View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_high_60 (Length: 298)
Name: NF6314_high_60
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_high_60 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 83 - 282
Target Start/End: Original strand, 39678461 - 39678660
Alignment:
| Q |
83 |
caaatagggatttgattcgatttctgcagcacaccgtggttatctgaaggtcctctatacaccttgagaataaatcagttcatgatcaaaaaagcaaacc |
182 |
Q |
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| T |
39678461 |
caaatagggatttgattcgatttctgcagcacaccgtggttatctgaaggtcctctatacaccttgagaataaatcagttcatgatcaaaaaagcaaacc |
39678560 |
T |
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| Q |
183 |
agtgcatcaaatacagaaagtgcatgcttagtttatttttctatataaggaattttgcagggacgctaagagcccagaatatcatattatgagtttcttg |
282 |
Q |
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| T |
39678561 |
agtgcatcgaatacagaaagtgcatgcttagtttatttttctatataaggaattttgcagggacgctaagagcccagaatatcatattatgagtttcttg |
39678660 |
T |
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