View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_high_16 (Length: 486)
Name: NF6314_high_16
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 448; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 16 - 475
Target Start/End: Original strand, 36603141 - 36603600
Alignment:
| Q |
16 |
tcaaatcctttggccgttggacaatgagctaaaggacaaccatcaaggttatttccccaccaatcaatacttatttcctctaatcctaaacaaaggtaca |
115 |
Q |
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| T |
36603141 |
tcaaatcctttggccgttggacaatgagctaaaggacaaccatcaaggttatttccccaccaatcaatacttatttcctctaatcctaaacaaaggtaca |
36603240 |
T |
|
| Q |
116 |
aaaccacacccatgaaagcaagaccagcatccaatgcaccagacaacacataattatgacgctgccaccaatctggtttatacctatacacaacaaaccc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || |
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| T |
36603241 |
aaaccacacccatgaaagcaagaccagcatccaatgcaccagacaacacataattatgacgctgccaccattctggcttatacctatacacaacaaaacc |
36603340 |
T |
|
| Q |
216 |
agacaaaaaaccaacaatgatccagctagtgtaattcactgctgtagctggtggcatcattccagtagcacctatcaacacaggcatgttgatgagttta |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36603341 |
agacaaaaaaccaacaatgatccagctagtgtaattcactgctgtagctggtggcatcattccagtagcacctatcaacacaggcatgttgatgagttta |
36603440 |
T |
|
| Q |
316 |
atccattcttgttgtggaaaggctcttgtagctaaccaaactaacaaaggagcaatggctccacctaggaagaaccaattgatattctcgtaggttccta |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36603441 |
atccattcttgttgtggaaaggctcttgtagctaaccaaactaacaaaggagcaatggctccacctaggaagaaccaattgatattctcgtaggttccta |
36603540 |
T |
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| Q |
416 |
agtttccgaagattcttcttggaccaattaagccccaaataactgatgcatcgtagaata |
475 |
Q |
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| T |
36603541 |
agtttccgaagattcttcttggaccaattaagccccaaataactgatgcatcgtagaata |
36603600 |
T |
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