View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6304_high_4 (Length: 503)

Name: NF6304_high_4
Description: NF6304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6304_high_4
NF6304_high_4
[»] chr1 (49 HSPs)
chr1 (173-495)||(9830452-9830775)
chr1 (291-355)||(51589819-51589883)
chr1 (291-398)||(17452686-17452789)
chr1 (291-364)||(4112547-4112620)
chr1 (145-206)||(10913933-10913994)
chr1 (291-401)||(17452835-17452941)
chr1 (145-206)||(33619059-33619120)
chr1 (291-401)||(35772235-35772341)
chr1 (145-206)||(37172411-37172472)
chr1 (291-401)||(42586446-42586551)
chr1 (145-206)||(43191819-43191880)
chr1 (145-206)||(50096292-50096353)
chr1 (291-347)||(25145492-25145548)
chr1 (291-400)||(40079124-40079229)
chr1 (304-397)||(52961557-52961646)
chr1 (281-401)||(2859389-2859505)
chr1 (291-407)||(4113013-4113124)
chr1 (294-402)||(31181523-31181627)
chr1 (145-206)||(33716-33777)
chr1 (145-206)||(14602169-14602230)
chr1 (145-206)||(20061961-20062022)
chr1 (145-206)||(26244708-26244769)
chr1 (291-344)||(27413371-27413424)
chr1 (281-346)||(27413604-27413669)
chr1 (145-206)||(50624925-50624986)
chr1 (294-355)||(51589005-51589066)
chr1 (291-401)||(38733353-38733459)
chr1 (291-355)||(51589239-51589303)
chr1 (305-348)||(5953497-5953540)
chr1 (375-406)||(17468310-17468341)
chr1 (372-406)||(21626423-21626457)
chr1 (294-401)||(25137313-25137416)
chr1 (148-206)||(28031809-28031867)
chr1 (302-355)||(3170014-3170067)
chr1 (294-355)||(5953206-5953267)
chr1 (110-143)||(9830786-9830819)
chr1 (145-206)||(39288317-39288378)
chr1 (291-344)||(40316057-40316110)
chr1 (145-206)||(42154909-42154970)
chr1 (145-206)||(47829121-47829182)
chr1 (295-343)||(2859638-2859686)
chr1 (291-347)||(3169787-3169843)
chr1 (291-355)||(9499259-9499322)
chr1 (150-206)||(29584557-29584613)
chr1 (291-347)||(31432237-31432293)
chr1 (291-331)||(31496378-31496418)
chr1 (291-347)||(33156754-33156810)
chr1 (291-347)||(35772050-35772106)
chr1 (291-347)||(52907405-52907461)
[»] chr7 (47 HSPs)
chr7 (291-406)||(11211686-11211796)
chr7 (145-206)||(19476553-19476614)
chr7 (295-346)||(42985134-42985185)
chr7 (295-345)||(26028972-26029022)
chr7 (291-401)||(36277233-36277339)
chr7 (145-206)||(42517026-42517087)
chr7 (291-401)||(48661562-48661668)
chr7 (295-347)||(23796034-23796086)
chr7 (147-206)||(34487303-34487362)
chr7 (294-401)||(1596799-1596902)
chr7 (282-364)||(22574840-22574921)
chr7 (148-206)||(23177209-23177267)
chr7 (145-206)||(24519-24580)
chr7 (295-401)||(3038095-3038197)
chr7 (291-401)||(17202150-17202256)
chr7 (145-206)||(19157852-19157913)
chr7 (145-206)||(20757251-20757312)
chr7 (294-401)||(21054963-21055066)
chr7 (291-364)||(25620140-25620213)
chr7 (291-401)||(29469576-29469682)
chr7 (145-206)||(31579594-31579655)
chr7 (145-206)||(40729222-40729283)
chr7 (294-355)||(40746278-40746339)
chr7 (291-364)||(48243068-48243141)
chr7 (146-206)||(22364816-22364875)
chr7 (294-342)||(24432148-24432196)
chr7 (291-347)||(34027414-34027470)
chr7 (291-346)||(6782883-6782938)
chr7 (291-346)||(36206070-36206125)
chr7 (291-345)||(4506955-4507009)
chr7 (294-401)||(21861265-21861368)
chr7 (294-364)||(21861533-21861603)
chr7 (294-401)||(47710414-47710517)
chr7 (294-401)||(47722070-47722173)
chr7 (294-347)||(21822064-21822117)
chr7 (145-206)||(22954503-22954564)
chr7 (291-401)||(29469811-29469917)
chr7 (291-401)||(33996318-33996424)
chr7 (145-206)||(34595482-34595543)
chr7 (294-343)||(40991754-40991803)
chr7 (295-364)||(48243448-48243517)
chr7 (291-347)||(2544454-2544510)
chr7 (291-347)||(4886350-4886406)
chr7 (291-355)||(10903098-10903162)
chr7 (303-343)||(21311415-21311455)
chr7 (291-347)||(31257038-31257094)
chr7 (304-364)||(31485679-31485739)
[»] chr6 (39 HSPs)
chr6 (282-401)||(9705225-9705340)
chr6 (291-401)||(12329951-12330057)
chr6 (291-347)||(21690743-21690799)
chr6 (282-401)||(6054374-6054489)
chr6 (145-206)||(3484943-3485004)
chr6 (291-401)||(4868584-4868690)
chr6 (145-206)||(5404729-5404790)
chr6 (291-401)||(6542950-6543056)
chr6 (291-401)||(12330298-12330403)
chr6 (291-401)||(25065101-25065207)
chr6 (148-206)||(28853647-28853705)
chr6 (294-401)||(33494510-33494613)
chr6 (291-364)||(4868820-4868893)
chr6 (145-206)||(8926346-8926407)
chr6 (291-364)||(12330186-12330259)
chr6 (149-206)||(17238197-17238254)
chr6 (145-206)||(19661512-19661573)
chr6 (145-206)||(29819545-29819606)
chr6 (291-406)||(30256779-30256889)
chr6 (145-206)||(30609029-30609090)
chr6 (150-206)||(4601117-4601173)
chr6 (292-401)||(6237715-6237815)
chr6 (291-347)||(8026410-8026466)
chr6 (291-347)||(8026625-8026681)
chr6 (134-206)||(16525341-16525413)
chr6 (302-364)||(4906810-4906872)
chr6 (294-401)||(13353172-13353275)
chr6 (148-206)||(31717337-31717395)
chr6 (294-401)||(33796297-33796400)
chr6 (145-206)||(5923986-5924047)
chr6 (291-347)||(7915872-7915926)
chr6 (145-206)||(8936603-8936664)
chr6 (298-347)||(20830771-20830820)
chr6 (145-202)||(33783564-33783621)
chr6 (304-364)||(5648692-5648752)
chr6 (291-347)||(11721926-11721982)
chr6 (304-401)||(17147680-17147773)
chr6 (291-355)||(20373584-20373647)
chr6 (291-347)||(30256599-30256655)
[»] chr3 (41 HSPs)
chr3 (291-401)||(54368487-54368593)
chr3 (291-406)||(45138978-45139089)
chr3 (145-206)||(16056507-16056568)
chr3 (134-206)||(46962745-46962817)
chr3 (291-401)||(20327621-20327727)
chr3 (145-206)||(26582775-26582836)
chr3 (145-206)||(27934610-27934671)
chr3 (145-206)||(32315539-32315600)
chr3 (291-401)||(35038201-35038307)
chr3 (145-206)||(52835704-52835765)
chr3 (282-406)||(45138800-45138920)
chr3 (148-206)||(33162483-33162541)
chr3 (294-401)||(38791460-38791563)
chr3 (145-206)||(14545999-14546060)
chr3 (291-401)||(16926956-16927062)
chr3 (291-401)||(20303071-20303177)
chr3 (294-400)||(22729072-22729174)
chr3 (145-206)||(29838457-29838518)
chr3 (145-206)||(49500002-49500063)
chr3 (145-206)||(50645631-50645692)
chr3 (291-347)||(1723083-1723139)
chr3 (291-347)||(11589806-11589862)
chr3 (291-347)||(31317249-31317305)
chr3 (292-401)||(35038436-35038541)
chr3 (145-205)||(49121875-49121935)
chr3 (291-346)||(24866219-24866274)
chr3 (304-347)||(45828040-45828083)
chr3 (147-206)||(55092368-55092427)
chr3 (281-347)||(34610582-34610648)
chr3 (294-343)||(13741111-13741160)
chr3 (291-401)||(16239562-16239668)
chr3 (295-401)||(20327860-20327962)
chr3 (145-206)||(38807697-38807758)
chr3 (149-206)||(42093558-42093615)
chr3 (291-364)||(54567896-54567969)
chr3 (291-347)||(4155345-4155401)
chr3 (291-343)||(6487340-6487392)
chr3 (134-206)||(7029533-7029605)
chr3 (291-351)||(33205482-33205542)
chr3 (291-347)||(50052546-50052602)
chr3 (302-407)||(50930667-50930768)
[»] chr5 (47 HSPs)
chr5 (134-206)||(7133273-7133345)
chr5 (294-401)||(24346511-24346614)
chr5 (291-407)||(1564574-1564686)
chr5 (281-401)||(41666754-41666870)
chr5 (295-406)||(15438843-15438950)
chr5 (294-401)||(24269881-24269983)
chr5 (291-406)||(28510057-28510168)
chr5 (145-206)||(6497351-6497412)
chr5 (145-206)||(10461508-10461569)
chr5 (145-206)||(22394287-22394348)
chr5 (291-401)||(24346744-24346850)
chr5 (291-401)||(41667000-41667106)
chr5 (291-355)||(27133000-27133064)
chr5 (291-334)||(9187320-9187363)
chr5 (294-401)||(17352445-17352547)
chr5 (145-206)||(14868832-14868893)
chr5 (145-206)||(18786144-18786205)
chr5 (145-206)||(24491006-24491067)
chr5 (291-364)||(24531603-24531676)
chr5 (145-206)||(41137300-41137361)
chr5 (294-406)||(7369690-7369798)
chr5 (295-355)||(17015890-17015950)
chr5 (291-347)||(19522341-19522397)
chr5 (291-347)||(25258101-25258157)
chr5 (291-347)||(25258308-25258364)
chr5 (291-347)||(25321891-25321947)
chr5 (291-347)||(25322098-25322154)
chr5 (304-355)||(38731623-38731674)
chr5 (302-364)||(6413444-6413506)
chr5 (295-401)||(8081124-8081227)
chr5 (294-401)||(9368801-9368904)
chr5 (294-401)||(18333475-18333578)
chr5 (294-344)||(38731848-38731898)
chr5 (145-206)||(3598572-3598633)
chr5 (145-206)||(4122740-4122801)
chr5 (145-206)||(5933288-5933349)
chr5 (145-206)||(6542422-6542483)
chr5 (291-344)||(20225065-20225118)
chr5 (291-364)||(21306891-21306964)
chr5 (291-364)||(21314729-21314802)
chr5 (295-364)||(24528544-24528613)
chr5 (145-202)||(29991261-29991318)
chr5 (291-348)||(43117902-43117959)
chr5 (291-347)||(8098338-8098394)
chr5 (291-347)||(19522108-19522164)
chr5 (291-343)||(24487652-24487704)
chr5 (291-347)||(33337462-33337518)
[»] scaffold0766 (1 HSPs)
scaffold0766 (281-401)||(6245-6361)
[»] chr8 (51 HSPs)
chr8 (304-407)||(38447447-38447546)
chr8 (291-404)||(22638186-22638295)
chr8 (145-206)||(3272879-3272940)
chr8 (145-206)||(13154398-13154459)
chr8 (291-401)||(15042677-15042783)
chr8 (291-401)||(17469789-17469895)
chr8 (291-401)||(17477036-17477142)
chr8 (145-206)||(24332421-24332482)
chr8 (295-401)||(24532432-24532534)
chr8 (145-206)||(26479457-26479518)
chr8 (145-206)||(31403076-31403137)
chr8 (291-401)||(39052936-39053042)
chr8 (291-401)||(39743500-39743606)
chr8 (291-347)||(20702818-20702874)
chr8 (281-401)||(39960162-39960279)
chr8 (281-401)||(10449971-10450087)
chr8 (295-406)||(8716080-8716187)
chr8 (291-345)||(34843140-34843194)
chr8 (287-344)||(4828092-4828149)
chr8 (294-400)||(5590378-5590480)
chr8 (294-347)||(18939307-18939360)
chr8 (291-401)||(19256593-19256699)
chr8 (145-206)||(27993440-27993501)
chr8 (145-206)||(28050742-28050803)
chr8 (291-401)||(28069364-28069470)
chr8 (291-344)||(29005888-29005941)
chr8 (148-205)||(31186535-31186592)
chr8 (145-206)||(31685829-31685890)
chr8 (291-348)||(42846612-42846669)
chr8 (291-347)||(24075313-24075369)
chr8 (374-406)||(30201610-30201642)
chr8 (294-406)||(4828259-4828367)
chr8 (291-404)||(37001194-37001303)
chr8 (294-401)||(11232204-11232307)
chr8 (294-347)||(3157569-3157622)
chr8 (145-206)||(6891937-6891998)
chr8 (145-206)||(6943816-6943877)
chr8 (374-407)||(8466810-8466843)
chr8 (291-364)||(12688076-12688149)
chr8 (291-401)||(19256827-19256933)
chr8 (291-364)||(20301265-20301338)
chr8 (291-364)||(21087897-21087970)
chr8 (282-347)||(27205181-27205246)
chr8 (377-406)||(29907815-29907844)
chr8 (291-364)||(35682788-35682861)
chr8 (145-205)||(9180204-9180264)
chr8 (291-343)||(10614946-10614998)
chr8 (291-347)||(10884086-10884141)
chr8 (291-339)||(15686047-15686095)
chr8 (291-347)||(27204985-27205041)
chr8 (291-347)||(27205083-27205139)
[»] chr4 (52 HSPs)
chr4 (303-406)||(44118878-44118977)
chr4 (291-401)||(35788630-35788736)
chr4 (282-401)||(35788865-35788980)
chr4 (145-206)||(989238-989299)
chr4 (145-206)||(11021832-11021893)
chr4 (145-206)||(17107591-17107652)
chr4 (145-206)||(22487379-22487440)
chr4 (291-401)||(22827509-22827615)
chr4 (145-206)||(46481076-46481137)
chr4 (291-347)||(9685653-9685709)
chr4 (291-347)||(12005476-12005532)
chr4 (145-205)||(13683163-13683223)
chr4 (281-401)||(22845444-22845560)
chr4 (145-204)||(46081539-46081598)
chr4 (294-401)||(39902573-39902676)
chr4 (302-406)||(53698993-53699093)
chr4 (145-206)||(5721111-5721172)
chr4 (291-401)||(6218410-6218516)
chr4 (145-206)||(13493047-13493108)
chr4 (145-206)||(16491806-16491867)
chr4 (145-206)||(16959927-16959988)
chr4 (145-206)||(17865135-17865196)
chr4 (291-401)||(21498766-21498872)
chr4 (291-401)||(28245533-28245639)
chr4 (145-206)||(37815500-37815561)
chr4 (145-206)||(39385324-39385385)
chr4 (145-206)||(43750106-43750167)
chr4 (291-401)||(50543574-50543680)
chr4 (291-347)||(1518185-1518241)
chr4 (291-347)||(22231315-22231371)
chr4 (308-406)||(27464272-27464366)
chr4 (291-347)||(53559297-53559353)
chr4 (147-206)||(12792735-12792794)
chr4 (147-206)||(20045963-20046022)
chr4 (305-364)||(35796763-35796822)
chr4 (294-364)||(400575-400645)
chr4 (293-347)||(5398221-5398275)
chr4 (282-364)||(22863478-22863560)
chr4 (148-202)||(26314642-26314696)
chr4 (368-406)||(28208414-28208452)
chr4 (148-206)||(32592906-32592964)
chr4 (291-344)||(9685422-9685475)
chr4 (291-401)||(21498325-21498431)
chr4 (319-401)||(27634116-27634194)
chr4 (294-347)||(53828533-53828586)
chr4 (291-347)||(5846167-5846223)
chr4 (304-364)||(11036766-11036826)
chr4 (291-347)||(14783194-14783250)
chr4 (295-339)||(30529937-30529981)
chr4 (291-347)||(35819135-35819191)
chr4 (304-401)||(37836051-37836144)
chr4 (291-347)||(50543337-50543393)
[»] chr2 (40 HSPs)
chr2 (145-206)||(17457881-17457942)
chr2 (145-206)||(18369176-18369237)
chr2 (281-401)||(16419473-16419589)
chr2 (281-401)||(40379206-40379322)
chr2 (145-206)||(3371461-3371522)
chr2 (145-206)||(12806708-12806769)
chr2 (291-401)||(40379451-40379557)
chr2 (145-206)||(41594114-41594175)
chr2 (145-206)||(42705111-42705172)
chr2 (291-347)||(2324495-2324551)
chr2 (134-206)||(7877487-7877559)
chr2 (291-355)||(17854936-17855000)
chr2 (294-342)||(27897513-27897561)
chr2 (146-206)||(37609119-37609179)
chr2 (148-206)||(13572633-13572691)
chr2 (148-206)||(30432758-30432816)
chr2 (145-206)||(4171684-4171745)
chr2 (291-401)||(5711446-5711552)
chr2 (145-206)||(14379276-14379337)
chr2 (145-206)||(19204751-19204812)
chr2 (145-206)||(29683333-29683394)
chr2 (319-401)||(33606089-33606167)
chr2 (145-202)||(33940844-33940901)
chr2 (291-347)||(2324261-2324317)
chr2 (134-206)||(2395305-2395377)
chr2 (149-205)||(6880137-6880193)
chr2 (291-347)||(15124555-15124611)
chr2 (291-355)||(29718341-29718405)
chr2 (375-406)||(10523219-10523250)
chr2 (291-403)||(14927071-14927179)
chr2 (148-206)||(6164061-6164119)
chr2 (302-364)||(16533551-16533613)
chr2 (306-401)||(17719371-17719462)
chr2 (148-206)||(28921355-28921413)
chr2 (291-344)||(19191617-19191670)
chr2 (291-401)||(28407800-28407906)
chr2 (291-401)||(32884078-32884184)
chr2 (319-401)||(37812533-37812611)
chr2 (291-347)||(37769950-37770006)
chr2 (304-344)||(40149023-40149063)
[»] scaffold0167 (1 HSPs)
scaffold0167 (145-206)||(4550-4611)
[»] scaffold0103 (1 HSPs)
scaffold0103 (145-206)||(43440-43501)
[»] scaffold0006 (1 HSPs)
scaffold0006 (146-206)||(212575-212635)
[»] scaffold0692 (1 HSPs)
scaffold0692 (291-401)||(5761-5867)
[»] scaffold0137 (1 HSPs)
scaffold0137 (145-206)||(36928-36989)
[»] scaffold0334 (1 HSPs)
scaffold0334 (295-347)||(4440-4492)
[»] scaffold0519 (1 HSPs)
scaffold0519 (294-401)||(2122-2225)
[»] scaffold0126 (1 HSPs)
scaffold0126 (148-206)||(36157-36215)
[»] scaffold0170 (1 HSPs)
scaffold0170 (145-206)||(8705-8766)
[»] scaffold0092 (1 HSPs)
scaffold0092 (291-364)||(5659-5732)
[»] scaffold0047 (1 HSPs)
scaffold0047 (294-347)||(12668-12721)
[»] scaffold0021 (1 HSPs)
scaffold0021 (145-206)||(118187-118247)
[»] scaffold0005 (1 HSPs)
scaffold0005 (291-347)||(56480-56536)


Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 173 - 495
Target Start/End: Complemental strand, 9830775 - 9830452
Alignment:
Q  173 ttgagggagtgaaatcaagtattctacatattacttatttaattggaccaaattacaattcgaatagattttgcgtagacgaaaacaaaaagtggtatat 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||    
T  9830775 ttgagggagtgaaatcaagtattctacatattacttatttaattggaccaaattgcaattcgaatagattttggatagaccaaaacaaaaagtggtatat 9830676  T
Q  273 ctgtcacgactctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt-ttatgtt 371  Q
     ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9830675 ttgtcacgactctgagagatcgtgattgaatctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattgttatgtt 9830576  T
Q  372 aggccatctcttatccgatgtgggactctttaacagcagcaaaagacatttttaaaccttactagtaatacagacatttttcataacactcgacgtatga 471  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  9830575 aggccatctcttatccgatgtgggactctttaacagcaacaaaagacatttttaaaccttactagtaatacagacatttgtcataacactcggcgtatga 9830476  T
Q  472 gttaagatgctaaaggagtattat 495  Q
    ||||||||||||||||||||||||    
T  9830475 gttaagatgctaaaggagtattat 9830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 51589883 - 51589819
