22947553
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  22947591 ttttcagtttgatttgcaccctcgtaaaatttttatttt 22947553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30631428 - 30631466
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  30631428 ttttcggtttgatttgcaccctcgtaaaaattttatttt 30631466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30631592 - 30631554
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  30631592 ttttcggtttgatttgcaccctcgtaaattttttatttt 30631554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33582843 - 33582881
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  33582843 ttttcggtttgatttgcaccctcgtaaaaattttatttt 33582881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 33583007 - 33582969
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  33583007 ttttcggtttgatttgcaccctcgtaaaaattttatttt 33582969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38415958 - 38415996
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  38415958 ttttcggtttgatttacaccctcgtaaaatttttatttt 38415996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41877147 - 41877185
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  41877147 ttttcggtttgatttgcaccctcgtaaaaattttatttt 41877185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41877310 - 41877272
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  41877310 ttttcggtttgatttgcaccctcgtaaattttttatttt 41877272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43742040 - 43742078
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  43742040 ttttcggtttgatttgcaccctcgtaaaaattttatttt 43742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46483846 - 46483808
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  46483846 ttttcggtttgatttacaccctcgtaaaatttttatttt 46483808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 14542671 - 14542712
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| |||||  |||||||||||    
T  14542671 ttttcggtttgatttgcaccctcgtaaaaaatttatttttcg 14542712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21872173 - 21872213
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  21872173 ttttcggtttgatttgcaccctcgtaaaa-ttttatttttcg 21872213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28311329 - 28311292
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattt 38  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  28311329 ttttcggtttgatttgcaccctcgtaaaaattttattt 28311292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30441244 - 30441285
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  30441244 ttttcggtttgattttcaccctcgtaaaaattttatttttcg 30441285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 30538361 - 30538320
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| |||||||||||||| || ||||||||||||||||||    
T  30538361 ttttcagtttgatttgcaccatcgtaaaatttttatttttcg 30538320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31079171 - 31079212
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||  ||||||| ||||||||||    
T  31079171 ttttcggtttgatttgcaccctggtaaaattgttatttttcg 31079212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35077853 - 35077812
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||  |||||| ||||||||||||||||||    
T  35077853 ttttcggtttgatttttaccctcgtaaaatttttatttttcg 35077812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37101372 - 37101413
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  37101372 ttttcagtttgatttgcaccctcgtaaaaattttatttttcg 37101413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 37101534 - 37101497
Alignment:
Q  2 tttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| || |||||||||||||||    
T  37101534 tttcggtttgatttgcaccatcgtaaaatttttatttt 37101497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3687831 - 3687799
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  3687831 ttttcggtttgatttgcaccctcgtaaaatttt 3687799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14542834 - 14542794
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||| ||||||  ||||||||||||||||    
T  14542834 ttttcggtttgatttgaaccctcgcaaaatttttatttttc 14542794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18318688 - 18318648
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| ||||||| || ||||||    
T  18318688 ttttcggtttgatttgcaccctcgtaaaattattttttttc 18318648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 27510564 - 27510483
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  27510564 ttgtaatattcacttttatcatcaatagaaagattctcttagttttctctcattccttcattggatatcatgtttcctaaca 27510483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 13436514 - 13436434
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||  ||  ||||||||||||||||||    
T  13436514 ttgtaatattcacttttatcatcaataaaaataatc-ttgagttttctctcattcctttcttaaatatcatgtttcctaaca 13436434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 55849559 - 55849508
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||    
T  55849559 actagttcagttactatataagtcacatggttgactcatttgtacctatctt 55849508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4758512 - 4758553
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  4758512 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 4758553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 49633160 - 49633121
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattttt 40  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  49633160 ttttcggtttgatttgcaccctcgtaaaatttttattttt 49633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6378433 - 6378471
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6378433 ttttcggtttgatttgcaccctcgtaaaatttttatttt 6378471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8401266 - 8401304
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8401266 ttttcggtttgatttgcaccctcgtaaaatttttatttt 8401304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8401429 - 8401391
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  8401429 ttttcggtttgatttgcaccctcgtaaaatttttatttt 8401391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9150783 - 9150821
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9150783 ttttcggtttgatttgcaccctcgtaaaatttttatttt 9150821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9663428 - 9663390
