View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6314_low_7 (Length: 762)

Name: NF6314_low_7
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6314_low_7
NF6314_low_7
[»] chr4 (69 HSPs)
chr4 (7-745)||(48730777-48731516)
chr4 (167-347)||(36543738-36543918)
chr4 (167-347)||(9469734-9469914)
chr4 (350-490)||(48739078-48739220)
chr4 (167-347)||(53369829-53370009)
chr4 (167-341)||(21441538-21441712)
chr4 (181-341)||(36156303-36156463)
chr4 (167-347)||(45674792-45674972)
chr4 (167-347)||(56224102-56224282)
chr4 (167-347)||(19852935-19853115)
chr4 (167-347)||(50605965-50606145)
chr4 (177-347)||(15697086-15697256)
chr4 (178-341)||(40797798-40797961)
chr4 (167-341)||(50146927-50147101)
chr4 (166-347)||(11055229-11055410)
chr4 (167-347)||(48977533-48977713)
chr4 (167-337)||(44791256-44791426)
chr4 (198-347)||(7505517-7505666)
chr4 (210-347)||(12789555-12789692)
chr4 (178-347)||(22721296-22721464)
chr4 (209-341)||(51995077-51995209)
chr4 (178-341)||(12673037-12673200)
chr4 (166-341)||(26632892-26633067)
chr4 (167-341)||(32397707-32397881)
chr4 (181-347)||(52706188-52706354)
chr4 (178-347)||(80465-80634)
chr4 (166-347)||(22184459-22184640)
chr4 (178-347)||(46944547-46944716)
chr4 (167-286)||(49820939-49821058)
chr4 (167-286)||(52813558-52813677)
chr4 (166-347)||(48339102-48339283)
chr4 (167-255)||(53369645-53369733)
chr4 (178-280)||(25134542-25134644)
chr4 (194-341)||(49083243-49083390)
chr4 (176-347)||(49405638-49405809)
chr4 (209-341)||(9222141-9222271)
chr4 (167-347)||(19455161-19455341)
chr4 (178-333)||(48151143-48151298)
chr4 (177-347)||(27891354-27891523)
chr4 (178-347)||(24007906-24008075)
chr4 (167-306)||(43812101-43812240)
chr4 (210-280)||(6866173-6866243)
chr4 (166-252)||(16742423-16742509)
chr4 (255-347)||(49376773-49376866)
chr4 (180-276)||(1803468-1803564)
chr4 (180-252)||(38493075-38493147)
chr4 (209-347)||(13455700-13455838)
chr4 (176-347)||(48802478-48802650)
chr4 (182-257)||(24550049-24550124)
chr4 (209-347)||(51407952-51408090)
chr4 (180-253)||(25608750-25608823)
chr4 (165-286)||(44378205-44378326)
chr4 (197-286)||(52733765-52733853)
chr4 (178-347)||(55891988-55892157)
chr4 (218-338)||(34980516-34980636)
chr4 (166-250)||(43387224-43387308)
chr4 (221-280)||(5764643-5764702)
chr4 (221-280)||(5766887-5766946)
chr4 (223-286)||(34718152-34718215)
chr4 (218-341)||(39736691-39736814)
chr4 (235-280)||(13761824-13761869)
chr4 (177-278)||(43798295-43798396)
chr4 (192-341)||(49059799-49059948)
chr4 (217-281)||(25102666-25102730)
chr4 (212-280)||(50710840-50710908)
chr4 (180-252)||(41822079-41822153)
chr4 (222-280)||(5762615-5762673)
chr4 (222-280)||(5769185-5769243)
chr4 (229-282)||(41857160-41857213)
[»] chr3 (40 HSPs)
chr3 (174-347)||(46293216-46293389)
chr3 (167-347)||(39135311-39135491)
chr3 (174-340)||(39469541-39469707)
chr3 (167-347)||(54393446-54393626)
chr3 (166-347)||(9505124-9505305)
chr3 (11-165)||(39135013-39135171)
chr3 (11-165)||(46293429-46293589)
chr3 (167-341)||(39942809-39942983)
chr3 (167-341)||(41609845-41610018)
chr3 (174-347)||(32689133-32689306)
chr3 (167-347)||(33438734-33438914)
chr3 (178-347)||(40943529-40943698)
chr3 (178-347)||(12710670-12710839)
chr3 (178-347)||(19560777-19560946)
chr3 (166-341)||(52934768-52934943)
chr3 (166-347)||(25253658-25253839)
chr3 (178-347)||(30662134-30662303)
chr3 (166-286)||(28242539-28242659)
chr3 (178-341)||(20550211-20550374)
chr3 (181-286)||(5418649-5418754)
chr3 (210-347)||(26049543-26049680)
chr3 (167-347)||(44574483-44574663)
chr3 (174-347)||(23206311-23206483)
chr3 (210-347)||(52199429-52199566)
chr3 (166-276)||(28700953-28701063)
chr3 (166-267)||(52199345-52199446)
chr3 (177-283)||(50965370-50965477)
chr3 (177-283)||(51068505-51068612)
chr3 (209-294)||(54432247-54432332)
chr3 (167-257)||(53529683-53529773)
chr3 (220-341)||(18074586-18074707)
chr3 (231-340)||(30743593-30743702)
chr3 (210-335)||(31589622-31589747)
chr3 (11-60)||(39470703-39470752)
chr3 (206-329)||(15822370-15822493)
chr3 (272-347)||(54432180-54432255)
chr3 (244-346)||(45714730-45714832)
chr3 (177-286)||(26136300-26136409)
chr3 (177-277)||(1072782-1072882)
chr3 (167-273)||(45995257-45995362)
[»] chr7 (58 HSPs)
chr7 (167-347)||(7447838-7448018)
chr7 (170-341)||(20400961-20401132)
chr7 (167-341)||(5776139-5776313)
chr7 (167-341)||(45176207-45176381)
chr7 (167-347)||(665850-666030)
chr7 (178-347)||(33898947-33899116)
chr7 (167-341)||(37334240-37334414)
chr7 (167-347)||(3942138-3942318)
chr7 (167-347)||(5794939-5795119)
chr7 (167-341)||(43052834-43053008)
chr7 (209-341)||(26719819-26719951)
chr7 (181-341)||(45055704-45055864)
chr7 (181-347)||(11595799-11595965)
chr7 (209-347)||(18249996-18250134)
chr7 (167-347)||(22075025-22075205)
chr7 (175-347)||(36926969-36927141)
chr7 (167-346)||(3930720-3930899)
chr7 (11-155)||(7447572-7447721)
chr7 (167-347)||(28949761-28949941)
chr7 (167-286)||(48505852-48505971)
chr7 (210-347)||(17025364-17025501)
chr7 (181-328)||(40480072-40480220)
chr7 (167-347)||(42072045-42072225)
chr7 (210-341)||(18740227-18740358)
chr7 (182-280)||(23237587-23237685)
chr7 (166-347)||(44421904-44422086)
chr7 (209-347)||(49034227-49034365)
chr7 (166-347)||(36472400-36472581)
chr7 (178-347)||(46573615-46573784)
chr7 (167-286)||(26216234-26216353)
chr7 (169-339)||(10618885-10619055)
chr7 (210-340)||(21760593-21760723)
chr7 (166-286)||(33935469-33935589)
chr7 (220-347)||(33124710-33124837)
chr7 (177-347)||(222229-222399)
chr7 (167-277)||(15434205-15434315)
chr7 (178-340)||(23227009-23227171)
chr7 (178-340)||(23236162-23236324)
chr7 (229-347)||(33019325-33019443)
chr7 (166-347)||(37401569-37401750)
chr7 (166-286)||(48634408-48634528)
chr7 (177-347)||(10096443-10096613)
chr7 (182-243)||(23223561-23223622)
chr7 (177-277)||(29037853-29037953)
chr7 (210-280)||(17608717-17608787)
chr7 (177-347)||(33171537-33171707)
chr7 (178-347)||(32356934-32357103)
chr7 (167-347)||(27231542-27231722)
chr7 (209-347)||(35543559-35543694)
chr7 (220-336)||(46652647-46652763)
chr7 (167-258)||(44994056-44994147)
chr7 (247-341)||(388988-389082)
chr7 (180-346)||(31491790-31491956)
chr7 (232-341)||(37106853-37106962)
chr7 (229-278)||(37250058-37250107)
chr7 (212-280)||(37239840-37239908)
chr7 (177-256)||(2466611-2466690)
chr7 (220-257)||(29527401-29527438)
[»] chr5 (43 HSPs)
chr5 (167-347)||(3801367-3801547)
chr5 (176-347)||(38522864-38523035)
chr5 (167-347)||(31620825-31621005)
chr5 (167-341)||(32156955-32157120)
chr5 (167-347)||(27906055-27906235)
chr5 (181-347)||(41783296-41783462)
chr5 (181-340)||(14500716-14500875)
chr5 (167-346)||(18880149-18880328)
chr5 (181-347)||(26218018-26218184)
chr5 (178-347)||(27450584-27450753)
chr5 (166-341)||(1840696-1840871)
chr5 (167-341)||(20190594-20190767)
chr5 (178-347)||(10493953-10494122)
chr5 (167-347)||(15933117-15933300)
chr5 (178-340)||(39407374-39407536)
chr5 (174-347)||(20188937-20189110)
chr5 (210-347)||(27196077-27196214)
chr5 (178-338)||(30660919-30661079)
chr5 (178-347)||(34719660-34719829)
chr5 (183-323)||(11136034-11136173)
chr5 (166-286)||(19282178-19282298)
chr5 (177-341)||(31021830-31021994)
chr5 (220-347)||(29328054-29328180)
chr5 (178-347)||(26298279-26298448)
chr5 (181-340)||(2675987-2676146)
chr5 (176-347)||(32945024-32945195)
chr5 (178-340)||(26299815-26299977)
chr5 (220-331)||(40056382-40056493)
chr5 (178-276)||(39409108-39409206)
chr5 (178-286)||(34723717-34723825)
chr5 (178-341)||(34857315-34857478)
chr5 (177-252)||(43386694-43386769)
chr5 (178-347)||(19716151-19716315)
chr5 (168-340)||(39414140-39414312)
chr5 (217-341)||(34724763-34724887)
chr5 (177-347)||(10327897-10328067)
chr5 (178-341)||(36523719-36523886)
chr5 (181-254)||(4983402-4983475)
chr5 (177-309)||(1225318-1225450)
chr5 (177-245)||(3457793-3457861)
chr5 (178-258)||(30051422-30051502)
chr5 (217-286)||(24536014-24536083)
chr5 (209-276)||(28246731-28246798)
[»] scaffold0022 (1 HSPs)
scaffold0022 (165-341)||(124490-124666)
[»] chr1 (59 HSPs)
chr1 (167-347)||(24469820-24470000)
chr1 (167-347)||(35810675-35810855)
chr1 (167-347)||(47602865-47603045)
chr1 (174-347)||(32179822-32179995)
chr1 (167-347)||(36419058-36419238)
chr1 (178-341)||(40159639-40159802)
chr1 (167-342)||(7596350-7596525)
chr1 (167-341)||(20347625-20347797)
chr1 (167-341)||(42916123-42916297)
chr1 (167-341)||(46264953-46265127)
chr1 (180-341)||(20349116-20349277)
chr1 (181-347)||(43087469-43087635)
chr1 (180-341)||(45653441-45653601)
chr1 (181-341)||(19508499-19508659)
chr1 (166-341)||(23915606-23915781)
chr1 (166-347)||(15306449-15306630)
chr1 (174-347)||(25124888-25125061)
chr1 (178-347)||(29677522-29677691)
chr1 (167-347)||(7702792-7702972)
chr1 (167-347)||(23916767-23916947)
chr1 (167-347)||(37441189-37441369)
chr1 (215-347)||(44596522-44596654)
chr1 (168-347)||(13645183-13645362)
chr1 (210-341)||(28006350-28006481)
chr1 (178-340)||(5204479-5204641)
chr1 (217-347)||(15257174-15257304)
chr1 (174-347)||(42937038-42937211)
chr1 (166-286)||(31869550-31869670)
chr1 (232-347)||(14578588-14578703)
chr1 (177-347)||(39802770-39802940)
chr1 (209-347)||(50447340-50447478)
chr1 (166-347)||(36119028-36119208)
chr1 (178-347)||(38061181-38061350)
chr1 (209-341)||(7956323-7956455)
chr1 (180-347)||(45581011-45581178)
chr1 (241-347)||(12224578-12224684)
chr1 (220-341)||(15014325-15014446)
chr1 (210-347)||(24575909-24576046)
chr1 (176-341)||(31816534-31816699)
chr1 (178-341)||(47983223-47983386)
chr1 (167-348)||(15662906-15663087)
chr1 (167-276)||(40002851-40002960)
chr1 (206-341)||(7995967-7996102)
chr1 (229-347)||(7016078-7016196)
chr1 (167-340)||(29113535-29113707)
chr1 (218-329)||(33233574-33233682)
chr1 (230-341)||(21680665-21680776)
chr1 (209-347)||(27076518-27076656)
chr1 (224-341)||(14101876-14101994)
chr1 (210-287)||(14770579-14770656)
chr1 (194-279)||(14796572-14796657)
chr1 (194-279)||(14805446-14805531)
chr1 (243-347)||(6413272-6413376)
chr1 (194-286)||(11991256-11991348)
chr1 (183-286)||(48575144-48575247)
chr1 (252-347)||(7841665-7841759)
chr1 (178-273)||(8828303-8828398)
chr1 (223-286)||(30251437-30251500)
chr1 (217-349)||(572417-572550)
[»] chr2 (43 HSPs)
chr2 (170-347)||(33831455-33831632)
chr2 (181-341)||(2646983-2647143)
chr2 (167-341)||(26436311-26436484)
chr2 (174-347)||(27634635-27634808)
chr2 (166-347)||(3409191-3409372)
chr2 (167-347)||(36538613-36538793)
chr2 (167-347)||(41959100-41959280)
chr2 (167-338)||(34064662-34064833)
chr2 (174-309)||(38409612-38409747)
chr2 (178-347)||(40458889-40459058)
chr2 (175-347)||(11027873-11028045)
chr2 (183-347)||(30713129-30713293)
chr2 (205-347)||(27464575-27464717)
chr2 (180-348)||(11006976-11007142)
chr2 (175-347)||(27902442-27902613)
chr2 (220-340)||(33163990-33164110)
chr2 (167-277)||(34116246-34116356)
chr2 (376-697)||(7241919-7242240)
chr2 (177-346)||(24844670-24844839)
chr2 (177-280)||(14103234-14103337)
chr2 (167-261)||(39690127-39690221)
chr2 (219-340)||(17616276-17616397)
chr2 (166-347)||(44740486-44740666)
chr2 (210-288)||(1094457-1094535)
chr2 (167-341)||(41332188-41332362)
chr2 (177-350)||(10412407-10412580)
chr2 (217-346)||(17368994-17369122)
chr2 (180-341)||(18667721-18667882)
chr2 (239-341)||(20203723-20203825)
chr2 (218-286)||(2578087-2578155)
chr2 (207-286)||(13829875-13829954)
chr2 (166-252)||(40680177-40680263)
chr2 (177-278)||(9963726-9963827)
chr2 (254-347)||(29806950-29807043)
chr2 (167-236)||(33831384-33831453)
chr2 (101-165)||(20987565-20987629)
chr2 (269-341)||(35796284-35796356)
chr2 (210-341)||(9753107-9753237)
chr2 (167-241)||(20987771-20987845)
chr2 (219-341)||(45383147-45383269)
chr2 (180-248)||(44935737-44935805)
chr2 (178-256)||(2328385-2328463)
chr2 (217-283)||(10196870-10196936)
[»] chr8 (17 HSPs)
chr8 (167-347)||(453440-453620)
chr8 (167-341)||(11161529-11161703)
chr8 (167-341)||(34516095-34516269)
chr8 (181-347)||(43967481-43967647)
chr8 (167-340)||(27189092-27189265)
chr8 (177-347)||(3307901-3308071)
