View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6314_low_41 (Length: 363)

Name: NF6314_low_41
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6314_low_41
NF6314_low_41
[»] chr4 (14 HSPs)
chr4 (45-184)||(18429792-18429931)
chr4 (263-343)||(18430433-18430513)
chr4 (262-308)||(17186301-17186347)
chr4 (262-339)||(52762929-52763006)
chr4 (263-338)||(20177379-20177455)
chr4 (262-336)||(135821-135895)
chr4 (262-305)||(13159699-13159742)
chr4 (262-293)||(37013918-37013949)
chr4 (262-301)||(39868363-39868402)
chr4 (262-305)||(44546662-44546705)
chr4 (262-305)||(46191195-46191238)
chr4 (262-308)||(22322413-22322459)
chr4 (262-292)||(39683113-39683143)
chr4 (262-291)||(30036668-30036697)
[»] chr3 (4 HSPs)
chr3 (263-343)||(10752232-10752313)
chr3 (262-304)||(7937493-7937535)
chr3 (262-337)||(16898643-16898718)
chr3 (262-333)||(29685632-29685704)
[»] chr2 (11 HSPs)
chr2 (262-338)||(2220097-2220174)
chr2 (262-347)||(12915749-12915835)
chr2 (262-347)||(17607643-17607729)
chr2 (262-347)||(28543765-28543851)
chr2 (262-338)||(45701188-45701265)
chr2 (262-306)||(22653877-22653921)
chr2 (262-305)||(3376168-3376211)
chr2 (262-305)||(39994706-39994749)
chr2 (262-305)||(45468150-45468193)
chr2 (262-342)||(30515782-30515862)
chr2 (266-342)||(32603316-32603392)
[»] chr1 (3 HSPs)
chr1 (262-343)||(24509317-24509398)
chr1 (262-343)||(20819603-20819685)
chr1 (262-338)||(10349537-10349614)
[»] chr6 (8 HSPs)
chr6 (262-343)||(14781983-14782065)
chr6 (263-343)||(12607242-12607322)
chr6 (262-343)||(31848054-31848135)
chr6 (262-293)||(16477626-16477657)
chr6 (262-293)||(18489782-18489813)
chr6 (262-343)||(4103083-4103165)
chr6 (262-342)||(9756485-9756567)
chr6 (265-305)||(2854115-2854155)
[»] chr7 (12 HSPs)
chr7 (262-305)||(22681441-22681484)
chr7 (262-308)||(21120616-21120662)
chr7 (262-305)||(20398899-20398942)
chr7 (266-342)||(13427953-13428029)
chr7 (262-305)||(6459128-6459171)
chr7 (265-347)||(14241288-14241371)
chr7 (262-305)||(32215580-32215623)
chr7 (262-292)||(25145617-25145647)
chr7 (262-308)||(43656156-43656201)
chr7 (262-291)||(7566944-7566973)
chr7 (262-338)||(41242163-41242240)
chr7 (265-305)||(38651328-38651368)
[»] chr5 (13 HSPs)
chr5 (262-305)||(26397286-26397329)
chr5 (262-343)||(37268328-37268410)
chr5 (262-305)||(1585504-1585547)
chr5 (262-305)||(40632648-40632691)
chr5 (265-343)||(7123934-7124013)
chr5 (262-305)||(15504930-15504973)
chr5 (262-305)||(17945875-17945918)
chr5 (262-293)||(21825253-21825284)
chr5 (262-308)||(9194543-9194589)
chr5 (262-308)||(17696034-17696080)
chr5 (262-347)||(23257156-23257242)
chr5 (285-342)||(33651268-33651326)
chr5 (262-342)||(24251297-24251378)
[»] chr8 (4 HSPs)
chr8 (262-338)||(15172815-15172892)
chr8 (262-305)||(9018101-9018144)
chr8 (262-293)||(29934741-29934772)
chr8 (262-342)||(15353345-15353425)
[»] scaffold0267 (1 HSPs)
scaffold0267 (262-305)||(11017-11060)
[»] scaffold1251 (1 HSPs)
scaffold1251 (265-305)||(861-901)


Alignment Details
Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 45 - 184
Target Start/End: Original strand, 18429792 - 18429931
Alignment:
Q  45 agtatgaaattccttatgcatgcaatgcaataaacacgagattttgttgtctaaagagaaaaagctatggatgagaactaaactgcttttaactttttac 144  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  18429792 agtatgaaattccttatgcatgcaattcaatgaacacgagattttgttgtctaaagagaaaaagctatggatgagaactaaactgctttttaacttttac 18429891  T
Q  145 acacgagtttaattatgtcaaaagtttccacatgccaata 184  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18429892 acacgagtttaattatgtcaaaagtttccacatgccaata 18429931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 18430433 - 18430513
Alignment:
Q  263 acaaatcaaaatggaatatattgctcaaaagtagagtgattcatccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||| ||||||||||||||| || |  |||||||| ||  |||||||||||||||||||||||||||||||||    
T  18430433 acaaatcaaaattgaatatattgctcaagagcaaggtgattcacccgcacaagatgtgttaaaagtgatgaatcacccaaa 18430513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 17186347 - 17186301
