View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6308_high_13 (Length: 237)

Name: NF6308_high_13
Description: NF6308
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6308_high_13
NF6308_high_13
[»] chr6 (31 HSPs)
chr6 (1-221)||(34040623-34040854)
chr6 (111-164)||(2500524-2500577)
chr6 (111-164)||(32837349-32837402)
chr6 (118-164)||(4661103-4661149)
chr6 (126-163)||(27218892-27218929)
chr6 (118-164)||(24784202-24784248)
chr6 (111-164)||(3294771-3294824)
chr6 (111-164)||(4408365-4408418)
chr6 (111-164)||(7581051-7581104)
chr6 (111-164)||(9372211-9372264)
chr6 (111-164)||(9435633-9435686)
chr6 (111-164)||(19892286-19892339)
chr6 (111-164)||(22997343-22997396)
chr6 (111-164)||(23791005-23791058)
chr6 (111-164)||(33697123-33697176)
chr6 (128-164)||(607194-607230)
chr6 (111-163)||(2426072-2426124)
chr6 (128-164)||(3794200-3794236)
chr6 (111-163)||(6210062-6210114)
chr6 (128-164)||(7207851-7207887)
chr6 (128-164)||(7545336-7545372)
chr6 (128-164)||(7865382-7865418)
chr6 (128-164)||(8439682-8439718)
chr6 (128-164)||(9246409-9246445)
chr6 (128-164)||(10934606-10934642)
chr6 (128-164)||(15091455-15091491)
chr6 (128-164)||(17441866-17441902)
chr6 (128-164)||(19953855-19953891)
chr6 (128-164)||(28030871-28030907)
chr6 (128-164)||(32611581-32611617)
chr6 (128-164)||(33573824-33573860)
[»] scaffold0025 (1 HSPs)
scaffold0025 (111-164)||(65797-65850)
[»] chr8 (51 HSPs)
chr8 (111-164)||(8698590-8698643)
chr8 (111-164)||(16449132-16449185)
chr8 (111-164)||(39362272-39362325)
chr8 (111-164)||(43656043-43656096)
chr8 (128-164)||(133422-133458)
chr8 (128-164)||(2792786-2792822)
chr8 (128-164)||(23435260-23435296)
chr8 (128-164)||(26567275-26567311)
chr8 (128-164)||(37290929-37290965)
chr8 (111-162)||(10573110-10573161)
chr8 (111-150)||(11850670-11850709)
chr8 (118-164)||(197081-197127)
chr8 (118-164)||(311918-311964)
chr8 (122-164)||(4654131-4654173)
chr8 (111-164)||(20540116-20540169)
chr8 (111-164)||(23858204-23858257)
chr8 (111-164)||(24296878-24296931)
chr8 (111-164)||(27077107-27077160)
chr8 (111-164)||(32719618-32719670)
chr8 (60-109)||(33297957-33298006)
chr8 (111-164)||(34266019-34266072)
chr8 (128-164)||(12252-12288)
chr8 (128-164)||(94538-94574)
chr8 (59-103)||(1632386-1632430)
chr8 (128-164)||(1937317-1937353)
chr8 (128-164)||(2787108-2787144)
chr8 (128-164)||(5328594-5328630)
chr8 (128-164)||(8265275-8265311)
chr8 (128-164)||(8862153-8862189)
chr8 (128-164)||(10587304-10587340)
chr8 (128-164)||(10736901-10736937)
chr8 (128-164)||(11875893-11875929)
chr8 (128-164)||(11890900-11890936)
chr8 (128-164)||(17027907-17027943)
chr8 (128-164)||(17558343-17558379)
chr8 (128-164)||(17698529-17698565)
chr8 (118-162)||(22487884-22487928)
chr8 (128-164)||(23178918-23178954)
chr8 (111-155)||(24790334-24790378)
chr8 (128-164)||(26022254-26022290)
chr8 (128-164)||(29716867-29716903)
chr8 (128-164)||(30972844-30972880)
chr8 (128-164)||(34158684-34158720)
chr8 (128-164)||(34413069-34413105)
chr8 (128-164)||(34894376-34894412)
chr8 (128-164)||(35939494-35939530)
chr8 (128-164)||(40740532-40740568)
chr8 (128-164)||(41689889-41689925)
chr8 (128-164)||(42006785-42006821)
chr8 (59-103)||(43085169-43085213)
chr8 (111-155)||(43403308-43403352)
[»] chr7 (47 HSPs)
chr7 (113-162)||(25672410-25672459)
chr7 (127-164)||(19922122-19922159)
chr7 (111-164)||(47641052-47641105)
chr7 (111-163)||(2846070-2846122)
chr7 (128-163)||(10650-10685)
chr7 (111-162)||(27633940-27633991)
chr7 (111-162)||(30806124-30806175)
chr7 (122-164)||(5804862-5804904)
chr7 (126-164)||(10244914-10244952)
chr7 (111-161)||(10690857-10690907)
chr7 (118-164)||(12615758-12615804)
chr7 (118-164)||(21402845-21402891)
chr7 (126-164)||(24732576-24732614)
chr7 (126-164)||(37300124-37300162)
chr7 (114-164)||(46495096-46495146)
chr7 (126-164)||(47999787-47999825)
chr7 (111-164)||(3392474-3392527)
chr7 (128-161)||(15074929-15074962)
chr7 (111-164)||(25833562-25833615)
chr7 (111-164)||(28735735-28735788)
chr7 (111-164)||(41084046-41084099)
chr7 (128-164)||(2228982-2229018)
chr7 (128-164)||(2681103-2681139)
chr7 (128-164)||(9877294-9877330)
chr7 (128-164)||(12640616-12640652)
chr7 (128-164)||(12772122-12772158)
chr7 (128-164)||(13730124-13730160)
chr7 (128-164)||(15238896-15238932)
chr7 (124-164)||(18223740-18223780)
chr7 (128-164)||(19752995-19753031)
chr7 (126-162)||(21066895-21066931)
chr7 (128-164)||(23102585-23102621)
chr7 (128-164)||(24781037-24781073)
chr7 (128-164)||(27510284-27510320)
chr7 (128-164)||(29617412-29617448)
chr7 (128-164)||(30388534-30388570)
chr7 (128-164)||(32676969-32677005)
chr7 (111-163)||(32856927-32856979)
chr7 (128-164)||(35950135-35950171)
chr7 (128-164)||(36174397-36174433)
chr7 (128-164)||(36391931-36391967)
chr7 (128-164)||(38824652-38824688)
chr7 (128-164)||(41465841-41465877)
chr7 (126-162)||(42433117-42433153)
chr7 (128-164)||(42443696-42443732)
chr7 (128-164)||(44616609-44616645)
chr7 (128-164)||(46534775-46534811)
[»] chr5 (38 HSPs)
chr5 (111-164)||(11146539-11146592)
chr5 (111-164)||(42885836-42885889)
chr5 (111-162)||(40361589-40361640)
chr5 (111-153)||(36735889-36735931)
chr5 (111-164)||(8241057-8241110)
chr5 (111-164)||(35112972-35113025)
chr5 (128-164)||(2328599-2328635)
chr5 (128-164)||(39919120-39919156)
chr5 (126-164)||(1729489-1729527)
chr5 (126-164)||(12891564-12891602)
chr5 (111-164)||(2362976-2363029)
chr5 (111-164)||(15241403-15241456)
chr5 (111-148)||(16745104-16745141)
chr5 (130-163)||(32392155-32392188)
chr5 (111-164)||(36124406-36124459)
chr5 (111-164)||(42320324-42320377)
chr5 (128-164)||(1743134-1743170)
chr5 (111-155)||(4153563-4153607)
chr5 (128-164)||(4417712-4417748)
chr5 (128-164)||(4745903-4745939)
chr5 (128-164)||(6518803-6518839)
chr5 (128-164)||(8968756-8968792)
chr5 (128-164)||(9835040-9835076)
chr5 (128-164)||(9958584-9958620)
chr5 (128-164)||(11188709-11188745)
chr5 (128-164)||(11897255-11897291)
chr5 (128-164)||(12463763-12463799)
chr5 (122-154)||(12680371-12680403)
chr5 (128-164)||(16386768-16386804)
chr5 (128-164)||(16603405-16603441)
chr5 (128-164)||(17545199-17545235)
chr5 (128-164)||(21918059-21918095)
chr5 (128-164)||(25472610-25472646)
chr5 (128-164)||(27765264-27765300)
chr5 (128-164)||(32505695-32505731)
chr5 (128-164)||(35515519-35515555)
chr5 (128-164)||(41156335-41156371)
chr5 (128-164)||(41179830-41179866)
[»] chr4 (58 HSPs)
chr4 (111-164)||(481555-481608)
chr4 (111-164)||(27103111-27103164)
chr4 (111-155)||(54103574-54103618)
chr4 (126-164)||(42395234-42395272)
chr4 (111-164)||(25235807-25235860)
chr4 (111-164)||(39697872-39697925)
chr4 (111-164)||(40051629-40051682)
chr4 (111-164)||(40994113-40994166)
chr4 (128-164)||(1458045-1458081)
chr4 (128-164)||(3815067-3815103)
chr4 (128-164)||(4234312-4234348)
chr4 (128-164)||(11375916-11375952)
chr4 (128-164)||(55238526-55238562)
chr4 (111-162)||(7272526-7272577)
chr4 (126-164)||(33530800-33530838)
chr4 (126-164)||(39696362-39696400)
chr4 (111-164)||(542824-542877)
chr4 (111-164)||(921489-921542)
chr4 (119-164)||(18002331-18002376)
chr4 (111-164)||(30217606-30217659)
chr4 (111-164)||(31852623-31852676)
chr4 (111-164)||(37935868-37935921)
chr4 (111-164)||(39023182-39023235)
chr4 (111-164)||(43978015-43978068)
chr4 (111-164)||(45849054-45849107)
chr4 (111-164)||(48569186-48569239)
chr4 (128-164)||(3847688-3847724)
chr4 (128-164)||(4105734-4105770)
chr4 (128-164)||(6371121-6371157)
chr4 (111-163)||(8144601-8144653)
chr4 (128-164)||(8965101-8965137)
chr4 (111-155)||(9661566-9661610)
chr4 (111-155)||(10042428-10042472)
chr4 (128-164)||(21935484-21935520)
chr4 (60-100)||(22230381-22230421)
chr4 (128-164)||(22230461-22230497)
chr4 (128-164)||(22788701-22788737)
chr4 (128-164)||(24680113-24680149)
chr4 (129-165)||(25726337-25726373)
chr4 (128-164)||(26868356-26868392)
chr4 (128-164)||(26919495-26919531)
chr4 (129-157)||(29520248-29520276)
chr4 (128-164)||(34353786-34353822)
chr4 (128-164)||(35207178-35207214)
chr4 (59-103)||(36132309-36132353)
chr4 (111-163)||(42218758-42218810)
chr4 (111-163)||(42381123-42381175)
chr4 (128-164)||(43147411-43147447)
chr4 (128-164)||(43207676-43207712)
chr4 (128-164)||(43271744-43271780)
chr4 (128-164)||(43596902-43596938)
chr4 (128-164)||(46105542-46105578)
chr4 (128-164)||(46775057-46775093)
chr4 (128-164)||(49901489-49901525)
chr4 (111-155)||(52699205-52699249)
chr4 (128-164)||(53572354-53572390)
chr4 (128-164)||(54443907-54443943)
chr4 (128-164)||(55251378-55251414)
[»] chr3 (50 HSPs)
chr3 (111-173)||(49750416-49750479)
chr3 (111-164)||(31586954-31587007)
chr3 (128-164)||(48251579-48251615)
chr3 (128-164)||(54769857-54769893)
chr3 (122-164)||(17218495-17218537)
chr3 (126-164)||(17602701-17602739)
chr3 (126-164)||(25279084-25279122)
chr3 (126-164)||(53163601-53163639)
chr3 (111-164)||(2368943-2368996)
chr3 (128-161)||(2390381-2390414)
chr3 (111-164)||(3748612-3748665)
chr3 (111-164)||(19999874-19999927)
chr3 (111-164)||(22501941-22501994)
chr3 (111-164)||(30779577-30779630)
chr3 (111-164)||(36625181-36625234)
chr3 (119-164)||(39966092-39966137)
chr3 (111-164)||(51772896-51772949)
chr3 (111-164)||(52945902-52945955)
chr3 (111-164)||(52984017-52984070)
chr3 (128-164)||(882396-882432)
chr3 (128-164)||(2522933-2522969)
chr3 (128-164)||(4139007-4139043)
chr3 (128-164)||(4640507-4640543)
chr3 (128-164)||(5636826-5636862)
chr3 (128-164)||(6919990-6920026)
chr3 (128-164)||(7269962-7269998)
chr3 (128-164)||(7920327-7920363)
chr3 (128-164)||(8125646-8125682)
chr3 (128-164)||(9176613-9176649)
chr3 (128-164)||(15975159-15975195)
chr3 (128-164)||(17608346-17608382)
chr3 (128-164)||(19550513-19550549)
chr3 (128-164)||(26942760-26942796)
chr3 (128-164)||(28550346-28550382)
chr3 (128-164)||(31327528-31327564)
chr3 (128-164)||(31327745-31327781)
chr3 (128-164)||(32144591-32144627)
chr3 (128-164)||(37800638-37800674)
chr3 (128-164)||(40192163-40192199)
chr3 (128-164)||(40548310-40548346)
chr3 (128-164)||(40933858-40933894)
chr3 (128-164)||(41936434-41936470)
chr3 (128-164)||(44652009-44652045)
chr3 (128-164)||(45701351-45701387)
chr3 (128-164)||(46880004-46880040)
chr3 (128-164)||(47098739-47098775)
chr3 (128-164)||(50496841-50496877)
chr3 (111-163)||(51467184-51467236)
chr3 (128-164)||(52410268-52410304)
chr3 (128-164)||(53347317-53347353)
[»] scaffold0288 (1 HSPs)
scaffold0288 (118-164)||(21271-21317)
[»] chr1 (42 HSPs)
chr1 (126-160)||(18589788-18589822)
chr1 (111-164)||(42299523-42299576)
chr1 (128-164)||(2754367-2754403)
chr1 (111-163)||(7191040-7191092)
chr1 (128-164)||(42848758-42848794)
chr1 (128-164)||(52426940-52426976)
chr1 (121-164)||(42366870-42366913)
chr1 (121-164)||(44019283-44019326)
chr1 (126-164)||(42054340-42054378)
chr1 (111-164)||(2556563-2556616)
chr1 (111-164)||(3269626-3269679)
chr1 (111-164)||(7166237-7166290)
chr1 (111-164)||(9866194-9866247)
chr1 (111-164)||(16182205-16182258)
chr1 (111-164)||(35605633-35605686)
chr1 (60-101)||(37626104-37626145)
chr1 (111-164)||(42490420-42490473)
chr1 (128-164)||(1570219-1570255)
chr1 (128-164)||(2277761-2277797)
chr1 (128-164)||(2352592-2352628)
chr1 (128-164)||(4482625-4482661)
chr1 (128-164)||(6438091-6438127)
chr1 (128-164)||(6702583-6702619)
chr1 (128-164)||(8865861-8865897)
chr1 (128-164)||(10664821-10664857)
chr1 (128-164)||(11215008-11215044)