chr8 (181-347)||(33279980-33280146)
chr8 (181-347)||(34655006-34655172)
chr8 (187-306)||(23181132-23181251)
chr8 (177-347)||(9412527-9412697)
chr8 (250-347)||(39478090-39478187)
chr8 (178-346)||(22563974-22564142)
chr8 (247-341)||(43384831-43384925)
chr8 (221-328)||(9135963-9136070)
chr8 (234-340)||(32740663-32740769)
chr8 (186-258)||(10749311-10749383)
chr8 (221-283)||(35058318-35058380)
[»] scaffold0316 (1 HSPs)
scaffold0316 (167-347)||(19253-19433)
[»] chr6 (21 HSPs)
chr6 (166-341)||(4441310-4441485)
chr6 (168-347)||(5640255-5640434)
chr6 (178-347)||(3081721-3081890)
chr6 (167-347)||(10961799-10961979)
chr6 (209-347)||(13312021-13312161)
chr6 (181-347)||(33110429-33110595)
chr6 (167-347)||(9950763-9950943)
chr6 (167-347)||(10346678-10346858)
chr6 (178-340)||(7437272-7437434)
chr6 (167-347)||(8200599-8200768)
chr6 (166-347)||(1501804-1501985)
chr6 (178-347)||(22295884-22296053)
chr6 (166-286)||(6999223-6999343)
chr6 (178-286)||(18095487-18095595)
chr6 (178-341)||(18099784-18099947)
chr6 (167-301)||(27984939-27985073)
chr6 (176-341)||(17441123-17441289)
chr6 (177-236)||(3901548-3901607)
chr6 (294-341)||(12428960-12429007)
chr6 (220-279)||(32163551-32163610)
chr6 (220-253)||(13355722-13355755)
[»] scaffold0260 (2 HSPs)
scaffold0260 (167-341)||(9948-10120)
scaffold0260 (180-341)||(11439-11600)
[»] scaffold0224 (1 HSPs)
scaffold0224 (167-341)||(7317-7491)
[»] scaffold0223 (1 HSPs)
scaffold0223 (176-347)||(14392-14563)
[»] scaffold0954 (1 HSPs)
scaffold0954 (182-280)||(254-352)
[»] scaffold0204 (1 HSPs)
scaffold0204 (166-347)||(26624-26805)
[»] scaffold0171 (1 HSPs)
scaffold0171 (210-347)||(21088-21224)
[»] scaffold0135 (1 HSPs)
scaffold0135 (209-341)||(32794-32924)
[»] scaffold0192 (1 HSPs)
scaffold0192 (189-258)||(25657-25726)
[»] scaffold0444 (1 HSPs)
scaffold0444 (165-286)||(831-952)
[»] scaffold0002 (1 HSPs)
scaffold0002 (178-341)||(96248-96411)
[»] scaffold0063 (1 HSPs)
scaffold0063 (176-286)||(51366-51476)
[»] scaffold0025 (1 HSPs)
scaffold0025 (220-341)||(11400-11521)


Alignment Details
Target: chr4 (Bit Score: 676; Significance: 0; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 676; E-Value: 0
Query Start/End: Original strand, 7 - 745
Target Start/End: Complemental strand, 48731516 - 48730777
Alignment:
Q  7 gagaagaagaagagaaaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactcttatgctactaagtga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48731516 gagaagaagaagagaaaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactcttaagctactaagtga 48731417  T
Q  107 aattcctacttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacgatatcgagccatctcatgaaccaaacgaatcgaactatctat 206  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||||    
T  48731416 aattcctactccctagatggtggaacggatggataaaaagaaaaggagaaatgtaacgacatcgagccatcttatgaaccaaatgaattgaactatctat 48731317  T
Q  207 aattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcga 306  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  48731316 aattcaagtacagctcatttaattaacgaacttaatttttagctcaagttcagtttatttggttcatgaaccaaattcaatggaccaattgtcgagtcga 48731217  T
Q  307 attttgaactatattcgagttggttcggttcattggcagcc-tacggatggccctaaatcacacccatcattaacctcttctaatagtttacaataactt 405  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48731216 atttcgaactatattcgagttggttcggttcattggcagccctacggatggccctaaatcacacccatcattaacctcttctaatagtttacaataactt 48731117  T
Q  406 acttgccattcccaataagctttttctattagaaacaacaaagcttctgcaagagccaaggaataaaaggtatatagagcagatcgacagttcctcttac 505  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48731116 acttgccattcccaataagctttttctatcagaaacgacaaagcttctgcaagagccaaggaataaaaggtatatagagcagatcgacagttcctcttac 48731017  T
Q  506 cggtgtctctgttcgttacctctccaaaatcatgccttactagcttcattgatgagagaaccacactagctgttgcagaaataagttgaagccaatagag 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48731016 cggtgtctctgttcgttacctctccaaaatcatgccttactagcttcattgatgagagaaccacactagctgttgcagaaataagttgaagccaatagag 48730917  T
Q  606 aattctacttacatgccttaaaagaaaaaaccatttagcataaggtaataatggaacttctgagctaacccacatccttgttggtgtccttggtgttgtt 705  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48730916 aattctacttacatgccttaaaagaaaaaaccatttagcataaggtaataatggaacttctgagctaacccacatcctagttggtgtccttggtgttgtt 48730817  T
Q  706 acctcagctctgtgctttgaggtagacaccatttccttga 745  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48730816 acctcagctctgtgctttgaggtagacaccatttccttga 48730777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 36543738 - 36543918
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||| |||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||    
T  36543738 atcgagtcatctcatgaacctaacaaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggcttattt 36543837  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  36543838 ggttcatgaaccaagttcaatggaccaattgtcgagtcgaattacgaactatattcgagttggttcagttcattgtcagcc 36543918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 9469734 - 9469914
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| |||||||||||| ||||||| ||||||| || |||||||||| |||||||||||||||||||||||||| |||| ||||    
T  9469734 atcgagtcatctcatgaacctaacgaatcgaaccatctatagttcaagttcagctcatttaatcaacgaacttaattttcagctcaagtttggctcattt 9469833  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  9469834 ggttcatgaaccaagttcaatagaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgtcagcc 9469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 350 - 490
Target Start/End: Complemental strand, 48739220 - 48739078
Alignment:
Q  350 cggatggccctaaatcacacccatcattaacctcttctaatagtttacaataacttacttgccattcccaataagctttttctattagaaacaac--aaa 447  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||  |||    
T  48739220 cggatggccctaaatcacacccatcattaacctcttcttatagtttacaatagcttacttgtcattcccaataagctttttctatcagaaacaacataaa 48739121  T
Q  448 gcttctgcaagagccaaggaataaaaggtatatagagcagatc 490  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  48739120 gcttctgcaagagccaaggaataaaagatatatagagcagatc 48739078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 53369829 - 53370009
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  53369829 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 53369928  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  || | |||||| |||| | |||||||| ||||||||||||||||||||| |||||    
T  53369929 ggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttggttcggttcattgccagcc 53370009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 21441538 - 21441712
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  21441538 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 21441637  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||||||||||||||||    
T  21441638 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 21441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 36156463 - 36156303
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||  |||| ||||||| || |||| ||| || |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36156463 tgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcaagaaccaa 36156364  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||| | | |||||||||| |||||||  ||||| || |||||||||||||||||||||    
T  36156363 gttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattg 36156303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 45674792 - 45674972
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| |||||||||||||||||||| |||||||||||||||||| | |||  ||     
T  45674792 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaatttaattttcagctcaagtccagctcgtta 45674891  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||| | |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  45674892 ggttcatgaaccaagttcgacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 45674972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 56224102 - 56224282
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||  | ||||||||||| ||||||| ||| |||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  56224102 atcgagccaatttatgaaccaaacaaatcgaattatatatagttcaagttcaacttatttaattaacgaatttaattttcagctcaagttcggctcattt 56224201  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| || |||||| ||||| | |  |||||| ||||| | ||| ||||||| || ||||||||||||||||||| |||||    
T  56224202 ggtttattaaccaagttcaacgaattaattgttgagtcaagtttcgaactatgtttgagttggttcggttcattgtcagcc 56224282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 19852935 - 19853115
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| |  ||  ||     
T  19852935 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccatctcgtta 19853034  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  || | ||||||||||| |  ||||||| ||||||||||||| ||||||| |||||    
T  19853035 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcaaactataatcgagttggttcgattcattgacagcc 19853115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 50605965 - 50606145
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||||||||| |||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  50605965 atcgagccatctcataaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 50606064  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||| |||||||||||||||| |||||    
T  50606065 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgaattggttcggttcattgccagcc 50606145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 15697256 - 15697086
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||||||| ||| ||||| | || |||| || || |||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15697256 ctcatgaaccaaacgagtcggactatgtttagttcatgttcagctcattaagttaacgaacttaatttttagctcaagttcagcttatttggttcatgaa 15697157  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||| ||||| | | ||||||||||||||| | | ||||| |||||||||||  ||||||||||| |||||    
T  15697156 tcaagttcaacgaatcaattgtcgagtcgagtctcgaactttattcgagttgtctcggttcattgtcagcc 15697086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 40797798 - 40797961
Alignment:
Q  178 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  40797798 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 40797896  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||| ||||||| ||||||| |||| || | | | ||||||| || |||||||||||||||||||    
T  40797897 ccaagttcaatgaaccaattatcgaatcaagtatcgaactatttttgagttggttcggttcattg 40797961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 50147101 - 50146927
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| ||||||||||||  |||||||  ||||| | |||| || |||| ||| || |||||||||||||||||||||||| ||| | ||||    
T  50147101 atcgagtcatctcgtgaaccaaacgagccgaactacatataacttaagttcagctcaattagttcacgaacttaattttcagctcaagtccggttcattt 50147002  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| | | |||||||||| |||||||  ||||| || |||| ||||||||||||||||    
T  50147001 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgaattggttcggttcattg 50146927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 11055410 - 11055229
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  |||||| |  |||||||| |||||||||||||||||| |||||||||| ||| |||    
T  11055410 tatcgagtcagctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttccgctcaagttcagctcatt 11055311  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| |||||||    |||| |||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  11055310 tggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcgagttggttcggttcattgtcagcc 11055229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 48977533 - 48977713
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| |||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||| ||||||||||||||| || | ||| |||     
T  48977533 atcgagctatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaatttaattttcagctcatgtccagctcatta 48977632  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||| || ||||| | |  || | ||||||||||| | ||| |||| ||||||||||||||||||||| |||||    