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||| ||||||    
T  51589883 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccctcacttat 51589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 17452686 - 17452789
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||||||| |||    
T  17452686 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcttatctgat 17452781  T
Q  391 gtgggact 398  Q
    ||||||||    
T  17452782 gtgggact 17452789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 4112547 - 4112620
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||| | ||||||||||||||||||| ||| |||||||| ||||||| || |||||    
T  4112547 atcgtggttgtgcctaacacaatcccataaaatcggcttgtgaggtgatgattgcccctacttataaacacatt 4112620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 10913933 - 10913994
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  10913933 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 10913994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 17452835 - 17452941
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||||||| |||||||||||    
T  17452835 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgcccccacttataaatacat----tgtcaggccatgtcttatccgat 17452930  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  17452931 gtgggactctt 17452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 33619120 - 33619059
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  33619120 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 33619059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 35772341 - 35772235
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| | ||||||||||  |||||| || |||||    || |||||||||| ||||||||    
T  35772341 atcgtggttgggcctaacacaaccccacaaaaccggcttctgaggtaaggattgcccccacttataaacacatt----gtcaggccatctcctatccgat 35772246  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  35772245 gtgggactctt 35772235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 37172472 - 37172411
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  37172472 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 37172411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 42586446 - 42586551
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||||||||||||||    
T  42586446 atcgtggttgggcctaacacaaccccacaaaattggcttgtgaggtgaggattgccc-cacttatatacacat----tgtcaggccatctcttatccgat 42586540  T
Q  391 gtgggactctt 401  Q
    ||| |||||||    
T  42586541 gtgagactctt 42586551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 43191880 - 43191819
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  43191880 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 43191819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 50096292 - 50096353
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  50096292 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 50096353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25145492 - 25145548
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| |||||||||||||||| |||| || |||||||| ||||||||||||    
T  25145492 atcgtggttgggtctaacacaacctcacaaaaccgacttgtgaggtgaggattgccc 25145548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 400
Target Start/End: Complemental strand, 40079229 - 40079124
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| |||||| ||||||||    
T  40079229 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatctcctatccgat 40079134  T
Q  391 gtgggactct 400  Q
    || |||||||    
T  40079133 gtaggactct 40079124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 397
Target Start/End: Complemental strand, 52961646 - 52961557
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggac 397  Q
    ||||||||||| ||||||| |||||| |||| ||||||||||||| |||||| || ||||    ||| || ||||||| |||||||||||||||    
T  52961646 ctaacacaaccccataaaaccggcttttgaggtgaggattgccctcacttataaacacat----tgtcagaccatctcctatccgatgtgggac 52961557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 2859389 - 2859505
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| || ||||||| | |||||||||||||| | || ||||||||||| | ||||||||||  |||||| || ||||    ||| ||||||||     
T  2859389 actcttagaaatggtggttgggcctaacacaacctcacagaaccggcttgtgaggtaaggattgcccccacttataaacacat----tgtcaggccatca 2859484  T
Q  381 cttatccgatgtgggactctt 401  Q
    | |||||||||||||||||||    
T  2859485 cctatccgatgtgggactctt 2859505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 4113013 - 4113124
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| ||  |||||||    
T  4113013 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcccatccgat 4113108  T
Q  391 gtgggactctttaacag 407  Q
    |||||||| ||||||||    
T  4113109 gtgggact-tttaacag 4113124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 294 - 402
Target Start/End: Original strand, 31181523 - 31181627
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| ||||||| | ||||||||| ||||||||||||  |||||| || |||| |    | |||||||||||||||| |||||    
T  31181523 gtggttgggcctaacacaaccccataaaaccagcttgtgaggtgaggattgcccccacttataaacacatgt----tcaggccatctcttatccaatgtg 31181618  T
Q  394 ggactcttt 402  Q
    | |||||||    
T  31181619 gaactcttt 31181627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 33716 - 33777
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  33716 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 33777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 14602169 - 14602230
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  14602169 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctaaatattac 14602230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 20062022 - 20061961
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||||||    
T  20062022 ccctataatattcattttagtcatcattttgagggactaaaatcaaatattctacatattac 20061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 26244708 - 26244769
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  26244708 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattac 26244769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 27413424 - 27413371
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    ||||||||||   |||||||||||||| |||||||||||||||| |||||||||    
T  27413424 atcgtggttggacctaacacaacctcacaaaatcggcttgtgaggtgaggattg 27413371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 346
Target Start/End: Complemental strand, 27413669 - 27413604
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 346  Q
    ||||| ||| ||| |||||||| ||||||||||||||||||| ||  ||||||| |||||||||||    
T  27413669 actcttagaaatcatggttgagcctaacacaacctcataaaaccgatttgtgaggtgaggattgcc 27413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 50624925 - 50624986
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  50624925 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 50624986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 51589066 - 51589005
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589066 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 38733459 - 38733353
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||| |||| | |||||||||||||| |||| |||| | |||| ||||||||||||| ||||||  |||||| |  ||| || ||||| | ||||||||    
T  38733459 atcgttgttgggcctaacacaacctcacaaaaccggcctatgaggtgaggattgccctcacttat--aaacatat--tgtcagaccatcacatatccgat 38733364  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  38733363 gtgggactctt 38733353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 51589303 - 51589239
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  51589303 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 51589239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 348
Target Start/End: Original strand, 5953497 - 5953540
Alignment:
Q  305 taacacaacctcataaaatcggcttgtgagctgaggattgccct 348  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||    
T  5953497 taacacaacctcacaaaatcggctcgtgaggtgaggattgccct 5953540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 406
Target Start/End: Complemental strand, 17468341 - 17468310
Alignment:
Q  375 ccatctcttatccgatgtgggactctttaaca 406  Q
    ||||||||||||||||||||||||||||||||    
T  17468341 ccatctcttatccgatgtgggactctttaaca 17468310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 406
Target Start/End: Original strand, 21626423 - 21626457
Alignment:
Q  372 aggccatctcttatccgatgtgggactctttaaca 406  Q
    ||||||||||||||| |||||||||||||||||||    
T  21626423 aggccatctcttatctgatgtgggactctttaaca 21626457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 25137313 - 25137416
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| |||||| |||| |||||||||||| ||||||| || | ||    ||| |||||| ||| || ||||||||    
T  25137313 gtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgcccatacttataaacaaat----tgtcaggccaactcctaaccgatgtg 25137408  T
Q  394 ggactctt 401  Q
    ||||||||    
T  25137409 ggactctt 25137416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 28031809 - 28031867
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  28031809 tataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 28031867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 355
Target Start/End: Complemental strand, 3170067 - 3170014
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    ||||||||||||| || |||| ||||||||||| | ||||||||||| ||||||    
T  3170067 gtctaacacaaccccacaaaaccggcttgtgaggtaaggattgccctcacttat 3170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 355
Target Start/End: Original strand, 5953206 - 5953267
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    ||||||||| |||||||||||| | ||||||| ||||||||  |||||||| ||| ||||||    
T  5953206 gtggttgagcctaacacaaccttacaaaatcgacttgtgaggagaggattgtcctcacttat 5953267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 9830819 - 9830786
Alignment:
Q  110 aagtccctgctaaatttgttaattttgaaattta 143  Q
    |||||||||||||||||||||||||||| |||||    
T  9830819 aagtccctgctaaatttgttaattttgatattta 9830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 39288378 - 39288317
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||| ||||||    
T  39288378 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacctattac 39288317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 40316057 - 40316110
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||| |||||||||    
T  40316057 atcgtggttggatctaacacaacctcacaaaaccggcttatgaggtgaggattg 40316110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 42154909 - 42154970
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| ||||||| |||||||    
T  42154909 ccctataatattcattttagtcctcgttttgagggattaaaatcaaatattctaaatattac 42154970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 47829121 - 47829182
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||  | | ||||||| |||||||||||||||    
T  47829121 ccctataatattcattttagtcctcattttgagaaactaaaatcaaatattctacatattac 47829182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 343
Target Start/End: Original strand, 2859638 - 2859686
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||| | |||||||||||||| |||| ||||||||||| ||||||||    
T  2859638 tggttggggctaacacaacctcacaaaaccggcttgtgaggtgaggatt 2859686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 3169843 - 3169787
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  3169843 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaagattgccc 3169787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 9499322 - 9499259
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||||||| ||||||||| || |||| ||| ||||||| ||| |||||||| |||||||    
T  9499322 atcgtggttgagtcgaacacaaccccacaaaaccgg-ttgtgaggtgaagattgcccctacttat 9499259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 29584557 - 29584613
Alignment:
Q  150 taatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||| ||||||||||| ||||||||||||||   ||||| | |||||||||||||||    
T  29584557 taatattcattttagtccttattttgagggacacaaatcgaatattctacatattac 29584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 31432237 - 31432293
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||| ||||||| || |||| ||||||||||| ||||||||||||    
T  31432237 atcgtggttgggcctagcacaaccccacaaaaccggcttgtgaggtgaggattgccc 31432293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 31496378 - 31496418
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgt 331  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  31496378 atcgtgattgagtctaacacaaccccataaaaccggcttgt 31496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 33156810 - 33156754
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33156810 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33156754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 35772106 - 35772050
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||    
T  35772106 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgccc 35772050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 52907461 - 52907405
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| |||| |||||||| || |||| | ||||||||| ||||||||||||    
T  52907461 atcgtggttgggtcttacacaaccccacaaaaccagcttgtgaggtgaggattgccc 52907405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 406
Target Start/End: Original strand, 11211686 - 11211796
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | | ||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    |||||||||||||||||||||     
T  11211686 atcgtggttgggcccaacacaaccccacaaaaccggcttgtgaggtgaggattgcccc-acttataaagacatt----gttaggccatctcttatccgac 11211780  T
Q  391 gtgggactctttaaca 406  Q
    ||||||||||||||||    
T  11211781 gtgggactctttaaca 11211796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 19476553 - 19476614
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| |||||||||||||| ||||||||||| | ||||||| |||||||||||||||    
T  19476553 ccctataatattcattttagtactcattttgagggactaaaatcaaatattctacatattac 19476614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Original strand, 42985134 - 42985185
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 346  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  42985134 tggttgagtctaacacaacctcacaaaatcgacttgtgaggtgaggattgcc 42985185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 345
Target Start/End: Original strand, 26028972 - 26029022
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 345  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  26028972 tggttgggtctaacacaacctcacaaaatcggcttgtgaggtgaggattgc 26029022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 36277233 - 36277339
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |||| ||||||    
T  36277233 atcgtggttgggactaacacaaccccacaaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcttgtccgat 36277328  T
Q  391 gtgggactctt 401  Q
    ||| |||||||    
T  36277329 gtgagactctt 36277339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 42517026 - 42517087
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  42517026 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 42517087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 48661562 - 48661668
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| ||||||||||| |||| |||| ||||||||||| ||||||||||||  || ||| || ||||    ||| ||| |||||| |||| |||    
T  48661562 atcgtggttgggtctaacacaatctcacaaaaccggcttgtgaggtgaggattgcccccacctataaatacat----tgtcaggtcatctcctatctgat 48661657  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  48661658 gtgggactctt 48661668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 23796034 - 23796086
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||| |||||||| || ||||||||||||||||||| ||||||||||||    
T  23796034 tggttgagcctaacacatccccataaaatcggcttgtgaggtgaggattgccc 23796086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 34487303 - 34487362
