View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_high_48 (Length: 339)
Name: NF6314_high_48
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_high_48 |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 31858173 - 31858495
Alignment:
| Q |
1 |
tatgagggatggatgcatgatattcgctcaggaatgttagaaacaaacggcaatacaacaagcttcatttattttctgtacaaatgatttaattcaagaa |
100 |
Q |
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| T |
31858173 |
tatgagggatggatgcatgatattcgctcaggaatgttagaaacaaacggcaatacaacaagcttcattcattttctgtacaaatgatttaattcaagaa |
31858272 |
T |
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| Q |
101 |
aattgctggaattcaagtgttaagacatttttctttatgatgatattttgtatgtttctagaaatatacattcgtacgaaaattttttgttcagaagtac |
200 |
Q |
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| T |
31858273 |
aattgctggaattcaagtgttaagacatttttctttatgatgatattttgtatgtttctagaaatatacatttgtacgaaaaaaatttgttcagaagtac |
31858372 |
T |
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| Q |
201 |
actttcggatgacacaaaattagtgttatttatatatgtatacattcgaactcatgttgggaggtgagaactttttccctttatattttataagctatac |
300 |
Q |
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|||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
31858373 |
acttccggacgacacaaaattagtgttatttatagatgtatacattcgaactcatgttgggaggtgagaactttttccatttatattttataagctatac |
31858472 |
T |
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| Q |
301 |
aggaccaatccttagttagcatc |
323 |
Q |
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|||||||||| |||||||||||| |
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| T |
31858473 |
aggaccaatctttagttagcatc |
31858495 |
T |
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