chr1 (128-164)||(15819628-15819664)
chr1 (128-164)||(16343035-16343071)
chr1 (128-164)||(21265663-21265699)
chr1 (128-164)||(22563393-22563429)
chr1 (128-160)||(23545481-23545513)
chr1 (128-164)||(25999857-25999893)
chr1 (128-164)||(26584773-26584809)
chr1 (128-164)||(32594258-32594294)
chr1 (128-164)||(33207212-33207248)
chr1 (128-164)||(33254735-33254771)
chr1 (128-164)||(33274907-33274943)
chr1 (128-164)||(34058221-34058257)
chr1 (128-164)||(37662584-37662620)
chr1 (128-164)||(40519571-40519607)
chr1 (128-164)||(46965747-46965783)
chr1 (128-164)||(50899537-50899573)
[»] scaffold0460 (1 HSPs)
scaffold0460 (111-164)||(13213-13266)
[»] scaffold0031 (1 HSPs)
scaffold0031 (111-164)||(50011-50064)
[»] chr2 (31 HSPs)
chr2 (111-164)||(15764937-15764990)
chr2 (111-164)||(28194639-28194692)
chr2 (111-164)||(34434404-34434457)
chr2 (111-164)||(41566769-41566822)
chr2 (128-164)||(5521247-5521283)
chr2 (125-155)||(18559237-18559267)
chr2 (122-164)||(28195155-28195197)
chr2 (126-164)||(30392857-30392895)
chr2 (119-164)||(20641861-20641906)
chr2 (111-164)||(40363081-40363134)
chr2 (123-164)||(41939124-41939165)
chr2 (128-164)||(1844824-1844860)
chr2 (128-164)||(3446737-3446773)
chr2 (128-164)||(4183183-4183219)
chr2 (128-164)||(6635994-6636030)
chr2 (128-164)||(8250328-8250364)
chr2 (128-164)||(18694792-18694828)
chr2 (128-164)||(19281615-19281651)
chr2 (128-164)||(19684080-19684116)
chr2 (128-164)||(20296425-20296461)
chr2 (128-164)||(22589906-22589942)
chr2 (128-164)||(22653671-22653707)
chr2 (128-164)||(25857322-25857358)
chr2 (128-160)||(26307629-26307661)
chr2 (128-164)||(33228960-33228996)
chr2 (128-164)||(34613986-34614022)
chr2 (128-164)||(36182649-36182685)
chr2 (128-164)||(38400317-38400353)
chr2 (128-164)||(41509523-41509559)
chr2 (128-164)||(44857261-44857297)
chr2 (128-164)||(44948603-44948639)
[»] scaffold0154 (1 HSPs)
scaffold0154 (111-149)||(1736-1774)
[»] scaffold0179 (1 HSPs)
scaffold0179 (127-164)||(5989-6026)
[»] scaffold0121 (1 HSPs)
scaffold0121 (111-164)||(46533-46586)
[»] scaffold1372 (1 HSPs)
scaffold1372 (128-164)||(1871-1907)
[»] scaffold0707 (1 HSPs)
scaffold0707 (128-164)||(47-83)
[»] scaffold0608 (1 HSPs)
scaffold0608 (128-164)||(8973-9009)
[»] scaffold0445 (1 HSPs)
scaffold0445 (128-164)||(4041-4077)
[»] scaffold0366 (1 HSPs)
scaffold0366 (128-164)||(887-923)
[»] scaffold0128 (1 HSPs)
scaffold0128 (128-164)||(17627-17663)
[»] scaffold0088 (1 HSPs)
scaffold0088 (128-164)||(10853-10889)
[»] scaffold0024 (1 HSPs)
scaffold0024 (128-164)||(59790-59826)
[»] scaffold0014 (1 HSPs)
scaffold0014 (128-164)||(12288-12324)
[»] scaffold0009 (1 HSPs)
scaffold0009 (128-164)||(266724-266760)


Alignment Details
Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 34040854 - 34040623
Alignment:
Q  1 ttctcttttatgttaaaaatttgtgacaaagctcaagtgttcnnnnnnnnnnnnnnnnggtcaagtaacctagtagttaaaccttacacaatttaattgt 100  Q
    |||||||||||||||||||||||||||||| |||||||||||                ||||||||||||||||||||| |||| |||||||||||||||    
T  34040854 ttctcttttatgttaaaaatttgtgacaaaactcaagtgttctttatttttattttttggtcaagtaacctagtagttagacctcacacaatttaattgt 34040755  T
Q  101 ggaaaaatga-----------tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagccacgaaaatcaagtgttctttatgt 189  Q
    ||| ||||||           ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  34040754 ggagaaatgaggtgtctgagttcgaactccgacccttacatataatatacaatatccctatcaactgagctaagtcacgaaaatcaagtgttctttatgt 34040655  T
Q  190 tagagatgaagaatgggtatggtcgttatatg 221  Q
    |||||||||||||||||| |||||||||||||    
T  34040654 tagagatgaagaatgggtttggtcgttatatg 34040623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 2500524 - 2500577
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  2500524 tcgaactccgacctctacatataatatgcaatatccctaccaactaagctaagc 2500577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 32837402 - 32837349
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  32837402 tcgaaccccaacccttacatataatatgtaatatccctagcaactgagctaagc 32837349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 4661149 - 4661103
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||    
T  4661149 ccaacccctgcatataatatgcaatatccctaccaactaagctaagc 4661103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 27218929 - 27218892
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27218929 tacatataatatgcaatatccctatcaactgagctaag 27218892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 24784248 - 24784202
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  24784248 ccaacccctacatataaaatgcaatatccttatcaactaaactaagc 24784202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3294824 - 3294771
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  3294824 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 3294771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 4408418 - 4408365
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  4408418 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 4408365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 7581104 - 7581051
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | ||||||| |||||||||||||| || |||||||||||    
T  7581104 tcgaaccccaacccctgcatataaaatgcaatatccctaccagctaagctaagc 7581051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 9372211 - 9372264
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  9372211 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 9372264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 9435686 - 9435633
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  9435686 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 9435633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 19892286 - 19892339
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||||||||||||||| ||||| | ||||||    
T  19892286 tcgaaccccgacccctacatataatatgcaatatccctaccaactgaactaagc 19892339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 22997396 - 22997343
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||| ||||||||    
T  22997396 tcgaaccccgacccctacatataatattcaatatccctaccaactgagctaagc 22997343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 23791005 - 23791058
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||| ||||||||||| ||||| ||||||||    
T  23791005 tcgaaccccgacccctacatataatattcaatatccctaccaactgagctaagc 23791058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 33697123 - 33697176
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| |||| | ||||||| |||||||||||||||||||| || |||||    
T  33697123 tcgaactccgacccctgcatataaaatgcaatatccctatcaactgagttaagc 33697176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 607230 - 607194
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  607230 catataatatgcaatatccctaccaactgagctaagc 607194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 2426124 - 2426072
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||||||||| ||||||||||| ||||| |||| ||||| |||||||    
T  2426124 tcgaaccccaacccttgcatataatatgtaatattcctaccaactgagctaag 2426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 3794200 - 3794236
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  3794200 catataatatgcaatatccctaccaactgagctaagc 3794236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 6210114 - 6210062
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| |||||||    
T  6210114 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaag 6210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 7207887 - 7207851
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7207887 catataatatgcaatatccctaccaactgagctaagc 7207851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 7545372 - 7545336
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7545372 catataatatgcaatatccctaccaactgagctaagc 7545336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 7865382 - 7865418
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7865382 catataatatgcaatatccctaccaactgagctaagc 7865418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8439718 - 8439682
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8439718 catataatatgcaatatccctaccaactgagctaagc 8439682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 9246409 - 9246445
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9246409 catataatatgcaatatccctaccaactgagctaagc 9246445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 10934642 - 10934606
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  10934642 catataatatgcaatatccctaccaactgagctaagc 10934606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 15091491 - 15091455
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  15091491 catataatatgcaatatccctaccaactgagctaagc 15091455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 17441866 - 17441902
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17441866 catataatatgcaatatccctaccaactgagctaagc 17441902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 19953855 - 19953891
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19953855 catataatatgcaatatccctaccaactgagctaagc 19953891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 28030907 - 28030871
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  28030907 catataatatgcaatatccctaccaactgagctaagc 28030871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 32611581 - 32611617
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  32611581 catataatatgcaatatccctaccaactgagctaagc 32611617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 33573860 - 33573824
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33573860 catataatatgcaatatccctaccaactgagctaagc 33573824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 65797 - 65850
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  65797 tcgaaccccaacccctacatataatatgcaatatccctaccaactgagctaagc 65850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 8698590 - 8698643
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  8698590 tcgaaccccaacccctacatataatatgcaatatccctaccaactgagctaagc 8698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 16449185 - 16449132
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||| ||||||||    
T  16449185 tcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagc 16449132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 39362325 - 39362272
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||  | |||||||||||||||||||||| ||||| ||||||||    
T  39362325 tcgaactccaacctctgcatataatatgcaatatccctaccaactgagctaagc 39362272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 43656096 - 43656043
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||||||||||||||| ||||| ||||||||    
T  43656096 tcgaaccccgacccctacatataatatgcaatatccctaccaactgagctaagc 43656043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 133458 - 133422
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  133458 catataatatgcaatatccctatcaactgagctaagc 133422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2792822 - 2792786
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  2792822 catataatatgcaatatccctatcaactgagctaagc 2792786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 23435260 - 23435296
