View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6303_high_5 (Length: 264)
Name: NF6303_high_5
Description: NF6303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6303_high_5 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 39148170 - 39148411
Alignment:
| Q |
9 |
cagaacctgtggaatgtgaccaacgaaccttggatagcttatgatattgtaatgaaaaatgttcaaatatatttcgataatgtgattataatatgatgac |
108 |
Q |
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| T |
39148170 |
cagaacatatggaatgtgaccaacgaaccttggatagcctatgatattgtaatgaaaaatgttcaaatatatttcgataatgtgattataatatgatgac |
39148269 |
T |
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| Q |
109 |
tattctatttgaaatttaaatagagaaaaatgtagacctgatgaggcggaccacatactacaaaataaaagtaagagtaaatcacactttcctttcataa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39148270 |
tattctatttgaaatttaaatagagaaaaatgtagacctgatgaggcggaccacatactacaaaataaaagtaagagtaaatcacactttccttctataa |
39148369 |
T |
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| Q |
209 |
gagatacttaaattacaccaccgtcctatcttatgtcaaaat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
39148370 |
gagatacttaaattacaccaccgtcctatcttatgtcaaaat |
39148411 |
T |
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