View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_high_58 (Length: 304)
Name: NF6314_high_58
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_high_58 |
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Alignment Details
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 70 - 286
Target Start/End: Complemental strand, 34667135 - 34666919
Alignment:
| Q |
70 |
tgttgtcaggtttgtcttgtctagttttcacttccaatcaaatctaaatgcacattagtgattcatttatttaatacttataagtacactgtgtataggt |
169 |
Q |
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| T |
34667135 |
tgttgtcaggtttgtcttgtctagttttcacttccaatcaaatctaaatgcacattagtgattcatttatttaatacttataagtacactgtgtataggt |
34667036 |
T |
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| Q |
170 |
ctttgtttagggacagaaaaacaaacattcacttctagagtactatttcattccctatagcttccgatttccaacacaatttacagcataaacttcccta |
269 |
Q |
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| T |
34667035 |
ctttgattagggacagaaaaacaaacattcacttctagagtactatttcattccctatagcttcctatttccaacacaatttacagcattaacttcccta |
34666936 |
T |
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| Q |
270 |
ccattggtcccactcac |
286 |
Q |
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| T |
34666935 |
ccattggtcccactcac |
34666919 |
T |
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