Alignment:
Q  147 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  34487303 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 34487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 1596902 - 1596799
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | |||||||||||  | |||| |||||||| || ||||||||||||  |||||| |||||||    ||||||||||| || | |||||||||    
T  1596902 gtggttgggcctaacacaaccctacaaaaccggcttgtaaggtgaggattgcccccacttataaaaacat----tgttaggccatgtcctgtccgatgtg 1596807  T
Q  394 ggactctt 401  Q
    ||||||||    
T  1596806 ggactctt 1596799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 22574921 - 22574840
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||| ||| |||||||||| | ||||||||| |||| |||  ||||||||||| ||||||||||||| |||||| ||||||||    
T  22574921 ctcttagaaatcgtggttgggcctaacacaaactcacaaatacggcttgtgaggtgaggattgccctcacttat-aaaacatt 22574840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 23177209 - 23177267
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| |||||||| ||||| | ||||||| |||||||||||||||    
T  23177209 tataatattcattttagtccttattttaagggattaaaatcaaatattctacatattac 23177267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 24580 - 24519
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  24580 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 24519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 3038095 - 3038197
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 394  Q
    |||||| | ||||||||||| || |||| ||||||||||  ||||||||||||  |||||| || ||||    |||||| | ||||||||| ||||||||    
T  3038095 tggttgggcctaacacaaccccacaaaaccggcttgtgacgtgaggattgcccccacttataaacacat----tgttagacaatctcttattcgatgtgg 3038190  T
Q  395 gactctt 401  Q
    |||||||    
T  3038191 gactctt 3038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 17202256 - 17202150
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||| |||||||  |||||| || | ||    ||| |||||| |||||| |||||    
T  17202256 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgagaattgcccccacttataaacaaat----tgtcaggccaactcttaaccgat 17202161  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  17202160 gtgggactctt 17202150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 19157852 - 19157913
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  19157852 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 19157913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 20757251 - 20757312
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||| |||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  20757251 ccctgtaatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 20757312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 21054963 - 21055066
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| |||||||| | |||||||| ||    
T  21054963 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttat--aaacatat--tgtcaggccatcacctatccgatatg 21055058  T
Q  394 ggactctt 401  Q
    ||||||||    
T  21055059 ggactctt 21055066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 25620213 - 25620140
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  25620213 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 25620140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 29469682 - 29469576
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469682 atcgtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469587  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  29469586 gtgggactctt 29469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 31579655 - 31579594
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||| | | ||||||| |||||||||||||||    
T  31579655 ccctataatattcattttagtcctcattttgaggtactaaaatcaaatattctacatattac 31579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 40729222 - 40729283
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  40729222 ccctataatattcattttagttctcattttgagggactaaaattaaatattctacatattac 40729283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 355
Target Start/End: Complemental strand, 40746339 - 40746278
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||| ||||||    
T  40746339 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccctcacttat 40746278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 48243068 - 48243141
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  48243068 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 48243141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 22364875 - 22364816
Alignment:
Q  146 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22364875 cctataatattcattttagtcct-attttgagggactaaaatcaaatattctacatattac 22364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 24432196 - 24432148
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 342  Q
    |||||||||||||| ||||||||| |||||| ||||||||| |||||||    
T  24432196 gtggttgagtctaatacaacctcacaaaatcagcttgtgagatgaggat 24432148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 34027470 - 34027414
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  34027470 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 34027414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 6782938 - 6782883
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 346  Q
    |||||||||||| ||||||||||| || |||| |||||||| || |||||||||||    
T  6782938 atcgtggttgagcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcc 6782883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 36206070 - 36206125
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 346  Q
    |||||||||||| |||| |||||| ||||||| ||||||||||| ||| |||||||    
T  36206070 atcgtggttgagcctaatacaaccccataaaaccggcttgtgaggtgaagattgcc 36206125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 4507009 - 4506955
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 345  Q
    ||||| |||| ||||||||||||| ||||||| || |||||||| ||||||||||    
T  4507009 atcgtagttgggtctaacacaaccccataaaaccgacttgtgaggtgaggattgc 4506955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 21861368 - 21861265
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||| | || |||| |||||||| || ||||||||||||| |||||| || ||||    ||| ||||||| || | |||||||||    
T  21861368 gtggttgggcctaacacaatcccacaaaaccggcttgtaaggtgaggattgccctcacttataaacacat----tgtcaggccatgtcctgtccgatgtg 21861273  T
Q  394 ggactctt 401  Q
    ||||||||    
T  21861272 ggactctt 21861265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 21861603 - 21861533
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    ||||||| | ||||||||||| || ||||||||||||| || ||||||||||||  |||||| || |||||    
T  21861603 gtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgcccccacttataaacacatt 21861533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 47710517 - 47710414
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47710517 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47710422  T
Q  394 ggactctt 401  Q
     |||||||    
T  47710421 agactctt 47710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 47722173 - 47722070
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || ||||  |||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||    
T  47722173 gtggttgggcctaacacaaccccacaaaactggcttgtgaggtgaggattgcccccacttataaacacat----tgtaaggccatcacctatccgatgtg 47722078  T
Q  394 ggactctt 401  Q
     |||||||    
T  47722077 agactctt 47722070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 21822117 - 21822064
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||| ||||||||||| | || |||||| ||||||||| ||||||||||||    
T  21822117 gtggttgggtctaacacaaacccacaaaatctgcttgtgagatgaggattgccc 21822064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 22954564 - 22954503
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||| | || ||||||||||| |  |||||| |||||||||||||||    
T  22954564 ccctataatattcattttaatcctcattttgagggactagaatcaaatattctacatattac 22954503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 29469917 - 29469811
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||  || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  29469917 atcgtggttgggcctaacacaactccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 29469822  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  29469821 gtgggactctt 29469811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 33996318 - 33996424
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||  || |||| || |||||||| ||| ||||||||  |||||| || ||||| |    |||||||| || ||||||||    
T  33996318 atcgtggttgggcctaacacaactccacaaaaccgacttgtgaggtgaagattgcccccacttataaatacattat----taggccatgtcctatccgat 33996413  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  33996414 gtgggactctt 33996424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 34595543 - 34595482
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||| ||| || ||||||||||| | || |||| |||||||||||||||    
T  34595543 ccctataatattcatttcagtcctcattttgagggactaaattcaaatattctacatattac 34595482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 40991754 - 40991803
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||||||||||||||||||||| |||| | | ||||||| ||||||||    
T  40991754 gtggttgagtctaacacaacctcacaaaaccagattgtgagatgaggatt 40991803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Original strand, 48243448 - 48243517
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||| ||||||||||||| || |||| |||||||| || ||||||||||||  |||||| || |||||    
T  48243448 tggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattgcccccacttataaacacatt 48243517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 2544454 - 2544510
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| || |||||||| ||||||||||||    
T  2544454 atcgtggttgggcctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 2544510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 4886406 - 4886350
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | |||||||||||||   ||| ||||||||||| ||||||||||||    
T  4886406 atcgtggttgggcctaacacaacctcgccaaaccggcttgtgaggtgaggattgccc 4886350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 10903162 - 10903098
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| |||||||| ||| |||||||    
T  10903162 atcgtggttggggctaacacaactccacaaaaccggcttgtgaggtgaggattacccctacttat 10903098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 21311415 - 21311455
Alignment:
Q  303 tctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||||||||||||||||||||  ||||||| ||||||||    
T  21311415 tctaacacaacctcataaaatcgatttgtgagatgaggatt 21311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 31257038 - 31257094
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||||||||||||||| || ||||  || ||||||| ||| ||||||||    
T  31257038 atcgtggttgagtctaacacaaccccacaaaactggtttgtgaggtgaagattgccc 31257094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 31485679 - 31485739
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| ||| |||| |||||||| || ||||||||||||  |||||| ||||||||    
T  31485679 ctaacacaacttcacaaaaccggcttgtcaggtgaggattgcccccacttataaaaacatt 31485739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 9705340 - 9705225
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 381  Q
    |||| ||| |||||||||| ||||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||||| ||||| ||    
T  9705340 ctcttagaaatcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgttaagccatgtc 9705245  T
Q  382 ttatccgatgtgggactctt 401  Q
     |||||||||||||||||||    
T  9705244 ctatccgatgtgggactctt 9705225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 12329951 - 12330057
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||  |||||| || ||||    |||||   ||| |||||||||||    
T  12329951 atcgtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgcccccacttataaacacat----tgttatatcatatcttatccgat 12330046  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  12330047 gtgggactctt 12330057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 21690799 - 21690743
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||    
T  21690799 atcgtggttgagcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccc 21690743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 6054489 - 6054374
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 381  Q
    |||| ||| |||||||||| |||||||||||||  | |||||||| ||||||| ||||||||||||  |||||| || || |    ||| || |||||||    
T  6054489 ctcttagaaatcgtggttgggtctaacacaaccctacaaaatcggtttgtgaggtgaggattgcccccacttataaatacct----tgtcagaccatctc 6054394  T
Q  382 ttatccgatgtgggactctt 401  Q
    ||||||||||| ||||||||    
T  6054393 ttatccgatgttggactctt 6054374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 3484943 - 3485004
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3484943 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 3485004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 4868584 - 4868690
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  4868584 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 4868679  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  4868680 gtgggactctt 4868690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 5404729 - 5404790
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  5404729 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 5404790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 6542950 - 6543056
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||  |||||| || ||||    ||| || ||||||||||||||||    
T  6542950 atcgtggttgggtctaacacaaccccacaaaaccggcttctgaggtgatgattgcccccacttataaacacat----tgtcagaccatctcttatccgat 6543045  T
Q  391 gtgggactctt 401  Q
    |||| ||||||    
T  6543046 gtggaactctt 6543056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 12330298 - 12330403
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| || ||||||||    
T  12330298 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgagatgaggattgccc-cacttataaacacat----tgtcagaccatgtcctatccgat 12330392  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  12330393 gtgggactctt 12330403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 25065101 - 25065207
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| |||||||||||| |||||||  |||||| |  ||| || |||| || ||||||||    
T  25065101 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccctacttat--aaacatat--tgtcagaccatgtcctatccgat 25065196  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  25065197 gtgggactctt 25065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 28853647 - 28853705
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  28853647 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 28853705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 33494613 - 33494510
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||||    | | |||||||| |||||||||||    
T  33494613 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacatattt----tcaagccatctcctatccgatgtg 33494518  T
Q  394 ggactctt 401  Q
    ||||||||    
T  33494517 ggactctt 33494510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 4868820 - 4868893
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  4868820 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 4868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 8926346 - 8926407
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||||||    
T  8926346 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattac 8926407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 12330186 - 12330259
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | |||||||||||||| |||| ||||||||||| ||||| ||||||  |||||| || |||||    
