View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6304_high_16 (Length: 290)

Name: NF6304_high_16
Description: NF6304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6304_high_16
NF6304_high_16
[»] chr6 (47 HSPs)
chr6 (118-283)||(7354610-7354774)
chr6 (3-94)||(5970126-5970217)
chr6 (16-95)||(12868706-12868785)
chr6 (3-94)||(7938060-7938157)
chr6 (3-98)||(8776991-8777092)
chr6 (3-94)||(9107388-9107485)
chr6 (3-93)||(16766642-16766738)
chr6 (3-92)||(12696277-12696365)
chr6 (51-96)||(10294049-10294094)
chr6 (22-94)||(8713929-8714001)
chr6 (3-98)||(34225827-34225920)
chr6 (5-94)||(3209326-3209421)
chr6 (3-58)||(10842518-10842573)
chr6 (3-58)||(17841607-17841662)
chr6 (14-96)||(426543-426631)
chr6 (14-93)||(31959111-31959189)
chr6 (14-93)||(20371139-20371219)
chr6 (22-94)||(3398569-3398641)
chr6 (14-93)||(7377930-7378009)
chr6 (47-94)||(18367781-18367828)
chr6 (3-85)||(28715256-28715336)
chr6 (3-94)||(7977848-7977945)
chr6 (26-95)||(9027121-9027196)
chr6 (3-58)||(5732528-5732583)
chr6 (14-93)||(7801185-7801259)
chr6 (14-94)||(8365548-8365628)
chr6 (3-58)||(16833294-16833349)
chr6 (33-79)||(16488638-16488684)
chr6 (3-74)||(34595098-34595175)
chr6 (22-55)||(32978937-32978970)
chr6 (14-79)||(853888-853959)
chr6 (48-88)||(31673555-31673595)
chr6 (3-92)||(9658832-9658920)
chr6 (3-58)||(10770692-10770747)
chr6 (12-94)||(12686421-12686508)
chr6 (3-58)||(28152085-28152139)
chr6 (3-58)||(1191718-1191775)
chr6 (3-94)||(1681702-1681799)
chr6 (22-96)||(17168842-17168916)
chr6 (3-57)||(26562676-26562730)
chr6 (14-52)||(33001318-33001356)
chr6 (14-63)||(2117057-2117106)
chr6 (53-90)||(4118407-4118444)
chr6 (3-52)||(19040344-19040393)
chr6 (6-58)||(7930291-7930343)
chr6 (26-94)||(19602222-19602290)
chr6 (22-58)||(23771565-23771601)
[»] chr3 (50 HSPs)
chr3 (1-95)||(10335302-10335402)
chr3 (3-94)||(14747511-14747603)
chr3 (3-94)||(21479068-21479159)
chr3 (3-97)||(3164043-3164143)
chr3 (3-96)||(11313818-11313909)
chr3 (1-74)||(33359730-33359804)
chr3 (198-283)||(2136608-2136693)
chr3 (1-95)||(10318051-10318156)
chr3 (33-94)||(14027959-14028018)
chr3 (3-94)||(15796312-15796409)
chr3 (14-65)||(40052311-40052362)
chr3 (48-94)||(750688-750734)
chr3 (3-94)||(34307798-34307895)
chr3 (3-94)||(35994756-35994852)
chr3 (3-79)||(10954916-10954993)
chr3 (9-94)||(39756186-39756271)
chr3 (3-58)||(10268504-10268559)
chr3 (23-94)||(32400743-32400809)
chr3 (3-57)||(4987309-4987363)
chr3 (3-93)||(16000034-16000130)
chr3 (51-94)||(7171446-7171489)
chr3 (22-85)||(14342420-14342483)
chr3 (3-50)||(14979175-14979222)
chr3 (3-58)||(55401061-55401116)
chr3 (3-65)||(20503444-20503506)
chr3 (48-94)||(24205110-24205156)
chr3 (3-74)||(28917965-28918042)
chr3 (3-69)||(34185141-34185207)
chr3 (3-44)||(1509539-1509580)
chr3 (14-55)||(14832088-14832129)
chr3 (3-52)||(25064901-25064950)
chr3 (3-52)||(26508102-26508151)
chr3 (3-52)||(34910309-34910358)
chr3 (22-58)||(3865593-3865629)
chr3 (22-58)||(14829676-14829712)
chr3 (3-94)||(15864789-15864874)
chr3 (3-58)||(1514603-1514658)
chr3 (3-58)||(8587039-8587094)
chr3 (1-44)||(51206369-51206412)
chr3 (59-93)||(17568750-17568784)
chr3 (14-79)||(8789579-8789644)
chr3 (3-52)||(14209105-14209154)
chr3 (5-58)||(23870579-23870632)
chr3 (34-79)||(35222903-35222948)
chr3 (55-96)||(52369737-52369778)
chr3 (64-96)||(13845584-13845616)
chr3 (14-58)||(18426935-18426979)
chr3 (22-58)||(26492242-26492278)
chr3 (3-55)||(27505235-27505287)
chr3 (4-52)||(28812507-28812555)
[»] chr1 (54 HSPs)
chr1 (3-94)||(22881634-22881725)
chr1 (14-94)||(38078690-38078771)
chr1 (3-94)||(398783-398880)
chr1 (14-93)||(6415030-6415110)
chr1 (26-93)||(3490431-3490498)
chr1 (15-94)||(17831561-17831640)
chr1 (3-94)||(6612189-6612286)
chr1 (5-94)||(10474997-10475086)
chr1 (3-94)||(14359540-14359623)
chr1 (1-85)||(48040477-48040568)
chr1 (3-58)||(22515905-22515960)
chr1 (3-95)||(42359467-42359565)
chr1 (48-94)||(10577804-10577850)
chr1 (3-96)||(18190126-18190217)
chr1 (3-93)||(1486727-1486823)
chr1 (7-93)||(9103585-9103677)
chr1 (3-79)||(24577204-24577280)
chr1 (23-79)||(35702626-35702682)
chr1 (3-58)||(46348401-46348456)
chr1 (3-52)||(113291-113340)
chr1 (4-94)||(21366039-21366135)
chr1 (3-55)||(12443478-12443530)
chr1 (22-94)||(24334743-24334810)
chr1 (14-57)||(1262871-1262914)
chr1 (3-58)||(18556474-18556529)
chr1 (3-58)||(48450605-48450660)
chr1 (22-93)||(31694749-31694824)
chr1 (3-94)||(38503264-38503361)
chr1 (16-75)||(40917714-40917779)
chr1 (53-94)||(25934572-25934613)
chr1 (49-94)||(48548032-48548077)
chr1 (3-94)||(36878417-36878502)
chr1 (48-96)||(41597539-41597587)
chr1 (22-65)||(6427440-6427483)
chr1 (48-91)||(23531847-23531890)
chr1 (3-58)||(31672913-31672968)
chr1 (3-58)||(39953164-39953219)
chr1 (47-94)||(40173647-40173694)
chr1 (4-58)||(2896140-2896194)
chr1 (26-96)||(22907380-22907450)
chr1 (22-96)||(29144395-29144474)
chr1 (16-58)||(37598818-37598860)
chr1 (26-64)||(38076011-38076049)
chr1 (54-96)||(40456031-40456073)
chr1 (3-94)||(21378529-21378619)
chr1 (3-52)||(32461481-32461530)
chr1 (14-58)||(1705021-1705065)
chr1 (66-94)||(2218225-2218253)
chr1 (22-58)||(5944267-5944303)
chr1 (14-65)||(17778530-17778579)
chr1 (3-51)||(23652992-23653040)
chr1 (14-46)||(23738676-23738708)
chr1 (51-91)||(26830542-26830582)
chr1 (14-46)||(32434745-32434777)
[»] chr2 (34 HSPs)
chr2 (23-94)||(26769461-26769532)
chr2 (3-94)||(21374717-21374809)
chr2 (14-79)||(38117188-38117253)
chr2 (3-94)||(2438737-2438831)
chr2 (3-94)||(20539692-20539783)
chr2 (3-98)||(30335357-30335458)
chr2 (34-94)||(36096424-36096484)
chr2 (3-93)||(44860273-44860361)
chr2 (3-65)||(37986758-37986820)
chr2 (3-94)||(23717977-23718067)
chr2 (3-94)||(24105649-24105739)
chr2 (3-96)||(6940203-6940296)
chr2 (3-92)||(21616708-21616803)
chr2 (48-94)||(18631468-18631514)
chr2 (22-93)||(21624217-21624288)
chr2 (3-69)||(29176511-29176577)
chr2 (22-94)||(1886915-1886985)
chr2 (3-93)||(18276466-18276562)
chr2 (14-58)||(24894375-24894419)
chr2 (22-58)||(27460012-27460048)
chr2 (14-58)||(37558963-37559007)
chr2 (3-74)||(18889609-18889679)
chr2 (1-94)||(24975341-24975431)
chr2 (3-94)||(28677852-28677950)
chr2 (3-58)||(30404868-30404923)
chr2 (3-69)||(12748659-12748725)
chr2 (22-94)||(14996261-14996332)
chr2 (3-57)||(21782836-21782890)
chr2 (60-94)||(27447082-27447116)
chr2 (48-94)||(28412294-28412340)
chr2 (48-94)||(34785051-34785097)
chr2 (26-58)||(22550283-22550315)
chr2 (3-47)||(36409645-36409689)
chr2 (3-74)||(42832294-42832366)
[»] chr8 (40 HSPs)
chr8 (1-58)||(5813578-5813635)
chr8 (3-94)||(20785483-20785574)
chr8 (14-94)||(22651920-22652006)
chr8 (3-94)||(2572074-2572171)
chr8 (22-93)||(24857954-24858031)
chr8 (16-94)||(29510335-29510419)
chr8 (3-94)||(22197760-22197857)
chr8 (3-96)||(22595948-22596035)
chr8 (3-79)||(8342939-8343013)
chr8 (3-63)||(13844614-13844674)
chr8 (34-96)||(3951586-3951646)
chr8 (3-58)||(15816147-15816202)
chr8 (5-95)||(16641994-16642082)
chr8 (48-95)||(24413629-24413676)
chr8 (48-95)||(43737882-43737929)
chr8 (48-93)||(926857-926902)
chr8 (3-94)||(4298904-4298994)
chr8 (3-92)||(4786356-4786445)
chr8 (14-58)||(13436993-13437037)
chr8 (14-58)||(25192376-25192420)
chr8 (3-58)||(8343302-8343357)
chr8 (3-58)||(20873055-20873110)
chr8 (3-58)||(39954297-39954352)
chr8 (6-52)||(27101507-27101553)
chr8 (3-63)||(18407700-18407760)
chr8 (14-58)||(30271320-30271364)
chr8 (3-69)||(25566818-25566882)
chr8 (43-94)||(29447413-29447464)
chr8 (3-58)||(30077405-30077460)
chr8 (3-58)||(36450772-36450827)
chr8 (48-94)||(18964115-18964161)
chr8 (48-94)||(21465370-21465416)
chr8 (16-58)||(24196628-24196670)
chr8 (3-57)||(41831958-41832012)
chr8 (3-52)||(24613513-24613561)
chr8 (14-55)||(31236606-31236647)
chr8 (3-52)||(31556989-31557037)
chr8 (22-58)||(4673462-4673498)
chr8 (48-96)||(29447189-29447237)
chr8 (14-58)||(41838152-41838196)
[»] chr7 (37 HSPs)
chr7 (14-94)||(9778452-9778530)
chr7 (3-98)||(25481842-25481943)
chr7 (7-92)||(11061098-11061189)
chr7 (22-95)||(24105628-24105700)
chr7 (4-94)||(8234096-8234186)
chr7 (22-96)||(25822603-25822677)
chr7 (3-84)||(24339596-24339683)
chr7 (14-89)||(42720919-42720994)
chr7 (15-94)||(1433398-1433483)
chr7 (48-94)||(18213103-18213149)
chr7 (50-92)||(21141053-21141095)
chr7 (30-94)||(18038944-18039009)
chr7 (48-93)||(35861903-35861948)
chr7 (1-94)||(43027485-43027578)
chr7 (14-94)||(5409865-5409951)
chr7 (3-58)||(9408352-9408407)
chr7 (3-58)||(15680795-15680850)
chr7 (55-94)||(17851375-17851414)
chr7 (3-58)||(23191882-23191937)
chr7 (3-58)||(32308106-32308161)
chr7 (54-92)||(1885519-1885557)
chr7 (48-94)||(5954208-5954254)
chr7 (48-94)||(9408410-9408456)
chr7 (3-94)||(27944991-27945082)
chr7 (3-94)||(30730981-30731078)
chr7 (3-93)||(33384600-33384690)
chr7 (14-64)||(45056930-45056980)
chr7 (3-95)||(1656627-1656717)
chr7 (14-51)||(18215215-18215252)
chr7 (3-44)||(19992001-19992042)
chr7 (14-51)||(35861957-35861994)
chr7 (12-57)||(40287383-40287428)
chr7 (3-94)||(13300362-13300451)
chr7 (15-55)||(20545266-20545306)
chr7 (25-65)||(21560477-21560517)
chr7 (22-58)||(21864792-21864828)
chr7 (3-51)||(29787387-29787435)
[»] chr5 (37 HSPs)
chr5 (1-94)||(36642778-36642876)
chr5 (22-94)||(15382421-15382499)
chr5 (14-69)||(31084298-31084353)
chr5 (3-94)||(21522694-21522791)
chr5 (3-94)||(21533260-21533357)
chr5 (3-89)||(13287417-13287509)
chr5 (3-58)||(14674255-14674310)
chr5 (3-95)||(22013363-22013455)
chr5 (14-79)||(2436887-2436952)
chr5 (3-81)||(21191074-21191158)
chr5 (3-92)||(11685898-11685980)
chr5 (6-94)||(19579645-19579739)
chr5 (48-95)||(23016060-23016107)
chr5 (49-95)||(20683324-20683370)
chr5 (14-58)||(42893346-42893390)
chr5 (3-58)||(39698527-39698582)
chr5 (3-57)||(6247609-6247663)
chr5 (48-94)||(6401442-6401488)
chr5 (3-96)||(6471907-6471998)
chr5 (4-58)||(19552562-19552616)
chr5 (33-79)||(21814226-21814272)
chr5 (14-51)||(10298562-10298599)
chr5 (3-52)||(33178017-33178066)
chr5 (49-94)||(34276801-34276846)
chr5 (14-92)||(41995417-41995501)
chr5 (26-93)||(32766984-32767049)
chr5 (3-58)||(21351923-21351978)
chr5 (3-69)||(21576763-21576830)
chr5 (3-58)||(27144449-27144504)
chr5 (22-95)||(30135263-30135335)
chr5 (3-79)||(42469180-42469262)
chr5 (48-94)||(6326366-6326412)
chr5 (48-94)||(6770487-6770533)
chr5 (44-90)||(16941973-16942018)
chr5 (3-52)||(41633727-41633776)
chr5 (14-46)||(7677703-7677735)
chr5 (53-93)||(28862262-28862302)
[»] chr4 (39 HSPs)
chr4 (22-94)||(42640476-42640548)
chr4 (14-94)||(23293015-23293101)
chr4 (3-94)||(15029715-15029806)
chr4 (6-95)||(4157101-4157187)
chr4 (5-62)||(50280863-50280920)
chr4 (3-94)||(3947784-3947874)
chr4 (23-96)||(7377317-7377390)
chr4 (3-94)||(37203222-37203305)
chr4 (22-79)||(7251664-7251721)
chr4 (3-85)||(35158003-35158091)
chr4 (22-94)||(20633429-20633507)
chr4 (22-96)||(28470339-28470411)
chr4 (48-95)||(44081646-44081693)
chr4 (3-93)||(47191011-47191099)
chr4 (3-94)||(2361993-2362092)
chr4 (3-94)||(12895292-12895389)
chr4 (3-94)||(24343451-24343548)
chr4 (22-94)||(28720827-28720898)
chr4 (17-95)||(12628617-12628694)
chr4 (3-88)||(27706195-27706286)
chr4 (22-58)||(30298932-30298968)
chr4 (22-58)||(30327800-30327836)
chr4 (22-69)||(15835676-15835723)
chr4 (14-94)||(19482612-19482698)
chr4 (14-96)||(21873400-21873480)
chr4 (14-96)||(21929261-21929341)
chr4 (3-58)||(21945489-21945544)
chr4 (47-94)||(52476313-52476360)
chr4 (48-94)||(5111589-5111635)
chr4 (14-52)||(12895145-12895183)
chr4 (3-92)||(30982896-30982988)
chr4 (59-97)||(46084046-46084084)
chr4 (22-52)||(49431017-49431047)
chr4 (26-76)||(56049845-56049895)
chr4 (14-95)||(11110711-11110787)
chr4 (14-58)||(11651163-11651207)
chr4 (3-51)||(14126129-14126177)
chr4 (22-58)||(22234928-22234964)
chr4 (48-96)||(36635266-36635314)
[»] scaffold0053 (1 HSPs)
scaffold0053 (3-94)||(8742-8839)
[»] scaffold0027 (1 HSPs)
scaffold0027 (3-94)||(46626-46723)
[»] scaffold0122 (1 HSPs)
scaffold0122 (22-93)||(7961-8032)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-96)||(71677-71745)
[»] scaffold0021 (1 HSPs)
scaffold0021 (3-94)||(130426-130523)
[»] scaffold0652 (1 HSPs)
scaffold0652 (3-92)||(480-575)
[»] scaffold0171 (1 HSPs)
scaffold0171 (3-96)||(23369-23461)
[»] scaffold0103 (1 HSPs)
scaffold0103 (3-58)||(51797-51852)
[»] scaffold0066 (1 HSPs)
scaffold0066 (3-69)||(33381-33445)
[»] scaffold0044 (1 HSPs)
scaffold0044 (3-79)||(53143-53221)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-58)||(241580-241635)
[»] scaffold0223 (1 HSPs)
scaffold0223 (3-94)||(20122-20213)
[»] scaffold0116 (1 HSPs)
scaffold0116 (48-94)||(9842-9888)
[»] scaffold0361 (1 HSPs)
scaffold0361 (3-54)||(14520-14571)
[»] scaffold0227 (1 HSPs)
scaffold0227 (3-54)||(7329-7380)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-51)||(17767-17815)
[»] scaffold0007 (1 HSPs)
scaffold0007 (26-94)||(225309-225383)
[»] scaffold0475 (1 HSPs)
scaffold0475 (51-92)||(3262-3303)
[»] scaffold0136 (1 HSPs)
scaffold0136 (53-94)||(3928-3969)
[»] scaffold0306 (1 HSPs)
scaffold0306 (14-58)||(13386-13430)
[»] scaffold0152 (1 HSPs)
scaffold0152 (14-58)||(21897-21941)
[»] scaffold0049 (1 HSPs)
scaffold0049 (62-94)||(63709-63741)
[»] scaffold0018 (1 HSPs)
scaffold0018 (22-58)||(178856-178892)


Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 7354610 - 7354774
Alignment:
Q  118 gttcatgacggcaaagaaaatgttagctcaatgaaaatgctttgatcaatgtagccaaattattggaagtgatatttaattgttaaagtttatttcacaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7354610 gttcatgacggcaaagaaaatgttagctcaatgaaaatgctttgatcaatgtagccaaattattggaagtgatatt-aattgttaaagtttatttcacaa 7354708  T
Q  218 agataattgatgtaagcattgtttatcttgtacagtccctcatgtatctaccactcgcctttgcta 283  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  7354709 agataattgatgtaagcattgttcatcttgtacagtccctcatgtatctaccactcgccattgcta 7354774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 5970126 - 5970217
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||||||| |||||||||||    