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  23435260 catataatatgcaatatccctatcaactgagctaagc 23435296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 26567275 - 26567311
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  26567275 catataatatgcaatatccctatcaactgagctaagc 26567311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 37290965 - 37290929
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||||||||||||||||||||||| |||||    
T  37290965 catataatatgcaatatccctatcaactaagttaagc 37290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 10573161 - 10573110
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||| ||||||    
T  10573161 tcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaa 10573110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 11850670 - 11850709
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctat 150  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  11850670 tcgaacccccacccttacatataatatgcaatatccctat 11850709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 197081 - 197127
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| ||||||| |||||||||||||||| ||||| ||||||||    
T  197081 ccaacccctacatattatatgcaatatccctaccaactgagctaagc 197127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 311918 - 311964
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| ||||||| |||||||||||||||| ||||| ||||||||    
T  311918 ccaacccctacatattatatgcaatatccctaccaactgagctaagc 311964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 4654131 - 4654173
Alignment:
Q  122 cccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||    
T  4654131 cccttgcatataatatgcaatatccctagcaactgagctaagc 4654173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 20540116 - 20540169
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  20540116 tcgaaccccagcccctgcatataatatgcaatatccctaacaactgagctaagc 20540169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 23858257 - 23858204
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||  ||| | |||||||||||||||||||||| ||||| ||||||||    
T  23858257 tcgaactccggcccctgcatataatatgcaatatccctaccaactgagctaagc 23858204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 24296878 - 24296931
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | ||||||||||||||||||||||  |||| ||||||||    
T  24296878 tcgaaccccaacccctgcatataatatgcaatatccctactaactgagctaagc 24296931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 27077107 - 27077160
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  27077107 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 27077160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 32719618 - 32719670
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||||  |||||||||||||||||||||| ||||| ||||||||    
T  32719618 tcgaaccccaaccctg-catataatatgcaatatccctaccaactgagctaagc 32719670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 109
Target Start/End: Complemental strand, 33298006 - 33297957
Alignment:
Q  60 gtcaagtaacctagtagttaaaccttacacaatttaattgtggaaaaatg 109  Q
    |||||||| ||||||||||||| || |||||||| ||||||||| |||||    
T  33298006 gtcaagtagcctagtagttaaagctcacacaattaaattgtggagaaatg 33297957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 34266072 - 34266019
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||| | | |||||||||||||||||||||| ||||| ||||||||    
T  34266072 tcgaaccccaactcctgcatataatatgcaatatccctaccaactgagctaagc 34266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 12252 - 12288
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12252 catataatatgcaatatccctaccaactgagctaagc 12288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 94538 - 94574
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  94538 catataatatgcaatatccctaccaactgagctaagc 94574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 1632386 - 1632430
Alignment:
Q  59 ggtcaagtaacctagtagttaaaccttacacaatttaattgtgga 103  Q
    |||||||||||||||| |||| | || ||||||||||||||||||    
T  1632386 ggtcaagtaacctagtggttagagctcacacaatttaattgtgga 1632430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1937353 - 1937317
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1937353 catataatatgcaatatccctaccaactgagctaagc 1937317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 2787108 - 2787144
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  2787108 catataatatgcaatatccctaccaactgagctaagc 2787144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 5328594 - 5328630
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  5328594 catataatatgcaatatccctaccaactgagctaagc 5328630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8265311 - 8265275
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8265311 catataatatgcaatatccctaccaactgagctaagc 8265275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 8862153 - 8862189
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8862153 catataatatgcaatatccctaccaacttagctaagc 8862189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 10587304 - 10587340
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  10587304 catataatatgcaatatccctaccaactgagctaagc 10587340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 10736901 - 10736937
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  10736901 catataatatgcaatatccctaccaactgagctaagc 10736937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 11875929 - 11875893
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  11875929 catataatatgcaatatccctaccaactgagctaagc 11875893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 11890936 - 11890900
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  11890936 catataatatgcaatatccctaccaactgagctaagc 11890900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 17027907 - 17027943
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17027907 catataatatgcaatatccctaccaactgagctaagc 17027943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 17558343 - 17558379
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17558343 catataatatgcaatatccctaccaactgagctaagc 17558379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 17698565 - 17698529
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17698565 catataatatgcaatatccctaccaactgagctaagc 17698529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 22487928 - 22487884
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    ||||||||| ||||||| |||||||||||||| ||||| ||||||    
T  22487928 ccaacccttgcatataaaatgcaatatccctaccaactgagctaa 22487884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 23178918 - 23178954
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  23178918 catataatatgcaatatccctaccaactgagctaagc 23178954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 24790334 - 24790378
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    |||||| ||||||| ||||||||||||| |||||||||| |||||    
T  24790334 tcgaaccccaacccctacatataatatgtaatatccctaccaact 24790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 26022290 - 26022254
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  26022290 catataatatgcaatatccctaccaactgagctaagc 26022254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 29716903 - 29716867
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  29716903 catataatatgcaatatccctaccaactgagctaagc 29716867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 30972844 - 30972880
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  30972844 catataatatgcaatatccctaccaactgagctaagc 30972880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 34158684 - 34158720
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34158684 catataatatgcaatatccctaccaactgagctaagc 34158720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34413105 - 34413069
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34413105 catataatatgcaatatccctaccaactgagctaagc 34413069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34894412 - 34894376
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34894412 catataatatgcaatatccctaccaactgagctaagc 34894376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 35939530 - 35939494
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  35939530 catataatatgcaatatccctaccaactgagctaagc 35939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 40740568 - 40740532
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| || |||||    
T  40740568 catataatatgcaatatccctatcaactgagttaagc 40740532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 41689925 - 41689889
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41689925 catataatatgcaatatccctaccaactgagctaagc 41689889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 42006821 - 42006785
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  42006821 catataatatgcaatatccctaccaactgagctaagc 42006785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 43085169 - 43085213
Alignment:
Q  59 ggtcaagtaacctagtagttaaaccttacacaatttaattgtgga 103  Q
    ||||||||| |||||| |||| | |||||||||||||||||||||    
T  43085169 ggtcaagtagcctagtggttagagcttacacaatttaattgtgga 43085213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 43403352 - 43403308
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    |||||||||| ||| |||||||||||||||||||| ||| |||||    
T  43403352 tcgaactccagcccctacatataatatgcaatatctctaccaact 43403308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 25672410 - 25672459
Alignment:
Q  113 gaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  25672410 gaactccaacctttatatataatatgcaatatccctatcaactaaactaa 25672459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 19922122 - 19922159
Alignment:
Q  127 acatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||| |||||||||||||||||||||||||||||    
T  19922122 acatataaaatgcaatatccctatcaactaagctaagc 19922159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 47641105 - 47641052
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| |||||||||||||||||||||||| ||||| ||||||||    
T  47641105 tcgaaccccagcccctacatataatatgcaatatccctaccaactgagctaagc 47641052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 2846070 - 2846122
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||||||| ||||||| | |||||||||||||||||||| |||||||    
T  2846070 tcgaaccccaacccctacatattacatgcaatatccctatcaactgagctaag 2846122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 10650 - 10685
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaag 163  Q
    |||||||||||||||||||||| |||||||||||||    
T  10650 catataatatgcaatatccctaccaactaagctaag 10685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 27633991 - 27633940
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||| || |||| | |||||||||||||||||||||| ||||||||||||    
T  27633991 tcgaaccccgacccctgcatataatatgcaatatccctaccaactaagctaa 27633940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 30806175 - 30806124
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    ||||||||| |||| | |||||||||||||||||||||| ||||| ||||||    
T  30806175 tcgaactccgacccctgcatataatatgcaatatccctaccaactgagctaa 30806124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 5804904 - 5804862
Alignment:
Q  122 cccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||    
T  5804904 cccttgcatataaaatgcaatatccctaccaactaagctaagc 5804862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 10244914 - 10244952
