View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_low_50 (Length: 333)
Name: NF6314_low_50
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_low_50 |
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Alignment Details
Target: chr3 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 147 - 296
Target Start/End: Original strand, 8399660 - 8399809
Alignment:
| Q |
147 |
gtcaagacttctacatatcacattcatctagaggcttctgtatcctccatcaccgtgccttcaatgcaaaacccagcatctataactgatattcttgtga |
246 |
Q |
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| T |
8399660 |
gtcaagacttctacatatcacattcctctaaaggcttctgtatcctccatcaccgtgccttcaatgcaaaacccagcatctataactgatattcttgtga |
8399759 |
T |
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| Q |
247 |
gtttctaggtctggtttcaactgacaaagtaacaccattgttaagaactc |
296 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
8399760 |
gtttctaggtctggtttcaactgaaaaagtaacaccattgttaagaactc |
8399809 |
T |
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