T  12330186 atcgtggttgggcctaacacaacctcacaaaaccggcttgtgaggtgagggttgcccccacttataaacacatt 12330259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 17238197 - 17238254
Alignment:
Q  149 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  17238197 ataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 17238254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 19661573 - 19661512
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| |||||||||||  | ||||||||||| | ||||||| |||||||||||||||    
T  19661573 ccctataatattcattttagtcttcattttgagggactaaaatcaaatattctacatattac 19661512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 29819545 - 29819606
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  29819545 ccctataatattcattttagtcctcattttgagggactaaaattaaatattctacatattac 29819606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 30256889 - 30256779
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  ||||||  |||||| |  ||| ||| |||| | ||||||||    
T  30256889 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc-cacttat--aaacatat--tgtcaggtcatcacctatccgat 30256795  T
Q  391 gtgggactctttaaca 406  Q
    ||||||||||| ||||    
T  30256794 gtgggactcttaaaca 30256779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 30609090 - 30609029
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  30609090 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 30609029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4601117 - 4601173
Alignment:
Q  150 taatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||| |||||||||||  ||||||||||||| | ||||||| |||||||||||||||    
T  4601117 taatattcattttagtctttattttgagggactaaaatcaaatattctacatattac 4601173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 6237715 - 6237815
Alignment:
Q  292 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 391  Q
    ||||| ||||||||||||||||||||      ||||||||||| ||||||||||||| |||||| || ||||    ||| ||||| || ||||||| |||    
T  6237715 tcgtgattgagtctaacacaacctcac-----cggcttgtgaggtgaggattgccctcacttataaatacat----tgtcaggccttcacttatccaatg 6237805  T
Q  392 tgggactctt 401  Q
    ||||||||||    
T  6237806 tgggactctt 6237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 8026466 - 8026410
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026466 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 8026681 - 8026625
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  8026681 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8026625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 16525341 - 16525413
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| | | |||||||  |||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  16525341 ttgaaattgatctctataatactcattttagtcctcattttgagggactaaaatcaaatattctacatattac 16525413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 4906872 - 4906810
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    ||||||||||| | |||||||  |||||||||| ||||||||||||| |||||| || |||||    
T  4906872 gtctaacacaatcccataaaactggcttgtgagatgaggattgccctcacttataaacacatt 4906810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 13353275 - 13353172
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  13353275 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 13353180  T
Q  394 ggactctt 401  Q
    ||||||||    
T  13353179 ggactctt 13353172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 31717337 - 31717395
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||| ||| |||||||||||||||    
T  31717337 tataatattcattttagtcctcattttgagggactaaaaacaaatattctacatattac 31717395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 33796400 - 33796297
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  33796400 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 33796305  T
Q  394 ggactctt 401  Q
    ||||||||    
T  33796304 ggactctt 33796297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 5923986 - 5924047
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||| ||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  5923986 ccctagaatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 5924047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 7915926 - 7915872
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| ||||||||  ||| || |||||||||||||||| ||||||||||||    
T  7915926 atcgtggttgggtctaaca--accccacaaaatcggcttgtgaggtgaggattgccc 7915872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 8936603 - 8936664
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  ||||||| || | ||||||| |||||||||||||||    
T  8936603 ccctataatattcattttagtcctcgttttgagagactaaaatcaaatattctacatattac 8936664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 298 - 347
Target Start/End: Complemental strand, 20830820 - 20830771
Alignment:
Q  298 ttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||||||||||| |||||| | ||||||| ||| ||||||||    
T  20830820 ttgagtctaacacaacctcacaaaatcagtttgtgaggtgatgattgccc 20830771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 33783621 - 33783564
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 202  Q
    ||||||||| ||| ||||||| || ||||||||||| | ||||||| |||||||||||    
T  33783621 ccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacata 33783564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 5648692 - 5648752
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||||||| |||| ||||||||||| ||| ||||| ||||| |||| || |||||    
T  5648692 ctaacacaacctcacaaaaccggcttgtgaggtgatgattgtccttaattataaacacatt 5648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 11721982 - 11721926
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  11721982 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 11721926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 17147680 - 17147773
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| || |||||||||||||||||||    
T  17147680 ctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggtcatgtcctatccgatgtgggactctt 17147773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 20373647 - 20373584
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||| | ||||||||||| || ||||| |||||||||| ||||||||||| | ||||||    
T  20373647 atcgtggttgggcctaacacaaccccacaaaat-ggcttgtgaggtgaggattgccatcacttat 20373584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 30256655 - 30256599
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  30256655 atcgtggttgggcctaacacaaccccacaaaaccggtttgtgagttgaggattgccc 30256599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 5e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 54368593 - 54368487
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| ||||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || |||||||     |||||||||  |||| |||    
T  54368593 atcgtggttgggtctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacattttc----aggccatcttctatcggat 54368498  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  54368497 gtgggactctt 54368487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 291 - 406
Target Start/End: Original strand, 45138978 - 45139089
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| |||| |||||||| || |||| ||||||||||| ||||||||||||  |||||| || || |    ||| ||||||||||||||| |||    
T  45138978 atcgtggttgggtcttacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttattaacacgt----tgtcaggccatctcttatcagat 45139073  T
Q  391 gtgggactctttaaca 406  Q
    |||||||| |||||||    
T  45139074 gtgggactatttaaca 45139089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 16056507 - 16056568
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  16056507 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 16056568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 46962817 - 46962745
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  46962817 ttgaaattgatccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 46962745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 20327621 - 20327727
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20327621 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcctatccgat 20327716  T
Q  391 gtgggactctt 401  Q
    |||||| ||||    
T  20327717 gtgggattctt 20327727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 26582836 - 26582775
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  26582836 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 26582775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 27934610 - 27934671
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  27934610 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 27934671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 32315600 - 32315539
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  32315600 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 32315539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 35038201 - 35038307
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| |||||||| | ||||||||    
T  35038201 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacat----tgtcaggccatcacctatccgat 35038296  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  35038297 gtgggactctt 35038307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 52835704 - 52835765
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  52835704 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 52835765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 282 - 406
Target Start/End: Original strand, 45138800 - 45138920
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 381  Q
    |||| ||| |||||||||| |||| | |||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||  || |||||||    
T  45138800 ctctaagaaatcgtggttgggtctcatacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgccagaccatctc 45138895  T
Q  382 ttatccgatgtgggactctttaaca 406  Q
    ||||||||||||||||  |||||||    
T  45138896 ttatccgatgtgggacaatttaaca 45138920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 33162541 - 33162483
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  33162541 tataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 33162483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 38791460 - 38791563
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||||||  ||||||| ||||||||| ||| |||||| || ||||    ||| || ||||||| |||||||||||    
T  38791460 gtggttgggcctaacacaaccccacaaaatcgatttgtgaggtgaggattgtcctcacttataaatacat----tgtcagaccatctcctatccgatgtg 38791555  T
Q  394 ggactctt 401  Q
    ||||||||    
T  38791556 ggactctt 38791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 14546060 - 14545999
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| || ||||||||||||    
T  14546060 ccctataatattcattttagttctcattttgagggactaaaatcaaatactctacatattac 14545999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 16926956 - 16927062
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||||||||||  |||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |  ||||||||    
T  16926956 atcgtggttgagcttaacacaaccccacaaaaccggcttgtgagatgaggattacccccacttataaacacat----tgtcaggccatgttctatccgat 16927051  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  16927052 gtgggactctt 16927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 20303071 - 20303177
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||| | || |||| ||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  20303071 atcgtggttgagcctaacacaatcccacaaaaccggtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 20303166  T
Q  391 gtgggactctt 401  Q
    |||||| ||||    
T  20303167 gtgggattctt 20303177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 22729174 - 22729072
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  22729174 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 22729079  T
Q  394 ggactct 400  Q
    |||||||    
T  22729078 ggactct 22729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 29838518 - 29838457
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  29838518 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 29838457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 49500002 - 49500063
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  49500002 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 49500063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 50645631 - 50645692
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  50645631 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 50645692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 1723083 - 1723139
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  1723083 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 1723139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 11589862 - 11589806
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  11589862 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 11589806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 31317305 - 31317249
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||| ||||||||| | || |||| ||||||||||| ||||||||||||    
T  31317305 atcgtggttgagcctaacacaatcccacaaaaccggcttgtgaggtgaggattgccc 31317249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 401
Target Start/End: Original strand, 35038436 - 35038541
Alignment:
Q  292 tcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatg 391  Q
    ||||||||| | ||||||||||| || |||| | |||||| || ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||    
T  35038436 tcgtggttgggcctaacacaaccccacaaaaccagcttgtcaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatg 35038531  T
Q  392 tgggactctt 401  Q
    ||||||||||    
T  35038532 tgggactctt 35038541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 49121875 - 49121935
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 205  Q
    ||||||||| |||| |||||| || ||||||||||| | ||||||| ||||||||||||||    
T  49121875 ccctataatattcactttagtcctcattttgagggactaaaatcaaatattctacatatta 49121935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 24866274 - 24866219
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcc 346  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||    
T  24866274 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcc 24866219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 347
Target Start/End: Complemental strand, 45828083 - 45828040
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||    
T  45828083 ctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 45828040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 55092368 - 55092427
Alignment:
Q  147 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  55092368 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattac 55092427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 347
Target Start/End: Complemental strand, 34610648 - 34610582
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||| ||| || ||||||| ||||||||||||| || |||| || |||||||| ||||||||||||    
T  34610648 actcttagaaattgtggttgggtctaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 34610582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Original strand, 13741111 - 13741160
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    ||||||| ||||||||||||| || |||| ||||||||||| ||||||||    
T  13741111 gtggttgggtctaacacaaccccaaaaaaccggcttgtgaggtgaggatt 13741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 16239668 - 16239562
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||| | || |||| ||||||||||| ||||| ||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  16239668 atcgtggttgggcctaacacaatcccacaaaaccggcttgtgaggtgaggtttgcccccacttataaacacat----tgtcaggccatgtcctatccgat 16239573  T
Q  391 gtgggactctt 401  Q
    ||| |||||||    
