View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6303_high_3 (Length: 274)
Name: NF6303_high_3
Description: NF6303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6303_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 31017735 - 31017993
Alignment:
| Q |
1 |
tttctgtaatatttagcatttcatattttgttaagttccaaacttcctgtttcccttccaaattgtaggnnnnnnntgagtgaaatcgataactaacaat |
100 |
Q |
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| T |
31017735 |
tttctgtaatatttagcatttcctattttgttaagttccaaacttcctgtttcccttccaaattgtaggaaaacaatgagtgaaatcgataattaacaat |
31017834 |
T |
|
| Q |
101 |
gaacaataaaagctacctgcaaggaattttaagaaagttgctcccaccaatgtccgtggcttaactgtcaaggcaaacaacattagtgacagatcacatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31017835 |
gaacaataaaagctacctgcaaggaattttaagaaagttgctcccaccagtgtccgtggcttaactgtcaaagcaaacaacattagtgacagatcacatc |
31017934 |
T |
|
| Q |
201 |
ataatcaaattcaa-tcattacttgggaaaggcatctattatgaattcatgatatatgt |
258 |
Q |
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|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31017935 |
ataatcaaattcaattcattacttggggaaggcatctattatgaattcatgatatatgt |
31017993 |
T |
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