View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6308_high_11 (Length: 246)
Name: NF6308_high_11
Description: NF6308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6308_high_11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 52065610 - 52065838
Alignment:
| Q |
18 |
gttcctgtacttgttggtgagctccaaacgaggtcccaatacctacatcaaaggttgccatgcaaacacatatttataaaatttcaacttttttattgca |
117 |
Q |
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| T |
52065610 |
gttcctgtacttgttggtgagctccaaacgaggtcccaatacctacatcaaaggttgccatgcaaacacatatttataaaatttcaacttttttattgca |
52065709 |
T |
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| Q |
118 |
caaaagttactatttgatttgtaaaaacaactaaataaaactttgcaaggtataccctctattagattcttcattcaacacttcaagcaaattgtcaatg |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52065710 |
taaaagttactatttgatttgtaaaaacaactaaataaaactttgcaaggtataccctctattagattcttcattcaacacttcaagcaaattgtcaatg |
52065809 |
T |
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| Q |
218 |
tcactatactgtattccagtgacaattcc |
246 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
52065810 |
tcactatactgtattccagtgacaattcc |
52065838 |
T |
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