View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_low_33 (Length: 410)
Name: NF6314_low_33
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 1 - 390
Target Start/End: Original strand, 43083151 - 43083540
Alignment:
| Q |
1 |
ttgcgccttaatcaaaactacttcaccaaacacactcagaacgttttatacaaaggaaactgctaataatatctttaggatattcattaataaaatatgg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43083151 |
ttgcgccttaatcaaaactacttcaccaaacacactcagaacgttttatacaaaggaaactgctaataatatctttaggatattcattaataaaatatgg |
43083250 |
T |
|
| Q |
101 |
atgtgatgtgtataaaaatagtgtattcagagaaggtgtcacttcaggaaatggttaagagctcgatctcttgctcttttgaattgagaaaattcagaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
43083251 |
atgtgatgtgtataaaaatagtgtattcagagaaggtgtcacttcaggaaatggttaagagctcaatctcttgctcttttgaattgagaaaattcagaga |
43083350 |
T |
|
| Q |
201 |
aggaaaaactcatcttgtgtgtaacggnnnnnnnnatagagattagtcacgttaattgataataaaacttagtatatatactatatannnnnnnnnnnnn |
300 |
Q |
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||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43083351 |
aggaaaaactcatcttgtgtgtaacaggtttttttatagagattagtcacgttaattgataataaaacttagtatatatactatatatttttggtttttt |
43083450 |
T |
|
| Q |
301 |
gtaactagtgttcttaggacacttcttatcatctttcatgttttttctacgatttcaaagaatctatacaattatggggtccaatctgtg |
390 |
Q |
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||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||| |||| |
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| T |
43083451 |
gtaactagtgttcttagcacacttcttatcatcattcatattttttctaggatttcaaagaatctatacaattgtggggtccaatttgtg |
43083540 |
T |
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