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  10244914 tacatataatatgcaatatccctaccaactgagctaagc 10244952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 10690907 - 10690857
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagcta 161  Q
    ||||||||| |||| | ||||||||||||||||||||||||| || |||||    
T  10690907 tcgaactccgacccctgcatataatatgcaatatccctatcagctgagcta 10690857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 12615804 - 12615758
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| | |||||||||||||||||||||||||||| || |||||    
T  12615804 ccaacccctgcatataatatgcaatatccctatcaactgagttaagc 12615758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 21402845 - 21402891
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||| ||||||||| |||||||||||  |||||||||||||    
T  21402845 ccaacccttatatataatatacaatatccctactaactaagctaagc 21402891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 24732576 - 24732614
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  24732576 tacatataatatgcaatatccctaacaactgagctaagc 24732614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 37300124 - 37300162
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  37300124 tacatataatatgcaatatccctaccaactgagctaagc 37300162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 46495146 - 46495096
Alignment:
Q  114 aactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||| | |||||||||| |||||||||| |||| ||||||||||    
T  46495146 aactccaacccctgcatataatatacaatatccctgtcaattaagctaagc 46495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 47999825 - 47999787
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  47999825 tacatataatatgcaatatccctaccaactgagctaagc 47999787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3392527 - 3392474
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| ||||||||||||||||||||| |||||||| || |||||    
T  3392527 tcgaaccccgacccctacatataatatgcaatatccatatcaactgagttaagc 3392474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 15074929 - 15074962
Alignment:
Q  128 catataatatgcaatatccctatcaactaagcta 161  Q
    |||||||||||||||||||||||||||| |||||    
T  15074929 catataatatgcaatatccctatcaactgagcta 15074962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 25833615 - 25833562
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  25833615 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 25833562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 28735788 - 28735735
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||||||| |||||||||||||||||||| ||||| || |||||    
T  28735788 tcgaaccccagcccttacttataatatgcaatatccctaccaactgagttaagc 28735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 41084099 - 41084046
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  41084099 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 41084046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2229018 - 2228982
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  2229018 catataatatgcaatatccctaccaactgagctaagc 2228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2681139 - 2681103
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  2681139 catataatatgcaatatccctaccaactgagctaagc 2681103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 9877294 - 9877330
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9877294 catataatatgcaatatccctaccaactgagctaagc 9877330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 12640616 - 12640652
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12640616 catataatatgcaatatccctaccaactgagctaagc 12640652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 12772158 - 12772122
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12772158 catataatatgcaatatccctaccaactgagctaagc 12772122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 13730124 - 13730160
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  13730124 catataatatgcaatatctctaccaactaagctaagc 13730160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 15238932 - 15238896
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  15238932 catataatatgcaatatccctaccaactgagctaagc 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 18223740 - 18223780
Alignment:
Q  124 cttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||| ||||| || |||||    
T  18223740 cttacatataatatgcaatatccctaccaactgagttaagc 18223780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 19752995 - 19753031
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19752995 catataatatgcaatatccctaccaactgagctaagc 19753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 21066931 - 21066895
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  21066931 tacatataatatgcaatatccctaccaactgagctaa 21066895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 23102585 - 23102621
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  23102585 catataatatgcaatatccctaccaactgagctaagc 23102621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 24781073 - 24781037
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  24781073 catataatatgcaatatccctaccaactgagctaagc 24781037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 27510284 - 27510320
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  27510284 catataatatgcaatatccctaccaactgagctaagc 27510320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 29617448 - 29617412
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  29617448 catataatatgcaatatccctaccaactgagctaagc 29617412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 30388534 - 30388570
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  30388534 catataatatgcaatatccctaccaactgagctaagc 30388570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 32676969 - 32677005
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  32676969 catataatatgcaatatccctaccaactgagctaagc 32677005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 32856927 - 32856979
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    ||||||| || ||| | |||||||||||||||||||||| ||| |||||||||    
T  32856927 tcgaacttcagcccctgcatataatatgcaatatccctaccaattaagctaag 32856979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 35950171 - 35950135
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  35950171 catataatatgcaatatccctaccaactgagctaagc 35950135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 36174433 - 36174397
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  36174433 catataatatgcaatatccctaccaactgagctaagc 36174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 36391931 - 36391967
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  36391931 catataatatgcaatatccctaccaactgagctaagc 36391967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 38824652 - 38824688
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  38824652 catataatacgcaatatccctatcaactgagctaagc 38824688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 41465877 - 41465841
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41465877 catataatatgcaatatccctaccaactgagctaagc 41465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 42433117 - 42433153
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  42433117 tacatataatatacaatatccctaccaactaagctaa 42433153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 42443732 - 42443696
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  42443732 catataatatgcaatatccctaccaactgagctaagc 42443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 44616645 - 44616609
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  44616645 catataatatgcaatatccctaccaactgagctaagc 44616609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 46534775 - 46534811
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  46534775 catataatatgcaatatccctaccaactgagctaagc 46534811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 11146539 - 11146592
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||    
T  11146539 tcgaactccaacccctacatataacatgcaatatccttatcaactgagctaagc 11146592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 42885889 - 42885836
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  42885889 tcgaaccccaacccttacatataatatgcaatatctctaccaacttagctaagc 42885836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 40361589 - 40361640
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||| ||||||    
T  40361589 tcgaaccccaacccttgcatataatatgcaatatccctaccaactgagctaa 40361640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 36735931 - 36735889
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaa 153  Q
    ||||||||| |||| ||||||||||||||||||||||||||||    
T  36735931 tcgaactccgacccctacatataatatgcaatatccctatcaa 36735889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 8241110 - 8241057
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||||| |||||||||||||||||||||| ||||| ||||||||    
T  8241110 tcgaaccccgacccttgcatataatatgcaatatccctaccaactgagctaagc 8241057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 35112972 - 35113025
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||||||||||||||||||||| | ||||||    
T  35112972 tcgaaccccaacccctgcatataatatgcaatatccctatcaactgaactaagc 35113025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2328635 - 2328599
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2328635 catataatatgcaatatccctaccaactaagctaagc 2328599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 39919120 - 39919156
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  39919120 catataatatgcaatatccctaccaactaagctaagc 39919156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 1729527 - 1729489
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  1729527 tacatataatatgcaataaccctatcaactaaactaagc 1729489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 12891602 - 12891564
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  12891602 tacatataatatgcaatatccctaccaactgagctaagc 12891564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 2363029 - 2362976
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||| || |||||    
T  2363029 tcgaaccccaacccctgcatataatatgcaatatccctaccaactgagttaagc 2362976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 15241456 - 15241403
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | ||||||||||||||||| |||||||||| ||||||||    
T  15241456 tcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagc 15241403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 16745141 - 16745104
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccct 148  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  16745141 tcgaactccgacccctacatataatatgcaatatccct 16745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 32392155 - 32392188
Alignment:
Q  130 tataatatgcaatatccctatcaactaagctaag 163  Q
    |||||||||||||||||||| |||||||||||||    
T  32392155 tataatatgcaatatccctaccaactaagctaag 32392188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 36124459 - 36124406
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | ||||||||||||||||| |||||||||| ||||||||    
T  36124459 tcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagc 36124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 42320377 - 42320324
