View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6308_high_10 (Length: 249)
Name: NF6308_high_10
Description: NF6308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6308_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 44345197 - 44345427
Alignment:
| Q |
1 |
ttgtcattctacatattataaaatgattataacaatacgccttattttactattagtatttctttcactctcaacaaatactagccaaattgtatatgca |
100 |
Q |
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| T |
44345197 |
ttgtcattctacatattataaaatgattataacaatacgccttattttactattagtatttctttcactctcaacaaatactagccaaattgtatatgca |
44345296 |
T |
|
| Q |
101 |
aaaggaaacaacaacaataatgttaaggaagcttgcagtgtcacaaggtaccaaaacctttgcatccacacactggcacaattctccaacacagcaggaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
44345297 |
aaaggaaacaacaacaataatgttaaggaagcttgcagtgtcacaaggtaccaaaacctttgcatccacacactagcacaattctccaacacagcaggaa |
44345396 |
T |
|
| Q |
201 |
gaaccccaagcaaatgggcacgtgcgggtgt |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
44345397 |
gaaccccaagcaaatgggcacgtgcgggtgt |
44345427 |
T |
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