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  17186347 aacaaatcaaaatggaatatattgctcaaaagaagagtgattcatcc 17186301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 339
Target Start/End: Complemental strand, 52763006 - 52762929
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatc-catacaagatgtgttaaaagtgatgaatcacc 339  Q
    ||||||| |||||||||||||||||||||||||| ||||||||| | | |||||| |||||| ||||||||||||||||    
T  52763006 aacaaattaaaatggaatatattgctcaaaagtatagtgattcacctcgtacaaggtgtgtt-aaagtgatgaatcacc 52762929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 20177379 - 20177455
Alignment:
Q  263 acaaatcaaaatggaatatattgctcaaaagtagagtgattcatc-catacaagatgtgttaaaagtgatgaatcac 338  Q
    |||||||||||| |||||||||||||||  | | ||||||||| | |  ||||||| ||||||||||||||||||||    
T  20177379 acaaatcaaaatcgaatatattgctcaatcgaaaagtgattcacctcgcacaagatatgttaaaagtgatgaatcac 20177455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 336
Target Start/End: Original strand, 135821 - 135895
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatc 336  Q
    |||||||||||||||||||||||||||||| | | |||||||||  || |||||| |||| ||| |||||||||||    
T  135821 aacaaatcaaaatggaatatattgctcaaacg-aaagtgattcaccccgtacaaggtgtgctaagagtgatgaatc 135895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 13159699 - 13159742
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  13159699 aacaaatcaaaatggaatatattgctcaaacgaaaagtgattca 13159742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Original strand, 37013918 - 37013949
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaag 293  Q
    ||||||||||||||||||||||||||||||||    
T  37013918 aacaaatcaaaatggaatatattgctcaaaag 37013949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 39868402 - 39868363
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtga 301  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  39868402 aacaaatcaaaatggaatatattgctgaaaagaagagtga 39868363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 44546705 - 44546662
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  44546705 aacaaatcaaaatggaatatattgctcaaaggaaaagtgattca 44546662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 46191195 - 46191238
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||||||||| | | |||||||||    
T  46191195 aacaaatcaaaatggaatatattgctcaaacgaaaagtgattca 46191238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 22322413 - 22322459
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    ||||||||||||||||||| |||| ||||||| | ||||||||||||    
T  22322413 aacaaatcaaaatggaataaattgttcaaaagcaaagtgattcatcc 22322459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Complemental strand, 39683143 - 39683113
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaa 292  Q
    |||||||||||||||||||||||||||||||    
T  39683143 aacaaatcaaaatggaatatattgctcaaaa 39683113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 291
Target Start/End: Complemental strand, 30036697 - 30036668
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaa 291  Q
    ||||||||||||||||||||||||||||||    
T  30036697 aacaaatcaaaatggaatatattgctcaaa 30036668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 343
Target Start/End: Complemental strand, 10752313 - 10752232
Alignment:
Q  263 acaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||| |||||||||||||||| |||||| ||||||  || |||||| ||||||||||||| |||||||||||||    
T  10752313 acaaatcaaaatagaatatattgctcaaatgtagagggattcaccccgtacaaggtgtgttaaaagtggtgaatcacccaaa 10752232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 7937535 - 7937493
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattc 304  Q
    |||||||||||||||||| ||||||||||| | ||||||||||    
T  7937535 aacaaatcaaaatggaatctattgctcaaaggcagagtgattc 7937493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 16898718 - 16898643
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatca 337  Q
    ||||||||||||||  |||||||||||||||| | ||||||||| |||  |||| ||||| | ||||||||||||||    