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| || | | |||||||||||||||||||||| ||||| ||||||||    
T  42320377 tcgaactccgactcctgcatataatatgcaatatccctaccaactgagctaagc 42320324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1743170 - 1743134
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1743170 catataatatgcaatatccctaccaactgagctaagc 1743134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 4153607 - 4153563
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    |||||| ||||||| ||||||||| |||||||||||||| |||||    
T  4153607 tcgaaccccaacccatacatataaaatgcaatatccctaccaact 4153563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4417712 - 4417748
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4417712 catataatatgcaatatccctaccaactgagctaagc 4417748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4745903 - 4745939
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4745903 catataatatgcaatatccctaccaactgagctaagc 4745939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 6518803 - 6518839
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6518803 catataatatgcaatatccctaccaactgagctaagc 6518839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8968792 - 8968756
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8968792 catataatatgcaatatccctaccaactgagctaagc 8968756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 9835076 - 9835040
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9835076 catataatatgcaatatccctaccaactgagctaagc 9835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 9958620 - 9958584
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  9958620 catatgatatgcaatatccctatcaactaagttaagc 9958584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 11188709 - 11188745
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  11188709 catataatatgcaatattcctatcaactgagctaagc 11188745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 11897291 - 11897255
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  11897291 catataatatgcaatatccctaccaactgagctaagc 11897255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 12463799 - 12463763
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12463799 catataatatgcaatatccctaccaactgagctaagc 12463763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 154
Target Start/End: Original strand, 12680371 - 12680403
Alignment:
Q  122 cccttacatataatatgcaatatccctatcaac 154  Q
    ||||||||||||||||||||||||| |||||||    
T  12680371 cccttacatataatatgcaatatccatatcaac 12680403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 16386768 - 16386804
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  16386768 catataatatgcaatatccctaccaactgagctaagc 16386804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 16603441 - 16603405
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  16603441 catataatatgcaatatccctaccaactgagctaagc 16603405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 17545199 - 17545235
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17545199 catataatatgcaatatccctaccaactgagctaagc 17545235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21918095 - 21918059
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  21918095 catataatatgcaatatccctaccaactgagctaagc 21918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 25472610 - 25472646
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  25472610 catataatatgcaatatccctaccaactgagctaagc 25472646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 27765300 - 27765264
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  27765300 catataatatgcaatatccctaccaactgagctaagc 27765264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 32505731 - 32505695
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  32505731 catataatatgcaatatccctaccaactgagctaagc 32505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 35515555 - 35515519
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  35515555 catataatatgcaatatccctaccaactgagctaagc 35515519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 41156371 - 41156335
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||  ||||||||    
T  41156371 catataatatgcaatatccctatcaaccgagctaagc 41156335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 41179830 - 41179866
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41179830 catataatatgcaatatccctaccaactgagctaagc 41179866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 481555 - 481608
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  481555 tcgaaccccaacccctacatataatatgcaatatctctaccaactaagctaagc 481608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 27103111 - 27103164
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  27103111 tcgaactccgacctctacatataatatgcaatatccctaccaactaagctaagc 27103164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 54103574 - 54103618
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    |||||||||||||| | ||||||||||||||||||||||||||||    
T  54103574 tcgaactccaacccctgcatataatatgcaatatccctatcaact 54103618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 42395272 - 42395234
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42395272 tacatataatatgcaatatccctaccaactaagctaagc 42395234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 25235807 - 25235860
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||||||||||||    
T  25235807 tcgaaccccagcccctgcatataatatgcaatatccctaccaactaagctaagc 25235860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 39697872 - 39697925
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||||||||| ||||||||    
T  39697872 tcgaaccccgacccctgcatataatatgcaatatccctatcaactgagctaagc 39697925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 40051682 - 40051629
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||||||||||||||| ||||| ||||||||    
T  40051682 tcgaacccctacccctacatataatatgcaatatccctaccaactgagctaagc 40051629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 40994113 - 40994166
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  40994113 tcgaaccccaactcctacatataatatgcaatatccctaccaactgagctaagc 40994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 1458045 - 1458081
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  1458045 catataatatgcaatatccctatcaactgagctaagc 1458081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 3815103 - 3815067
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  3815103 catataatatgcaatatccctaccaactaagctaagc 3815067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4234312 - 4234348
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  4234312 catataatatgcaatatccctatcaactgagctaagc 4234348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 11375916 - 11375952
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  11375916 catataatatgcaatatccctatcaactgagctaagc 11375952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 55238526 - 55238562
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  55238526 catataatatgcaatatccctaccaactaagctaagc 55238562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 7272577 - 7272526
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaa 162  Q
    |||||||||  ||| ||||||||||||||||||||| |||||||| ||||||    
T  7272577 tcgaactccggcccctacatataatatgcaatatccttatcaactgagctaa 7272526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 33530838 - 33530800
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  33530838 tacatataatatgcaatatccctaccaattaagctaagc 33530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 39696362 - 39696400
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  39696362 tacatataatatgcaatatccctaccaactgagctaagc 39696400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 542824 - 542877
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||| ||||||||||||||||||||||| ||||||||    
T  542824 tcgaaccccagcccctgcatacaatatgcaatatccctatcaactgagctaagc 542877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 921489 - 921542
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| |||| | |||||||||||||||| |||| ||||||||| ||||||||    
T  921489 tcgaaccccaaactttacatataatatgcattatctctatcaactgagctaagc 921542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 18002376 - 18002331
Alignment:
Q  119 caacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  18002376 caacccctacatataaaatgcgatatccctatcaattaagctaagc 18002331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 30217659 - 30217606
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||| | ||| | |||||||||||||||||||||| ||||| ||||||||    
T  30217659 tcgaactctagcccctgcatataatatgcaatatccctaccaactgagctaagc 30217606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 31852623 - 31852676
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||| ||||| ||||| || |||||    
T  31852623 tcgaaccccaacccctacatataatatgcaataaccctaccaactgagataagc 31852676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 37935921 - 37935868
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  37935921 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 37935868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 39023235 - 39023182
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  39023235 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 39023182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 43978068 - 43978015
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  43978068 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 43978015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 45849107 - 45849054
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||| ||| | |||| ||||||||||||||||| ||||| ||||||||    
T  45849107 tcgaactccagcccctgcataaaatatgcaatatccctaccaactgagctaagc 45849054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 48569186 - 48569239
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  48569186 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 48569239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 3847724 - 3847688
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  3847724 catataatatgcaatatccctaccaactgagctaagc 3847688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 4105770 - 4105734
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  4105770 catataaaatgcaatatccctatcaactgagctaagc 4105734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 6371157 - 6371121
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6371157 catataatatgcaatatccctaccaactgagctaagc 6371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 8144601 - 8144653
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||| ||| ||||||||||||||||||||||||  |||| |||||||    
T  8144601 tcgaaccccagcccctacatataatatgcaatatccctacaaactgagctaag 8144653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8965137 - 8965101
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8965137 catataatatgcaatatccctaccaactgagctaagc 8965101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 9661610 - 9661566
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    ||||||||| || ||||||||||||||||||||||| || |||||    
T  9661610 tcgaactccgactcttacatataatatgcaatatccataccaact 9661566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 10042428 - 10042472