T  5970126 ttacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcatag 5970217  T

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Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 12868706 - 12868785
Alignment:
Q  16 tgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||| || |||||||||| |||||||||||    
T  12868706 tgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcgtgtccggtgtccgagtccgtatccctgcttcataga 12868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 7938157 - 7938060
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||| ||| |||||||||||||||||||||||||||      ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  7938157 ttacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 8776991 - 8777092
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || | ||||| |||||||||||||||| |||||||||||||      |||||||||||||| ||| ||||||||||||||||||||||||||    
T  8776991 ttacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtgcttcatagat 8777090  T
Q  97 at 98  Q
    ||    
T  8777091 at 8777092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 9107388 - 9107485
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || | ||||| ||||||||||||||||||||||||||||||      |||||||||||||||||| |||||| |||||||||||||||||    
T  9107388 ttacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcagtatccgtgcttcatag 9107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 16766738 - 16766642
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||      ||||| ||||||||||||||| ||||||||||||| |||||||||    
T  16766738 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 12696365 - 12696277
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| || ||||| | ||||||||||||||||||||||||||||||| |||| ||||||  |||| ||||||||||||||||||||||    
T  12696365 ttacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgtccgtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 10294094 - 10294049
Alignment:
Q  51 tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10294094 tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 10294049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 8714001 - 8713929
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||| |||||||| ||||||| |||| |||||||||| |||||||||||  |||||||||||    
T  8714001 tttttcaaattattaactgtgtcgacgtgtccatgtcatgtccggtgtccgtgtccgtatttgtgcttcatag 8713929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 34225827 - 34225920
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagatat 98  Q
    ||||||| || |||| || |||||||||||||||| |||||| |  ||||| | |||||||| |||| ||||||||||||||||||||||||||||    
T  34225827 ttacactgaattatgcgattttttcaaattattagttgtgtcag--tgtccttatcgtgtccagtgtccgtgtccgtatccgtgcttcatagatat 34225920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 3209421 - 3209326
Alignment:
Q  5 acactaaaatatgtgacttttt-caaattattagctgtgtcggcgtgtc-----cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||     ||||||||||||||||| |||||  ||||||||||| |||||    
T  3209421 acactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtcgtgtcgtgtccggtgtccgtgtttgtatccgtgctacatag 3209326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 10842573 - 10842518
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  10842573 ttacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 17841607 - 17841662
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  17841607 ttacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 17841662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 426543 - 426631
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| ||||||||||||||| ||||||||||      |||||||||||||||||||| | |||||| |||||| ||||||||||||    
T  426543 tatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcatagat 426631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 31959189 - 31959111
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtg-tcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||| |||||||   ||| |||||||||||||||||||||||    
T  31959189 tatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtc--atgtccgtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 20371139 - 20371219
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| ||| ||||||||||||| |||||||||||||  ||| |||||||||| |  ||||||||||||||||||||||    
T  20371139 tatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccggtttctgtgtccgtatccgtgcttcata 20371219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 3398641 - 3398569
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcg-tgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||||||||||||||||||| |||| ||||||  ||||||| ||||||||||| ||||||||||    
T  3398641 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 7378009 - 7377930
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| ||| ||||||| ||||| ||||||| ||||| |||| |||||||||||  | ||||||||||||||||||||    
T  7378009 tatgtgattttctcaaatttttagcggtgtcggggtgtctgtgttgtgtccggtgtctgggtccgtatccgtgcttcata 7377930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 18367828 - 18367781
Alignment:
Q  47 cgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  18367828 cgtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 18367781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 28715336 - 28715256
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgt 85  Q
    ||||||| || ||||| | ||||||||||||||||| ||||| |  ||||||| ||||||||||||| |||||||||||||||    
T  28715336 ttacactgaattatgtcattttttcaaattattagccgtgtcag--tgtccgtatcgtgtccggtgtccgtgtccgtatccgt 28715256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 7977848 - 7977945
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | |||||||||||||||||||||||||||||      ||| |||||||||| |||| ||||||| ||||||||||| ||||    
T  7977848 ttacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgtgtccatatccgtgctttatag 7977945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 9027196 - 9027121
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||||||||| |||||||||||||      |||||||||||||| || |||||||||||| ||||||||||||    
T  9027196 tcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcataga 9027121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 5732528 - 5732583
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||||||||||| ||| ||||||||||| | ||||||||||||| |||||    
T  5732528 ttacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 7801185 - 7801259
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| |||||||||||||||| |||||||||||||     | |||| |||| | |||||||||||||||||||||||    
T  7801185 tatgtgattttttcaaattattagttgtgtcggcgtgt-----tagtgttcggtatccgtgtccgtatccgtgcttcata 7801259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 8365548 - 8365628
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgt-tcgtgtccgtatccgtgcttcatag 94  Q
    |||||||  ||||||||||||||| |||||||||||||| ||||| |||||  |||| | |||||||||||||||||||||||    
T  8365548 tatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc--gtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 16833349 - 16833294
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| |||||||||||||||| |||||||||||||| |||||    
T  16833349 ttacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 16488638 - 16488684
Alignment:
Q  33 attagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||    
T  16488638 attagctgtgtcggcgtgtccatgtcgtttccggtgtccgtgtccgt 16488684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 34595175 - 34595098
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtg 74  Q
    ||||||| || ||||||| |||||||||||||||| ||||||||||      ||||||||||||||||||||| ||||    
T  34595175 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtg 34595098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 32978937 - 32978970
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    ||||||||||||||||||||||||||||||||||    
T  32978937 tttttcaaattattagctgtgtcggcgtgtccgt 32978970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 853888 - 853959
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| |||||||||||||||| ||||||||||||      ||||||||||||||||||| ||| |||||    
T  853888 tatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgt 853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 31673555 - 31673595
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgct 88  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  31673555 gtgtccgtgccgtgtccggtgtccgtgtccgtatccgtgct 31673595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 9658920 - 9658832
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| || ||||||| ||| | ||||||||||| ||||||||||||| |||| ||||||  ||||  ||||| |||||||||||||||    
T  9658920 ttacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc--gtgtctgtgtctgtatccgtgcttcat 9658832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 10770692 - 10770747
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| |||||||||||||||| ||||| |||||||| |||||    
T  10770692 ttacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtc 10770747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 12686421 - 12686508
Alignment:
Q  12 aatatgtgactttttcaaattattagctgtgtcggcgtgtc-----cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||| ||| | ||||||||||| ||||||| || ||     ||||||||||| ||||||||||||| |||||||| |||||||    
T  12686421 aatatgtgattttcttaaattattagcagtgtcggtgtatcaatgtcgtgtcgtgtctggtgttcgtgtccatatccgtgtttcatag 12686508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 28152139 - 28152085
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| |||||||||||||||||| |||||||||||| |||||    
T  28152139 ttacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtc 28152085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 1191718 - 1191775
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcg--gcgtgtccgtgtc 58  Q
    ||||||| || | ||||| ||||||||||||||||||||||||  |||||||||||||    
T  1191718 ttacactgaattttgtgaatttttcaaattattagctgtgtcggcgcgtgtccgtgtc 1191775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 1681799 - 1681702
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || || |||| |||||||||||||||| |||||||||      ||||  ||||||||| ||||||  ||||| |||||||||||||||||    
T  1681799 ttacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcatag 1681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 17168916 - 17168842
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||| |  ||||| |||||  ||||||||| |||||| |||||| | ||| |||||||||||||    
T  17168916 tttttcaaattattatcaatgtcgacgtgtttgtgtcgtgttcggtgtccgtgtctgaatctgtgcttcatagat 17168842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 26562730 - 26562676
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| || ||||||| ||| ||||||| ||||| ||||||||||||||||||    
T  26562730 ttacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgt 26562676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 33001318 - 33001356
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  33001318 tatgtgattttttcaaattattagcagtgtcggcgtgtc 33001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 2117106 - 2117057
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtc 63  Q
    ||||||| ||||||||||||||||  ||||||| |||||||| |||||||    
T  2117106 tatgtgattttttcaaattattagaggtgtcggagtgtccgtatcgtgtc 2117057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 4118407 - 4118444
Alignment:
Q  53 cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttc 90  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  4118407 cgtgtcgtgtccggtgtccgtgtccgtatcagtgcttc 4118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 19040393 - 19040344
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| ||| ||||||||||||| |||||||||||||    
T  19040393 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 19040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7930343 - 7930291
Alignment:
Q  6 cactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||||| |||||||||||||||  ||||||||| |||| |||||    
T  7930343 cactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtc 7930291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 19602222 - 19602290
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||| | |||| || |||||||||| ||||||||||| | |||| || | ||||||||||||    
T  19602222 tcaaattattatcagtgttggtgtgtccgtgttgtgtccggtgtccatgtctgtgttcgtgcttcatag 19602290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 23771601 - 23771565
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  23771601 ttttttaaattattaactgtgtcggcgtgtccgtgtc 23771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10335302 - 10335402
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||      |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  10335302 atttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T
Q  95 a 95  Q
    |    
T  10335402 a 10335402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 14747603 - 14747511
Alignment:
Q  3 ttacactaaaatatgtgacttttt-caaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  14747603 ttacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 21479159 - 21479068
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  21479159 ttacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 3164043 - 3164143
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||||| |||||||||||||||||||||||| ||||      ||||||||||||||||||| |||||| |||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatagat 3164142  T
Q  97 a 97  Q
    |    
T  3164143 a 3164143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 11313818 - 11313909
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||| ||||||| ||| ||||||||||||| |||||||  |||| || |||| ||| |||||||||||||||||||||||||||||||    
T  11313818 ttacactaaattatgtgattttctcaaattattagcagtgtcgg--tgtctgtttcgtctcccgtgttcgtgtccgtatccgtgcttcatagat 11313909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33359804 - 33359730