T  16239572 gtgagactctt 16239562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 20327860 - 20327962
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 394  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||||||    
T  20327860 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgatgtgg 20327955  T
Q  395 gactctt 401  Q
    |||||||    
T  20327956 gactctt 20327962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 38807697 - 38807758
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || |||||||||||   ||||||| |||| ||||||||||    
T  38807697 ccctataatattcattttagtcctcattttgagggacaaaaatcaaatattttacatattac 38807758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 42093615 - 42093558
Alignment:
Q  149 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| |||||||| ||||||    
T  42093615 ataatattcattttagtcctcattttgagggactaaaatcaaatattctacgtattac 42093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 54567969 - 54567896
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  54567969 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 54567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 4155401 - 4155345
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  4155401 atcgtggttgggcctaacacaaccccacaaaaccggcttttgaggtgaggattgccc 4155345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 6487340 - 6487392
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||||||| | |||| |||||| ||||||| ||||||||||| ||||||||    
T  6487340 atcgtggttgggcctaaaacaaccccataaaaccggcttgtgaggtgaggatt 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 7029533 - 7029605
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| | ||||||||| |||| |||||| || ||||||||  | | ||||||| |||||||||||||||    
T  7029533 ttgaaattgatccctataatattcaatttagtcctcattttgagaaattaaaatcaaatattctacatattac 7029605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 351
Target Start/End: Complemental strand, 33205542 - 33205482
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttac 351  Q
    |||||||||| | ||||||||||| |  ||||  |||||||||| ||||||||||||||||    
T  33205542 atcgtggttgggcctaacacaaccccgcaaaactggcttgtgaggtgaggattgcccttac 33205482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 50052546 - 50052602
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||  ||||||||||||    
T  50052546 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaagtgaggattgccc 50052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 50930768 - 50930667
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    |||| |||||||| || |||| ||  ||||||| ||||||||||||  |||||| || |||| |||    ||||||||| ||||| ||||||||| ||||    
T  50930768 gtcttacacaaccccacaaaaccgttttgtgaggtgaggattgcccccacttataaacacatgtta----aggccatcttttatcagatgtgggagtctt 50930673  T
Q  402 taacag 407  Q
    ||||||    
T  50930672 taacag 50930667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 7133273 - 7133345
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| | ||||||||| ||||||||||| || ||||||||||||| ||||||| |||||||||||||||    
T  7133273 ttgaaattgatccctataatattcattttagtcctcattttgagggagtaaaatcaaatattctacatattac 7133345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 24346511 - 24346614
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24346511 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 24346606  T
Q  394 ggactctt 401  Q
    ||||||||    
T  24346607 ggactctt 24346614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 407
Target Start/End: Original strand, 1564574 - 1564686
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||||| || ||||  | |||||||  ||||||||||||  |||||| |  |||||    || || ||||||||||||||||    
T  1564574 atcgtggttgagcctaacacaaccccacaaaactgtcttgtgatgtgaggattgcccccacttataatcacatt----gtcagaccatctcttatccgat 1564669  T
Q  391 gtgggactctttaacag 407  Q
    |||||||||||||||||    
T  1564670 gtgggactctttaacag 1564686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 41666754 - 41666870
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  41666754 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgt 41666849  T
Q  381 cttatccgatgtgggactctt 401  Q
    | | |||||||||||||||||    
T  41666850 cctgtccgatgtgggactctt 41666870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 406
Target Start/End: Complemental strand, 15438950 - 15438843
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 394  Q
    ||||||||||||||||||||  | |||||||||||||||| ||||||||||||  |||||| || ||||    | | || ||||||| |||||||||||     
T  15438950 tggttgagtctaacacaaccctagaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tatcagaccatctcatatccgatgtga 15438855  T
Q  395 gactctttaaca 406  Q
     |||||||||||    
T  15438854 aactctttaaca 15438843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 24269881 - 24269983
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||||| ||||||||||| ||||||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  24269881 gtggttgagcctaacacaaccccataaaaccggcttgtgaggtgaggattaccc-cacttataaacacat----tgtcaggccatgtcctatccgatgtg 24269975  T
Q  394 ggactctt 401  Q
    ||||||||    
T  24269976 ggactctt 24269983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 291 - 406
Target Start/End: Complemental strand, 28510168 - 28510057
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||| | |||||| || ||||    ||| ||| ||||||||||| |||    
T  28510168 atcgtggttgggcctaacacaaccccacaaaaccggcttatgagatgaggattgccttcacttataaacacat----tgtcaggtcatctcttatctgat 28510073  T
Q  391 gtgggactctttaaca 406  Q
    || |||||||||||||    
T  28510072 gttggactctttaaca 28510057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 6497351 - 6497412
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  6497351 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 6497412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 10461569 - 10461508
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  10461569 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 10461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 22394348 - 22394287
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22394348 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 22394287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 24346744 - 24346850
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| ||||||||||||| || |||| ||||||||||| |||| ||| |||  |||||| || ||||    ||| ||||||| |||||| ||||    
T  24346744 atcgtggttgggtctaacacaaccccacaaaaccggcttgtgaggtgagtattacccccacttataaatacat----tgtcaggccatgtcttattcgat 24346839  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  24346840 gtgggactctt 24346850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 41667000 - 41667106
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  41667000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgat 41667095  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  41667096 gtgggactctt 41667106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 27133000 - 27133064
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  27133000 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 27133064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 334
Target Start/End: Complemental strand, 9187363 - 9187320
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgag 334  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  9187363 atcgtggttgagtctaacacaaccccacaaaatcggcttgtgag 9187320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 17352445 - 17352547
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||||| ||||| |||||||| |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| ||| |||||||||| |||||||    
T  17352445 gtggttgagcctaacgcaacctcacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggtcatctcttat-cgatgtg 17352539  T
Q  394 ggactctt 401  Q
    ||||||||    
T  17352540 ggactctt 17352547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 14868832 - 14868893
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| || |||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  14868832 ccctataatatttattttagtcctcattttgagggactaaaatcaaatattctacatattac 14868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 18786205 - 18786144
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||| |||||||||    
T  18786205 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattcgacatattac 18786144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 24491067 - 24491006
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||||| |||||    
T  24491067 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacacattac 24491006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 24531676 - 24531603
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| |  |||||||||| || |||||||||||||||| ||||||||||||  |||||| || |||||    
T  24531676 atcgtggttgggcataacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacatt 24531603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 41137300 - 41137361
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || |||||| |||| | ||||||| |||||||||||||||    
T  41137300 ccctataatattcattttagtcctcattttgggggactaaaatcaaatattctacatattac 41137361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 406
Target Start/End: Complemental strand, 7369798 - 7369690
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgtt-aggccatctcttatccgatgt 392  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||| |||||  ||||||  ||||| ||   ||| | |||||||||||||| ||||    
T  7369798 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggactgcccccacttat--aaacactt---gttcatgccatctcttatccaatgt 7369704  T
Q  393 gggactctttaaca 406  Q
    ||||||||||||||    
T  7369703 gggactctttaaca 7369690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 355
Target Start/End: Original strand, 17015890 - 17015950
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||| | ||||||||||| || |||||||||||||||| |||| |||||||| ||||||    
T  17015890 tggttgggcctaacacaaccccacaaaatcggcttgtgaggtgagaattgccctcacttat 17015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 19522397 - 19522341
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| ||||||||||||| || |||||||||||||||| |||  |||||||    
T  19522397 atcgtggttgtgtctaacacaaccccacaaaatcggcttgtgaggtgattattgccc 19522341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25258101 - 25258157
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25258101 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25258157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25258308 - 25258364
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25258308 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25321891 - 25321947
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  25321891 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 25321947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 25322098 - 25322154
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||||||||| |||||||||| || |||| || |||||||| ||||||||||||    
T  25322098 atcgtggttgagtttaacacaaccccacaaaaccgacttgtgaggtgaggattgccc 25322154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 355
Target Start/End: Original strand, 38731623 - 38731674
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    ||||||||||||||||||||||||||||||| ||  |||||| || ||||||    
T  38731623 ctaacacaacctcataaaatcggcttgtgaggtggtgattgctctcacttat 38731674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 6413444 - 6413506
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    ||||||||||||| || ||||||||||| |||| ||||||||||||  |||||| || |||||    
T  6413444 gtctaacacaaccccacaaaatcggcttatgaggtgaggattgcccccacttataaacacatt 6413506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 8081124 - 8081227
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  8081124 tggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 8081219  T
Q  394 ggactctt 401  Q
    ||||||||    
T  8081220 ggactctt 8081227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 9368904 - 9368801
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || | |||||||||||||  |||| |||||||  |||||| || |||||    || | |||||||| |||||||||||    
T  9368904 gtggttgggcctaacacaaccccacataatcggcttgtgaagtgagaattgcccccacttataaacacatt----gtcatgccatctcctatccgatgtg 9368809  T
Q  394 ggactctt 401  Q
    ||||||||    
T  9368808 ggactctt 9368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 18333475 - 18333578
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| || ||||||| |||||||||||    
T  18333475 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcagaccatctcctatccgatgtg 18333570  T
Q  394 ggactctt 401  Q
    ||| ||||    
T  18333571 ggattctt 18333578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 38731848 - 38731898
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    ||||||| | |||||||||||||| ||||||| |||||||| |||||||||    
T  38731848 gtggttgtgcctaacacaacctcacaaaatcgacttgtgaggtgaggattg 38731898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 3598572 - 3598633
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||| ||||||| || ||||||||||| | ||||||| |||||||| ||||||    
T  3598572 ccctataatattctttttagtcctcattttgagggactaaaatcaaatattctacgtattac 3598633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 4122801 - 4122740
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||| ||||  | ||||||| |||||||||||||||    
T  4122801 ccctataatattcattttagtcctcatttttagggtctaaaatcaaatattctacatattac 4122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 5933349 - 5933288
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || |||||||  || | ||||||| |||||||||||||||    
T  5933349 ccctataatattcattttagtcctcattttgaatgactaaaatcaaatattctacatattac 5933288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 6542483 - 6542422
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||| | || ||||||| ||| | ||||||| |||||||||||||||    
T  6542483 ccctataatattcattttaatcctcattttgaaggactaaaatcaaatattctacatattac 6542422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 20225118 - 20225065
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    |||||||||||  ||||||||||| || ||||||| |||||||| |||||||||    
T  20225118 atcgtggttgaacctaacacaaccccacaaaatcgacttgtgaggtgaggattg 20225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 21306964 - 21306891
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21306964 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 21314802 - 21314729
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| ||||||||||| | || || | ||||||||||| ||||||||||||  |||||| || |||||    
T  21314802 atcgtggttgggtctaacacaatcccacaataccggcttgtgaggtgaggattgcccccacttataaatacatt 21314729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 24528613 - 24528544
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  24528613 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 24528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 29991261 - 29991318
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 202  Q
    ||||||||| ||||||||||| || ||||| ||||| | ||||||| |||||||||||    
T  29991261 ccctataatattcattttagtcctcattttaagggactaaaatcaaatattctacata 29991318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 348
Target Start/End: Complemental strand, 43117959 - 43117902
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 348  Q
    ||||| |||| | |||||||||||  |||||| ||||||||||| |||||||||||||    
T  43117959 atcgttgttgggcctaacacaaccctataaaaccggcttgtgagatgaggattgccct 43117902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 8098394 - 8098338
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| |  |||||||||| || |||| ||||||||||| ||||||||||||    
T  8098394 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 8098338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 19522164 - 19522108