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    ||||||||| || | |||||||||||||||||||||||| |||||    
T  10042428 tcgaactccgactcctacatataatatgcaatatccctaccaact 10042472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21935520 - 21935484
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  21935520 catataatatgcaatatccctaccaactgagctaagc 21935484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 100
Target Start/End: Original strand, 22230381 - 22230421
Alignment:
Q  60 gtcaagtaacctagtagttaaaccttacacaatttaattgt 100  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  22230381 gtcaagtaacctagtggttaaagctcacacaatttaattgt 22230421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 22230461 - 22230497
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  22230461 catataatatgcaatatccctaccaactgagctaagc 22230497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 22788701 - 22788737
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  22788701 catataatatgcaatatccctaccaactgagctaagc 22788737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 24680113 - 24680149
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  24680113 catataatatgcaatatccctaccaactgagctaagc 24680149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 165
Target Start/End: Original strand, 25726337 - 25726373
Alignment:
Q  129 atataatatgcaatatccctatcaactaagctaagcc 165  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  25726337 atataatatgcaatatccctaccaactgagctaagcc 25726373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 26868392 - 26868356
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  26868392 catataatatgcaatatccctaccaactgagctaagc 26868356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 26919495 - 26919531
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  26919495 catataatatgcaatatccctaccaactgagctaagc 26919531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 157
Target Start/End: Complemental strand, 29520276 - 29520248
Alignment:
Q  129 atataatatgcaatatccctatcaactaa 157  Q
    |||||||||||||||||||||||||||||    
T  29520276 atataatatgcaatatccctatcaactaa 29520248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34353822 - 34353786
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34353822 catataatatgcaatatccctaccaactgagctaagc 34353786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 35207178 - 35207214
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| || |||||    
T  35207178 catataatatgcaatatccctatcaactgagttaagc 35207214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 36132353 - 36132309
Alignment:
Q  59 ggtcaagtaacctagtagttaaaccttacacaatttaattgtgga 103  Q
    ||||||||| |||||| |||| |||| ||||||||||||||||||    
T  36132353 ggtcaagtagcctagtggttagacctcacacaatttaattgtgga 36132309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 42218810 - 42218758
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||| ||| ||| |||||||||||||||||||| ||||| |||||||    
T  42218810 tcgaaccccagcccctacgtataatatgcaatatccctaccaactgagctaag 42218758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 42381123 - 42381175
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| || |||| ||||||||| |||||||||||||| ||||| |||||||    
T  42381123 tcgaaccccgacccctacatataacatgcaatatccctaccaactgagctaag 42381175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 43147411 - 43147447
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  43147411 catataatatgcaatatccctaccaactgagctaagc 43147447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 43207712 - 43207676
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  43207712 catataatatgcaatatccctaccaactgagctaagc 43207676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 43271744 - 43271780
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| | ||||||    
T  43271744 catataatatgcaatatccctatcaactgaactaagc 43271780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 43596938 - 43596902
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  43596938 catataatatgcaatatccctaccaactgagctaagc 43596902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 46105578 - 46105542
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  46105578 catataatatgcaatatccctaccaactgagctaagc 46105542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 46775057 - 46775093
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  46775057 catataatatgcaatatccctaccaactgagctaagc 46775093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 49901525 - 49901489
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  49901525 catataatatgcaatatccctaccaactgagctaagc 49901489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 52699249 - 52699205
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaact 155  Q
    |||||||||||||| |  |||||||||||||||| ||||||||||    
T  52699249 tcgaactccaacccctgtatataatatgcaatattcctatcaact 52699205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 53572354 - 53572390
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| || |||||    
T  53572354 catataatatgcaatatccctatcaactgagttaagc 53572390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 54443907 - 54443943
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| || |||||||||||    
T  54443907 catataatatgcaatatccctaccacctaagctaagc 54443943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 55251378 - 55251414
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  55251378 catataatatgcaatatccctaccaactgagctaagc 55251414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 49750416 - 49750479
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc-cacgaaaat 173  Q
    |||||| ||| ||| | |||||||||||||||||||||||||||| |||||||| |||||||||    
T  49750416 tcgaaccccagcccctgcatataatatgcaatatccctatcaactgagctaagctcacgaaaat 49750479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 31587007 - 31586954
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||| |||| | |||||||||||||||||||||| ||||| ||||||||    
T  31587007 tcgaactccgacccctgcatataatatgcaatatccctaccaactgagctaagc 31586954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 48251615 - 48251579
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  48251615 catataatatgcaatatccctatcaactgagctaagc 48251579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 54769857 - 54769893
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  54769857 catataatatgcaatatccctaccaactaagctaagc 54769893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 17218537 - 17218495
Alignment:
Q  122 cccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||    
T  17218537 cccttgcatataatatgcaatatccctaccaactgagctaagc 17218495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 17602701 - 17602739
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  17602701 tacatataatatgcaatatccctaccaactgagctaagc 17602739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 25279084 - 25279122
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  25279084 tacatataatatacaatatccctaccaactaagctaagc 25279122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 53163639 - 53163601
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  53163639 tacatataatatgcaatatccctaccaactgagctaagc 53163601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 2368996 - 2368943
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  2368996 tcgaaccccagcccctgcatataatatgcaatatccctaacaactgagctaagc 2368943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 2390381 - 2390414
Alignment:
Q  128 catataatatgcaatatccctatcaactaagcta 161  Q
    |||||||||||||||||||||||||||| |||||    
T  2390381 catataatatgcaatatccctatcaactgagcta 2390414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 3748612 - 3748665
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||| ||||||||||| ||||| ||||||||    
T  3748612 tcgaaccccaacccctgcatataatatacaatatccctaccaactgagctaagc 3748665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 19999927 - 19999874
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  19999927 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 19999874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 22501941 - 22501994
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  22501941 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 22501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 30779577 - 30779630
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  30779577 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 30779630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 36625181 - 36625234
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||| | | |||||||||||||||||||||| ||||| ||||||||    
T  36625181 tcgaaccccaactcctgcatataatatgcaatatccctaccaactgagctaagc 36625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 39966092 - 39966137
Alignment:
Q  119 caacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| | |||||||||||||||||||||| ||||| ||||||||    
T  39966092 caacccctgcatataatatgcaatatccctaccaactgagctaagc 39966137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 51772949 - 51772896
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| |||||||| |||||    
T  51772949 tcgaaccccgacccctgcatataatatgcaatatccctaccaactaagttaagc 51772896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 52945955 - 52945902
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  52945955 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 52945902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 52984070 - 52984017
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||||| |||| ||||||||||||||||| ||||| ||||||||    
T  52984070 tcgaaccccgacccttgcatacaatatgcaatatccctaccaactgagctaagc 52984017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 882432 - 882396
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  882432 catataatatgcaatatccctaccaactgagctaagc 882396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2522969 - 2522933
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  2522969 catataatatgcaatatccctaccaactgagctaagc 2522933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 4139043 - 4139007
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4139043 catataatatgcaatatccctaccaactgagctaagc 4139007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4640507 - 4640543
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4640507 catataatatgcaatatccctaccaactgagctaagc 4640543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 5636826 - 5636862
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  5636826 catataatatgcaatatccctaccaactgagctaagc 5636862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 6919990 - 6920026
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6919990 catataatatgcaatatccctaccaactgagctaagc 6920026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 7269998 - 7269962
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7269998 catataatatgcaatatccctaccaactgagctaagc 7269962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 7920363 - 7920327
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  7920363 catataatatgcaatatccctaccaactgagctaagc 7920327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8125682 - 8125646