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtg 74  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||    
T  33359804 atttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtccggtgtccgtg 33359730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 283
Target Start/End: Original strand, 2136608 - 2136693
Alignment:
Q  198 tgttaaagtttatttcacaaagataattgatgtaagcattgtttatcttgtacagtccctcatgtatctaccactcgcctttgcta 283  Q
    |||| ||||||||| | |||||||||||||||||||  ||||||||||||||||||||||| ||||||| ||| ||||| ||||||    
T  2136608 tgttgaagtttattactcaaagataattgatgtaagtgttgtttatcttgtacagtccctcctgtatctcccattcgccattgcta 2136693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10318051 - 10318156
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcgg------------cgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgct 88  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||            ||||||||||||||||||||||| ||||| ||||||||||||    
T  10318051 atttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgct 10318149  T
Q  89 tcataga 95  Q
    |||||||    
T  10318150 tcataga 10318156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 14028018 - 14027959
Alignment:
Q  33 attagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  14028018 attagctgtgtcgg--tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 15796312 - 15796409
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||| ||| ||||||||||||||| |||||||||||||||      ||||||||||||||||| ||||||| ||||||||||||||||    
T  15796312 ttacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 40052362 - 40052311
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  40052362 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccg 40052311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 750688 - 750734
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  750688 gtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 34307798 - 34307895
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcg------tgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||||||| ||| ||||||||||||| ||||| |||||| ||||||       |||||||||||||||||||||||| ||||||||||    
T  34307798 ttacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcatag 34307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 35994756 - 35994852
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| |||||||||||||||||||||||||| ||||      | ||||||||||||||| | ||||||||||||||||||||||    
T  35994756 ttacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcatag 35994852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 10954993 - 10954916
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtg-tcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| || ||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||| ||| |||||    
T  10954993 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtccggtgtccgtatccgt 10954916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 39756271 - 39756186
Alignment:
Q  9 taaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||| ||||||| ||||| |||||||||  | |||||||||||| |||||||||||| ||| ||| ||| ||||||||||||||||    
T  39756271 taaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtcgtgtccgatgtccgtatccatatccgtgcttcatag 39756186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 10268504 - 10268559
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  10268504 ttacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 32400743 - 32400809
Alignment:
Q  23 ttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||||||||||| ||||||      ||||||||||||||||||||||||| ||||||||||    
T  32400743 ttttcaaattattagctgtgtcgccgtgtc-----agtgtccggtgttcgtgtccgtatccatgcttcatag 32400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 4987309 - 4987363
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||    
T  4987309 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 16000034 - 16000130
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc------gtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| || ||||| | ||||| |||||||||| |||||||||||||| |||||      |||| |||||| |||||||||||||||||||||||    
T  16000034 ttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 7171489 - 7171446
Alignment:
Q  51 tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  7171489 tccgtgtcgtgtccggtgtctgtgtccgtatccgtgcttcatag 7171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 14342483 - 14342420
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgt 85  Q
    ||||||| |||||||| ||||||||||| ||||| ||||||| ||| ||||||||||| |||||    
T  14342483 tttttcatattattagttgtgtcggcgtatccgtatcgtgtcaggtattcgtgtccgtgtccgt 14342420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 14979222 - 14979175
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg 50  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||    
T  14979222 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 55401116 - 55401061
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||| || |||||    
T  55401116 ttacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtc 55401061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 20503506 - 20503444
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    ||||||| || ||||| | |||||||||||||| | |||||||||||||| ||||||||||||    
T  20503506 ttacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtcgtgtccg 20503444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 24205110 - 24205156
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||    
T  24205110 gtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatag 24205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 28918042 - 28917965
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtg 74  Q
    ||||||| || ||||||| |||||||||||||||||| ||||||||||      ||||||||||||||||||| ||||    
T  28918042 ttacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgtg 28917965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 34185141 - 34185207
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| || | ||||| ||||| ||||||||||| |||||||||||||  |||||||||||||||    
T  34185141 ttacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtcgtgtccggtgt 34185207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 1509580 - 1509539
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtc 44  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  1509580 ttacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 14832129 - 14832088
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  14832129 tatgtgattttttcaaattattagctgtatcggcgtgtccgt 14832088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 25064950 - 25064901
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    |||||||||| ||||||| |||||||||| |||||| |||||||||||||    
T  25064950 ttacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtc 25064901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 26508151 - 26508102
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| ||||||||||||||||||||||| |||||||    
T  26508151 ttacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtc 26508102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 34910358 - 34910309
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| |||||||||||||||| ||||||||||||||    
T  34910358 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3865593 - 3865629
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  3865593 tttttcaaattattagctgtgtcggcgtgtcagtgtc 3865629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14829712 - 14829676
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14829712 tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 15864874 - 15864789
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||| | | ||||||||||||||| | |||||||||||||      ||||||||||| |||||| || ||||||||||||||    
T  15864874 ttacactaaattatatcattttttcaaattattatccgtgtcggcgtgtc------gtgtccggtgtccgtgtctgtgtccgtgcttcatag 15864789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 1514658 - 1514603
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| |||| |  | ||||||||||||||| |||||||||||||||||||    
T  1514658 ttacactaaattatgcgtttctttcaaattattagcggtgtcggcgtgtccgtgtc 1514603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 8587039 - 8587094
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| |||||||||||| ||| |||||||||||||| |||||    
T  8587039 ttacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtc 8587094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51206369 - 51206412
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtc 44  Q
    ||||||||| || ||||||| |||||||||||||||||||||||    
T  51206369 atttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 17568750 - 17568784
Alignment:
Q  59 gtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||||||| |||||||||||||||||||||||    
T  17568750 gtgtccggtgtccgtgtccgtatccgtgcttcata 17568784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 8789579 - 8789644
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| ||| ||||||||| ||| ||||||| ||||| |||| ||||||||||| ||| |||||    
T  8789579 tatgtgattttctcaaattataagccgtgtcggtgtgtctgtgttgtgtccggtgtccgtatccgt 8789644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 14209154 - 14209105
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| ||||| |||||||||| ||||||||||||||    
T  14209154 ttacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 23870579 - 23870632
Alignment:
Q  5 acactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| || ||| ||| ||||||||||||||||| |||||| ||||||||||||    
T  23870579 acactgaattatatgattttttcaaattattagcggtgtcgacgtgtccgtgtc 23870632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35222948 - 35222903
Alignment:
Q  34 ttagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    |||| |||||||||||||| |||||||||| ||||| |||||||||    
T  35222948 ttagttgtgtcggcgtgtctgtgtcgtgtctggtgtccgtgtccgt 35222903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 52369778 - 52369737
Alignment:
Q  55 tgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||| |||||| || ||||||||||||||||    
T  52369778 tgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatagat 52369737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 13845584 - 13845616
Alignment:
Q  64 cggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||| ||||||||||||||||||||||||||    
T  13845584 cggtgtccgtgtccgtatccgtgcttcatagat 13845616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 18426979 - 18426935
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||| ||||||||||  |||||||||||||||||||    
T  18426979 tatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtc 18426935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 26492242 - 26492278
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||||||||||| |||||||||||| |||||    
T  26492242 tttttcaaattattagctctgtcggcgtgtcagtgtc 26492278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 27505287 - 27505235
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    ||||||| || ||||||| ||||  |||||||||||||||||||| |||||||    
T  27505287 ttacacttaattatgtgatttttaaaaattattagctgtgtcggcttgtccgt 27505235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 28812555 - 28812507
Alignment:
Q  4 tacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    |||||| || ||||||| || ||||||||||||| ||||||||||||||    
T  28812555 tacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 22881634 - 22881725
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||    
T  22881634 ttacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtctatatccgtgcttcatag 22881725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 38078690 - 38078771
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  38078690 tatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttcgtgtccggtgtccgtgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 398783 - 398880
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||||||||||||||| ||||||||||||      |||||||||||||||||| || |||||||||||||||||||||    
T  398783 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcatag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 6415030 - 6415110
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| ||| |||||| ||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  6415030 tatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccggtgttcgtgtccgtatccgtgcttcata 6415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 3490431 - 3490498
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||  || |||||||||||||||||||    
T  3490431 tcaaattattagcagtgtcggcgtgtcagtgtcgtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 17831561 - 17831640
Alignment:
Q  15 atgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| ||| ||||||||||||| ||||||||||||| ||||||| ||||||||  ||||| |||||||||||||||||    
T  17831561 atgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcgtatccggtgtctgtgtctgtatccgtgcttcatag 17831640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 6612189 - 6612286
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||||||||||||||| |||| ||||||||||      |||||||||||||||||||||||||||||| |||||||||||    
T  6612189 ttacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccgtatctgtgcttcatag 6612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 10474997 - 10475086
Alignment:
Q  5 acactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||| || ||||||| ||| |||| |||||||| |||||||||||||  ||||||||||||||| ||||| | ||||||||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtcaatgtcgtgtccggtgtccgtgttcatatccgtgcttcatag 10475086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 14359540 - 14359623
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||    
T  14359540 ttacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgtccgtgtc-tgt------gtcgtgtccgtatccgtgcttcatag 14359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 48040477 - 48040568