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| ||| || |||||| || |||| ||||||||||| ||||||||||||    
T  19522164 atcgtggttgggtcaaatacaaccccacaaaaccggcttgtgaggtgaggattgccc 19522108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 24487652 - 24487704
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||||||| |  ||||||||||||| |||| ||||||||||| ||||||||    
T  24487652 atcgtggttgggcttaacacaacctcacaaaaccggcttgtgaggtgaggatt 24487704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 33337462 - 33337518
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||  ||||||||||| || |||| ||| ||||||| ||||||||||||    
T  33337462 atcgtggttgaacctaacacaaccccacaaaaccggtttgtgagatgaggattgccc 33337518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 281 - 401
Target Start/End: Complemental strand, 6361 - 6245
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || ||||    ||| || | ||||    
T  6361 actctaagaaatcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagactatct 6266  T
Q  381 cttatccgatgtgggactctt 401  Q
    |||||| ||||||||||||||    
T  6265 cttatctgatgtgggactctt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 38447447 - 38447546
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttta 403  Q
    ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||||||||||||| ||||||| ||||||    
T  38447447 ctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatctcttatccgttgtgggattcttta 38447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 404
Target Start/End: Original strand, 22638186 - 22638295
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| |  |||||||||| || |||| ||||||||| | |||||||||||| |||||||  ||||| ||  ||  |||||||||||||||||||    
T  22638186 atcgtggttgggcttaacacaaccccacaaaaccggcttgtgtggtgaggattgcccctacttat--aaacactt--tgacaggccatctcttatccgat 22638281  T
Q  391 gtgggactctttaa 404  Q
    ||| ||||||||||    
T  22638282 gtgagactctttaa 22638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 3272879 - 3272940
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3272879 ccctataatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 3272940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 13154398 - 13154459
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  13154398 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 13154459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 15042677 - 15042783
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||||| || |||||||| ||| ||| ||| ||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  15042677 atcgtggttgagcctaacacaaccccacaaaatcggtttgcgaggtgatgattgcccccacttataaacacat----tgtcaggccatgtcgtatccgat 15042772  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  15042773 gtgggactctt 15042783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 17469895 - 17469789
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17469895 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17469800  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  17469799 gtgggactctt 17469789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 17477142 - 17477036
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  17477142 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 17477047  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  17477046 gtgggactctt 17477036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 24332421 - 24332482
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  24332421 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 24332482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 401
Target Start/End: Original strand, 24532432 - 24532534
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 394  Q
    |||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||  |||||| || ||||    ||| |||||||||| ||||||||||||    
T  24532432 tggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgtcaggccatctcctatccgatgtgg 24532527  T
Q  395 gactctt 401  Q
    |||||||    
T  24532528 gactctt 24532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 26479518 - 26479457
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  26479518 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 26479457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 31403137 - 31403076
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  31403137 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 31403076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 39052936 - 39053042
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  39052936 atcgttgttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 39053031  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  39053032 gtgggactctt 39053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 39743606 - 39743500
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||||||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  39743606 atcgtggttgggcctaacacaaccccacaaaatcggcttgtgaggtgaggattgccccaacttataaacaaat----tgtcaggccaactcctaaccgat 39743511  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  39743510 gtgggactctt 39743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 20702874 - 20702818
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||| |||||||||||||||||||| |||| |||||| |||| ||||||||||||    
T  20702874 atcgtgattgagtctaacacaacctcacaaaaccggcttatgagatgaggattgccc 20702818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 401
Target Start/End: Complemental strand, 39960279 - 39960162
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg-cccttacttatcaaaacattttatgttaggccatc 379  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||| |||  |||||| || | ||||    | ||||||||    
T  39960279 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccccccacttataaacaaattt----tcaggccatc 39960184  T
Q  380 tcttatccgatgtgggactctt 401  Q
    || |||||||||||||||||||    
T  39960183 tcctatccgatgtgggactctt 39960162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 401
Target Start/End: Complemental strand, 10450087 - 10449971
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||||| |||||||||||  | |||| |||||| |||| ||||||||||||  |||||| || ||||    ||| ||||||| |    
T  10450087 actcttagaaatcgtggttgagcctaacacaaccctacaaaaccggcttctgaggtgaggattgcccacacttataaacacat----tgtcaggccatgt 10449992  T
Q  381 cttatccgatgtgggactctt 401  Q
    | ||||||||||| |||||||    
T  10449991 cctatccgatgtgagactctt 10449971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 406
Target Start/End: Complemental strand, 8716187 - 8716080
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgg 394  Q
    |||||| ||||||||||||| || ||||||||||| |||| ||||||||||| | |||| | || ||||    ||| || |||||||||||||||| ||     
T  8716187 tggttgggtctaacacaaccccacaaaatcggcttatgaggtgaggattgccttcacttttaaacacat----tgtgagaccatctcttatccgatatga 8716092  T
Q  395 gactctttaaca 406  Q
    || |||||||||    
T  8716091 gattctttaaca 8716080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 34843194 - 34843140
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgc 345  Q
    ||||||||| |||||||||||||| || |||| ||||||||||| ||||||||||    
T  34843194 atcgtggttcagtctaacacaaccccacaaaaccggcttgtgaggtgaggattgc 34843140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 4828149 - 4828092
Alignment:
Q  287 agagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    |||||||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  4828149 agagatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 4828092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 400
Target Start/End: Original strand, 5590378 - 5590480
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | |||||||||||||| |||| ||||||||||  ||||||||||||  |||| | || ||||    ||| || ||||||| |||||||||||    
T  5590378 gtggttgggcctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttgtaaacacat----tgtcagaccatctcctatccgatgtg 5590473  T
Q  394 ggactct 400  Q
    |||||||    
T  5590474 ggactct 5590480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 18939307 - 18939360
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||| | |||||||||||||| |||||| ||||||||| ||||||||||||    
T  18939307 gtggttgggcctaacacaacctcacaaaatcagcttgtgaggtgaggattgccc 18939360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 19256593 - 19256699
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256593 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256688  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  19256689 gtgggactctt 19256699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 27993501 - 27993440
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| |||||||||| ||||    
T  27993501 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttac 27993440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 28050803 - 28050742
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| || |||||||| |||||||||||||| | ||||||| |||||||||| ||||    
T  28050803 ccctataatatttattttagttcttattttgagggactaaaatcaaatattctacatgttac 28050742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 28069364 - 28069470
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||||||||  |||||||||||  || |||||| | ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || ||||||||    
T  28069364 atcgtggttggatctaacacaactccacaaaatcagtttgtgaggtgaggattgcccccacttataaatacat----tgtcaggccatgtcatatccgat 28069459  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  28069460 gtgggactctt 28069470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 29005941 - 29005888
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    |||||||||| |||||||||||||||||||| ||||||| |||  |||||||||    
T  29005941 atcgtggttgggtctaacacaacctcataaattcggcttatgaagtgaggattg 29005888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 31186535 - 31186592
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 205  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  31186535 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatta 31186592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 31685829 - 31685890
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  31685829 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 31685890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 348
Target Start/End: Original strand, 42846612 - 42846669
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccct 348  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||||||    
T  42846612 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccct 42846669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 24075313 - 24075369
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  24075313 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 24075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 406
Target Start/End: Original strand, 30201610 - 30201642
Alignment:
Q  374 gccatctcttatccgatgtgggactctttaaca 406  Q
    |||||||||||||||||||||||||||||||||    
T  30201610 gccatctcttatccgatgtgggactctttaaca 30201642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 406
Target Start/End: Complemental strand, 4828367 - 4828259
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| | |||| ||| || ||||||||    
T  4828367 gtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcatgccaactcctaaccgatgtg 4828272  T
Q  394 ggactctttaaca 406  Q
    |||||||||||||    
T  4828271 ggactctttaaca 4828259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 404
Target Start/End: Complemental strand, 37001303 - 37001194
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  || |||  ||||| ||  ||| |||||||||||  | ||||    
T  37001303 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacctat--aaacactt--tgtgaggccatctctcgttcgat 37001208  T
Q  391 gtgggactctttaa 404  Q
    ||||||||||||||    
T  37001207 gtgggactctttaa 37001194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 11232204 - 11232307
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  11232204 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 11232299  T
Q  394 ggactctt 401  Q
    ||||||||    
T  11232300 ggactctt 11232307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 3157569 - 3157622
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||||| ||||||||||| || ||||  |||||||||| ||||||||||||    
T  3157569 gtggttgagcctaacacaaccccacaaaactggcttgtgaggtgaggattgccc 3157622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 6891937 - 6891998
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| || |||||||| || ||||||||||| | |||| || |||||||||||||||    
T  6891937 ccctataatatttattttagtcctcattttgagggactaaaattaaatattctacatattac 6891998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 6943816 - 6943877
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| ||||||| |||||||    
T  6943816 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctatatattac 6943877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 407
Target Start/End: Original strand, 8466810 - 8466843
Alignment:
Q  374 gccatctcttatccgatgtgggactctttaacag 407  Q
    |||||||||||||||||||| |||||||||||||    
T  8466810 gccatctcttatccgatgtgagactctttaacag 8466843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 12688149 - 12688076
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||| |||||||||||| |||  || |||| ||||||||||| || |||||||||| |||||| || |||||    
T  12688149 atcgtgtttgagtctaacataactccacaaaaccggcttgtgaggtggggattgccctcacttataaacacatt 12688076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 19256827 - 19256933
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  19256827 atcgtggttgggcctaacacaaccccacaaaacctgcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 19256922  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  19256923 gtgggactctt 19256933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 20301338 - 20301265
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  20301338 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 20301265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 21087970 - 21087897
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | |||||||||||||| ||||  |||||||||| | ||||||||||  |||||| || |||||    
T  21087970 atcgtggttgggcctaacacaacctcacaaaacgggcttgtgaggttaggattgcccccacttataaacacatt 21087897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 27205246 - 27205181
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||| ||| |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205246 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 406
Target Start/End: Original strand, 29907815 - 29907844
Alignment:
Q  377 atctcttatccgatgtgggactctttaaca 406  Q
    ||||||||||||||||||||||||||||||    
T  29907815 atctcttatccgatgtgggactctttaaca 29907844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 35682788 - 35682861
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| | ||||||||||| || |||| ||||||| ||| ||||||||||||  |||||| || |||||    
T  35682788 atcgtggttgggcctaacacaaccccacaaaaccggcttgcgaggtgaggattgcccccacttataaacacatt 35682861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 9180204 - 9180264
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 205  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||| |||||    
T  9180204 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacgtatta 9180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 10614946 - 10614998
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggatt 343  Q
    |||||||||||| |||| |||||| || |||||||||||||||| ||| ||||    
T  10614946 atcgtggttgagcctaatacaaccccacaaaatcggcttgtgaggtgaagatt 10614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 10884141 - 10884086