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8125682 catataatatgcaatatccctaccaactgagctaagc 8125646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 9176613 - 9176649
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9176613 catataatatgcaatatccctaccaactgagctaagc 9176649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 15975195 - 15975159
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  15975195 catataatatgcaatatccctaccaactgagctaagc 15975159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 17608346 - 17608382
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| |||||||| |||||    
T  17608346 catataatatgcaatatccctaccaactaagttaagc 17608382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 19550549 - 19550513
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19550549 catataatatgcaatatccctaccaactgagctaagc 19550513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 26942796 - 26942760
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  26942796 catataatatgcaatatccctaccaactgagctaagc 26942760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 28550346 - 28550382
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  28550346 catataatatgcaatatccctaccaactgagctaagc 28550382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 31327528 - 31327564
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  31327528 catataatatgcaatatccctaccaactgagctaagc 31327564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 31327745 - 31327781
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  31327745 catataatatgcaatatccctaccaactgagctaagc 31327781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 32144627 - 32144591
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||| ||||| ||||||||||||||    
T  32144627 catataatatgcaatacccctaccaactaagctaagc 32144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 37800638 - 37800674
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  37800638 catataatatgcaatatccctaccaactgagctaagc 37800674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 40192199 - 40192163
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  40192199 catataatatgcaatatccctaccaactgagctaagc 40192163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 40548346 - 40548310
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  40548346 catataatatgcaatatccctaccaactgagctaagc 40548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 40933858 - 40933894
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  40933858 catataatatgcaatatccctaccaactgagctaagc 40933894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 41936434 - 41936470
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41936434 catataatatgcaatatccctaccaactgagctaagc 41936470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 44652009 - 44652045
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  44652009 catataatatgcaatatccctaccaactgagctaagc 44652045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 45701387 - 45701351
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  45701387 catataatatgcaatatccctaccaactgagctaagc 45701351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 46880040 - 46880004
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  46880040 catataaaatgcaatatccctatcaactgagctaagc 46880004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 47098775 - 47098739
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  47098775 catataatatgcaatatccctaccaactgagctaagc 47098739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 50496841 - 50496877
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  50496841 catataatatgcaatatccctaccaactgagctaagc 50496877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 51467236 - 51467184
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||||||| | ||||||| |||| ||||||||||||||| |||||||    
T  51467236 tcgaaccccaacccctgcatataaaatgcgatatccctatcaactgagctaag 51467184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 52410268 - 52410304
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  52410268 catataatatgcaatatccctaccaactgagctaagc 52410304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 53347317 - 53347353
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  53347317 catataatatgcaatatccctaccaactgagctaagc 53347353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 21317 - 21271
Alignment:
Q  118 ccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||| | |||||||||||||||||||||| ||||||||||||||    
T  21317 ccaacccctgcatataatatgcaatatccctaccaactaagctaagc 21271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 18589788 - 18589822
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagct 160  Q
    |||||||||||||||||||||||||||||||||||    
T  18589788 tacatataatatgcaatatccctatcaactaagct 18589822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 42299523 - 42299576
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||| | |||||||||||||||||||||| ||||| | ||||||    
T  42299523 tcgaactccaacccctgcatataatatgcaatatccctaccaactgaactaagc 42299576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2754403 - 2754367
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2754403 catataatatgcaatatccctaccaactaagctaagc 2754367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 7191092 - 7191040
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaag 163  Q
    |||||| ||| ||| | |||||||||||||||||||||||||||| |||||||    
T  7191092 tcgaaccccagcccctgcatataatatgcaatatccctatcaactgagctaag 7191040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 42848758 - 42848794
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  42848758 catataatatgcaatatccctatcaactgagctaagc 42848794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 52426940 - 52426976
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  52426940 catataatatgcaatatccctatcaactgagctaagc 52426976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 42366913 - 42366870
Alignment:
Q  121 acccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||    
T  42366913 acccttgcatataaaatgcaatatccctatcaactcagctaagc 42366870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 44019326 - 44019283
Alignment:
Q  121 acccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||    
T  44019326 acccttgcatataaaatgcaatatccctatcaactgagctaagc 44019283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 42054378 - 42054340
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  42054378 tacatataatatgcaatatccctaccaactgagctaagc 42054340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 2556616 - 2556563
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  2556616 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 2556563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 3269679 - 3269626
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  3269679 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 3269626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 7166237 - 7166290
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  7166237 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 7166290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 9866194 - 9866247
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  9866194 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 9866247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 16182258 - 16182205
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||| ||| | |||||||||||||||||| ||| ||||| ||||||||    
T  16182258 tcgaactccagcccatgcatataatatgcaatatctctaccaactcagctaagc 16182205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 35605633 - 35605686
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  35605633 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 35605686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 37626104 - 37626145
Alignment:
Q  60 gtcaagtaacctagtagttaaaccttacacaatttaattgtg 101  Q
    |||||||| ||||||||||||| || ||||||||||||||||    
T  37626104 gtcaagtagcctagtagttaaagctcacacaatttaattgtg 37626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 42490420 - 42490473
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| | |||||||||||||||||||||| ||||| ||||||||    
T  42490420 tcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagc 42490473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 1570219 - 1570255
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1570219 catataatatgcaatatccctaccaactgagctaagc 1570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 2277797 - 2277761
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  2277797 catataatatgcaatatccctaccaactgagctaagc 2277761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 2352592 - 2352628
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  2352592 catataatatgcaatatctctatcaactgagctaagc 2352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4482625 - 4482661
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4482625 catataatatgcaatatccctaccaactgagctaagc 4482661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 6438091 - 6438127
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6438091 catataatatgcaatatccctaccaactgagctaagc 6438127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 6702619 - 6702583
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6702619 catataatatgcaatatccctaccaactgagctaagc 6702583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 8865897 - 8865861
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8865897 catataatatgcaatatccctaccaactgagctaagc 8865861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 10664821 - 10664857
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  10664821 catataatatgcaatatccctaccaactgagctaagc 10664857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 11215044 - 11215008
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  11215044 catataatatgcaatatccctaccaactgagctaagc 11215008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 15819628 - 15819664
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  15819628 catataatatgcaatatccctaccaactgagctaagc 15819664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 16343071 - 16343035
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  16343071 catataatatgcaatatccctaccaactgagctaagc 16343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 21265699 - 21265663
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  21265699 catataatatgcaatatccctaccaactgagctaagc 21265663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 22563429 - 22563393
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  22563429 catataatatgcaatatccctaccaactgagctaagc 22563393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 23545481 - 23545513
Alignment:
Q  128 catataatatgcaatatccctatcaactaagct 160  Q
    |||||||||||||||||||||| ||||||||||    
T  23545481 catataatatgcaatatccctaccaactaagct 23545513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 25999893 - 25999857
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  25999893 catataatatgcaatatccctaccaactgagctaagc 25999857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 26584773 - 26584809
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  26584773 catataatatgcaatatccctaccaactgagctaagc 26584809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 32594294 - 32594258