Alignment:
Q  1 atttacactaaaatatgtgac-tttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgt 85  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||      |||||||||||||||||||||| ||| ||| |||||||    
T  48040477 atttacactaaaatatgtgacctttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatccgt 48040568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 22515905 - 22515960
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  22515905 ttacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtc 22515960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 42359467 - 42359565
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc------gtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||| || | ||||| |||||||||||||||| |||||| ||||||| |||||      |||| ||||||||||||||||||||||||||||||||    
T  42359467 ttacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccgtatccgtgcttcataga 42359565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 10577804 - 10577850
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  10577804 gtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 18190126 - 18190217
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||| | |||||||||||||||| |||||| |  | ||||||||||||||||||| | ||||||||||| ||||||||||||    
T  18190126 ttacactgaattatgtaattttttcaaattattaggtgtgtcag--tatccgtgtcgtgtccggtgtccatgtccgtatccatgcttcatagat 18190217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 1486727 - 1486823
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| || ||||||| ||||||||||||||||||||||| |||||      |||||||||| |||||| | ||||||||||||| |||||||||    
T  1486727 ttacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccgtatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 9103677 - 9103585
Alignment:
Q  7 actaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||| ||||||| ||||||||||||||| |||||||||||      |||||| ||| |||| ||||||||||||| |||||||||||||||    
T  9103677 actaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgtgtccatatccgtgcttcata 9103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 24577204 - 24577280
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| || ||||||| |||||||||||||||| |||||| ||||||||||||||||| | |||| ||| |||||    
T  24577204 ttacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtcgtgttcagtgtccgtatccgt 24577280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 35702626 - 35702682
Alignment:
Q  23 ttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||    
T  35702626 ttttcaaattattagctgtgtcggcatgtcagtgtcgtgtccggtgtccgtatccgt 35702682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 46348401 - 46348456
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||    
T  46348401 ttacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtc 46348456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 113340 - 113291
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||||    
T  113340 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtc 113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 21366039 - 21366135
Alignment:
Q  4 tacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| || ||||| | ||||| ||||||||||||||| |||||||||      |||||||||| |||||||| ||||||||| ||||||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcatag 21366135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12443478 - 12443530
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    ||||||| || ||||||| ||| ||||||||||||||||||||||||||||||    
T  12443478 ttacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgt 12443530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 24334743 - 24334810
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| |||||||||||||| |||||     |||||||||||| ||||||||||||| ||||||||||    
T  24334743 tttttcaaatgattagctgtgtcggtgtgtc-----cgtgtccggtgtccgtgtccgtatccatgcttcatag 24334810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 1262914 - 1262871
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  1262914 tatgtgattttctcaaattattagctgtgtcggcgtgtccgtgt 1262871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 18556474 - 18556529
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| |||| |||||||  |||||||||||||||||||||||||||||| |||||    
T  18556474 ttacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtc 18556529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 48450605 - 48450660
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||| | |||||||||||||||||||||| |||||||| |||||    
T  48450605 ttacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtc 48450660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 31694749 - 31694824
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccg----tgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||||||||||||||| ||||| ||| || |    ||||||||||||||| ||| |||||||||||||||||||    
T  31694749 tttttcaaattattagctatgtcgacgtatcagtgtctgtcgtgtccggtgtccgtatccgtatccgtgcttcata 31694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 38503361 - 38503264
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||| ||| ||| ||||||||||||| ||||||| ||||      ||||||| ||||| |||| ||||||||||||||||| ||||||    
T  38503361 ttacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcatag 38503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 40917779 - 40917714
Alignment:
Q  16 tgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgt 75  Q
    ||||| |||||||||||||||||||||||||||||      ||||||||||||||||||| |||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgtgt 40917714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 25934613 - 25934572
Alignment:
Q  53 cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  25934613 cgtgtcatgtccggtgtccgtgtccgtatccgtgcttcatag 25934572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 48548032 - 48548077
Alignment:
Q  49 tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||    
T  48548032 tgtccgtattgtgtccggtgtccgtgtccgtatccgtgcttcatag 48548077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 36878502 - 36878417
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||| ||||      |  ||| ||||||||||||||||||||||||    
T  36878502 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt------ctatgtccgtgtccgtatccgtgcttcatag 36878417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 41597539 - 41597587
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  41597539 gtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatagat 41597587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 6427483 - 6427440
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    |||||||||||||||| ||||||||| |||| ||||||||||||    
T  6427483 tttttcaaattattagttgtgtcggcatgtcagtgtcgtgtccg 6427440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 23531847 - 23531890
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttca 91  Q
    |||||||| |||||||| |||| |||||||||||||||||||||    
T  23531847 gtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 31672913 - 31672968
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || || |||| ||||||||||||||||||||||||| ||||| |||||    
T  31672913 ttacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 39953164 - 39953219
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||| | ||||||||||| |||||||||| ||||||||    
T  39953164 ttacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtc 39953219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 40173694 - 40173647
Alignment:
Q  47 cgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  40173694 cgtgtccgtgtcgtgtcccgtgtccgtgtccgagtccgtgcttcatag 40173647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 2896140 - 2896194
Alignment:
Q  4 tacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||| || ||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 2896194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 22907380 - 22907450
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||| | | |||| |||||| |||||||||| |||||  | |||||||||||||||| ||||||    
T  22907380 tcaaattattaacggcgtcgacgtgtctgtgtcgtgtctggtgtcggagtccgtatccgtgcttaatagat 22907450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 29144395 - 29144474
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccg----gtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||||||||||||||||| || ||||| |||||||    || |  |||||||||||| ||||||||||||    
T  29144395 tttttcaaattattagctgtgtcggcgtatcagtgtcagtgtccgtgtcgtatctgtgtccgtatccatgcttcatagat 29144474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 37598860 - 37598818
Alignment:
Q  16 tgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| |||||||||||||||| |||||||||||||| |||||    
T  37598860 tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 38076011 - 38076049
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtcc 64  Q
    ||||||||||||| |||||| ||||||||||||||||||    
T  38076011 tcaaattattagcagtgtcgtcgtgtccgtgtcgtgtcc 38076049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 40456031 - 40456073
Alignment:
Q  54 gtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||    
T  40456031 gtgtcgtgtccggtgtccgtgtccgtatccatgcttcacagat 40456073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 21378619 - 21378529
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | |||||||| |||||||||||||||| |||||| ||| ||||||  |||| | | || |||||||||||||||||    
T  21378619 ttacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtc--gtgtccatatctgtatccgtgcttcatag 21378529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 32461481 - 32461530
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||| |||| ||||||| |||||||||||||||| |||| |||||||||    
T  32461481 ttacattaaattatgtgattttttcaaattattagttgtgccggcgtgtc 32461530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 1705021 - 1705065
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| |||||||||||||||| |||||||| ||||| |||||    
T  1705021 tatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtc 1705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 94
Target Start/End: Complemental strand, 2218253 - 2218225
Alignment:
Q  66 gtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||||||||||    
T  2218253 gtgttcgtgtccgtatccgtgcttcatag 2218225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 5944303 - 5944267
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  5944303 tttttcaaattattagctgtggcggcgtgtcagtgtc 5944267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 17778579 - 17778530
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    ||||||| |||||||||||||||||||||||   || |||||||||||||||    
T  17778579 tatgtgattttttcaaattattagctgtgtc--tgtctccgtgtcgtgtccg 17778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 23653040 - 23652992
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    ||||||| || ||||||| |||||||||||||||||| |||||| ||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagctttgtcggtgtgt 23652992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 23738708 - 23738676
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcgg 46  Q
    ||||||| |||||||||||||||||||||||||    
T  23738708 tatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 26830582 - 26830542
Alignment:
Q  51 tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttca 91  Q
    ||||||||||||||| ||| ||||||| |||||||||||||    
T  26830582 tccgtgtcgtgtccgatgtccgtgtccatatccgtgcttca 26830542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 32434745 - 32434777
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcgg 46  Q
    |||||||||||||||||||||||| ||||||||    
T  32434745 tatgtgactttttcaaattattagttgtgtcgg 32434777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 94
Target Start/End: Complemental strand, 26769532 - 26769461
Alignment:
Q  23 ttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  26769532 ttttcaaattattagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 26769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 21374717 - 21374809
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||    
T  21374717 ttacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtccgtgtccgtatccgtgcttcatag 21374809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 38117188 - 38117253
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  38117188 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgt 38117253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 2438737 - 2438831
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc----gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||| ||||||||||||||||| ||    ||||||||||  ||||||||| |||||||||||||||||||||||||    
T  2438737 ttacactgaattatgtgattttttgaaattattagctgtgtcagcgtcagtgtccgtgttttgtccggtg-tcgtgtccgtatccgtgcttcatag 2438831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 20539692 - 20539783
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttc-gtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||| ||| |||||||||||||||||||||||| |||||| ||||| |||||  |||| | |||||||||||||||||||||||    
T  20539692 ttacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtc--gtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 30335458 - 30335357
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||      |||||||||||||||| |   | ||||||||||||||||||||||||||    
T  30335458 ttacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtccgtatccgtgcttcatagat 30335359  T
Q  97 at 98  Q
    ||    
T  30335358 at 30335357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 36096424 - 36096484
Alignment:
Q  34 ttagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||| | ||||||||||    
T  36096424 ttagctgtgtcggcgtgtccgtgtcgtgcctggtgtccgtgtccgtatacttgcttcatag 36096484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 44860361 - 44860273