T  16898718 aacaaatcaaaatgagatatattgctcaaaagcaaagtgattcactccgcacaaaatgtgct-aaagtgatgaatca 16898643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 333
Target Start/End: Complemental strand, 29685704 - 29685632
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc-atacaagatgtgttaaaagtgatga 333  Q
    ||||||||||||| |||||||||||||||||  | ||||||||| ||   |||||||||  ||||||||||||    
T  29685704 aacaaatcaaaatagaatatattgctcaaaataatagtgattcaccctgcacaagatgtactaaaagtgatga 29685632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 2220097 - 2220174
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatc-catacaagatgtgttaaaagtgatgaatcac 338  Q
    |||||||||||||||| ||||||||||||| | | ||||||||| | ||||||||||||| |||||||||||||||||    
T  2220097 aacaaatcaaaatggattatattgctcaaacgaaaagtgattcacctcatacaagatgtgctaaaagtgatgaatcac 2220174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 12915835 - 12915749
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaaatct 347  Q
    |||||||||||||| ||||||||||||||| |   |||||||||  ||| ||||| |||||||||| ||||||||||| ||||||||    
T  12915835 aacaaatcaaaatgaaatatattgctcaaacgagaagtgattcaccccacacaaggtgtgttaaaactgatgaatcacgcaaaatct 12915749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 17607729 - 17607643
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatc-catacaagatgtgttaaaagtgatgaatcacccaaaatct 347  Q
    ||||||| |||||||||||||||||||||| | | ||||||||| | |  ||||| |||||||||||||||||||||| ||| ||||    
T  17607729 aacaaataaaaatggaatatattgctcaaacggacagtgattcacctcgcacaaggtgtgttaaaagtgatgaatcacacaatatct 17607643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 28543851 - 28543765
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaaatct 347  Q
    ||||||| ||||||||||||||||||||||   | ||||||||| ||||||||||  ||| |||||||| |||||||| ||||||||    
T  28543851 aacaaattaaaatggaatatattgctcaaaccgaaagtgattcactccatacaaggcgtgctaaaagtggtgaatcactcaaaatct 28543765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 45701188 - 45701265
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcca-tacaagatgtgttaaaagtgatgaatcac 338  Q
    |||||||||||||||||||||||||| ||||| | ||||||||| |||  ||||| |||| |||||| ||||||||||    
T  45701188 aacaaatcaaaatggaatatattgcttaaaagaaaagtgattcacccagcacaaggtgtgctaaaagcgatgaatcac 45701265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 22653877 - 22653921
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcat 306  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||    
T  22653877 aacaaatcaaaatggaatatattgctcaaaactaaggtgattcat 22653921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 3376211 - 3376168
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||    
T  3376211 aacaaatcaaaatagaatatattactcaaaagaagagtgattca 3376168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 39994749 - 39994706
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||| ||||||| || |||||||||    
T  39994749 aacaaatcaaaatggaatatattactcaaaaatatagtgattca 39994706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 45468150 - 45468193
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||| ||||||| | |||||||||    
T  45468150 aacaaatcaaaatggaatatattgttcaaaagaaaagtgattca 45468193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 342
Target Start/End: Original strand, 30515782 - 30515862
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaa 342  Q
    |||||||||||||| ||||||| |||||||||  |||||||||| ||   ||||| |||  |||||||||||||||||||||    
T  30515782 aacaaatcaaaatgtaatatat-gctcaaaagcggagtgattcaccccgcacaaggtgtactaaaagtgatgaatcacccaa 30515862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Complemental strand, 32603392 - 32603316
Alignment:
Q  266 aatcaaaatggaatatattgctcaaaagtagagtgattcatcc-atacaagatgtgttaaaagtgatgaatcacccaa 342  Q
    |||||||||| |||||||| ||||||  || ||||||||| || ||| |||||||  |||||||||||||||||||||    
T  32603392 aatcaaaatgaaatatatttctcaaagcta-agtgattcaccccatataagatgtactaaaagtgatgaatcacccaa 32603316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 24509317 - 24509398