T  48977633 ggttcatgaacgaagttcaacgaattaaatatcgagtcgaatgtcgaattataatcgagttggttcggttcattgccagcc 48977713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 167 - 337
Target Start/End: Complemental strand, 44791426 - 44791256
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||| | || ||||||||||||||||||||||||||||| |||||| | |||  ||     
T  44791426 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaaattcagctcatttaattaacgaacttaattttcagttcaagtgcagctcgtta 44791327  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttc 337  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||||||||||||    
T  44791326 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttc 44791256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 198 - 347
Target Start/End: Original strand, 7505517 - 7505666
Alignment:
Q  198 actatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattg 297  Q
    ||||| ||||| |||||| ||||||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||| ||| ||||| | || ||||     
T  7505517 actatatataactcaagttcaactcatttagttaacgaatttaatttttagctcaagttcggctcatttggttcatgaatcaagttcaacgaactaatta 7505616  T
Q  298 tcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |||||| | || |||||| |||||||||||  ||||||||||| |||||    
T  7505617 ccgagtcaagttctgaactttattcgagttgtatcggttcattgtcagcc 7505666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 210 - 347
Target Start/End: Complemental strand, 12789692 - 12789555
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| || |||||||||||||||||||||||||||||||||||||| |||  || ||||||| |||||| ||||| |||  |  | |||||||||||     
T  12789692 tcaagttcagctcatttaattaacgaacttaattttcagctcaagttcagctcgttaggttcataaaccaagttcaacggattagatatcgagtcgaatg 12789593  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | |||||||| ||||||||||||||||||||| |||||    
T  12789592 tcgaactataatcgagttggttcggttcattgccagcc 12789555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 22721296 - 22721464
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| ||||||||| ||||| |||||| ||||||||||| ||||||||||||||||| |||| ||||| | ||  ||||||||||||||    
T  22721296 tcatgaaccaaacgagtcgaactatatataactcaagttcaactcatttatttaacgaacttaatttt-agcttaagtttgcctcgtttggttcatgaac 22721394  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||||| || ||||  ||| |||| ||  ||||| |||||||||||  ||| ||||||| |||||    
T  22721395 caagttcaatgaactaattaccgaatcgagttccgaactttattcgagttgtctcgattcattgccagcc 22721464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 209 - 341
Target Start/End: Original strand, 51995077 - 51995209
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| |||||| |||| ||||| ||||||||||| ||||||||||||||| |||||||||||||||||| ||||| | |  |||| |||| |||| |    
T  51995077 ttcaagttcaactcgtttatttaacaaacttaattttgagctcaagttcggctcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagt 51995176  T
Q  309 tttgaactatattcgagttggttcggttcattg 341  Q
     | ||||||| ||||||||||||||||||||||    
T  51995177 ctcgaactattttcgagttggttcggttcattg 51995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 12673200 - 12673037
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| |||| || ||||||||||| |||||||||| || |||||||||||||||    
T  12673200 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaatgagcttaattttcaactcaagttcgactcatttggttcatgaac 12673101  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| ||||| |   ||||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  12673100 caagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 12673037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 166 - 341
Target Start/End: Original strand, 26632892 - 26633067
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| ||||||||||||   | ||| ||||| | |||||||||| |  |||||||| ||||||||||||||||||||||||||||| ||| |||    
T  26632892 tatcgagccaactcatgaaccaactaagtcggactatatgtaattcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatt 26632991  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||| |||| |||| ||||| |    ||||||||| |||| ||  |||||||  |||||||||||||||||||||    
T  26632992 tggttaatgagccaagttcaacgagttaattgtcgaatcgagttacgaactattatcgagttggttcggttcattg 26633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 32397881 - 32397707
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||| ||||||| |||| |||  |||| ||||||| || |||| ||| || |||||||||||||| || |||||||||||||||||    
T  32397881 atcgagtcatctcgtgaatcaaacgagtcgagctacatatagttcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggcttattt 32397782  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | |||||||||||| |||   | | ||||||||||||||||||  ||||| || |||| ||||||||||| ||||    
T  32397781 gattcatgaaccaagttcggcgaatcaattgtcgagtcgaattacgaactttaatcgaattggttcggtttattg 32397707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 52706188 - 52706354
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| ||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  52706188 tgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 52706287  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     || || | || ||||  |||||| | ||  ||| | |||||||||||  ||||||||||| |||||    
T  52706288 gtttaacgaactaattaccgagtcaagttccgaattttattcgagttgtatcggttcattgccagcc 52706354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 80465 - 80634
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| ||||| |||   || ||||||| |  |||||||| || |||| ||||||||||| |||||||||| || |||||||||||||||    
T  80465 tcatgaaccaaacgagtcgaattatacgtagttcaagttcggctcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaac 80564  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | |||||  ||| || ||||| ||||||| |||||||||| ||||||||||| |||||    
T  80565 caagttcaacgaaacaattaccgaatcaaatttcgaactattttcgagttggatcggttcattgccagcc 80634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 22184459 - 22184640
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| || |||||||||  || ||||||||| || | ||||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||    
T  22184459 tatcgagccaacttatgaaccaactgagtcgaactatataaagttcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtt 22184558  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  22184559 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 22184640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 46944716 - 46944547
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||    || |||||| | ||| ||||| ||||||| ||||| ||||| |||||||||| || |||||||||||||||    
T  46944716 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgacttatttatttaacgagcttaaatttcaactcaagttcgactcatttggttcatgaac 46944617  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| |  |||||| |||| |||||| | ||||||| || ||||||||||||||||||| |||||    
T  46944616 caagttcaacgagccaattatcgaatcgaatctcgaactatttttgagttggttcggttcattgtcagcc 46944547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 49820939 - 49821058
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||| |||| | |||  ||     
T  49820939 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgtta 49821038  T
Q  267 ggttcatgaaccaaattcaa 286  Q
    |||||||||||||| |||||    
T  49821039 ggttcatgaaccaagttcaa 49821058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 52813558 - 52813677
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||| |||||||||||| ||||||||||||| || |  |||||| || |||||||  |||||||||||||||||||||| |||||| |||  |||    
T  52813558 atcgagccaactcatgaaccaaccgaatcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagcttaagttcagctcgttt 52813657  T
Q  267 ggttcatgaaccaaattcaa 286  Q
    |||||||||||||| |||||    
T  52813658 ggttcatgaaccaagttcaa 52813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 48339283 - 48339102
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||  ||||| |||||||||||| ||||||||  ||||  | |||| || |||| ||| || ||||||||||||||||||||||||||| || |||    
T  48339283 tatcgagttatctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatt 48339184  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || |||||||||||| |||||   | || ||||||| |||||||  ||||| || | ||||||||||| ||||||| |||||    
T  48339183 tgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagcc 48339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 53369645 - 53369733
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagt 255  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||||||||    
T  53369645 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagt 53369733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 178 - 280
Target Start/End: Original strand, 25134542 - 25134644
Alignment:
Q  178 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  25134542 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaa 25134640  T
Q  277 ccaa 280  Q
    ||||    
T  25134641 ccaa 25134644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 49083390 - 49083243
Alignment:
Q  194 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggacca 293  Q
    |||| |||| ||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||  || ||| |||| ||||||||| |||||  ||| |    
T  49083390 tcgagctatatataactcaagtacagctcatttaattaacgaatttaattttcagatcaagttcaactcattaggtttatgaaccaagttcaacagacta 49083291  T
Q  294 attgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| ||||||| |||||  ||||||  || |||||||||| |||||||    
T  49083290 attatcgagtccaatttcaaactattctcaagttggttcgattcattg 49083243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 49405809 - 49405638
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    |||| |||| ||||||| |||||||||| |||| |||||| |  |||||||| || |||| ||||||||||   ||||||||| || ||||||||||| |    
T  49405809 tctcgtgaatcaaacgagtcgaactatccataactcaagttcggctcatttatttgacgagcttaattttcgattcaagttcgactcatttggttcataa 49405710  T
Q  276 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||| ||||| | | |||||  ||| |||| ||| ||||||| |||| ||||||||||||||||| |||||    
T  49405709 accaagttcaacgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 49405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 341
Target Start/End: Complemental strand, 9222271 - 9222141
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||| ||||||| ||||||| |||||||| || |||||||||| || |||||||   |||||||| ||||| | |||||||||||| |||| |    
T  9222271 ttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagt 9222174  T
Q  309 tttgaactatattcgagttggttcggttcattg 341  Q
     | ||||||| ||||||||||||||||||||||    
T  9222173 atcgaactattttcgagttggttcggttcattg 9222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 19455341 - 19455161
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||| ||  |||||||||| | ||||||| | ||||  |||||| |||||||||||  |||| ||||||||||||| ||||||||| ||| ||||    
T  19455341 atcgagccaacttgtgaaccaaacaagtcgaactgtatatagctcaagttcaactcatttagataacaaacttaattttcaactcaagttcagctcattt 19455242  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | |||||||||||| ||||| | |  ||||||| | |||| ||| ||||||| ||||| |  | ||||||||||| |||||    
T  19455241 gattcatgaaccaagttcaacgaattaattgtcaaatcgagtttcgaactattttcgaataagctcggttcattgtcagcc 19455161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 178 - 333
Target Start/End: Complemental strand, 48151298 - 48151143
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||| |||||  |||||| || || |||||| | ||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||  |||||    
T  48151298 tcatgaaccaaccgaattaaactatatacaactcaagttcgacttatttatttaacgaacttaattttcagctcaagttcagctcatttggtttgtgaac 48151199  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcg 333  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||    
T  48151198 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcg 48151143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 27891354 - 27891523
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||| ||| ||||||||| || ||||||| | || |||||||| ||||| || || ||||||||||||||||| ||| |||| |||||||||    