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| || |||| || ||| ||||||||||||| ||||| |  ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  44860361 ttacactgaattatgcgattttctcaaattattagcggtgtcag--tgtccgtgtcgtgtctggtgtacgtatccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 37986820 - 37986758
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    ||||||| |||||| | | ||||||||||||||| ||||||||||||||| ||||||||||||    
T  37986820 ttacactcaaatatatcattttttcaaattattatctgtgtcggcgtgtcagtgtcgtgtccg 37986758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 23718067 - 23717977
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||| ||||| |||| ||||||   ||| |||||| |||||||||||||||||    
T  23718067 ttacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc--atgtccgtgtctgtatccgtgcttcatag 23717977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 24105739 - 24105649
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||||||| ||||||||||||| ||||||| ||||| |||| ||||||   ||| |||||| |||||||||||||||||    
T  24105739 ttacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc--atgtccgtgtctgtatccgtgcttcatag 24105649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 6940296 - 6940203
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcg-tgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||| ||||||| ||||||||||||||||||||||||| |||| ||||||  || || | |||||||||||||| |||||||||    
T  6940296 ttacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtatttgatgtccgtatccgtgtttcatagat 6940203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 21616803 - 21616708
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccg------tgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| || ||||||| ||| ||||||||||||| |||||||||||||||      |||||||||  ||||  |||||||||||||||||||||    
T  21616803 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 18631468 - 18631514
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||    
T  18631468 gtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcatag 18631514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 21624288 - 21624217
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttc-gtgtccgtatccgtgcttcata 93  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||  |||||| ||||||||||||| ||||||||    
T  21624288 tttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtc--gtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 29176511 - 29176577
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| || |||||||| |||||||||||||| ||||||| ||||||  ||||||||| ||||||    
T  29176511 ttacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtcgtgtgcggtgt 29176577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 1886915 - 1886985
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||| |||||| ||  ||||| |||||| ||| |||| |||||| |||||||||||||||||    
T  1886915 tttttcaaattattaactgtgttgg--tgtccatgtcgtatccagtgtccgtgtctgtatccgtgcttcatag 1886985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 18276562 - 18276466
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||| || || |||| ||| ||||||||||||| ||||||||      ||||| || ||||||||||||| |||||| ||||||||||||||||    
T  18276562 ttacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgtatccgtgcttcata 18276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 24894419 - 24894375
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||| ||||||||||||||||||||||||| |||||    
T  24894419 tatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtc 24894375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 27460048 - 27460012
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  27460048 tttttcaaattattagctgtgtcggcgtgtcagtgtc 27460012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 37559007 - 37558963
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| |||| |||||||||||||||||||||||||| |||||    
T  37559007 tatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtc 37558963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 18889609 - 18889679
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtg 74  Q
    ||||||| || ||||||| ||| |||| |||||||| | |||| ||||||||||||||||| ||||||||||    
T  18889609 ttacactgaattatgtgattttctcaatttattagcggcgtcg-cgtgtccgtgtcgtgtctggtgttcgtg 18889679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 24975341 - 24975431
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||| || |||  || ||| ||||||||||||| ||||||   |||| |||||||||||||||| |||| | ||||| |||||||||||    
T  24975341 atttacactgaattatacgattttctcaaattattagcggtgtcg---tgtcagtgtcgtgtccggtgtccgtgcctgtatctgtgcttcatag 24975431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 28677950 - 28677852
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||||||||||||||| ||||||||      ||||| ||||| ||||||| ||| ||||| |||||| |||||||||||    
T  28677950 ttacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatctgtgcttcatag 28677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 30404868 - 30404923
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| ||||||||||||||| | ||||||||||||| |||||    
T  30404868 ttacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtc 30404923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 12748725 - 12748659
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| || ||||| | ||| ||||||||||| |  |||| ||||||||||||||||||||||||    
T  12748725 ttacactgaactatgtcattttctcaaattattatccatgtcagcgtgtccgtgtcgtgtccggtgt 12748659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 14996261 - 14996332
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||||||| |||| |||| ||||||   |||  | |||||||||||||||||||||    
T  14996261 tttttcaaattattagctgtgtcggcttgtcagtgtccgtgtc--atgtctgcgtccgtatccgtgcttcatag 14996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21782836 - 21782890
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||| ||||    
T  21782836 ttacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 94
Target Start/End: Original strand, 27447082 - 27447116
Alignment:
Q  60 tgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||||||||||||||||||||    
T  27447082 tgtccggtgtccgtgtccgtatccgtgcttcatag 27447116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 28412340 - 28412294
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  28412340 gtgtccgtgtcgtgtctggtgtccgtgtccatattcgtgcttcatag 28412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 34785051 - 34785097
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||| || || |||||||||||| |||||||||||    
T  34785051 gtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcatag 34785097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 22550283 - 22550315
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||| |||||||||||||||||||    
T  22550283 tcaaattattagcagtgtcggcgtgtccgtgtc 22550315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 36409645 - 36409689
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc 47  Q
    |||||||||| ||||||| ||||||||||||| ||| ||||||||    
T  36409645 ttacactaaattatgtgattttttcaaattatcagcggtgtcggc 36409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 42832294 - 42832366
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtg 74  Q
    ||||||| |||||||| | ||| ||||||||||||| ||||||| ||||| | || |||||||||||| ||||    
T  42832294 ttacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtccggtgtccgtg 42832366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5813635 - 5813578
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5813635 atttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 5813578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 20785483 - 20785574
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||| |||| ||||||| ||  ||||||||||||| |||| ||| | |||||||||||| |||||| ||||||||||||||||||||||||    
T  20785483 ttacattaaattatgtgatttcctcaaattattagcggtgttggcatatccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcatag 20785574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 22652006 - 22651920
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||||||||||||||||||||||||      |||||||||||||||||||||  |||||||||||||| ||||||||    
T  22652006 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtatccgtacttcatag 22651920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 2572074 - 2572171
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||| |||||||||||||||| ||||||| ||||      |||||||||||||| |||| ||||||||||||| ||||||||||    
T  2572074 ttacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccgtatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 24858031 - 24857954
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtcc------gtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||||||||||| ||||||||||||||||      |||||||||||||||||||||||||||||||| |||||||    
T  24858031 tttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttcata 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 29510335 - 29510419
Alignment:
Q  16 tgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||| ||||||||||||||||||||||||||      |||||||||||||||||||||| | |||| |||||||||||||||||    
T  29510335 tgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagtatccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 22197760 - 22197857
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||||| |||||||||||||||||||||| |||      ||||| |||||||||||||||| ||||||   |||||||||||||||    
T  22197760 ttacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctagatccgtgcttcatag 22197857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 22596035 - 22595948
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||| | ||||| ||||||||||||||||||||||||| |||| |||||||      |||||||||||||||||||||||||    
T  22596035 ttacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgttgtgtccg------gtgtccgtatccgtgcttcatagat 22595948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 8343013 - 8342939
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    |||||||||| ||||||| |||||||||||||||||| |||||  ||||| |||||||||||| ||| |||||||||    
T  8343013 ttacactaaattatgtgattttttcaaattattagctatgtcg--gtgtcagtgtcgtgtccgatgtccgtgtccgt 8342939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13844614 - 13844674
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtc 63  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  13844614 ttacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtcgtgtc 13844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 3951586 - 3951646
Alignment:
Q  34 ttagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||  |||||||||||| || ||||| ||||||||||||||||||||||||||    
T  3951586 ttagctgtgtcgg--tgtccgtgtcgtatctggtgtccgtgtccgtatccgtgcttcatagat 3951646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 15816147 - 15816202
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||||||| |||||    
T  15816147 ttacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 16641994 - 16642082
Alignment:
Q  5 acactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||||| ||||||  ||| |||||||||||| |||||| |  |||| ||||||||||||| || ||| |||||||||||||||||||||    
T  16641994 acactaaattatgtgtatttctcaaattattagttgtgtcag--tgtctgtgtcgtgtccggcgtccgtatccgtatccgtgcttcataga 16642082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 24413629 - 24413676
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  24413629 gtgtccgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcataga 24413676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 43737882 - 43737929
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  43737882 gtgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcataga 43737929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 926857 - 926902
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||    
T  926857 gtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 4298904 - 4298994
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||| |||| ||||||| ||||||||||||||| ||||||||||||||  || || |||||  |||| ||||||| ||||||||||||||||    
T  4298904 ttacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtc--gtgtccgtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 4786356 - 4786445
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| || ||||||| ||| | |||||||||   ||||||||||||| ||||||||| ||||||  ||||| |||||||||||||||    
T  4786356 ttacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtcgtgttcggtgtcagtgtctgtatccgtgcttcat 4786445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 13436993 - 13437037
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||    
T  13436993 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 13437037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 25192376 - 25192420
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||    
T  25192376 tatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtc 25192420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 8343357 - 8343302
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||||||||||||||||| |||||| ||||| |||||    
T  8343357 ttacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtc 8343302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 20873110 - 20873055
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||| || |||||||||||| |||||    
T  20873110 ttacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtc 20873055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 39954297 - 39954352
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  39954297 ttacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 27101553 - 27101507
Alignment:
Q  6 cactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtc 27101507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 18407760 - 18407700
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtc 63  Q
    ||||||| || ||||||| |||||  ||||||||||||||||||| |||| ||||||||||    
