View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_low_56 (Length: 318)
Name: NF6314_low_56
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_low_56 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 51276874 - 51276568
Alignment:
| Q |
1 |
aatgatgtttcgttgcctttgccataataaattctggtgccttgaacatctcagatatctgtttgtttagaagtaacactctgttgcttttctccaatgg |
100 |
Q |
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| T |
51276874 |
aatgatgtttcgttgcctttgccataataaattctggtgcgttgaacatctcagatatctgtttgtttagaagtaacactctgttgcttttctccaatgg |
51276775 |
T |
|
| Q |
101 |
atgactgggttacaattccatgttcactttttaaatttaaaaagataatagaagaaatctgnnnnnnnnnnnnnnnnnnnnnnnacttagcaactaaaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
51276774 |
atgactgggttacaattccatgttcactttttaaatttaaaaagataatagaagaaatctgctttgtcttttattttcttttttacttagcaactaaaat |
51276675 |
T |
|
| Q |
201 |
gtaattttttatcttcaaatcttccttcgcataatagttattattctaagattaataatttcagtattcattatttcaaaaatacaattccctagcaatt |
300 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51276674 |
gtaattttttatcttcaaatcttccttagcataatagttattattctaagattaataatttcagtattcattatttcaaaaatacaattccctagcaatt |
51276575 |
T |
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| Q |
301 |
ggttcat |
307 |
Q |
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||||||| |
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| T |
51276574 |
ggttcat |
51276568 |
T |
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