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  10884141 atcgtggttgggcctaacacaacc-cacaaaaccggcttgtgaggtgaggattgccc 10884086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 15686047 - 15686095
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgag 339  Q
    |||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  15686047 atcgtggttgagtctaacacaatcccacaaaaccggcttgtgaggtgag 15686095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 27205041 - 27204985
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205041 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27204985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 27205139 - 27205083
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| |||||| |||| ||||||||||||    
T  27205139 atcgtggttgggcctaacacaaccccacaaaaccggcttatgaggtgaggattgccc 27205083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 406
Target Start/End: Original strand, 44118878 - 44118977
Alignment:
Q  303 tctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactcttt 402  Q
    |||||||||||| || ||||  |||||||||| |||||||| |||  |||||| || |||||    || |||||||||||||||||||||||||||||||    
T  44118878 tctaacacaaccccacaaaacgggcttgtgaggtgaggattacccccacttataaacacatt----gtcaggccatctcttatccgatgtgggactcttt 44118973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 35788736 - 35788630
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||| |||    
T  35788736 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatctgat 35788641  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  35788640 gtgggactctt 35788630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 282 - 401
Target Start/End: Complemental strand, 35788980 - 35788865
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctc 381  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| |     
T  35788980 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcaggccatgtt 35788885  T
Q  382 ttatccgatgtgggactctt 401  Q
     |||||||||||||||||||    
T  35788884 ctatccgatgtgggactctt 35788865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 989299 - 989238
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  989299 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 989238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 11021832 - 11021893
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  11021832 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 11021893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 17107591 - 17107652
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  17107591 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 17107652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 22487379 - 22487440
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  22487379 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 22487440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 22827615 - 22827509
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | |||||||||||  | |||| ||||||||||| ||||||||||||  |||||| || || |    ||| |||||||||| ||||||||    
T  22827615 atcgtggttgggcctaacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacgt----tgtcaggccatctcctatccgat 22827520  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  22827519 gtgggactctt 22827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 46481076 - 46481137
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  46481076 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 46481137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 9685709 - 9685653
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  9685709 atcgtggttgggcctaacacaaccccataaaaccggcttgtgaggtgaggattgccc 9685653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 12005476 - 12005532
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  12005476 atcgttgttgggtctaacacaacctcacaaaaccggcttgtgaggtgaggattgccc 12005532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 13683163 - 13683223
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 205  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  13683163 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatta 13683223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 22845444 - 22845560
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| |||||||| |||  |||||| || ||||    ||| ||||||| |    
T  22845444 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattacccccacttataaacacat----tgtcaggccatgt 22845539  T
Q  381 cttatccgatgtgggactctt 401  Q
    | |||| ||||||||||||||    
T  22845540 catatctgatgtgggactctt 22845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 46081598 - 46081539
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatt 204  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||    
T  46081598 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatatt 46081539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 401
Target Start/End: Original strand, 39902573 - 39902676
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| | ||||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||    
T  39902573 gtggttgggcctaacacaaccccacaaaaccagcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtg 39902668  T
Q  394 ggactctt 401  Q
    ||||||||    
T  39902669 ggactctt 39902676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 302 - 406
Target Start/End: Complemental strand, 53699093 - 53698993
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    ||||||||||||| |||||| |||| ||||||| ||||||||||||  ||||||  |||||| |  ||| ||  |||||||||| || ||||||||||||    
T  53699093 gtctaacacaaccccataaagtcggtttgtgaggtgaggattgcccacacttat--aaacatat--tgtcagatcatctcttattcgttgtgggactctt 53698998  T
Q  402 taaca 406  Q
    |||||    
T  53698997 taaca 53698993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 5721111 - 5721172
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  5721111 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattac 5721172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 6218516 - 6218410
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| |||||||||   ||||||| ||||||||||| ||| ||||||||  |||||| || ||||    ||||||| |||||| |||| |||    
T  6218516 atcgtggttgagcctaacacaattccataaaaccggcttgtgaggtgatgattgcccccacttataaacacat----tgttaggtcatctcctatctgat 6218421  T
Q  391 gtgggactctt 401  Q
    ||| |||||||    
T  6218420 gtgagactctt 6218410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 13493108 - 13493047
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||||| |||| |||| || ||||||||||| | ||||||| |||||||||||||||    
T  13493108 ccctataatgtacattgtagtcctcattttgagggactaaaatcaaatattctacatattac 13493047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 16491806 - 16491867
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| || ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  16491806 ccctatgatattcattttagtcctcattttgagggattaaaatcaaatattctacatattac 16491867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 16959988 - 16959927
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  16959988 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 16959927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 17865135 - 17865196
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  17865135 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 17865196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 21498872 - 21498766
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498872 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498777  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  21498776 gtgggactctt 21498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 28245533 - 28245639
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | ||||||||    
T  28245533 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgat 28245628  T
Q  391 gtgggactctt 401  Q
    ||| |||||||    
T  28245629 gtgagactctt 28245639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 37815500 - 37815561
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  37815500 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 37815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 39385385 - 39385324
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  39385385 ccctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 39385324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 43750106 - 43750167
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | |||| || |||||||||||||||    
T  43750106 ccctataatattcattttagtcctcattttgagggactaaaataaaatattctacatattac 43750167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 50543574 - 50543680
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  ||||||  | ||||    ||| |||||||| | ||||||||    
T  50543574 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttatacacacat----tgtcaggccatcacctatccgat 50543669  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  50543670 gtgggactctt 50543680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 1518241 - 1518185
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||  | ||||||||||| || |||| ||||||||||||||||||||||||    
T  1518241 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgagctgaggattgccc 1518185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 22231315 - 22231371
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  22231315 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 22231371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 406
Target Start/End: Original strand, 27464272 - 27464366
Alignment:
Q  308 cacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctttaaca 406  Q
    ||||||| || |||| ||||||||||| |||||||||||   ||||||  ||||| |||  || |||  ||||||||||||||||||||||||||||||    
T  27464272 cacaaccccacaaaaccggcttgtgaggtgaggattgcctccacttat--aaacacttt--gtcaggaaatctcttatccgatgtgggactctttaaca 27464366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 53559297 - 53559353
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || ||||||||||||| || ||||||||||||    
T  53559297 atcgtggttgggcctaacacaaccccacaaaatcggcttgtaaggtgaggattgccc 53559353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 12792794 - 12792735
Alignment:
Q  147 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||| ||||    
T  12792794 ctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatgttac 12792735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 20045963 - 20046022
Alignment:
Q  147 ctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||| ||||||||||| || ||||||| ||| | ||||||| |||||||||||||||    
T  20045963 ctataatattcattttagtcctcattttgaaggactaaaatcaaatattctacatattac 20046022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 35796763 - 35796822
Alignment:
Q  305 taacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||  |||||| || |||||    
T  35796763 taacacaacctcacaaaaccggcttgtgaggtgaggattgcccccacttataaacacatt 35796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 400575 - 400645
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||  ||||||||||||| |||| ||||||||||| |||||||| |||  |||||| || |||||    
T  400575 gtggttgagcttaacacaacctcacaaaaccggcttgtgaggtgaggatttcccccacttataaacacatt 400645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 5398221 - 5398275
Alignment:
Q  293 cgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  5398221 cgtggttgggcctaacacaaccccacaaaaccggcttgtgagatgaggattgccc 5398275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 282 - 364
Target Start/End: Complemental strand, 22863560 - 22863478
Alignment:
Q  282 ctctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||| ||| |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||  |||||| || |||||    
T  22863560 ctcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgcccccacttataaacacatt 22863478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 26314696 - 26314642
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 202  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||    
T  26314696 tataatattcattttagttctcattttgagggactaaaatcaaatattctacata 26314642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 406
Target Start/End: Original strand, 28208414 - 28208452
Alignment:
Q  368 tgttaggccatctcttatccgatgtgggactctttaaca 406  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28208414 tgttagaccatctcttatccaatgtgggactctttaaca 28208452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 32592964 - 32592906
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| ||||||| |||||||    
T  32592964 tataatattcattttagtcctcattttgagggactaaaatcaaatattctatatattac 32592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 9685475 - 9685422
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    |||||||||| | |||||||||||||| |||| || |||||||| |||||||||    
T  9685475 atcgtggttgggcctaacacaacctcacaaaaccgacttgtgaggtgaggattg 9685422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 21498431 - 21498325
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | |||||| |||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  21498431 atcgtggttgggcctaacataaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 21498336  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  21498335 gtgggactctt 21498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 27634116 - 27634194
Alignment:
Q  319 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    |||||||| ||||||| ||||||||||||  |||||| || ||||    ||| ||||||| || |||||||||||||||||||    
T  27634116 aaaatcggtttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctatccgatgtgggactctt 27634194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Original strand, 53828533 - 53828586
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||| | ||||||||||| || ||||||||||| |||| ||||||||||||    
T  53828533 gtggttgggcctaacacaaccccacaaaatcggcttatgaggtgaggattgccc 53828586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 5846223 - 5846167
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||| ||||| ||||| || |||| |||||| |||| ||||||||||||    
T  5846223 atcgtggttgagcctaacgcaaccccacaaaaccggcttatgaggtgaggattgccc 5846167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 11036766 - 11036826
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    ||||||||||| || | |||||||||||||| ||||||||||||  |||||| || |||||    
T  11036766 ctaacacaaccccacacaatcggcttgtgaggtgaggattgcccccacttataaacacatt 11036826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 14783194 - 14783250
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  14783194 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 14783250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 30529937 - 30529981
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgag 339  Q
    |||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  30529937 tggttgagcctaacacaatctcataaaaccggcttgtgaggtgag 30529981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 35819135 - 35819191
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | |||||||||||||| ||||  ||||||||||  |||||||||||    
T  35819135 atcgtggttgggcctaacacaacctcacaaaactggcttgtgaggcgaggattgccc 35819191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 37836144 - 37836051
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    ||||||||||| || |||| |||||||| ||  |||||||||||  |||||| || |||||    |||||||||| || | |||||||||||||||||    
T  37836144 ctaacacaaccccacaaaaccggcttgtaaggagaggattgcccccacttataaatacatt----gttaggccatgtcctgtccgatgtgggactctt 37836051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 50543337 - 50543393
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||| | ||||||||||||    