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9663428 ttttcggtttgatttgcaccctcgtaaaatttttatttt 9663390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17697379 - 17697341
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  17697379 ttttcggtttgatttgcaccctcgtaaaatttttatttt 17697341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18638357 - 18638319
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  18638357 ttttcggtttgatttgcaccctcgtaaaatttttatttt 18638319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27487569 - 27487607
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  27487569 ttttcggtttgattttcaccctcataaaatttttatttt 27487607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28755309 - 28755271
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  28755309 ttttcggtttgatttgcaccctcgtaaaatttttatttt 28755271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11347441 - 11347400
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  11347441 ttttcggtttgatttgcacccacataaaaattttatttttcg 11347400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18909619 - 18909660
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  18909619 ttttcggtttgatttgcaccatcgtaaaatttttatttttcg 18909660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 11347283 - 11347319
Alignment:
Q  6 ggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11347283 ggtttgatttgcaccctcgtaaaatttttatttttcg 11347319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 15323493 - 15323528
Alignment:
Q  4 tcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  15323493 tcggtttgatttgcaccctcgtaaaatttttatttt 15323528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32619 - 32581
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  32619 ttttcggtttgatttgcaccctcataaaaaatttatttt 32581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6458147 - 6458109
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  6458147 ttttcggtttgattttcaccctcgtaaaatttttatttt 6458109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6810694 - 6810656
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  6810694 ttttcggtttgatttgcaccctcgtaaaaattttatttt 6810656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 17697215 - 17697253
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  17697215 ttttcggtttgatttgcaccctcgtaaaaattttatttt 17697253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19203649 - 19203687
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  19203649 ttttcggtttgattttcaccctcgtaaaatttttatttt 19203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19203812 - 19203774
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  19203812 ttttcggtttgatttgcaccctcgtaaaaattttatttt 19203774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19495472 - 19495510
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  19495472 ttttcggtttgatttgcacccttgtaaaatttttatttt 19495510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19495635 - 19495597
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  19495635 ttttcggtttgattttcaccctcgtaaaatttttatttt 19495597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20570125 - 20570087
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  20570125 ttttcggtttgatttgcacccttgtaaaatttttatttt 20570087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27487732 - 27487694
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| || |||||||||||||||    
T  27487732 ttttcggtttgatttgcaccatcgtaaaatttttatttt 27487694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40269778 - 40269740
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  40269778 ttttcggtttgatttgcgccctcttaaaatttttatttt 40269740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45617683 - 45617645
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  45617683 ttttcggtttgatttgcaccctcgtaaaaattttatttt 45617645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47465238 - 47465276
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  47465238 ttttcggtttgatttgcaccctcgtaaaaattttatttt 47465276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47465401 - 47465363
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  47465401 ttttcggtttgatttgcaccctcgtaaaaattttatttt 47465363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49236387 - 49236425
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  49236387 ttttcggtttgatttgcaccctcgtaaaaattttatttt 49236425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54442045 - 54442083
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  54442045 ttttcagtttgatttgcaccctcgtaaaatttttatttt 54442083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 331
Target Start/End: Complemental strand, 55852005 - 55851963
Alignment:
Q  289 catgtttcctaacatgctatcaaagcaagattggtatccacct 331  Q
    |||||||||||||||  ||||| ||||||||||||||||||||    
T  55852005 catgtttcctaacatcgtatcagagcaagattggtatccacct 55851963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 11001373 - 11001295
Alignment:
Q  222 tgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    ||||| ||||||| |||||||||||| |||  ||  ||||||||||| ||| | ||||  |||||||||||||||||||||    
T  11001373 tgtaacattcacttttatcatcaataaaaa--attcttgagttttctttcagttcttccatggatatcatgtttcctaaca 11001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18638194 - 18638235
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||    
T  18638194 ttttcagtttgattttcaccctcgtaaaatttttatttttcg 18638235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20569960 - 20570001
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||    
T  20569960 ttttcagtttgattttcaccctcgtaaaatttttatttttcg 20570001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45617522 - 45617563
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  45617522 ttttcgatttgatttgtaccctcgtaaaatttttatttttcg 45617563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49249479 - 49249520
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| |||| || ||||||||||||||||||    
T  49249479 ttttcggtttgatttacaccatcgtaaaatttttatttttcg 49249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9663267 - 9663295
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaa 29  Q
    |||||||||||||||||||||||||||||    
T  9663267 ttttcggtttgatttgcaccctcataaaa 9663295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39537532 - 39537492