T  18407760 ttacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtcgtgtc 18407700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 30271320 - 30271364
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||    
T  30271320 tatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 25566882 - 25566818
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| || ||||||| |||||||||||||||||||||||   ||||| ||||| ||||||||||    
T  25566882 ttacactgaattatgtgattttttcaaattattagctgtgtc--agtgtctgtgtcatgtccggtgt 25566818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 29447464 - 29447413
Alignment:
Q  43 tcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||| ||||||||||||  |||||| ||||||||||||||||    
T  29447464 tcggcgtgtctgtgccgtgtccggtgtctgtgtccatatccgtgcttcatag 29447413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 30077405 - 30077460
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || |||||||  |||||||||||||||||| || ||||||||||||||    
T  30077405 ttacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtc 30077460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 36450772 - 36450827
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || | ||||| |||||||||||||||| |||||||||||||| |||||    
T  36450772 ttacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 36450827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 18964161 - 18964115
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||| ||||| |||||||||||| ||||| |||||    
T  18964161 gtgtccgtgtcgtgtctggtgtccgtgtccgtatctgtgctacatag 18964115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 21465416 - 21465370
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||| ||| || |||||||| ||||||||    
T  21465416 gtgtccgtgtcgtgtccggtgtccgtatctgtatccgtccttcatag 21465370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 24196628 - 24196670
Alignment:
Q  16 tgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||| |||||||||||||||| |||||||||||||| |||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtc 24196670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 41831958 - 41832012
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| || ||||||| ||||||||||||||| |||||||||| |||| ||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggcatgtctgtgt 41832012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 24613561 - 24613513
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| ||||||||||||||||||||||||| |||||    
T  24613561 ttacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtc 24613513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 55
Target Start/End: Original strand, 31236606 - 31236647
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  31236606 tatgtgattttctcaaattattagcagtgtcggcgtgtccgt 31236647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 31557037 - 31556989
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||||| ||||||||||||||| |||||||||||||||    
T  31557037 ttacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtc 31556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4673462 - 4673498
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  4673462 tttttcaaattattatctgtgtcggcgtgtcagtgtc 4673498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 29447189 - 29447237
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||||| |||| | ||||||||||  ||||||||||||    
T  29447189 gtgtccgtgtcgtgtccagtgtccatgtccgtatctatgcttcatagat 29447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 41838152 - 41838196
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||| |||||||||||||||||| |||||| |||||    
T  41838152 tatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtc 41838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 9778530 - 9778452
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||||| ||||||||||||||||||||||||    
T  9778530 tatgtgattttttcaaattatcagctgtgtcag--tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 25481943 - 25481842
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||      ||||| ||| ||||||| ||| |||||| |||||||||||||||||||    
T  25481943 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccgtgtctgtatccgtgcttcatagat 25481844  T
Q  97 at 98  Q
    ||    
T  25481843 at 25481842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 11061098 - 11061189
Alignment:
Q  7 actaaaatatgtgactttttcaaattattagctgtgtcgg------cgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    |||||| ||||||| |||||||||||||||||||||||||       ||||||||||||| |||| ||| ||||||||||||||||||||||    
T  11061098 actaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 24105700 - 24105628
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||||||||||||||||||||||||||| |||| ||||||  |||| ||| |||||||||||||||||||||    
T  24105700 tttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgtccgtatccgtatccgtgcttcataga 24105628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 8234186 - 8234096
Alignment:
Q  4 tacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| || ||||| | |||||||||||||||| |||||||| ||||| |||||| ||||| ||||||||||| ||| ||| ||||||||    
T  8234186 tacactgaattatgttattttttcaaattattagttgtgtcggtgtgtctgtgtcgggtccgatgttcgtgtccatattcgtacttcatag 8234096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 25822677 - 25822603
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||||| | |||| ||||||||| |||||||||    
T  25822677 tttttcaaattattagttgtgtcggcgtgtctatgtcgtatccggtgtccatgtctgtatccgtgtttcatagat 25822603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 24339683 - 24339596
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccg 84  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||      ||||| ||||||||||||||| ||| ||||||||||    
T  24339683 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccgtatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 42720919 - 42720994
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgctt 89  Q
    ||||||| ||||||||||||||||| |||||  |||||| ||||| |||| | |||  ||||||||||||||||||    
T  42720919 tatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtcatgtctgatgtctgtgtccgtatccgtgctt 42720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 1433483 - 1433398
Alignment:
Q  15 atgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| ||| ||||||||||| | |||||||||||||      |||||||||| |||||| |||| |||||||||||||||||||    
T  1433483 atgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 18213103 - 18213149
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||    
T  18213103 gtgtccgtgtcgtgtctggtgttcgtgttcgtatctgtgcttcatag 18213149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 21141053 - 21141095
Alignment:
Q  50 gtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  21141053 gtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 18039009 - 18038944
Alignment:
Q  30 attattagctgtgtcggcgtgtccgtgtcgtgtccggtgttc-gtgtccgtatccgtgcttcatag 94  Q
    |||||||| ||||||||  |||| ||||||||||| |||| | |||||||||||||||||||||||    
T  18039009 attattagttgtgtcggaatgtcagtgtcgtgtcccgtgtcccgtgtccgtatccgtgcttcatag 18038944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 35861948 - 35861903
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||    
T  35861948 gtgtctgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 35861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43027485 - 43027578
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttc-gtgtccgtatccgtgcttcatag 94  Q
    |||||||||  | ||||||| ||||||||||||||||||| |||| |||||| ||||| |||||  |||| | ||||||| |||||||||||||||    
T  43027485 atttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtc--gtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 5409865 - 5409951
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||||||||||||||||| || ||      |||||| |||||| ||||||||  ||||| |||||||||||||||||    
T  5409865 tatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctgtatccgtgcttcatag 5409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 9408352 - 9408407
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||||||||||||||  |||||||| ||||| |||||    
T  9408352 ttacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 15680850 - 15680795
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||||  ||||||||||| |||||||||||| |||||    
T  15680850 ttacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtc 15680795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 17851414 - 17851375
Alignment:
Q  55 tgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  17851414 tgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 17851375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 23191937 - 23191882
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| |||||||||| ||| ||||||||||||| |||||||||| || |||||    
T  23191937 ttacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 32308161 - 32308106
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  32308161 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 1885557 - 1885519
Alignment:
Q  54 gtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    |||||||||||||||| |||||| |||||||||||||||    
T  1885557 gtgtcgtgtccggtgtccgtgtctgtatccgtgcttcat 1885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 5954254 - 5954208
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||||| |||| ||||| ||||||||||||| ||||    
T  5954254 gtgtccgtgtcgtgtcctgtgtccgtgttcgtatccgtgctttatag 5954208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9408410 - 9408456
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||| | |||||| |||||||||||||||| |||||||    
T  9408410 gtgtccgtgtcgtattcggtgtccgtgtccgtatccgtgtttcatag 9408456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 27945082 - 27944991
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttc-gtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||| ||||||||||||  ||||||||||||| |||| ||||||  |||| | |||||||||||||||||||||||    
T  27945082 ttacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc--gtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 30731078 - 30730981
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtcc------gtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||| |||||||||| || ||||||||||| |       |||||||||| ||||| |||||||||||| |||||||||||    
T  30731078 ttacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcatag 30730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 33384600 - 33384690
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||||||| |||  || ||| ||| ||||||| | ||||||| |||| |||||||||||| ||||  || | |||||||||||||||||    
T  33384600 ttacactaaattataggattttctcagattattaacggtgtcggtgtgttcgtgtcgtgtccagtgtctgtattcgtatccgtgcttcata 33384690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 45056930 - 45056980
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtcc 64  Q
    ||||||| ||| ||||||||||||| |||| || |||||||||||||||||    
T  45056930 tatgtgattttctcaaattattagcagtgttggagtgtccgtgtcgtgtcc 45056980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 1656717 - 1656627
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||| || ||||||| ||||| |||   |||| ||||||||  ||||||||||||||||| | | ||||||| ||||||| |||||||||    
T  1656717 ttacactgaattatgtgattttttaaaaaatttagttgtgtcgg--tgtccgtgtcgtgtccgatatccgtgtccatatccgtacttcataga 1656627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 18215215 - 18215252
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  18215215 tatgtgattttttcaaattattagctgcgtcggcgtgt 18215252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 19992042 - 19992001
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtc 44  Q
    ||||||| |||||||||| ||| |||||||||||||||||||    
T  19992042 ttacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 35861994 - 35861957
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  35861994 tatgtgattttttcaaattattagttgtgtcggcgtgt 35861957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 40287383 - 40287428
Alignment:
Q  12 aatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||| ||| |||||||||||||| | |||||||||||||||||||    
T  40287383 aatatatgattttttcaaattattcgttgtgtcggcgtgtccgtgt 40287428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 13300451 - 13300362
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||| ||| |||||||||||||||| | |||| |  | |||||||||||| |||||| ||||| | ||||| ||||||||||    
T  13300451 ttacactgaattatatgattttttcaaattattagttatgtcag--tatccgtgtcgtgttcggtgtccgtgttcatatccctgcttcatag 13300362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 20545266 - 20545306
Alignment:
Q  15 atgtgactttttcaaattattagctgtgtcggcgtgtccgt 55  Q
    |||||| ||||||||||||||||| |||| |||||||||||    
T  20545266 atgtgattttttcaaattattagcggtgttggcgtgtccgt 20545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 21560517 - 21560477
Alignment:
Q  25 ttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccg 65  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  21560517 ttcaaattattagctgtatcggcgtgtcagtgtcgtatccg 21560477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 21864828 - 21864792
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||| | |||||||||||    
T  21864828 tttttcaaattattagctgtgtccgtgtgtccgtgtc 21864792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 29787387 - 29787435
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||    
T  29787387 ttacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36642778 - 36642876
Alignment:
Q  1 atttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||      ||||||||||||||||||||| || ||||||||||| ||||||||||    
T  36642778 atttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtg-tcttgtccgtatccatgcttcatag 36642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 15382499 - 15382421
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||||||||||||      ||||||||||||||||| ||||||||||||||||||||||||    