T  27891354 ctcatgaaccaaccgagtcgaactatataaaattcaaattcagctcatttatttaacaaatttgattttcagctcaagttcagctcattt-gttcatgaa 27891452  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| ||||| |    ||||||||| |||| ||  |||||||  |||||||| |||| ||||||| |||||    
T  27891453 ccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttgattcgattcattgtcagcc 27891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 24008075 - 24007906
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | ||  |||||| ||||||||||| ||||||||||||||||| | ||||||||   ||  || |||||||||||    
T  24008075 tcatgaaccaaacgagtcgaaccatatttagctcaagttcaactcatttatttaacgaacttaattttaaactcaagtttaactcgttaggttcatgaac 24007976  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | ||||  || | |||||| | ||||||| |||||||||||||  ||||||| |||||    
T  24007975 caagttcaacgaatcaatcatcaaatcgaatctcgaactattttcgagttggttcaattcattgtcagcc 24007906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 43812240 - 43812101
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| ||||| |||||| ||||||||  | || ||||||| || |||| ||| || ||||||||||||||||| | |||||||||  ||||    
T  43812240 atcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagtttaagttcggcccattt 43812141  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcga 306  Q
    |||||||||||||| ||| | | | |||||||||| ||||    
T  43812140 ggttcatgaaccaagttcgacgaatcaattgtcgaatcga 43812101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 6866243 - 6866173
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||| || |||| ||| || |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6866243 tcaagttcagctcaattagttgacgaacttaattttcagctcaagttcggctcatttggttcatgaaccaa 6866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 16742509 - 16742423
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 252  Q
    ||||||| || |||||||||||| ||||||||||||| || || |||||| || |||||||| ||||||||||||||||||| ||||    
T  16742509 tatcgagtcagctcatgaaccaatcgaatcgaactatatacaactcaagttcagctcatttatttaacgaacttaattttcaactca 16742423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 49376866 - 49376773
Alignment:
Q  255 ttcggcttatttggttcatg-aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| |||| ||||||| || ||| ||||||||||||||||||||||| ||||  ||||||||||||| |||||||||||| ||| |||||    
T  49376866 ttcggctcatttagttcatggaatcaagttcaatggaccaattgtcgagtcaaattacgaactatattcgatttggttcggttcgttgtcagcc 49376773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 180 - 276
Target Start/End: Original strand, 1803468 - 1803564
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||    
T  1803468 atgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 1803564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 38493147 - 38493075
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 252  Q
    ||||||||||||| || || ||| ||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  38493147 atgaaccaaacgagtcaaattatatataactcaagttcaactcatttaattaacaaacttaattttcagctca 38493075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 209 - 347
Target Start/End: Original strand, 13455700 - 13455838
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| |||||| |||| ||||||||||||||||| |||||||||| | || ||||||||||| || ||| ||||| | |  |||| |||| ||||||    
T  13455700 ttcaagttcaactcgtttatttaacgaacttaattttgagctcaagttggactcatttggttcataaatcaagttcaacgaattaattatcgaatcgaat 13455799  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |  || ||| ||| ||||||||||||| |||| |||||    
T  13455800 ctcaaattattttcaagttggttcggtttattgtcagcc 13455838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 48802650 - 48802478
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    |||| |||||||||||| |||||||||  |||  |||||| |  |||||||| || |||| ||||||||||  |||||||||| || |||||||||||||    
T  48802650 tctcgtgaaccaaacgagtcgaactattcatagctcaagttcggctcatttatttgacgagcttaattttcgactcaagttcgactcatttggttcatga 48802551  T
Q  276 accaaattc-aatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | ||| ||| ||   | ||||   | | |||| ||| ||||||| |||||||||||||||||||||| |||||    
T  48802550 atcaagttcaaaaaaatcaataaccaaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 48802478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 24550049 - 24550124
Alignment:
Q  182 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttc 257  Q
    ||||||||||| |||| ||||  |||| |||||| ||||||||||| ||||| ||||||||||| |||||||||||    
T  24550049 gaaccaaacgagtcgagctatacataactcaagttcaactcatttagttaacaaacttaatttttagctcaagttc 24550124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 347
Target Start/End: Complemental strand, 51408090 - 51407952
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||  || |||||||||||||| | | || ||||| || |||||||||||||||||| || || | |  ||||  ||| |||| |    
T  51408090 ttcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcatttggttcatgaaccaagttgaacgaattaattaccgaatcgagt 51407991  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     | ||||||| ||||||||||||| |||||||| |||||    
T  51407990 ctcgaactattttcgagttggttcagttcattgtcagcc 51407952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 180 - 253
Target Start/End: Original strand, 25608750 - 25608823
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaa 253  Q
    ||||| ||||| ||||||| ||| |||||||||||| |||   |||||||||| ||||||||||||||||||||    
T  25608750 atgaaacaaacaaatcgaattatatataattcaagttcaatctatttaattaatgaacttaattttcagctcaa 25608823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 44378205 - 44378326
Alignment:
Q  165 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 264  Q
    ||||||||| |  |||||||||| |||| ||||| |||   ||  |||||| ||||||||||| ||||||| ||||||||||| | ||| |||  || ||    
T  44378205 atatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcat 44378304  T
Q  265 ttggttcatgaaccaaattcaa 286  Q
    |||||||||||||||| |||||    
T  44378305 ttggttcatgaaccaagttcaa 44378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 52733853 - 52733765
Alignment:
Q  197 aactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    |||||| || |||| |||| ||||| ||||| ||||||||||||||||||||||||| |||  || ||||||||||||||  ||||||||    
T  52733853 aactatatacaatttaagttcaacttatttatttaacgaacttaattttcagctcaa-ttcaactcatttggttcatgaattaaattcaa 52733765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 55892157 - 55891988
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||||| |||||||   |   |||||| ||||||||||  || |||||||||||||| | | || ||||| ||  ||||||||||||||    
T  55892157 tcatgaaccaaacgaattgaactatacttggctcaagttcaactcatttgtttgacgaacttaattttaaacccaggttcgactcgtttggttcatgaac 55892058  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | |  ||||  ||| |||| | | ||||||| || |||||||||| |||||||| |||||    
T  55892057 caagttcaacgaattaattaccgaatcgagtctcgaactatttttgagttggttcagttcattgtcagcc 55891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 338
Target Start/End: Complemental strand, 34980636 - 34980516
Alignment:
Q  218 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 317  Q
    |||||||||| ||| |||  |||||||||| ||||||||||  | ||||| |||||||| ||| ||||||| | ||||| |||| |||| | |  |||||    
T  34980636 aactcatttatttagcgagtttaattttcaactcaagttcgattcatttgattcatgaatcaagttcaatgaatcaattatcgaatcgagtctcaaacta 34980537  T
Q  318 tattcgagttggttcggttca 338  Q
    | |||||||||||| ||||||    
T  34980536 ttttcgagttggtttggttca 34980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 43387224 - 43387308
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagct 250  Q
    |||||||||| |||||||||||| ||| ||||||||| || | ||||||| || |||||||  |||||| | |||||||||||||    
T  43387224 tatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagctcatttgtttaacggatttaattttcagct 43387308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 5764702 - 5764643
Alignment:
Q  221 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    ||||||| |||||||| ||||||||||||||||  ||  |||||||||||||||||||||    
T  5764702 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaa 5764643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 5766946 - 5766887
Alignment:
Q  221 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    ||||||| |||||||| ||||||||||||||||  ||  |||||||||||||||||||||    
T  5766946 tcatttatttaacgaatttaattttcagctcaaactcaacttatttggttcatgaaccaa 5766887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 34718152 - 34718215
Alignment:
Q  223 atttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    ||||| |||||||| ||||||||||||| ||||||| || |||| |||||| ||||||||||||    
T  34718152 atttatttaacgaaattaattttcagctgaagttcgactcatttagttcataaaccaaattcaa 34718215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 218 - 341
Target Start/End: Original strand, 39736691 - 39736814
Alignment:
Q  218 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 317  Q
    ||||| |||| ||||| ||||||||||| |  ||||||||| |||||||||| | |||||||||||||| | | ||||| |||| |||| | |  |||||    
T  39736691 aactcgtttatttaacaaacttaatttttaattcaagttcgacttatttggtccgtgaaccaaattcaacgaatcaattatcgaatcgagtctcaaacta 39736790  T
Q  318 tattcgagttggttcggttcattg 341  Q
    | ||||||||| ||| ||| ||||    
T  39736791 ttttcgagttgattcagtttattg 39736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 235 - 280
Target Start/End: Original strand, 13761824 - 13761869
Alignment:
Q  235 aacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  13761824 aacttaattttcagctcaaattcagctcatttggttcatgaaccaa 13761869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 43798396 - 43798295
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||||||| |||||||||  |||  |||||| ||||||||||| |||| || ||| |||||   |||||| ||| || |||||||||| |||    
T  43798396 ctcatgaaccaaacgagtcgaactatacatagctcaagttcaactcatttatttaatgatcttcattttttactcaagctcgactcatttggttcaagaa 43798297  T
Q  277 cc 278  Q
    ||    
T  43798296 cc 43798295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 341
Target Start/End: Complemental strand, 49059948 - 49059799
Alignment:
Q  192 aatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggac 291  Q
    |||| |||||| ||| |||||||| ||  ||| ||| |||| ||||||||||||||||| || |||  |||||||||||||||||  ||||| |||| |     
T  49059948 aatcaaactatatatgattcaagttcagttcacttagttaatgaacttaattttcagctaaaattcaacttatttggttcatgaattaaatttaatgaat 49059849  T
Q  292 caattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     |||| || | || |||| |||| | |||||||||||  | |||||||||    
T  49059848 taattatcaaatcaaattctgaattttattcgagttgactaggttcattg 49059799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 281
Target Start/End: Complemental strand, 25102730 - 25102666
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaa 281  Q
    ||||||||||| ||||| |  ||||| |||| ||||| ||||||| |||||||||||||||||||    
T  25102730 caactcatttatttaacaagtttaatgttcaactcaatttcggctcatttggttcatgaaccaaa 25102666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 280
Target Start/End: Complemental strand, 50710908 - 50710840
Alignment:
Q  212 aagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| ||||| ||||| ||||||| ||||||||||| ||||| |||| || ||||| ||||||||||||    
T  50710908 aagttcaacttatttatttaacgagcttaattttcaactcaatttcgactcatttgattcatgaaccaa 50710840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 41822079 - 41822153
Alignment:
Q  180 atgaaccaaacgaatcgaac--tatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 252  Q
    ||||||||||||||||||||  ||| |||| || |||| || |||||||| ||||| ||||||||||||| ||||    
T  41822079 atgaaccaaacgaatcgaactatatatatagtttaagttcagctcatttagttaacaaacttaattttcaactca 41822153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 5762673 - 5762615
Alignment:
Q  222 catttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||| |||||||| ||||||||||||||||  ||  || ||||||||||||||||||    
T  5762673 catttatttaacgaatttaattttcagctcaaactcaactcatttggttcatgaaccaa 5762615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 5769243 - 5769185
Alignment:
Q  222 catttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||| |||||||| |||||||||||||||| |||  |  ||||||||||||||||||    
T  5769243 catttatttaacgaatttaattttcagctcaaattcaacccatttggttcatgaaccaa 5769185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 41857213 - 41857160
Alignment:
Q  229 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 282  Q
    ||||| |||||||| ||||||| |||||| | | ||||||||||||||||||||    
T  41857213 ttaacaaacttaatcttcagcttaagttcagttcatttggttcatgaaccaaat 41857160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 1e-71; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 174 - 347
Target Start/End: Complemental strand, 46293389 - 46293216
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||||||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46293389 catctcatgaaccaaacgaatcgaactatttatagtttaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcatttggttcat 46293290  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  46293289 gaaccaaattcaattgaccaattgtcaagtcgaattttgaactatattcgagttgattcggttcattgtcagcc 46293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 39135311 - 39135491
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| |||||||||||| ||||||| || |||| || |||||||||||||||||||||||||||||||||||||||||| ||||    
T  39135311 atcgagtcatctcatgaacctaacgaatcgaaccatctatagtttaagttcagctcatttaattaacgaacttaattttcagctcaagttcggctcattt 39135410  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  39135411 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggtttattgccagcc 39135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 174 - 340
Target Start/End: Complemental strand, 39469707 - 39469541
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||| |||||||||||| |||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  39469707 catctcatgaacctaacgaatcgaacaatctataattcaagtttagctcatttaattaacgaacttaattttcagctcaagttcggctcatttgattcat 39469608  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||||||| ||||||||||||||| |||| |||||||  ||||||||||||||||||||| |||||||    
T  39469607 gaaccaagttcaatggaccaattatcgaatcgaattacgaactatattcgagttggttcagttcatt 39469541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 54393626 - 54393446
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| |  |||| ||| || |||||||||||||||||||||||||||||| ||||    
T  54393626 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcattt 54393527  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| ||||||||| ||||| | | |||||||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  54393526 ggtttatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 54393446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 9505305 - 9505124
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||| |||| |||||||| ||||  |||||| || |||||||| |||||||||||||||||||||||||||||  || |||    
T  9505305 tatcgagccagctcatgaaccaaccgaaccgaactatatatatctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcaactcatt 9505206  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||| |    ||||||||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  9505205 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 9505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 39135013 - 39135171
Alignment:
Q  11 agaagaagagaaaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagac---tcttatgct-actaagtga 106  Q
    |||||||||  |||||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||| |||||||| |   ||||| ||| | |||||||    
T  39135013 agaagaagaagaaacgttttatgttttggtggaattgaaaaatggaataatgattaaaggagttaagcaaatgaaggctcttcttaggctaattaagtga 39135112  T
Q  107 aattcctacttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 165  Q
    |||||||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||    
T  39135113 aattcctacttcctagatagtggaacggatgggtaaaaataaaaggagatatgtaacga 39135171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 46293589 - 46293429
Alignment:
Q  11 agaagaagagaaaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagact-------cttatgctactaag 103  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||        ||   ||| ||||    
T  46293589 agaagaagagaaaacgttttatattttggtggaattggaaaatggaataattattaaaggatttaaggaaatgaagactttgggcagttggactaataag 46293490  T
Q  104 tgaaattcctacttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 165  Q
    ||||||||||||| | ||||| ||| ||||||||| | ||||||||||||||||||||||||    
T  46293489 tgaaattcctactccatagatagtgaaacggatgggt-aaaagaaaaggagaaatgtaacga 46293429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 39942983 - 39942809
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| | ||||| |||||||||| |||| | |||||||| |||||| || ||||| || ||||||||||||||||||||||||||||| ||| |||     
T  39942983 atcgagctaactcataaaccaaacgagtcgagccatctataactcaagttcagctcatctatttaacgaacttaattttcagctcaagttcagctcatta 39942884  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||||||||||| |||||  ||  ||||| ||| |||||||| |||||||| |||||||||||| ||||||||    
T  39942883 agttcatgaaccaagttcaacagattaattgccgaatcgaatttcgaactatactcgagttggttcagttcattg 39942809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 41609845 - 41610018
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  41609845 atcgagtcatctcatgaacccaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 41609944  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||| |||||||||||    
T  41609945 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttgg-tcggttcattg 41610018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 32689133 - 32689306
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||  ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||||||    
T  32689133 catctcatgaacttaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat 32689232  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  32689233 gaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 32689306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 33438914 - 33438734
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||| | ||||||||  |||| ||||| |  | |||| ||| || ||||||||||||||||||||||||||| || ||||    
T  33438914 atcgagtcatctcgtgaaccaaacaagtcgaactacatatagttcaactttagctcaattagttgacgaacttaattttcagctcaagttcgactcattt 33438815  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| | | |||||||||| |||||||   |||| || ||||||||||||||||||||| |||||    
T  33438814 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacaaactttaatcgagttggttcggttcattgtcagcc 33438734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 40943529 - 40943698
Alignment:
Q  178 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  40943529 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 40943627  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| | ||||| ||||||| || | |||| | | ||||||| ||||||||||||||||| |||| |||||    
T  40943628 ccaagtccaatgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggtttattgccagcc 40943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 12710670 - 12710839
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||    
T  12710670 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaac 12710769  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| |   ||||| |||| |||||| | ||||||| |||||||||||||||||||||| |||||    
T  12710770 caagttcaacgagtcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattgccagcc 12710839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 19560946 - 19560777
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    |||||||| || ||| || |||||| ||||| |||||| |  |||||||| |||||| |||||| | | | ||||||||| |||| ||| ||||||||||    
T  19560946 tcatgaacaaatcgagtcaaactatatataactcaagttcggctcatttatttaacggacttaactcttaactcaagttcagcttgtttcgttcatgaac 19560847  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | |  |||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  19560846 caagttcaacgaattaattgtcgagtcgaattccgaactatattcgagttggttcggttcattgccagcc 19560777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 166 - 341
Target Start/End: Original strand, 52934768 - 52934943
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||||||| ||| ||||||||| ||||  |||||| |  |||||||| |||||||||||||||||| |||||||||| ||| |||    
T  52934768 tatcgagtcagctcatgaaccaatcgagtcgaactatatatagatcaagttcggctcatttatttaacgaacttaattttctgctcaagttcagctcatt 52934867  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||||||||||| |||||||    |||| |||| |||| ||  |||||||  || ||||||||| ||||||||    
T  52934868 tggttcatgaaccaagttcaatgagttaattatcgaatcgagttccgaactattgtcaagttggttcagttcattg 52934943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 25253658 - 25253839
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||| ||| ||||  ||  ||||  | |||| |  |||||||| ||||||||||||||||| ||||||||||| ||| |||    
T  25253658 tatcgagccaactcatgaaccaatcgagtcgagttacatatagcttaagttcggctcatttatttaacgaacttaatttttagctcaagttcagctcatt 25253757  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| |||||       ||||||||||||| ||   ||||||||||||||||||||||||||||| |||||    
T  25253758 tggttcatgaaccaagttcaacaagtttattgtcgagtcgagttccaaactatattcgagttggttcggttcattgccagcc 25253839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 30662303 - 30662134
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||||||    || |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || ||||| |||||||||    
T  30662303 tcatgaaccaaacgagtcgaactatactcaactcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaac 30662204  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| |   ||||| |||| |||||| |  |||||| ||||||||||||||| |||||| |||||    
T  30662203 caagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcggctcattgtcagcc 30662134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 28242539 - 28242659
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||| ||| ||||||||| || |  |||||| ||  ||||||| |||||||| |||||||||||||||| ||| ||| |||    
T  28242539 tatcgagccagctcatgaaccaaccgagtcgaactatatacagctcaagttcagatcatttatttaacgaatttaattttcagctcaaattcagctcatt 28242638  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    |||||||||||||||||||||    
T  28242639 tggttcatgaaccaaattcaa 28242659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 20550374 - 20550211
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||| ||||||| |||||| ||   || ||||||||||||||||||| |||||||| |||||||||| |||| ||||| || ||||||||| |||||    
T  20550374 tcatgaatcaaacgagtcgaaccatacttagttcaagtacaactcatttatttaacgaatttaattttcaactcatgttcgactcatttggttcgtgaac 20550275  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| |||||   | ||||| |||| |||| | | ||||||| |||||||||||| |||||||||    
T  20550274 caagttcaacaaatcaattatcgaatcgagtatcgaactattttcgagttggtttggttcattg 20550211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 5418649 - 5418754
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    ||||||||| || ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||| ||  |||||||||||||| ||    
T  5418649 tgaaccaaatgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 5418748  T
Q  281 attcaa 286  Q
     |||||    
T  5418749 gttcaa 5418754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 210 - 347
Target Start/End: Complemental strand, 26049680 - 26049543
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| | ||| ||||| ||||||| ||||||||||| |||||||||| || ||||| |||||||||||| |||||  |  ||||| |||| ||||||     
T  26049680 tcaagttcgactaatttatttaacgagcttaattttcaactcaagttcgactcatttgattcatgaaccaagttcaacaggtcaattatcgaatcgaatc 26049581  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |  |||||| |||||||||||||||||||||| |||||    
T  26049580 tcaaactattttcgagttggttcggttcattgccagcc 26049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 44574483 - 44574663
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| | ||||||||||||||||  |||||||| | ||  |||||| |  |||||||||| ||||||||| ||||| | ||||||||| ||| |||     