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||  ||||| |||| |||||  |||||||||| ||||    
T  24509317 aacaaatcaaaatggaatatattgctcaaaagaagagtgattcacccgcacaaggtgtgctaaaaacgatgaatcactcaaa 24509398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 20819603 - 20819685
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcca-tacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||||||||||||||||||||||| | ||||||||| |||  ||||| |||| |||||  |||||||||| ||||    
T  20819603 aacaaatcaaaatggaatatattgctcaaaagaaaagtgattcacccagcacaaggtgtgctaaaaacgatgaatcactcaaa 20819685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 10349614 - 10349537
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc-atacaagatgtgttaaaagtgatgaatcac 338  Q
    ||||||||||||||||||||||||||||||   | ||||||||| ||   ||||| |||| |||||||||||||||||    
T  10349614 aacaaatcaaaatggaatatattgctcaaactgaaagtgattcaccctgcacaaggtgtgctaaaagtgatgaatcac 10349537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 14781983 - 14782065
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||  ||| ||||| |||| |||||||| |||||||||||||    
T  14781983 aacaaatcaaaatggaatatattgctcaaaagaggagagattcaccccacacaaggtgtgctaaaagtggtgaatcacccaaa 14782065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 343
Target Start/End: Original strand, 12607242 - 12607322
Alignment:
Q  263 acaaatcaaaatggaatatattgctcaaaagtagagtgattcatccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||||||||| |||| ||||| | ||||||||||| ||  ||||| |||| |||||||||| |||||||||||    
T  12607242 acaaatcaaaatggaataaattgttcaaaggcagagtgattcacccgcacaaggtgtgctaaaagtgataaatcacccaaa 12607322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 31848054 - 31848135
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    ||||||||||||||||||| || ||||||||| | ||||||||| ||   ||||| |||| ||||||||||||||||||||||    
T  31848054 aacaaatcaaaatggaataaat-gctcaaaagcaaagtgattcaccccgcacaaggtgtgctaaaagtgatgaatcacccaaa 31848135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Original strand, 16477626 - 16477657
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaag 293  Q
    ||||||||||||||||||||||||||||||||    
T  16477626 aacaaatcaaaatggaatatattgctcaaaag 16477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Complemental strand, 18489813 - 18489782
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaag 293  Q
    ||||||||||||||||||||||||||||||||    
T  18489813 aacaaatcaaaatggaatatattgctcaaaag 18489782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 343
Target Start/End: Original strand, 4103083 - 4103165
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    ||||| |||||||||||||||||||||||||  | |||||||||  ||  |||||  ||| |||||| |||||||||||||||    
T  4103083 aacaagtcaaaatggaatatattgctcaaaatgaaagtgattcaccccgcacaaggcgtgctaaaagcgatgaatcacccaaa 4103165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 9756567 - 9756485
Alignment:
Q  262 aacaaatcaaaatggaatatattgctc-aaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaa 342  Q
    ||||||| ||||||||||| ||||||| |||||||  |||||||| |||  ||||| |||| ||||||||||||| |||||||    
T  9756567 aacaaattaaaatggaataaattgctcaaaaagtaaggtgattcactccgcacaaggtgtgctaaaagtgatgaaacacccaa 9756485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 2854115 - 2854155
Alignment:
Q  265 aaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||| |||||||  |||||||||||    
T  2854115 aaatcaaaatggaatatattactcaaaaacagagtgattca 2854155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 22681441 - 22681484
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  22681441 aacaaatcaaaatggaatatattgctcaaaagaagagtgattca 22681484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 21120662 - 21120616
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    |||||||||||||||||||||||||||||||| || |||||||||||    
T  21120662 aacaaatcaaaatggaatatattgctcaaaagcagtgtgattcatcc 21120616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 20398942 - 20398899
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  20398942 aacaaatcaaaatgaaatatattgctcaaaagcagagtgattca 20398899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 13427953 - 13428029