T  15382499 tttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 31084353 - 31084298
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31084353 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgt 31084298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 21522791 - 21522694
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||||| |||||||||||||||||||||||||      ||||||||||||||||  ||||||||||||||||||||||||    
T  21522791 ttacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 21533357 - 21533260
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||||| |||||||||||||||||||||||||      ||||||||||||||||  ||||||||||||||||||||||||    
T  21533357 ttacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccgtatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 13287417 - 13287509
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgctt 89  Q
    ||||||| || ||||||| ||||||||||||||| |||||||| |||||      |||||||||||||||||| |||||||||||||||||||    
T  13287417 ttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 14674310 - 14674255
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  14674310 ttacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 14674255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 22013455 - 22013363
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttc-gtgtccgtatccgtgcttcataga 95  Q
    |||||||||| ||||| | |||| |||||||||||||||||||||||||| |||| ||||||  |||| | ||||||||||||||||||||||||    
T  22013455 ttacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtc--gtgtccggtgtccgtatccgtgcttcataga 22013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 2436952 - 2436887
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||| ||| |||||    
T  2436952 tatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtcgtgtccggtgtccgtatccgt 2436887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 21191074 - 21191158
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtat 81  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||      ||||||||||||||||||||||  ||||||||||    
T  21191074 ttacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagtgtccgtat 21191158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 11685980 - 11685898
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    |||||||||| |||| |||||| ||||||||||||| |||||||| |||| ||||||||||       ||||||||||||||||||||||    
T  11685980 ttacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtcgtgtc-------cgtgtccgtatccgtgcttcat 11685898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 19579739 - 19579645
Alignment:
Q  6 cactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||      |||||||||| || ||||||||  |||| ||||||||||||||||||    
T  19579739 cactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcatag 19579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 23016060 - 23016107
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  23016060 gtgtccgtgtcgtgtccggagtccgtgtccgtatccgtgcttcataga 23016107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 20683370 - 20683324
Alignment:
Q  49 tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||    
T  20683370 tgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgctttataga 20683324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 42893390 - 42893346
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  42893390 tatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtc 42893346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 39698582 - 39698527
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| ||||||||||||||||||||||| ||||||| |||||    
T  39698582 ttacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtc 39698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6247663 - 6247609
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt 57  Q
    ||||||| || ||||||| |||||||||||||||| |||||||||||||| ||||    
T  6247663 ttacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6401488 - 6401442
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||| ||||||||| |||||| |||||||||||||||||    
T  6401488 gtgtccgtgtcgcgtccggtgtccgtgtctgtatccgtgcttcatag 6401442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Original strand, 6471907 - 6471998
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||| |  |||||||||| |||||||| |  ||||| ||| |||||||||||||||    
T  6471907 ttacactgaattatgtgattttctcaaattattagccgtgtcag--tgtccgtgtcatgtccggtttctgtgtctgtaaccgtgcttcatagat 6471998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 19552562 - 19552616
Alignment:
Q  4 tacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||| || ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 19552616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 21814272 - 21814226
Alignment:
Q  33 attagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||    
T  21814272 attagctgtgtcggcgtgtccatgtcgtttccggtgtccgtgtccgt 21814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 10298599 - 10298562
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10298599 tatgtgactttttcaaattattagttgtgtcggcgtgt 10298562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 33178066 - 33178017
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    |||||||||| ||||||| ||||| |||||||||| ||||||||||||||    
T  33178066 ttacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtc 33178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 34276846 - 34276801
Alignment:
Q  49 tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||    
T  34276846 tgtctgtgtcgtgtccggtatccgtgtccgtatccgtgcttcatag 34276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 41995501 - 41995417
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc------gtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| |||||| ||||||||| |||||||||||||| |||||      || ||| |||| ||||||||||||||||||||||    
T  41995501 tatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 32766984 - 32767049
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||||||||| |||||||  |||||||||||||||| ||||  ||||  ||||||||||||||||    
T  32766984 tcaaattattagcggtgtcgg--tgtccgtgtcgtgtccagtgtctgtgtttgtatccgtgcttcata 32767049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 21351923 - 21351978
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || |||||||||||||| ||||||||| |||||||| ||||| |||||    
T  21351923 ttacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtc 21351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 21576763 - 21576830
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtg-tcgtgtccggtgt 69  Q
    ||||||| || ||||||| |||||||||||||||||||||| ||||| || ||| |||||||| ||||    
T  21576763 ttacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtccagtgt 21576830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 27144504 - 27144449
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| ||  ||||||||||||| ||||||||||||| |||||    
T  27144504 ttacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 30135335 - 30135263
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||||||||||||| |||||||||||||| || || |||||  |||| |||||||||||  ||||||||||||    
T  30135335 tttttcaaattattagttgtgtcggcgtgtcggtatctgtgtc--gtgtccgtgtccgtatatgtgcttcataga 30135263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 42469262 - 42469180
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtg------tccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    |||||||||||||||| | ||| ||||||||||| | |||||||||||      |||||||||||| |||||| |||||||||    
T  42469262 ttacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgt 42469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6326366 - 6326412
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||| | ||||||| ||||| ||||||||||    
T  6326366 gtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcatag 6326412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6770533 - 6770487
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||| ||| |||||| ||| ||||||||||||||||||||    
T  6770533 gtgtccgtgtcatgttcggtgtccgtatccgtatccgtgcttcatag 6770487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 16941973 - 16942018
Alignment:
Q  44 cggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttc 90  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||    
T  16941973 cggcgtgtccgtgtcgtgtcc-gtgtccgtgtctgtatccgtgcttc 16942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 41633776 - 41633727
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| || ||||| | ||||||||||||||||||||||||| |||||    
T  41633776 ttacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtc 41633727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 7677735 - 7677703
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcgg 46  Q
    ||||||| |||||||||||||||||||||||||    
T  7677735 tatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 28862302 - 28862262
Alignment:
Q  53 cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    ||||||||||||| ||| ||||||| |||||||||||||||    
T  28862302 cgtgtcgtgtccgatgtccgtgtccatatccgtgcttcata 28862262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 42640548 - 42640476
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||| |||||||||||||||||||||| ||||||  ||| ||||||||||||||||||||||||    
T  42640548 tttttcaaattatcagctgtgtcggcgtgtccgtgttgtgtccaatgtccgtgtccgtatccgtgcttcatag 42640476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 23293015 - 23293101
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| |||||||||||||||||||||||||||||||      ||||||||||||||||| |||||||||||| |||||||||||    
T  23293015 tatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 15029806 - 15029715
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || |||||||  |||||||||||||||| ||||| ||||||| |||||||||||||| | | ||||||||||| ||||||||||    
T  15029806 ttacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtcgtgtccggtctccatgtccgtatccctgcttcatag 15029715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 4157187 - 4157101
Alignment:
Q  6 cactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    ||||||| ||||||| |||||||||||||||| |||||| |  |||| |||||||||| ||||| |||||||||||||||||||||||||    
T  4157187 cactaaattatgtga-tttttcaaattattagttgtgtcag--tgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcataga 4157101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 50280920 - 50280863
Alignment:
Q  5 acactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgt 62  Q
    ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50280920 acacttaattatgtgaatttttcaaattattagctgtgtcggcgtgtccgtgtcgtgt 50280863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 3947784 - 3947874
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || |||| || |||||||||||||||||||||||||| |||||||||| |||  ||||| |||||||||||| | |||||||||    
T  3947784 ttacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtc-tgtgtggtgtccgtgtccgtatctgagcttcatag 3947874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 7377390 - 7377317
Alignment:
Q  23 ttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||||| ||| |||||| | || ||||||||||    
T  7377390 ttttcaaattattagttgtgtaggcgtgtccgtgtcgtgtctggtgtccgtctccgtacctgtacttcatagat 7377317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 37203305 - 37203222
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||| | |||||||||||||||||        |||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  37203305 ttacactaaattatgtcattttttcaaattattagc--------cgtgtctgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 37203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 7251664 - 7251721
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgt 79  Q
    |||||||||||||||||||||||||||| || |||| ||||||||||| ||| |||||    
T  7251664 tttttcaaattattagctgtgtcggcgtttctgtgttgtgtccggtgtccgtatccgt 7251721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 35158003 - 35158091
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc------gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgt 85  Q
    |||||||||| ||||||| |||| ||||||||||| || ||||||      |||||||||| ||||||||||| |||||||||||||||    
T  35158003 ttacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgtatccgt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 20633507 - 20633429
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc------gtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||||||||| |||||| |||||| |||||      ||||| ||||| ||||||||||||||||||||||||    
T  20633507 tttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 28470411 - 28470339
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    |||||||||||||||| |||||| |  |||| ||||| | |||||||| ||| ||||||||||||||||||||||    
T  28470411 tttttcaaattattagttgtgtcag--tgtctgtgtcatatccggtgtccgtatccgtatccgtgcttcatagat 28470339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 44081646 - 44081693
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  44081646 gtgtccttgtcgtgtccgatgttcgtgtccgtatcggtgcttcataga 44081693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 47191011 - 47191099
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||||||| ||||| | |||  |||||||||| |  ||||||  |||||||||||| ||||||||||||||| |||||| |||||||||    
T  47191011 ttacactaaattatgtcattttcgcaaattattatccatgtcgg--tgtccgtgtcgtatccggtgttcgtgtctgtatccatgcttcata 47191099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 2361993 - 2362092
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc--------gtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||| ||||| | ||||||||||||||||||||||||| |||||  ||||        ||||| | ||||||||||||||||||| ||||||||    
T  2361993 ttacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgtgtctgatgttcgtgtccgtatccgtacttcatag 2362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 12895292 - 12895389