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    |||||||||||||||||||| || ||||| |||||||||||    
T  39537532 ttttcggtttgatttgcaccatcgtaaaaattttatttttc 39537492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 211 - 302
Target Start/End: Original strand, 41418133 - 41418223
Alignment:
Q  211 tctcttatcatt-gtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  41418133 tctcttatcatttgtaatattcacttttatcatcaattgaaagaatctt--agttttctctaattccttcattggatatcatgtttcctaaca 41418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 9908260 - 9908147
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagatt 320  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||| |   |    
T  9908260 ttgtaatattcact-ttatcatcaatacaaagattatttgagttttctctcattccttg-ttggatatcatgtttcctaacatggtatcagagctaatct 9908163  T
Q  321 ggtatccaccttgaag 336  Q
    ||||||||||||||||    
T  9908162 ggtatccaccttgaag 9908147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 9905869 - 9905790
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||  ||||||||||||||||||||||    
T  9905869 ttgtaatattcact-ttatcatcaatacaaagattatttgagttttctctcattcctt-gttggatatcatgtttcctaaca 9905790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 20225630 - 20225579
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  20225630 actagtttagttactatataagtcacatggttgactcttttgtacctatctt 20225579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29525683 - 29525721
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29525683 ttttcggtttgatttgcaccctcataaaatttttatttt 29525721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26712233 - 26712192
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  26712233 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 26712192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40633312 - 40633271
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  40633312 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 40633271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1340906 - 1340868
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1340906 ttttcggtttgatttgcaccctcgtaaaatttttatttt 1340868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5246495 - 5246457
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  5246495 ttttcggtttgatttgcaccctcgtaaaatttttatttt 5246457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6954104 - 6954066
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6954104 ttttcggtttgatttgcaccctcgtaaaatttttatttt 6954066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12163226 - 12163264
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12163226 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12163264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12886977 - 12886939
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  12886977 ttttcggtttgatttgcaccctcgtaaaatttttatttt 12886939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15541490 - 15541528
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15541490 ttttcggtttgatttgcaccctcgtaaaatttttatttt 15541528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15734785 - 15734747
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15734785 ttttcggtttgatttgcaccctcgtaaaatttttatttt 15734747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 16385587 - 16385644
Alignment:
Q  158 ttagagtactagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    |||| ||||||||||||| ||| |||||||||||| |||||||||||||||| ||||||    
T  16385587 ttagggtactagtttagtcactgtataagtcacaa-gttgactcatttgtacatctctt 16385644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16985082 - 16985120
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16985082 ttttcggtttgatttgcaccctcgtaaaatttttatttt 16985120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16985251 - 16985289
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16985251 ttttcggtttgatttgcaccctcgtaaaatttttatttt 16985289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16985414 - 16985376
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16985414 ttttcggtttgatttgcaccctcgtaaaatttttatttt 16985376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 342
Target Start/End: Complemental strand, 18705787 - 18705668
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagatt 320  Q
    |||||||||||  |||| ||||||||||||| | | | | ||||||||||| ||||||   |||||  ||||||| |||||||| ||||| ||| |   |    
T  18705787 ttgtaatattc--tattttcatcaatagaaagagtttcttagttttctctccttcctttcatggatgccatgttttctaacatggtatcagagctaatct 18705690  T
Q  321 ggtatccaccttgaaggatttt 342  Q
    ||||||||||||||||||||||    
T  18705689 ggtatccaccttgaaggatttt 18705668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24169331 - 24169293
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24169331 ttttcggtttgatttgcaccctcgtaaaatttttatttt 24169293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27270398 - 27270436
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  27270398 ttttcggtttgatttgcaccctcgtaaaatttttatttt 27270436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39934992 - 39935030
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39934992 ttttcggtttgatttgcaccctcgtaaaatttttatttt 39935030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48044745 - 48044783
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  48044745 ttttcggtttgatttgcaccctcataaaaattttatttt 48044783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1613652 - 1613693
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  1613652 ttttcggtttgatttgcacactcgtaaaatttttatttttcg 1613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38601231 - 38601272
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  38601231 ttttcggtttgatttgcagcctcgtaaaatttttatttttcg 38601272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47675397 - 47675356
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  47675397 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 47675356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51166742 - 51166783
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  51166742 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 51166783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 45323411 - 45323372
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattttt 40  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  45323411 ttttcggtttgatttgcaccctcgtaaattttttattttt 45323372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5246333 - 5246371