T  44574483 atcgagctaactcatgaaccaaacgagccgaactatatgtagctcaagttcggctcatttaataaacgaacttgatttttaactcaagttcagctcatta 44574582  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||| |||| || ||||| | |  ||||| ||||||||  || |||||||||||||||||  ||||||||||| |||||    
T  44574583 ggttcacgaactaagttcaacgaattaattgccgagtcgagcttcgaactatattcgagttgtctcggttcattgccagcc 44574663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 174 - 347
Target Start/End: Complemental strand, 23206483 - 23206311
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||| ||  | ||||||||| | ||  | |||| || ||||||||||||| |||||||||||||||||||||| | |||  || |||||||    
T  23206483 catctcatgaacctaataagtcgaactatatgtagcttaagttcagctcatttaattaa-gaacttaattttcagctcaagtccagctcgttaggttcat 23206385  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| || |||||  ||  || | || |||||||| | |||||||| ||||||||||||||||||||| |||||    
T  23206384 gaacaaagttcaacagattaaatatcaagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 23206311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 52199429 - 52199566
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||||||||||||||||| ||||| | |  ||||||||| |||| |     
T  52199429 tcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcgtttggttcatgaaccaagttcaacgaattaattgtcgaatcgagtc 52199528  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
       ||||||  ||||||||||||| ||||||| |||||    
T  52199529 ccaaactattgtcgagttggttcgattcattgtcagcc 52199566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 166 - 276
Target Start/End: Original strand, 28700953 - 28701063
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||| ||| ||| ||||||||  ||||| |||||| ||||||||||  |||||||| ||||||||||| |||| |||  ||||||    
T  28700953 tatcgagtcaactcatgaatcaaccgagtcgaactagatataactcaagttcaactcatttttttaacgaatttaattttcagttcaacttcaacttatt 28701052  T
Q  266 tggttcatgaa 276  Q
    |||||||||||    
T  28701053 tggttcatgaa 28701063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 52199345 - 52199446
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| ||||||||||||  || ||||||||| || |  |||||| || |||||||  ||||||||||||||||||||||||||||| ||| |||    
T  52199345 tatcgagccaactcatgaaccaactgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaattttcagctcaagttcagctcatt 52199444  T
Q  266 tg 267  Q
    ||    
T  52199445 tg 52199446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 50965370 - 50965477
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa-ttttcagctcaagttcggcttatttggttcatga 275  Q
    ||||||| |||| ||| |||||| || ||||  |||||| || |||||||| ||||||||||||| |||||||||||| ||| ||| ||| |||||||||    
T  50965370 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 50965469  T
Q  276 accaaatt 283  Q
    ||||||||    
T  50965470 accaaatt 50965477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 283
Target Start/End: Original strand, 51068505 - 51068612
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa-ttttcagctcaagttcggcttatttggttcatga 275  Q
    ||||||| |||| ||| |||||| || ||||  |||||| || |||||||| ||||||||||||| |||||||||||| ||| ||| ||| |||||||||    
T  51068505 ctcatgagccaatcgagtcgaaccatatatagctcaagttcagctcatttatttaacgaacttaatttttcagctcaaattcagctcattaggttcatga 51068604  T
Q  276 accaaatt 283  Q
    ||||||||    
T  51068605 accaaatt 51068612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 54432332 - 54432247
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaa 294  Q
    ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || |||| ||||||||||||| | ||||| |||||    
T  54432332 ttcaagttcaactcatttatttaacgagcttaatttttaactcaagttcgactcatttagttcatgaaccaagtccaatgaaccaa 54432247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 53529773 - 53529683
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttc 257  Q
    |||||| |||||  |||||||||||| |||||| |  |||| ||||||| || |||| ||| || ||||||||||||||||||||||||||    
T  53529773 atcgagtcatcttgtgaaccaaacgagtcgaacaacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaagttc 53529683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 18074586 - 18074707
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||| |||||||||||||||||||| |||| |||  || |||| ||||||||| ||||||||| | |  |||| || | |||| | | ||||| ||    
T  18074586 ctcatttagttaacgaacttaattttcagttcaaattcaactcatttagttcatgaaacaaattcaacgaattaattatcaaatcgagtctcgaactcta 18074685  T
Q  320 ttcgagttggttcggttcattg 341  Q
    |||||||||| || ||||||||    
T  18074686 ttcgagttggctcagttcattg 18074707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 231 - 340
Target Start/End: Original strand, 30743593 - 30743702
Alignment:
Q  231 aacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggt 330  Q
    ||||||||||||| ||| ||||| ||| ||| |||||||||||||||||| ||||| |     ||  |||||||||  |  |||||||||||||||||||    
T  30743593 aacgaacttaattctcaactcaaattcagctcatttggttcatgaaccaagttcaacgagttcatcttcgagtcgagctccgaactatattcgagttggt 30743692  T
Q  331 tcggttcatt 340  Q
    ||||||||||    
T  30743693 tcggttcatt 30743702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 210 - 335
Target Start/End: Original strand, 31589622 - 31589747
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| |||| | |||| ||||| ||||||||||||| |||||||| | ||||||||||| ||||||||| | ||||| |   |||  ||| || ||||    
T  31589622 tcaagttcaacccgtttatttaacaaacttaattttcaactcaagtttgacttatttggtttatgaaccaagtccaatgaattgattaccgaatcaaatt 31589721  T
Q  310 ttgaactatattcgagttggttcggt 335  Q
    ||||| ||| || |||||||||||||    
T  31589722 ttgaattattttggagttggttcggt 31589747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 39470752 - 39470703
Alignment:
Q  11 agaagaagagaaaacgttttatgttttagtggaattggaaaatggaataa 60  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||    
T  39470752 agaagaagaagaaacgttttatgttttggtggaattggaaaatggaataa 39470703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 206 - 329
Target Start/End: Complemental strand, 15822493 - 15822370
Alignment:
Q  206 taattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcg 305  Q
    |||||||||| |  |||||||| || |||| ||||||||||| |||||||||  || | |||| ||||||||||| ||||| | | |||||  ||| |||    
T  15822493 taattcaagttcggctcatttatttgacgagcttaattttcaactcaagttctactcaattggatcatgaaccaagttcaacgaaacaattaccgaatcg 15822394  T
Q  306 aattttgaactatattcgagttgg 329  Q
    ||||| ||||||| ||||| ||||    
T  15822393 aatttcgaactattttcgaattgg 15822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 54432255 - 54432180
Alignment:
Q  272 atgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||| | ||||| ||||||| |||| |||| | | ||||||| |||||||||||||||||||||| |||||    
T  54432255 atgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 54432180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 45714730 - 45714832
Alignment:
Q  244 ttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggc 343  Q
    ||||||||||||||| || ||||| || ||||| ||| ||||| | | |||||||||| ||||||   ||||| || |||||||||||| |||||||| |    
T  45714730 ttcagctcaagttcgactcatttgatttatgaatcaagttcaacgaatcaattgtcgaatcgaataacgaactttaatcgagttggttcagttcattgcc 45714829  T
Q  344 agc 346  Q
    |||    
T  45714830 agc 45714832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 286
Target Start/End: Original strand, 26136300 - 26136409
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||||||| || |||||| | || || | || ||||||||||  ||||| ||| ||||||| | ||||||||||||| | || |||||| ||    
T  26136300 ctcatgaaccaaacgagtcaaactatatgtagtttatgttcaactcatttgtttaacaaacataattttgaactcaagttcggctcacttagttcataaa 26136399  T
Q  277 ccaaattcaa 286  Q
    |||| |||||    
T  26136400 ccaagttcaa 26136409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 1072882 - 1072782
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||| |||||||||  |||||||| ||||| |||||| ||  |||||  |||||| |||||||||||| ||||||  ||  || ||||||||||||||    
T  1072882 ctcatggaccaaacgaggcgaactatatataactcaagttcagttcattatattaacaaacttaattttcggctcaaactcaactcatttggttcatgaa 1072783  T
Q  277 c 277  Q
    |    
T  1072782 c 1072782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 273
Target Start/End: Original strand, 45995257 - 45995362
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| ||||| |||||||| ||||||  ||||| |||||| || || | ||| || ||||||||||||||  | |||||||| ||| ||||    
T  45995257 atcgagtcatctcgtgaactaaacgaatagaactacatataactcaagttcagcttaattagttgacgaacttaatttt-tgttcaagttcagctcattt 45995355  T
Q  267 ggttcat 273  Q
    |||||||    
T  45995356 ggttcat 45995362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 137; Significance: 4e-71; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 7447838 - 7448018
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| | ||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7447838 atcgagtcgtctcatgaacctaacgaatcgaaccatctatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcattt 7447937  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  7447938 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattatgaactatattcgagttggttcggttcattgtcagcc 7448018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 170 - 341
Target Start/End: Original strand, 20400961 - 20401132
Alignment:
Q  170 gagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggt 269  Q
    |||||| ||||| |||||||||| ||||||||| | ||| |||||| || ||||||||||||| ||||||||| || ||||||||||| | | | | |||    
T  20400961 gagccaactcattaaccaaacgagtcgaactatatgtaactcaagttcagctcatttaattaaagaacttaatatttagctcaagttcagttcagtaggt 20401060  T
Q  270 tcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  20401061 tcatgaaccaaattcaatggactaattaccgagtcgaatttcgaactatattcgagttggttcggttcattg 20401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 5776313 - 5776139
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  5776313 atcgagtcatctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 5776214  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| |||||||||||||||||||||    
T  5776213 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 5776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 45176207 - 45176381
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||| ||| | ||  |||||| |||||||||||||||||||||||||||||||||| |||||| |||  |||    
T  45176207 atcgagtcatctcatgaacctaacgagtcgaattatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctaaagttcagctcgttt 45176306  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  |||| ||||||||||| |  ||||||| ||||||| |||||||||||||    
T  45176307 ggttcatgaaccaagttcaacggattaattatcgagtcgaatgtcaaactataatcgagtttgttcggttcattg 45176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 666030 - 665850
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| |||| |||| | ||  |||| | || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  666030 atcgagccatctcatgaacctaacgagtcgagctatatgtagctcaaattcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 665931  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||||| || |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  665930 ggttcatgaaccaaatttaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 665850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 33899116 - 33898947
Alignment:
Q  178 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || ||| |||| |||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  33899116 tcatgaaccaaacgagtcgaaccatacta-aatttaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaa 33899018  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| | ||||| || |||| |||| |||||| | ||||||| |||||||||||||||||||||| |||||    
T  33899017 ccaagtccaatgaactaattctcgaatcgaatatcgaactattttcgagttggttcggttcattgtcagcc 33898947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 37334240 - 37334414
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| || || ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  37334240 atcgagccatctcatgaacctaatgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 37334339  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | |||| |||||| | |||||||| |||||||||||||||||||||    
