View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6302_low_19 (Length: 253)
Name: NF6302_low_19
Description: NF6302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6302_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 38532488 - 38532705
Alignment:
| Q |
21 |
cagaccaatatcacaacgagtatttctacaacggactttgatcaagtaagaacatgtcttctccttggccatgattaccgtttcaaacaaccaagttgtc |
120 |
Q |
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| T |
38532488 |
cagatcaatatcacaacgagtatttctacaacggactttgatcaagtaagaacatgtcttctccttggccatgattaccgtttcaaccaaccaagttgtc |
38532587 |
T |
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| Q |
121 |
catacagaagc---tgttatgttccaacagaagcttttcaacaagtttttatttgtttcctatcccaaaatatcatttgtacacaactacatagtctaat |
217 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
38532588 |
catacagaagctgttgttatgttccaacagaagcttttcaacaagtttttatttgtttactatcccaaaatatcatttgtacacaactacatagtctaat |
38532687 |
T |
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| Q |
218 |
atatttgagaatctgaag |
235 |
Q |
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|||||||||||||||||| |
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| T |
38532688 |
atatttgagaatctgaag |
38532705 |
T |
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