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  32594294 catataatatgcaatatccctaccaactgagctaagc 32594258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 33207248 - 33207212
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33207248 catataatatgcaatatccctaccaactgagctaagc 33207212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 33254771 - 33254735
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33254771 catataatatgcaatatccctaccaactgagctaagc 33254735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 33274943 - 33274907
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33274943 catataatatgcaatatccctaccaactgagctaagc 33274907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34058257 - 34058221
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34058257 catataatatgcaatatccctaccaactgagctaagc 34058221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 37662584 - 37662620
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  37662584 catataatatgcaatatccctaccaactgagctaagc 37662620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 40519571 - 40519607
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  40519571 catataatatgcaatatccctaccaactgagctaagc 40519607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 46965783 - 46965747
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  46965783 catataatatgcaatatccctaccaactgagctaagc 46965747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 50899537 - 50899573
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  50899537 catataatatgcaatatccctaccaactgagctaagc 50899573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 13213 - 13266
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||| ||||||||    
T  13213 tcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagc 13266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 50011 - 50064
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| | ||||| |||||||||||||||||||||||||||||| || |||||    
T  50011 tcgaaccctaacccctacatataatatgcaatatccctatcaactgagttaagc 50064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 15764990 - 15764937
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||||||||||||||| ||||| ||||||||    
T  15764990 tcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagc 15764937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 28194692 - 28194639
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  28194692 tcgaactccagcccctgcatataatatgcaatatccctagcaactgagctaagc 28194639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 34434404 - 34434457
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||| | |||||||||| |||||||||||||||||||| |||||    
T  34434404 tcgaaccccaacccctgcatataatatacaatatccctatcaactaagttaagc 34434457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 41566822 - 41566769
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||| | ||||||||||||||||| |||| ||||| ||||||||    
T  41566822 tcgaactccaacccctgcatataatatgcaatattcctaccaactgagctaagc 41566769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 5521247 - 5521283
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||||||| ||||||||    
T  5521247 catataatatgcaatatccctatcaactgagctaagc 5521283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 18559237 - 18559267
Alignment:
Q  125 ttacatataatatgcaatatccctatcaact 155  Q
    |||||||||||||||||||||||||||||||    
T  18559237 ttacatataatatgcaatatccctatcaact 18559267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 28195155 - 28195197
Alignment:
Q  122 cccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||    
T  28195155 cccttgcatataatatgcaatatccctaccaactgagctaagc 28195197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 30392857 - 30392895
Alignment:
Q  126 tacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||||| ||||| ||||||||    
T  30392857 tacatataatatgcaatatccctaccaactgagctaagc 30392895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 20641906 - 20641861
Alignment:
Q  119 caacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  20641906 caacccctacatataaaatgcgatatccctatcaattaagctaagc 20641861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 40363081 - 40363134
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| || |||| |||||||||||||||||||||||| ||||| || |||||    
T  40363081 tcgaaccccgacccctacatataatatgcaatatccctaccaactgagttaagc 40363134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 41939124 - 41939165
Alignment:
Q  123 ccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||| |||||| |||||||| ||||||||||||||    
T  41939124 ccttacatatattatgcattatccctaccaactaagctaagc 41939165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1844860 - 1844824
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1844860 catataatatgcaatatccctaccaactgagctaagc 1844824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 3446773 - 3446737
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  3446773 catataatatgcaatatccctaccaactgagctaagc 3446737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 4183219 - 4183183
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4183219 catataatatgcaatatccctaccaactgagctaagc 4183183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 6635994 - 6636030
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  6635994 catataatatgcaatatccctaccaactgagctaagc 6636030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 8250328 - 8250364
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  8250328 catataatatgcaatatccctaccaactgagctaagc 8250364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 18694828 - 18694792
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  18694828 catataatatgcaatatccctaccaactgagctaagc 18694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 19281651 - 19281615
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19281651 catataatatgcaatatccctaccaactgagctaagc 19281615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 19684116 - 19684080
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  19684116 catataatatgcaatatccctaccaactgagctaagc 19684080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 20296461 - 20296425
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  20296461 catataatatgcaatatccttatcaactgagctaagc 20296425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 22589942 - 22589906
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| |||||||| |||||    
T  22589942 catataatatgcaatatccctaccaactaagataagc 22589906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 22653671 - 22653707
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  22653671 catataatatgcaatatccctaccaactgagctaagc 22653707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 25857322 - 25857358
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  25857322 catataatatgcaatatccctaccaactgagctaagc 25857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 26307661 - 26307629
Alignment:
Q  128 catataatatgcaatatccctatcaactaagct 160  Q
    ||||||||||||||||| |||||||||||||||    
T  26307661 catataatatgcaatattcctatcaactaagct 26307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 33228960 - 33228996
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  33228960 catataatatgcaatatccctaccaactgagctaagc 33228996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34614022 - 34613986
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  34614022 catataatatgcaatatccctaccaactgagctaagc 34613986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 36182685 - 36182649
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  36182685 catataatatgcaatatccctaccaactgagctaagc 36182649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 38400353 - 38400317
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  38400353 catataatatgcaatatccctaccaactgagctaagc 38400317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 41509559 - 41509523
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  41509559 catataatatgcaatatccctaccaactgagctaagc 41509523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 44857261 - 44857297
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  44857261 catataatatgcaatatccctaccaactgagctaagc 44857297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 44948639 - 44948603
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  44948639 catataatatgcaatatccctaccaactgagctaagc 44948603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 1736 - 1774
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatcccta 149  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  1736 tcgaaccccaacccttacatataatatgtaatatcccta 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 6026 - 5989
Alignment:
Q  127 acatataatatgcaatatccctatcaactaagctaagc 164  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  6026 acatataatatgcaatatccctatcaaatgagctaagc 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 46586 - 46533
Alignment:
Q  111 tcgaactccaacccttacatataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||| ||| ||| | |||||||||||||||||||||| ||||| ||||||||    
T  46586 tcgaaccccagcccctgcatataatatgcaatatccctaccaactgagctaagc 46533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1372 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1372
Description:

Target: scaffold1372; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 1907 - 1871
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  1907 catataatatgcaatatccctaccaactgagctaagc 1871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 47 - 83
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  47 catataatatgcaatatccctaccaactgagctaagc 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 9009 - 8973
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  9009 catataatatgcaatatccctaccaactgagctaagc 8973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 4041 - 4077
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  4041 catataatatgcaatatccctaccaactgagctaagc 4077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 887 - 923
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  887 catataatatgcaatatccctaccaactgagctaagc 923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 17663 - 17627
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  17663 catataatatgcaatatccctaccaactgagctaagc 17627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 10853 - 10889
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  10853 catataatatgcaatatccctaccaactgagctaagc 10889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 59826 - 59790
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  59826 catataatatgcaatatccctaccaactgagctaagc 59790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 12288 - 12324
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  12288 catataatatgcaatatccctaccaactgagctaagc 12324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Original strand, 266724 - 266760
Alignment:
Q  128 catataatatgcaatatccctatcaactaagctaagc 164  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  266724 catataatatgcaatatccctaccaactgagctaagc 266760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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