T  50543337 atcgtggttgggcctaacacaaccccacaaaaccggcttgtggggtgaggattgccc 50543393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 17457942 - 17457881
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  17457942 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 17457881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 18369237 - 18369176
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  18369237 ccctataatattcattttagtccttattttgagggactaaaatcaaatattctacatattac 18369176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 401
Target Start/End: Complemental strand, 16419589 - 16419473
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || |||| |    
T  16419589 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcagaccatgt 16419494  T
Q  381 cttatccgatgtgggactctt 401  Q
    | |||||||||||||||||||    
T  16419493 cctatccgatgtgggactctt 16419473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 401
Target Start/End: Original strand, 40379206 - 40379322
Alignment:
Q  281 actctgagagatcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatct 380  Q
    ||||| ||| |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| ||||||||     
T  40379206 actcttagaaatcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatca 40379301  T
Q  381 cttatccgatgtgggactctt 401  Q
    | |||||||||||||||||||    
T  40379302 cctatccgatgtgggactctt 40379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 3371461 - 3371522
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  3371461 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 3371522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 12806708 - 12806769
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  12806708 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 12806769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 40379451 - 40379557
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || |||     ||| |||||||| | ||||||||    
T  40379451 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaca----ctgtcaggccatcacctatccgat 40379546  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  40379547 gtgggactctt 40379557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 41594175 - 41594114
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  41594175 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 41594114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 42705111 - 42705172
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  42705111 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 42705172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 2324551 - 2324495
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324551 atcgtggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 7877559 - 7877487
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| ||||||||||| || |||||||| || ||||||||||| | ||||||| ||||| |||||||||    
T  7877559 ttgaaattgaaccctataatatttattttagtcctcattttgagggactaaaatcaaatattcaacatattac 7877487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 355
Target Start/End: Original strand, 17854936 - 17855000
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||| ||||| ||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  17854936 atcgtggttgggtctagcacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 17855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 342
Target Start/End: Original strand, 27897513 - 27897561
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggat 342  Q
    ||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  27897513 gtggttgagcctaacacaacctcataaaaccggcttgtgaggtgaggat 27897561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 37609179 - 37609119
Alignment:
Q  146 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  37609179 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 37609119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 13572633 - 13572691
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  13572633 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 13572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 30432816 - 30432758
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  30432816 tataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 30432758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 4171684 - 4171745
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || |||||||| || | ||||||| |||||||||||||||    
T  4171684 ccctataatattcattttagtcctcattttgagagactaaaatcaaatattctacatattac 4171745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 5711446 - 5711552
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | ||||||    
T  5711446 atcgtggttgggcctaacacaaccccacaaaaccggcttgttaggtgaggattgcccccacttataaacacat----tgtcaggccatttcctttccgat 5711541  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  5711542 gtgggactctt 5711552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 14379337 - 14379276
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  14379337 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 14379276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 19204751 - 19204812
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| |||||| |||| || ||||||||||| | ||||||| |||||||||||||||    
T  19204751 ccctataatattcattctagtcctcattttgagggactaaaatcaaatattctacatattac 19204812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 29683333 - 29683394
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||| ||||||||||    
T  29683333 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattttacatattac 29683394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 33606089 - 33606167
Alignment:
Q  319 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    |||| ||| ||||||| |||||||||||| ||||||| || |||||||     |||||||||| |||||||||||||||||||    
T  33606089 aaaaccggtttgtgaggtgaggattgcccctacttataaacacattttc----aggccatctcctatccgatgtgggactctt 33606167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 33940901 - 33940844
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacata 202  Q
    ||||||||| |||||||||||  ||||||||||||| | ||||||| |||||||||||    
T  33940901 ccctataatattcattttagtctttattttgagggactaaaatcaaatattctacata 33940844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 2324317 - 2324261
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||||||||||||    
T  2324317 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 2324261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 2395305 - 2395377
Alignment:
Q  134 ttgaaatttaaccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| | | ||||||| ||||||||||  || ||||||||||| | ||||||| |||||||||||||||    
T  2395305 ttgaaattgatctctataatattcattttagccctcattttgagggactaaaatcaaatattctacatattac 2395377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 6880193 - 6880137
Alignment:
Q  149 ataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatatta 205  Q
    ||||| ||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  6880193 ataatattcattttagtcctcattttgagggattaaaatcaaatattctacatatta 6880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 15124555 - 15124611
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| ||||||||||||| || ||||||||||| |||| || |||||||||    
T  15124555 atcgtggttgggtctaacacaaccccacaaaatcggcttatgaggtggggattgccc 15124611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 355
Target Start/End: Complemental strand, 29718405 - 29718341
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttat 355  Q
    |||||||||  | ||||||||||| || |||| ||||||||||| ||||||||||||| ||||||    
T  29718405 atcgtggttaggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccctcacttat 29718341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 406
Target Start/End: Complemental strand, 10523250 - 10523219
Alignment:
Q  375 ccatctcttatccgatgtgggactctttaaca 406  Q
    ||||||||||||||||||||||||||||||||    
T  10523250 ccatctcttatccgatgtgggactctttaaca 10523219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 403
Target Start/End: Complemental strand, 14927179 - 14927071
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||||| ||||||||||| || |||   | ||| |||| ||||||||||||  |||||| || |||||    || ||| |||||||||||||||    
T  14927179 atcgtggttgagcctaacacaaccacacaaagctgacttatgaggtgaggattgcccccacttataaacacatt----gtcaggtcatctcttatccgat 14927084  T
Q  391 gtgggactcttta 403  Q
    ||| |||||||||    
T  14927083 gtgtgactcttta 14927071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 6164119 - 6164061
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  6164119 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 6164061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 16533613 - 16533551
Alignment:
Q  302 gtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||||||||| |||| ||||||||||  ||||||||||||  |||||| || |||||    
T  16533613 gtctaacacaacctcacaaaaccggcttgtgaagtgaggattgcccccacttataaacacatt 16533551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 306 - 401
Target Start/End: Complemental strand, 17719462 - 17719371
Alignment:
Q  306 aacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    |||||||||  | |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| |||||||| | |||||||||||||||||||    
T  17719462 aacacaacccgacaaaaccggcttgtgaggtgaggattgcccccacttataaacacat----tgtcaggccatcacctatccgatgtgggactctt 17719371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 28921355 - 28921413
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  28921355 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 28921413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 344
Target Start/End: Original strand, 19191617 - 19191670
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| |||||||||    
T  19191617 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattg 19191670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 28407800 - 28407906
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||  || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||||||||||  || || |||||    
T  28407800 atcgtggttgggcctaacacaactccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgttaggccaattcctaaccgat 28407895  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  28407896 gtgggactctt 28407906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 401
Target Start/End: Complemental strand, 32884184 - 32884078
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    ||||| |||| | ||||||||||| || |||| ||||||||||| ||||||||||||  |||||| || | ||    ||| |||||| ||| || |||||    
T  32884184 atcgtagttgggcctaacacaaccccacaaaaccggcttgtgaggtgaggattgcccccacttataaacaaat----tgtcaggccaactcctaaccgat 32884089  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  32884088 gtgggactctt 32884078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 401
Target Start/End: Original strand, 37812533 - 37812611
Alignment:
Q  319 aaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtgggactctt 401  Q
    ||||||| |||||||| ||||||||||||  |||||| || ||||    ||| ||| ||| ||||||||||||||||||||||    
T  37812533 aaaatcgacttgtgaggtgaggattgcccccacttataaacacat----tgtcaggtcatgtcttatccgatgtgggactctt 37812611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Original strand, 37769950 - 37770006
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| ||||||||||||| || |||| |||||| |||| ||| ||||||||    
T  37769950 atcgtggttgggtctaacacaaccccacaaaaccggcttatgaggtgaagattgccc 37770006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 40149023 - 40149063
Alignment:
Q  304 ctaacacaacctcataaaatcggcttgtgagctgaggattg 344  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  40149023 ctaacacaaccccacaaaatcggcttgtgaggtgaggattg 40149063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 4611 - 4550
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  4611 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 4550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 43501 - 43440
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  43501 ccctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 43440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 212635 - 212575
Alignment:
Q  146 cctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||||| ||||||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  212635 cctataatattcattttagtcctcattttgagggactaaaatcaaatattctacatattac 212575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 291 - 401
Target Start/End: Original strand, 5761 - 5867
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgat 390  Q
    |||||||||| | ||||||||||| |  |||| ||||||||||| ||||||||||||  |||||| || ||||    ||| || | || |||||||||||    
T  5761 atcgtggttgggcctaacacaaccccgcaaaaccggcttgtgagatgaggattgcccccacttataaacacat----tgtcagactatgtcttatccgat 5856  T
Q  391 gtgggactctt 401  Q
    |||||||||||    
T  5857 gtgggactctt 5867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 36989 - 36928
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  36989 ccctataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 347
Target Start/End: Original strand, 4440 - 4492
Alignment:
Q  295 tggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  4440 tggttgagcctaacacaaccccacaaaaccggcttgtgaggtgaggattgccc 4492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 401
Target Start/End: Complemental strand, 2225 - 2122
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacattttatgttaggccatctcttatccgatgtg 393  Q
    ||||||| | ||||||||||| || |||| |||||||| || ||||||||||||  |||||| || ||||    ||| ||||||| || | |||||||||    
T  2225 gtggttgggcctaacacaaccccacaaaaccggcttgtaaggtgaggattgcccccacttataaacacat----tgtcaggccatgtcctgtccgatgtg 2130  T
Q  394 ggactctt 401  Q
    ||||||||    
T  2129 ggactctt 2122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 36215 - 36157
Alignment:
Q  148 tataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    |||||| ||||||||||| ||  |||||||||| | ||||||| |||||||||||||||    
T  36215 tataatattcattttagtcctcgttttgagggactaaaatcaaatattctacatattac 36157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 8766 - 8705
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||| ||| ||||||||| | || ||||||||||| | ||||||| |||||||||||||||    
T  8766 ccctaaaatattcattttaatcctcattttgagggactaaaatcaaatattctacatattac 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 364
Target Start/End: Complemental strand, 5732 - 5659
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgcccttacttatcaaaacatt 364  Q
    |||||||||| ||||||||||||| || |||| |||||||| || |||||||| |||  |||||| || |||||    
T  5732 atcgtggttgggtctaacacaaccccacaaaaccggcttgtaagatgaggattacccccacttataaacacatt 5659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 347
Target Start/End: Complemental strand, 12721 - 12668
Alignment:
Q  294 gtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    ||||||| | ||||||||||| || ||||||| |||||||| ||||||||||||    
T  12721 gtggttgggcctaacacaaccacacaaaatcgacttgtgaggtgaggattgccc 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 118187 - 118247
Alignment:
Q  145 ccctataatgttcattttagtacttattttgagggagtgaaatcaagtattctacatattac 206  Q
    ||||||||| || |||||||| || ||||||||||| | ||||||| |||||||||||||||    
T  118187 ccctataatatttattttagtcctcattttgagggact-aaatcaaatattctacatattac 118247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 347
Target Start/End: Complemental strand, 56536 - 56480
Alignment:
Q  291 atcgtggttgagtctaacacaacctcataaaatcggcttgtgagctgaggattgccc 347  Q
    |||||||||| | ||||||||||| || |||| ||||||||||| ||| ||||||||    
T  56536 atcgtggttgggcctaacacaaccccacaaaaccggcttgtgaggtgatgattgccc 56480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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