Alignment:
Q  266 aatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaa 342  Q
    |||||||||| ||||||||||||||||| |  ||||||||  ||| ||||| |||||| |||||||||||||||||||    
T  13427953 aatcaaaatgaaatatattgctcaaaagaaaggtgattcaccccacacaaggtgtgtt-aaagtgatgaatcacccaa 13428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 6459171 - 6459128
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||| ||||||||||||||||| | |||||||||    
T  6459171 aacaaatcaaaatgaaatatattgctcaaaagaaaagtgattca 6459128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 347
Target Start/End: Complemental strand, 14241371 - 14241288
Alignment:
Q  265 aaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaaaatct 347  Q
    ||||||||||| ||||||||||| ||| | | ||||||||| ||   |||||||||| ||||||||||||||||| ||| ||||    
T  14241371 aaatcaaaatgaaatatattgctaaaacgaaaagtgattcaccccgcacaagatgtgctaaaagtgatgaatcacacaatatct 14241288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 32215580 - 32215623
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  32215580 aacaaatcaaaatggaatatattactcaaaaacagagtgattca 32215623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 292
Target Start/End: Original strand, 25145617 - 25145647
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaa 292  Q
    |||||||||||||||||||||||||||||||    
T  25145617 aacaaatcaaaatggaatatattgctcaaaa 25145647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 43656201 - 43656156
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  43656201 aacaaattaaaatggaatatattactcaaaagta-agtgattcatcc 43656156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 291
Target Start/End: Original strand, 7566944 - 7566973
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaa 291  Q
    ||||||||||||||||||||||||||||||    
T  7566944 aacaaatcaaaatggaatatattgctcaaa 7566973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 338
Target Start/End: Original strand, 41242163 - 41242240
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcac 338  Q
    ||||||||||||||||||||||| |||||| | | |||||||||  ||  ||||| |||| ||||| |||||||||||    
T  41242163 aacaaatcaaaatggaatatattactcaaacgaaaagtgattcaccccgcacaaggtgtgctaaaattgatgaatcac 41242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Complemental strand, 38651368 - 38651328
Alignment:
Q  265 aaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||| ||||||| | |||||||||    
T  38651368 aaatcaaaatggaatatattgttcaaaagcatagtgattca 38651328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 26397286 - 26397329
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  26397286 aacaaatcaaaatggaatatattgctcaaaagaagagtgattca 26397329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 262 - 343
Target Start/End: Complemental strand, 37268410 - 37268328
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    |||||||||||||||||||||||||||||| | | |||||||||  || |||||| |||| ||||||||| ||||||| ||||    
T  37268410 aacaaatcaaaatggaatatattgctcaaaggaaaagtgattcaccccgtacaaggtgtgctaaaagtgacgaatcactcaaa 37268328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 1585547 - 1585504
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||| |||||||||||||||||| |||||||||||    
T  1585547 aacaaatcaaaattgaatatattgctcaaaagcagagtgattca 1585504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 40632648 - 40632691
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  40632648 aacaaatcaaaatgaaatatattgctcaaaagaagagtgattca 40632691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 343
Target Start/End: Original strand, 7123934 - 7124013
Alignment:
Q  265 aaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaaa 343  Q
    ||||||||||| |||||||| |||||||| | ||||||||| ||   | ||| |||| ||||||||||||||||||||||    
T  7123934 aaatcaaaatgaaatatatttctcaaaagcaaagtgattcaacccgcataaggtgtgctaaaagtgatgaatcacccaaa 7124013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 15504973 - 15504930