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  5246333 ttttcggtttgatttgcaccctcgtaaaaattttatttt 5246371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9403545 - 9403507
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  9403545 ttttcggtttgatttgtaccctcgtaaaatttttatttt 9403507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9631716 - 9631754
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  9631716 ttttcggtttgatttgcactctcgtaaaatttttatttt 9631754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9631879 - 9631841
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  9631879 ttttcggtttgatttgcaccctcgtaaaaattttatttt 9631841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11586290 - 11586328
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  11586290 ttttcggtttgatttgcacccttgtaaaatttttatttt 11586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12163387 - 12163349
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  12163387 ttttcggtttgaattgcaccctcgtaaaatttttatttt 12163349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12886825 - 12886863
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  12886825 ttttcggtttgatttgcaccctcgtaaaaattttatttt 12886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13430312 - 13430350
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  13430312 ttttcagtttgatttgcaccctcgtaaaatttttatttt 13430350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15734535 - 15734573
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  15734535 ttttcggtttgatttgcaccctcgtaaaaattttatttt 15734573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29641816 - 29641778
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  29641816 ttttcggtttgatttgcaccttcataaaaattttatttt 29641778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37216464 - 37216426
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  37216464 ttttcggtttgatttgcaccctcgtaaaaattttatttt 37216426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39935155 - 39935117
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  39935155 ttttcggtttgatttgcaccctcgtaaaaattttatttt 39935117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40633149 - 40633187
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  40633149 ttttcggtgtgatttgcaccctcgtaaaatttttatttt 40633187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 46173113 - 46173151
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  46173113 ttttcggtttgatttgcaccctcgtaaaaattttatttt 46173151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 9403383 - 9403420
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattt 38  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  9403383 ttttcggtttgatttgcaccctcgtaaaaattttattt 9403420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15541653 - 15541612
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||    
T  15541653 ttttcagtttgatttgcaccctcgtaaaacttttatttttcg 15541612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 20226831 - 20226775
Alignment:
Q  291 tgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggattttccgct 347  Q
    |||||||||||||| ||||| ||| |   |||||||| |||||||||||||||||||    
T  20226831 tgtttcctaacatggtatcagagctaatctggtatcctccttgaaggattttccgct 20226775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25395479 - 25395515
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatt 37  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  25395479 ttttcggtttgatttgcaccctcgtaaattttttatt 25395515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 8e-22; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 221 - 302
Target Start/End: Original strand, 6860169 - 6860250
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaaca 302  Q
    |||||||||||||| |||||||||||| ||| | | ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  6860169 ttgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattccttccttggatatcatgtttactaaca 6860250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 9231563 - 9231651
Alignment:
Q  211 tctcttatca-ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttccta 299  Q
    |||||||||| |||||||||||||| |||||||||||||||| | ||||||||| |||||||||| ||||   |||||||||||||||||    
T  9231563 tctcttatcacttgtaatattcacttttatcatcaatagaaagattctttgagtattctctcatt-cttccacggatatcatgtttccta 9231651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 9664771 - 9664720
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtacctctctt 216  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  9664771 actagtttagttactatataagtcacatggttgactcatttgtacctatctt 9664720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 221 - 304
Target Start/End: Complemental strand, 14618816 - 14618732
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatc-tttgagttttctctcattccttcattggatatcatgtttcctaacatg 304  Q
    ||||||| |||||| |||||||||||| |||  ||  |||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  14618816 ttgtaatgttcacttttatcatcaatacaaaacattatttgagttttctttcattccttccttggatatcatgtttactaacatg 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19591361 - 19591399
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19591361 ttttcggtttgatttgcaccctcataaaatttttatttt 19591399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2255587 - 2255549
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2255587 ttttcggtttgatttgcaccctcgtaaaatttttatttt 2255549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2965633 - 2965671
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2965633 ttttcggtttgatttgcaccctcgtaaaatttttatttt 2965671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2965796 - 2965758
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2965796 ttttcggtttgatttgcaccctcgtaaaatttttatttt 2965758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4407929 - 4407967
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4407929 ttttcggtttgatttgcaccctcgtaaaatttttatttt 4407967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4408092 - 4408054
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  4408092 ttttcggtttgatttgcaccctcgtaaaatttttatttt 4408054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9887876 - 9887838