T  37334340 ggttcatgaaccaagttcaacggattaaatatcgaatcgaatgtcgaactataatcgagttggttcggttcattg 37334414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 3942138 - 3942318
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| ||||||||||||  |||||||  ||||  |||||| || |||| |||||| ||||||||||||||||||||||||  || | ||||    
T  3942138 atcgagtcatctcgtgaaccaaacgagccgaactacatatagctcaagttcagctcaattaattcacgaacttaattttcagctcaagtctggttcattt 3942237  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||| | ||| |||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  3942238 ggttcatgaaccaagttcaatgaatcaactgtcgaatcgaattacgaactttaatcgagttggttcggttcattgtcagcc 3942318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 5795119 - 5794939
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| | ||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  5795119 atcgagccatctcatgaacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 5795020  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||| ||||||||||||||||| |||||    
T  5795019 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgggttggttcggttcattgccagcc 5794939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 43052834 - 43053008
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||| | ||||| ||||||||| | ||  |||||| || ||||| ||||||||||||||||||||| |||||||| | ||| |||     
T  43052834 atcgagtcatctcatgaatctaacgagtcgaactatatgtagctcaagttcagctcatctaattaacgaacttaattttcggctcaagtccagctcatta 43052933  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| |||||||||||||||||||||    
T  43052934 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattg 43053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 209 - 341
Target Start/End: Original strand, 26719819 - 26719951
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| |||| |    
T  26719819 ttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagt 26719918  T
Q  309 tttgaactatattcgagttggttcggttcattg 341  Q
     | ||||||| |||||||||||||| |||||||    
T  26719919 atcgaactattttcgagttggttcgattcattg 26719951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 45055704 - 45055864
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| ||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  45055704 tgaatcaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 45055803  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  |||||||||||    
T  45055804 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 45055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 11595965 - 11595799
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||| | ||||||||| ||||| |||||  ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  11595965 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 11595866  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  11595865 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 11595799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 209 - 347
Target Start/End: Complemental strand, 18250134 - 18249996
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||| ||||||| | ||||||||| |||||||||| || |||||||||||||||||| ||||| | | ||||| |||| |||| |    
T  18250134 ttcaagttcaactcatttatttaacgagcataattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaatcaattatcgaatcgagt 18250035  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||||||||| |||||||||||||||||||||| |||||    
T  18250034 cttgaactattttcgagttggttcggttcattgccagcc 18249996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 22075025 - 22075205
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||| || ||||||||| ||| ||||||||| || |  |||||| || |||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  22075025 atcgagccaactaatgaaccaatcgagtcgaactatatacagatcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcattt 22075124  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||| |||||||  ||||| |    ||||||||| |||| || | ||||||  ||||||||||||||||||||| |||||    
T  22075125 ggttcgtgaaccacgttcaacgagttaattgtcgaatcgagttctaaactattatcgagttggttcggttcattgccagcc 22075205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 175 - 347
Target Start/End: Original strand, 36926969 - 36927141
Alignment:
Q  175 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 274  Q
    ||||||||| || ||||| ||||||||| | ||  |||||| ||||||||||||||||||||||||||||| ||||||||| |  ||  || ||||||||    
T  36926969 atctcatgagcctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaatttttagctcaagtccaactcgttaggttcatg 36927068  T
Q  275 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  36927069 aaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 36927141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 167 - 346
Target Start/End: Complemental strand, 3930899 - 3930720
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||| ||| ||||| | ||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  3930899 atcgagccatctcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 3930800  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 346  Q
    |||||||| ||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| ||||    
T  3930799 ggttcatggaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgtttcggttcattgccagc 3930720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 7447572 - 7447721
Alignment:
Q  11 agaagaagagaaaacgttttatgttttagtggaattggaaaatggaataattattaaaggaattaaggaaatgaagactct---tatgctact--aagtg 105  Q
    |||||||||  |||| ||||||||||| || |||||||||||||||||||| ||||||||| ||||| |||||||| ||||   || |||| |  |||||    
T  7447572 agaagaagaagaaacattttatgttttggtagaattggaaaatggaataatgattaaaggagttaagcaaatgaaggctcttggtaggctaattaaagtg 7447671  T
Q  106 aaattcctacttcctagatggtggaacggatggataaaaagaaaaggaga 155  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||| |||||    
T  7447672 aaattcctacttcctagatagtggaacggatgggtaaaaataaatggaga 7447721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 28949941 - 28949761
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||| ||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||| ||||||| | | |||  ||     
T  28949941 atcgagtcatttcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaatttttagctcaattccagctcgtta 28949842  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| |||||    
T  28949841 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgccagcc 28949761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 48505971 - 48505852
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||| ||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | ||| |||     
T  48505971 atcgagccatctcatgtacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcatta 48505872  T
Q  267 ggttcatgaaccaaattcaa 286  Q
    |||||||||||||| |||||    
T  48505871 ggttcatgaaccaagttcaa 48505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 210 - 347
Target Start/End: Complemental strand, 17025501 - 17025364
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||| ||||| |   ||||| |||| |||||      
T  17025501 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaaccaagttcaacgagtcaattatcgaatcgaacc 17025402  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||| |||||||||||||||||||||| |||||    
T  17025401 ttgaactattttcgagttggttcggttcattgtcagcc 17025364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 181 - 328
Target Start/End: Complemental strand, 40480220 - 40480072
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggct-tatttggttcatgaacca 279  Q
    |||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||   ||||||||||||||||    
T  40480220 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgttttggttcatgaacca 40480121  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 328  Q
    | ||||| | || ||||  ||| |||| ||  ||||| |||||||||||    
T  40480120 agttcaacgaactaattaccgactcgagttccgaactttattcgagttg 40480072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 42072045 - 42072225
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  42072045 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 42072144  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||| ||| ||||| |||  |  | |||| |||||| |  ||||||| |||||||| |||||| ||||| |||||    
T  42072145 ggttcatgaatcaagttcaacggattagatatcgaatcgaatgtcaaactataatcgagttgtttcggtacattgtcagcc 42072225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 210 - 341
Target Start/End: Complemental strand, 18740358 - 18740227
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| || ||||   ||||| || | ||||||     
T  18740358 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtttaatgagtcaattatcaaatcgaatc 18740259  T
Q  310 ttgaactatattcgagttggttcggttcattg 341  Q
    | ||||||| ||||||||||||||||||||||    
T  18740258 tcgaactattttcgagttggttcggttcattg 18740227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 23237685 - 23237587
Alignment:
Q  182 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| |||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||| | | ||||||||||||| ||| ||||||||||||||    
T  23237685 gaacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 23237587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 44422086 - 44421904
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaactt-aattttcagctcaagttcggcttat 264  Q
    |||||||||| |||||||||||| ||| ||||||||| || |  |||||| || |||||||  ||||||||||| |||||||||||||||||| |||  |    
T  44422086 tatcgagccaactcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaaattttcagctcaagttcagctcgt 44421987  T
Q  265 ttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  44421986 ttggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgacagcc 44421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 209 - 347
Target Start/End: Complemental strand, 49034365 - 49034227
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| | ||||||||| || |||| ||||||||||| |||||||||| || |||||||||||||||||| ||||| | | |||||  ||| ||||||    
T  49034365 ttcaagttcgactcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgaaacaattaccgaatcgaat 49034266  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || ||||||| |||||||||| ||||||| ||| |||||    
T  49034265 ttcgaactattttcgagttggatcggttcgttgccagcc 49034227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 36472400 - 36472581
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||||||  ||||||||||||||| |||||| ||      ||||||| ||||| ||||| ||||||| ||||||||||| ||||||||||||| |||    
T  36472400 tatcgagccagttcatgaaccaaacgagtcgaaccatgctcggttcaagttcaacttatttatttaacgagcttaattttcaactcaagttcggctcatt 36472499  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||| | | || || |||| |||| | |  |  ||| |||||||||||||||||||||| |||||    
T  36472500 tggttcatgaaccaagttcaacgaatcatttatcgaatcgagtatcaagttattttcgagttggttcggttcattgtcagcc 36472581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 46573784 - 46573615
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||    || |||||| | ||||||||| ||||||| ||||||||||| || ||||||| || |||||||||||||||    
T  46573784 tcatgaaccaaacgagtcgaaccatactcaactcaagttcgactcatttatttaacgagcttaattttcaacttaagttcgactcatttggttcatgaac 46573685  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| |   ||||| |||| |||||| | ||| ||| || ||||||||||||||||||| |||||    
T  46573684 caagttcaacgagtcaattatcgaatcgaatctcgaattatttttgagttggttcggttcattgccagcc 46573615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 26216234 - 26216353
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||| |||||||||||||||||||||||||||||||| | |||  ||     
T  26216234 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcctttaattaacgaacttaattttcagctcaagtccagctcgtta 26216333  T
Q  267 ggttcatgaaccaaattcaa 286  Q
    ||||||| |||||| |||||    
T  26216334 ggttcataaaccaagttcaa 26216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 169 - 339
Target Start/End: Original strand, 10618885 - 10619055
Alignment:
