View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_high_53 (Length: 322)
Name: NF6314_high_53
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_high_53 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 50 - 295
Target Start/End: Original strand, 51061430 - 51061671
Alignment:
| Q |
50 |
ttttctggtacaaactggaaattcatctgataagaggcttgtgaattattagcgagatgaaaatgacgtgacagataatgaaaattcgtaaaatcagatt |
149 |
Q |
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| T |
51061430 |
ttttctggtacaaactggaaattcatctgataagaggcttgtgaattattagcgacatgaaaatgacgtgacagataatgaaaattcgtaaaatcagatt |
51061529 |
T |
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| Q |
150 |
tctttgctatatccatccatgggttatttgatcatcctttctttgtttccctttctccggtcaaactaaactaaatgataaaatcattaaatttattgat |
249 |
Q |
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| T |
51061530 |
tctttgctatatcc----atgggttatttgatcatcctttctttgtttccctttctccggtcaaactaaactaaatgataaaatcattaaatttattgat |
51061625 |
T |
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| Q |
250 |
ttcatcctttaaacaatgtaattagagaagttagaatttgctccat |
295 |
Q |
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| T |
51061626 |
ttcatccttaaaacaatgtaattagagaagttagaatttgctccat |
51061671 |
T |
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