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9887876 ttttcggtttgatttccaccctcataaaatttttatttt 9887838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9964577 - 9964539
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  9964577 ttttcggtttgatttgcaccctcgtaaaatttttatttt 9964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 10774597 - 10774543
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattc 275  Q
    |||||||||||||| |||||||||||| ||| | | |||||||||||||||||||    
T  10774597 ttgtaatattcacttttatcatcaatacaaacattatttgagttttctctcattc 10774543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16127332 - 16127294
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  16127332 ttttcggtttgatttgcaccctcgtaaaatttttatttt 16127294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27660599 - 27660561
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  27660599 ttttcggtttgatttgcaccctcataaaaattttatttt 27660561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 787298 - 787343
Alignment:
Q  165 actagtttagttactatataagtcacaaggttgactcatttgtacc 210  Q
    ||||||||||||||||||||||||| | | ||||||||||||||||    
T  787298 actagtttagttactatataagtcatatgattgactcatttgtacc 787343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2039520 - 2039479
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  2039520 ttttcggtttgatttgcaatctcataaaatttttatttttcg 2039479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18699060 - 18699101
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  18699060 ttttcggtttgatttacaccctcgtaaaatttttatttttcg 18699101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28038955 - 28038996
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||| ||| ||||||||||||||||||    
T  28038955 ttttcggtttgatttgcacactcgtaaaatttttatttttcg 28038996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6176916 - 6176876
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  6176916 ttttcggtttgatttgcaccctcgtaaaaattttatttttc 6176876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 8655889 - 8655785
Alignment:
Q  240 catcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    |||||||||||| | | | | ||||||||||| |||||||  |||||  |||||||||||||||| ||||| |||     ||||| ||||||||||||||    
T  8655889 catcaatagaaagagtttcttagttttctctccttccttctatggatgccatgtttcctaacatggtatcagagcttatctggtacccaccttgaaggat 8655790  T
Q  340 tttcc 344  Q
    |||||    
T  8655789 tttcc 8655785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 18699222 - 18699182
Alignment:
Q  2 tttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||||||||||||||| |||||||| |||||||||    
T  18699222 tttcggtttgatttgcaccctcgtaaaatttgtatttttcg 18699182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 23343905 - 23343979
Alignment:
Q  261 agttttctctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    |||||||||||||||||||||||||||| |||||||  |||||| ||||| ||  |   ||||||||||||||||||||    
T  23343905 agttttctctcattccttcattggatataatgtttc--aacatggtatcagag--aacctggtatccaccttgaaggat 23343979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Original strand, 29427400 - 29427477
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcattccttcattggatatcatgtttcctaa 300  Q
    |||||||||||||| |||||  ||||| ||| | | ||| ||||||||||||||||||| ||| ||||||||||| ||||    
T  29427400 ttgtaatattcacttttatc--caatacaaacattatttaagttttctctcattccttccttgaatatcatgtttactaa 29427477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 6825542 - 6825475
Alignment:
Q  268 tctcattccttcattggatatcatgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    |||| |||||||  |||||  |||||||||||||||| ||| | |||| |||||||||||||||||||    
T  6825542 tctccttccttccatggatgccatgtttcctaacatggtattagagcatgattggtatccaccttgaa 6825475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 787424 - 787474
Alignment:
Q  289 catgtttcctaacatgctatcaaagcaagattggtatccaccttgaaggat 339  Q
    |||||||||||||||| ||||| |||||   ||||||||||||||||||||    
T  787424 catgtttcctaacatggtatcagagcaaatatggtatccaccttgaaggat 787474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2039358 - 2039396
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  2039358 ttttcagtttgatttgcaccctcgtaaaatttttatttt 2039396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7850723 - 7850685
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  7850723 tttttggtttgatttgcaccctcgtaaaatttttatttt 7850685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9865253 - 9865215
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  9865253 ttttcggtttgacttgcaccctcgtaaaatttttatttt 9865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18771901 - 18771939
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  18771901 tttttggtttgatttgcaccctcgtaaaatttttatttt 18771939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19591524 - 19591486
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  19591524 ttttcggtttgatttgcaccctcgtaaaaattttatttt 19591486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22043739 - 22043701
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  22043739 ttttcggtttgatttgcacccttgtaaaatttttatttt 22043701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25948852 - 25948814
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  25948852 ttttcggtttgattggcaccctcgtaaaatttttatttt 25948814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 28039118 - 28039080
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  28039118 ttttcggtttgatttgcaccctcgtaaaaattttatttt 28039080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30240789 - 30240751
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  30240789 ttttcggtttgatttgcaccctcgtaaaaattttatttt 30240751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 14349142 - 14349101
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  14349142 ttttcgatttgatttgcaccttcgtaaaatttttatttttcg 14349101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34204967 - 34204926
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||||||||| |||||||||||| |||| |||||||||||||    
T  34204967 ttttcggtttaatttgcaccctcgtaaattttttatttttcg 34204926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15590 - 15552
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15590 ttttcggtttgatttgcaccctcataaaatttttatttt 15552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15427 - 15465