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||| || |||| ||||||||||||    
T  15504973 aacaaatcaaaatggaatatattacttaaaaatagagtgattca 15504930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 17945875 - 17945918
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  17945875 aacaaatcaaaatggaatatattactcaaaaacagagtgattca 17945918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Complemental strand, 21825284 - 21825253
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaag 293  Q
    ||||||||||||||||||||||||||||||||    
T  21825284 aacaaatcaaaatggaatatattgctcaaaag 21825253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 9194543 - 9194589
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    |||||||||||||| |||||||||||  |||| ||||||||||||||    
T  9194543 aacaaatcaaaatgaaatatattgctttaaaggagagtgattcatcc 9194589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 17696034 - 17696080
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatcc 308  Q
    ||||||||||||| ||||||||| |||||||  ||||||||||||||    
T  17696034 aacaaatcaaaatagaatatattactcaaaaacagagtgattcatcc 17696080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 347
Target Start/End: Complemental strand, 23257242 - 23257156
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcacccaaaatct 347  Q
    |||||||||||||||||||||||| ||||| | | |||||||||  ||  ||||| |||| |||||  |||||||||||||| ||||    
T  23257242 aacaaatcaaaatggaatatattgttcaaacgaaaagtgattcaccccgcacaaggtgtgctaaaaccgatgaatcacccaatatct 23257156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 342
Target Start/End: Complemental strand, 33651326 - 33651268
Alignment:
Q  285 gctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaa 342  Q
    ||||||||| ||| ||||||||||   ||||| ||||||||||||||||||||||||||    
T  33651326 gctcaaaagcagaatgattcatcctgcacaaggtgtgttaaaagtgatgaatcacccaa 33651268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 24251378 - 24251297
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaa 342  Q
    |||||| ||||||  ||||||||| |||||||   ||||||||| ||   ||||| ||||||||||||||||||||||||||    
T  24251378 aacaaaccaaaataaaatatattgttcaaaagctaagtgattcaccccgcacaaggtgtgttaaaagtgatgaatcacccaa 24251297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 15172892 - 15172815
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca-tccatacaagatgtgttaaaagtgatgaatcac 338  Q
    ||||||| ||||||||||||||| |||||| | |||||||||||  ||  |||| ||||| |||||||||||||||||    
T  15172892 aacaaattaaaatggaatatatttctcaaacgaagagtgattcaccccgaacaatatgtgctaaaagtgatgaatcac 15172815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 9018144 - 9018101
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||| |||||||||||||||||||||||| | |||||||||    
T  9018144 aacaaattaaaatggaatatattgctcaaaagcaaagtgattca 9018101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Complemental strand, 29934772 - 29934741
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaag 293  Q
    ||||||||||||||||||||||||||||||||    
T  29934772 aacaaatcaaaatggaatatattgctcaaaag 29934741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 342
Target Start/End: Complemental strand, 15353425 - 15353345
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattcatccat-acaagatgtgttaaaagtgatgaatcacccaa 342  Q
    |||||||||||||| ||||||| |||||||||  |||||||||||||   ||||| |||   ||||||||||||||||||||    
T  15353425 aacaaatcaaaatgaaatatat-gctcaaaagcggagtgattcatcccgcacaaggtgtaccaaaagtgatgaatcacccaa 15353345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 11060 - 11017
Alignment:
Q  262 aacaaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||| |||||||  |||||||||||    
T  11060 aacaaatcaaaatggaatatattactcaaaaagagagtgattca 11017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 305
Target Start/End: Original strand, 861 - 901
Alignment:
Q  265 aaatcaaaatggaatatattgctcaaaagtagagtgattca 305  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  861 aaatcaaaatggaatatattgctcaaatgaaaagtgattca 901  T

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