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| ||| ||||||| |||||||||||||||  ||||||||||||||      |||||||| |||||||| ||| |||||||| ||| |||||||    
T  12895292 ttacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgtatccgtatctgtgtttcatag 12895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 24343548 - 24343451
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||| | ||| ||||||||||| | |||||||||||||      ||||||||||||||||| |||||| || ||||||||||||||    
T  24343548 ttacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgcttcatag 24343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 28720898 - 28720827
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtg-tcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||||||||||| |||| ||| |||||||  |||| |||||| |||| ||||||||||||    
T  28720898 tttttcaaattattagctgtgtcggcatgtcagtgttcgtgtc--gtgtccgtgtctgtatacgtgcttcatag 28720827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 12628617 - 12628694
Alignment:
Q  17 gtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||| ||||||||||||||| |||||||||| |||| ||||| |||||   ||| ||| |||||||||||||||||||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtc--atgtccgtatccgtatccgtgcttcataga 12628694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 27706195 - 27706286
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc------gtgtccggtgttcgtgtccgtatccgtgct 88  Q
    |||||||||| ||||||| ||||| |||||||||  ||||||| |||||| |||||      ||||| ||||| ||||||||||||||||||    
T  27706195 ttacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30298968 - 30298932
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30298968 tttttcaaattattagctgtgtcggcgtgtcagtgtc 30298932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30327836 - 30327800
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||||||||||||||||||||||| |||||    
T  30327836 tttttcaaattattagctgtgtcggcgtgtcagtgtc 30327800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 15835676 - 15835723
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||||||||||| | ||||||| ||||| ||||||||||||||||    
T  15835676 tttttcaaattattaacagtgtcggtgtgtctgtgtcgtgtccggtgt 15835723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 19482698 - 19482612
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcg------tgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||  ||||||||||||||| ||||||||||      |||| |||||||||| |||||  |||| ||||||||||||||||||    
T  19482698 tatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtgcttcatag 19482612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 21873400 - 21873480
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| ||| |||||||||| || ||||| |  ||||||||||||||||  ||| |||||| |||||||||||| ||||||    
T  21873400 tatgtgattttatcaaattatttgcagtgtcag--tgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaatagat 21873480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 21929261 - 21929341
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| ||| |||||||||| || ||||| |  ||||||||||||||||  ||| |||||| |||||||||||| ||||||    
T  21929261 tatgtgattttatcaaattatttgcagtgtcag--tgtccgtgtcgtgtccaatgtccgtgtctgtatccgtgcttaatagat 21929341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 21945544 - 21945489
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||| | |||||||||||||||||||||||||| |||| |||||    
T  21945544 ttacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 52476360 - 52476313
Alignment:
Q  47 cgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||||||||||||| |||| ||||||||  ||||||||||||||    
T  52476360 cgtgtccgtgtcgtgtcccgtgtccgtgtccgagtccgtgcttcatag 52476313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 5111635 - 5111589
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| |||||| |||||||| |||| |||||||||||||||||||    
T  5111635 gtgtccatgtcgtatccggtgtccgtgcccgtatccgtgcttcatag 5111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 12895145 - 12895183
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtc 52  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  12895145 tatgtgattttttcaaattattagctgtttcggcgtgtc 12895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 30982896 - 30982988
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggc---gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| |||||||||| ||| |||||| |||||| ||| ||     ||||||||||||| |||||||| | ||| ||||||||||||||||    
T  30982896 ttacactgaaatatgtgattttctcaaatcattagcggtggcgtgtctgtgtccgtgtcgtatccggtgtccatgttcgtatccgtgcttcat 30982988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 97
Target Start/End: Original strand, 46084046 - 46084084
Alignment:
Q  59 gtgtccggtgttcgtgtccgtatccgtgcttcatagata 97  Q
    ||||||||||| ||||||||||||| |||||||||||||    
T  46084046 gtgtccggtgtccgtgtccgtatccatgcttcatagata 46084084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 52
Target Start/End: Complemental strand, 49431047 - 49431017
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtc 52  Q
    |||||||||||||||||||||||||||||||    
T  49431047 tttttcaaattattagctgtgtcggcgtgtc 49431017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 56049895 - 56049845
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtc 76  Q
    ||||||||||| | ||||||  |||||||||||||||||||||| ||||||    
T  56049895 tcaaattattatcggtgtcgatgtgtccgtgtcgtgtccggtgtccgtgtc 56049845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 11110711 - 11110787
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcataga 95  Q
    |||||||  |||||||||||||   ||||||||||||||      ||||||||||| |||||| ||||||||||||||||||    
T  11110711 tatgtgatattttcaaattattccttgtgtcggcgtgtc-----tgtgtccggtgtccgtgtcggtatccgtgcttcataga 11110787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 11651163 - 11651207
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||||| |||||||||||||||||| |||||| |||||    
T  11651163 tatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtc 11651207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 14126129 - 14126177
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    ||||||| || ||||||||||| ||||||||||| | ||||||||||||    
T  14126129 ttacactgaattatgtgactttatcaaattattaacagtgtcggcgtgt 14126177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22234928 - 22234964
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  22234928 tttttcaaatttttagcggtgtcggcgtgtccgtgtc 22234964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 36635314 - 36635266
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| ||||||||||||||  |||||| ||||| ||||||||||||    
T  36635314 gtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcatagat 36635266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 8839 - 8742
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||  || ||| |||||||||||||||||||||||||||||||      ||||||||||||||||| ||||||||||||| ||||||||||    
T  8839 ttacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 46723 - 46626
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||||||||||||| |||||||||||||||      ||||||||||||| ||| ||||||||||||||||||||||||    
T  46723 ttacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatag 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 8032 - 7961
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 93  Q
    |||||||||||||||| |||||||||||||| || ||||||||| ||||||||| ||||||| | |||||||    
T  8032 tttttcaaattattagttgtgtcggcgtgtctgtatcgtgtccgatgttcgtgttcgtatccatacttcata 7961  T

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Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 96
Target Start/End: Complemental strand, 71745 - 71677
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||    
T  71745 tttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccg------atgtccgtatccgtgcttcatagat 71677  T

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Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 130523 - 130426
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc------cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| ||||||||| ||||| |||||||||| ||||      ||||||||||||||||| ||||||||||||| ||||||||||    
T  130523 ttacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccatgcttcatag 130426  T

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Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 480 - 575
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgt------gtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||| || | ||||| ||||||||||||||||| ||||||||||      ||||||| ||||| |||||| ||||||||||||||||||||||    
T  480 ttacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgtgtccgtatccgtgcttcat 575  T

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Target: scaffold0171 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 96
Target Start/End: Complemental strand, 23461 - 23369
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc-gtgtccggtgttcgtgtccgtatccgtgcttcatagat 96  Q
    ||||||| || ||||||| |||||  | |||||| ||||||||||||||| ||||| |||||  |||| ||||||||||||||||||||||||||    
T  23461 ttacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtc--gtgtccgtgtccgtatccgtgcttcatagat 23369  T

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Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 51852 - 51797
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||    
T  51852 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 51797  T

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Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 33381 - 33445
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtcgtgtccggtgt 69  Q
    ||||||| || ||||| | |||||||||||||||||||||||||||||||  |||||||||||||||    
T  33381 ttacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc--tgtcgtgtccggtgt 33445  T

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Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 79
Target Start/End: Complemental strand, 53221 - 53143
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtc--cgtgtcgtgtccggtgttcgtgtccgt 79  Q
    ||||||| || ||||||| ||| |||||||||| || || ||||||||||  |||||||||||||||||||||||||||    
T  53221 ttacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcagcgtgtcgtgtccggtgttcgtgtccgt 53143  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 241635 - 241580
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||||||| |||||    
T  241635 ttacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtc 241580  T

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Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 20213 - 20122
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgt-cgtgtccggtgttc-gtgtccgtatccgtgcttcatag 94  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||||||  ||| ||||||  |||| | ||||||||||| |||||||||||    
T  20213 ttacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtc--gtgtccggtgtccgtatctgtgcttcatag 20122  T

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Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 9888 - 9842
Alignment:
Q  48 gtgtccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9888 gtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 9842  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 14571 - 14520
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccg 54  Q
    ||||||| || ||||||| |||||||||||||||| ||||||||||||||||    
T  14571 ttacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtccg 14520  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 7329 - 7380
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccg 54  Q
    |||||||||| ||||||| |||| ||||||||||| ||||||||||||||||    
T  7329 ttacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtccg 7380  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 17767 - 17815
Alignment:
Q  3 ttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgt 51  Q
    |||||||||| ||||||| |||||||||||||||| |||||| ||||||    
T  17767 ttacactaaattatgtgattttttcaaattattagttgtgtcagcgtgt 17815  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 225309 - 225383
Alignment:
Q  26 tcaaattattagctgtgtcggcgtgt------ccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||| ||||||||||||||      |||||||||||||||||| |||||| || |||||| |||||||    
T  225309 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgtttcatag 225383  T

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Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 3303 - 3262
Alignment:
Q  51 tccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcat 92  Q
    ||||||||||||||||||| ||||||  ||||||||||||||    
T  3303 tccgtgtcgtgtccggtgtccgtgtctatatccgtgcttcat 3262  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 3928 - 3969
Alignment:
Q  53 cgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||    
T  3928 cgtgtcgtgtctggtgtccgtgtccatatccgtgcttcatag 3969  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 13430 - 13386
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||| |||||||||||| |||||||||||||| |||||    
T  13430 tatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtc 13386  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 21897 - 21941
Alignment:
Q  14 tatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    ||||||| ||| |||||||||||| |||||||||||||| |||||    
T  21897 tatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtc 21941  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 63741 - 63709
Alignment:
Q  62 tccggtgttcgtgtccgtatccgtgcttcatag 94  Q
    |||||||| ||||||||||||||||||||||||    
T  63741 tccggtgtccgtgtccgtatccgtgcttcatag 63709  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 178856 - 178892
Alignment:
Q  22 tttttcaaattattagctgtgtcggcgtgtccgtgtc 58  Q
    |||||||||||||||| |||||||||||||| |||||    
T  178856 tttttcaaattattagttgtgtcggcgtgtcagtgtc 178892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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