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  15427 ttttcggtttgatttgcaccctcgtaaaatttttatttt 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 146733 - 146687
Alignment:
Q  289 catgtttcctaacatgctatcaaagcaagattggtatccaccttgaa 335  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  146733 catgtttcctaacatggtatcaaagcatgattggtatccaccttgaa 146687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 403692 - 403654
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  403692 ttttcggtttgatttgcaccctcgtaaaatttttatttt 403654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 57451 - 57492
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  57451 ttttcggtttgatttgcaccctcgtaaaatttttatttttcg 57492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 62309 - 62271
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  62309 ttttcggtttgatttgcaccctcgtaaaatttttatttt 62271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 57613 - 57575
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  57613 ttttcggtttgatttgcaccctcgtaaaaattttatttt 57575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7560 - 7520
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttc 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  7560 ttttcggtttgatttgcaccctcgtaaaatttttatttttc 7520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7397 - 7438
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    |||| |||||||||||||| ||| ||||||||||||||||||    
T  7397 tttttggtttgatttgcactctcctaaaatttttatttttcg 7438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1364 - 1402
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1364 ttttcggtttgatttgcaccctcgtaaaatttttatttt 1402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2954 - 2992
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2954 ttttcggtttgattttcaccctcataaaatttttatttt 2992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9801 - 9763
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  9801 ttttcggtttgattttcaccctcataaaatttttatttt 9763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 125539 - 125498
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  125539 ttttcggtttgatttgcaccctcgtaaaaattttatttttcg 125498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3195 - 3157
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  3195 ttttcggtttgatttgcaccctcgtaaaaattttatttt 3157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6816 - 6778
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  6816 ttttcggtttgatttgcaccctcgtaaaaattttatttt 6778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4469 - 4431
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  4469 ttttcggtttgatttgcaccctcgtaaattttttatttt 4431  T

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Target: scaffold0420; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4305 - 4338
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaattttt 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  4305 ttttcggtttgatttgcaccctcgtaaaattttt 4338  T

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Target: scaffold0235 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12713 - 12675
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  12713 ttttcggtttgatttgcaccctcgtaaaaattttatttt 12675  T

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Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 24415 - 24377
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  24415 ttttcggtttgatttgcaccctcgtaaaaattttatttt 24377  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11903 - 11941
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  11903 ttttcggtttgatttgcgccctcgtaaaatttttatttt 11941  T

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Target: scaffold0199; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12065 - 12027
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  12065 ttttcggtttgatttgcgccctcgtaaaatttttatttt 12027  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4184 - 4146
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| |||| ||||||||||    
T  4184 ttttcggtttgatttgcaccctcgtaaattttttatttt 4146  T

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Target: scaffold0098; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4022 - 4059
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttattt 38  Q
    ||||||||||||||||||||||| ||||| ||||||||    
T  4022 ttttcggtttgatttgcaccctcgtaaaaattttattt 4059  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 72403 - 72365
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  72403 ttttcggtttgatttgcaccctcgtaaaaattttatttt 72365  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 92889 - 92851
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  92889 ttttcagtttgatttgcaccctcgtaaaatttttatttt 92851  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 142317 - 142355
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  142317 tttttggtttgatttgcaccctcgtaaaatttttatttt 142355  T

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Target: scaffold0148 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24653 - 24612
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||| | ||||||| ||||||||||||||||||    
T  24653 ttttcggtttgatattcaccctcgtaaaatttttatttttcg 24612  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 183027 - 183080
Alignment:
Q  221 ttgtaatattcactattatcatcaatagaaataatctttgagttttctctcatt 274  Q
    |||||||||||||| |||||||||| ||||| | |  |||||||||||||||||    
T  183027 ttgtaatattcacttttatcatcaaaagaaagattacttgagttttctctcatt 183080  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 250028 - 249987
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttttatttttcg 42  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||    
T  250028 ttttcggtttgatttgctccctcgtaaaaattttatttttcg 249987  T

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Target: scaffold0284 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3532 - 3500
Alignment:
Q  1 ttttcggtttgatttgcaccctcataaaatttt 33  Q
    ||||||||||||||||||||||| |||||||||    
T  3532 ttttcggtttgatttgcaccctcgtaaaatttt 3500  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 96666 - 96630
Alignment:
Q  3 ttcggtttgatttgcaccctcataaaatttttatttt 39  Q
    ||||||||||||||||||||  |||||||||||||||    
T  96666 ttcggtttgatttgcaccctggtaaaatttttatttt 96630  T

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