Q  169 cgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttgg 268  Q
    ||||||| |||||||| |||  || ||||||||| || |  |||||| || |||||||| ||||||||||||||||||||||||||||| ||| |||| |    
T  10618885 cgagccagctcatgaagcaacagagtcgaactatatacagctcaagttcagctcatttatttaacgaacttaattttcagctcaagttcagctcatttag 10618984  T
Q  269 ttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcat 339  Q
    |||||||||||| ||||| |    ||||||||| |||| ||   ||||||  |||||||| ||||||||||    
T  10618985 ttcatgaaccaagttcaacgagttaattgtcgaatcgagttccaaactattgtcgagttgattcggttcat 10619055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 210 - 340
Target Start/End: Complemental strand, 21760723 - 21760593
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| ||||||||||| |||||||  ||| |||||| |||||||||| || ||||||||| ||||| || ||||| | | ||||| |||| |||| ||    
T  21760723 tcaagttcaactcatttatttaacgagtttagttttcaactcaagttcgactcatttggttcgtgaacaaagttcaacgaatcaattatcgaatcgagtt 21760624  T
Q  310 ttgaactatattcgagttggttcggttcatt 340  Q
    | ||||||| |||||||||||||||||||||    
T  21760623 tcgaactattttcgagttggttcggttcatt 21760593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 33935469 - 33935589
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||| || || ||| ||||||||| || |  |||||| || |||||||  ||||||||||||||||||||||||||||| |||  ||    
T  33935469 tatcgagccaactcatggactaaccgagtcgaactatataaagctcaagttcatctcatttgtttaacgaacttaattttcagctcaagttcagctcgtt 33935568  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    ||||||||||||||| |||||    
T  33935569 tggttcatgaaccaagttcaa 33935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 33124710 - 33124837
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||| |||||||||||||||||||||||||||||   | ||||||||||| |||||| ||||| |    ||||||||| |||| |||  ||||||     
T  33124710 ctcatttatttaacgaacttaattttcagctcaagttcaattcatttggttcataaaccaagttcaacgagttaattgtcgaatcgagtttcaaactatt 33124809  T
Q  320 ttcgagttggttcggttcattggcagcc 347  Q
     ||||||||||||||||||||| |||||    
T  33124810 gtcgagttggttcggttcattgccagcc 33124837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 222399 - 222229
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||| ||| ||||||||| || |  |||||| || |||||||  |||||||| ||||||||||| |||||||| |||  |||||||||||||    
T  222399 ctcatgaaccaaccgagtcgaactatataaagctcaagttcagctcatttgtttaacgaatttaattttcagttcaagttcagctcgtttggttcatgaa 222300  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||| |    ||||||||| || | |    ||||||  ||||||||||||||||||||| |||||    
T  222299 ccaaattcaacgagttaattgtcgaatcaagtcccaaactattgtcgagttggttcggttcattgccagcc 222229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 167 - 277
Target Start/End: Original strand, 15434205 - 15434315
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||| | ||||| ||||||||  | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  15434205 atcgagccatctcatgaagctaacgagtcgaactagatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 15434304  T
Q  267 ggttcatgaac 277  Q
    |||||||||||    
T  15434305 ggttcatgaac 15434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 23227171 - 23227009
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||| ||| || | |||| || || |||||| |  |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| ||    
T  23227171 tcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtac 23227072  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||| |||||    
T  23227071 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23227009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 23236324 - 23236162
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||| ||| || | |||| || || |||||| |  |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||| ||    
T  23236324 tcatgaaccaaccgagtcaagctatatacaactcaagttcggctcatttatttaacgaacttaattttcagctcaagttcagctcatttgattcatgtac 23236225  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||| |||||      ||||||||| |||| ||| |||||||  |||||||||||||| |||||    
T  23236224 caagttcaacaagataattgtcgaatcgagtttcgaactattgtcgagttggttcggatcatt 23236162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 229 - 347
Target Start/End: Original strand, 33019325 - 33019443
Alignment:
Q  229 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 328  Q
    |||||||  |||||||||| |||||||||| |||||||| ||| |||||||| ||||| | ||||||| |||| |||| | | ||||||| || ||||||    
T  33019325 ttaacgagtttaattttcaactcaagttcgacttatttgattcgtgaaccaagttcaacgaaccaattatcgaatcgagtatcgaactatttttgagttg 33019424  T
Q  329 gttcggttcattggcagcc 347  Q
    ||||||||||||| |||||    
T  33019425 gttcggttcattgtcagcc 33019443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 37401750 - 37401569
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| |||||| |||| ||||||| || |||||  ||||  |||| | || |||| ||| || |||||||||||||||| |||||||| |||| |||    
T  37401750 tatcgagtcatctcgtgaatcaaacgagtccaactacatatagctcaacttcagctcaattagttgacgaacttaattttcaactcaagtttggctcatt 37401651  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||| ||| |||||   | ||||| |||| |||||||  ||||| || |||| |||||| ||||||||| |||||    
T  37401650 tggttcatgaatcaagttcaacaaatcaattttcgaatcgaattacgaactctaatcgaattggtttggttcattgtcagcc 37401569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 48634408 - 48634528
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||| | |||||||| ||| ||| ||||||||| |  || |||| |  |||||||||| ||||||||||||||||| |||||||||||  || |||    
T  48634408 tatcgagctaactcatgaatcaaccgagtcgaactatattcaactcaattctaactcatttatttaacgaacttaatttttagctcaagttcaactcatt 48634507  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    ||||||||||||||| |||||    
T  48634508 tggttcatgaaccaagttcaa 48634528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 10096443 - 10096613
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||| |||||||  |||| ||| | || || |||| || |||||||| ||| ||||||||||||   | ||||||||  || ||||||||||||||    
T  10096443 ctcatgaatcaaacgagccgaattatatgtagtttaagttcagctcatttagttagcgaacttaatttctcgttcaagttcaactcatttggttcatgaa 10096542  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| ||| ||| || |||||||||||||| ||| ||||||| ||||| |||  || |||||||| |||||    
T  10096543 ccaagttcgatgaacaaattgtcgagtcgagtttcgaactatgttcgaattgcctcagttcattgccagcc 10096613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 23223622 - 23223561
Alignment:
Q  182 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatt 243  Q
    |||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23223622 gaacaaaacgagtcgaactatctataactcaagttcaactcatttaattaacgaacttaatt 23223561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 29037953 - 29037853
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||| ||||||| |||||| || |||| || || | ||||||||||  |||||| |||||||||||| |||||||||| || ||||||||||||||    
T  29037953 ctcatgaatcaaacgagtcgaaccatatatagtttaaattcaactcatttgtttaacggacttaattttcaactcaagttcgtctcatttggttcatgaa 29037854  T
Q  277 c 277  Q
    |    
T  29037853 c 29037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 17608717 - 17608787
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||| ||||||| ||| || ||||||||||||||||| |||||||||||| ||||||||||| ||||||    
T  17608717 tcaagttcaactcaattagttgacgaacttaattttcagatcaagttcggctcatttggttcatcaaccaa 17608787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 33171707 - 33171537
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||| ||| || |||||| || || |||||| |  |||||||| |||| |||||||||||| ||||||||||| ||| ||||||||||| ||    
T  33171707 ctcatgaaccaaccgagtcaaactatatacaactcaagttcggctcatttatttaatgaacttaatttttagctcaagttcagctcatttggttcataaa 33171608  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||| |||||      |||||||   |||| ||| |||||||  |||||||||||||| |||||| |||||    
T  33171607 tcaagttcaacaagataattgtcttatcgagtttcgaactattatcgagttggttcggatcattgccagcc 33171537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 32356934 - 32357103
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    |||||||||||| || ||||  |||  ||| || |||| |||||| |||| ||||||||||| ||||||| ||||| ||||||| |||| |||||||||     
T  32356934 tcatgaaccaaatgagtcgagttatacatagtttaagttcaactcgtttacttaacgaactttattttcaactcaaattcggctcatttagttcatgaat 32357033  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | |  |||| |||| |||| | | ||||||| ||  |||||||| ||||||||| |||||    
T  32357034 caagttcaacgaattaattatcgaatcgagtctcgaactatttttaagttggtttggttcattgtcagcc 32357103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 27231722 - 27231542
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||||||||| || |||||  ||||  | |||| |   ||| ||| || ||||||||||||||||| |||||||||||| ||||    
T  27231722 atcgagtcatctcatgaaccaaacgagtcaaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagttcaagttcggctcattt 27231623  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | | |||||| ||| ||| | | | ||||| |||| |||||||  ||||| || |  || ||||||||||||||| |||||    
T  27231622 gatacatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactctaattaagctggttcggttcattgtcagcc 27231542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 209 - 347
Target Start/End: Complemental strand, 35543694 - 35543559
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||| |   ||| ||||||||||| |||||||||| || |||| ||||||||||||| ||||| | | ||||| |||| | || |    
T  35543694 ttcaagttcaactcatttatt---cgagcttaattttcaactcaagttcgactcatttagttcatgaaccaagttcaacgaatcaattatcgaatggagt 35543598  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |  |||||| |||||||||||||| ||||||| |||||    
T  35543597 ctcaaactattttcgagttggttcgattcattgtcagcc 35543559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 220 - 336
Target Start/End: Complemental strand, 46652763 - 46652647
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||||||||| ||||||||| | || | |||||| || |||| |||||||||||||| | |||  ||  |||| |||| |||||||| ||||||||    
T  46652763 ctcatttaattaacaaacttaattcttagtttaagttcagcatattaggttcatgaaccaagtccaacagattaattatcgaatcgaatttcgaactata 46652664  T
Q  320 ttcgagttggttcggtt 336  Q
    ||||| ||||| |||||    
T  46652663 ttcgaattggtccggtt 46652647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 44994147 - 44994056
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 258  Q
    |||||| |||||||||||| ||| || ||||||||| || || |||| | || |||| ||| ||| ||||||||||||||||||||||||||    
T  44994147 atcgagtcatctcatgaacaaaatgagtcgaactatatacaactcaaattcagctcaattagttagcgaacttaattttcagctcaagttcg 44994056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 388988 - 389082
Alignment:
Q  247 agctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||||||| |||  || |||||||||||||| ||||| |||  || | |||||| |||| | |||||||| |||||||| ||||||||||||    
T  388988 agctcaagttcagctcgttaggttcatgaaccaagttcaacggattaaatatcgagttgaatgtcgaactataatcgagttgattcggttcattg 389082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 346
Target Start/End: Original strand, 31491790 - 31491956
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||| ||| || |||   ||| ||||||| ||||| ||||| |||||||||||||| || || | ||||||| || ||||||||||||   ||    
T  31491790 atgaaccaaacaaattgagctaaacatagttcaagttcaactaatttatttaacgaacttaatattgagtttaagttcgactcatttggttcatgtgtca 31491889  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 346  Q
    | ||||| | |  |||| |||| |||||| |  |||||| || |||||| |||||||||||| ||||    
T  31491890 agttcaacgaattaattatcgaatcgaatctcaaactatttttgagttgattcggttcattgtcagc 31491956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 37106853 - 37106962
Alignment:
Q  232 acgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggtt 331  Q
    |||||||||||||| ||||||||||||||| ||||||| ||| ||| || ||| | | |  |||| |||| |||||||  ||||| || | |||| ||||    
T  37106853 acgaacttaatttttagctcaagttcggctcatttggtacattaactaagttcgacgaattaattatcgaatcgaattacgaactctaattgagtcggtt 37106952  T
Q  332 cggttcattg 341  Q
    ||||||||||    
T  37106953 cggttcattg 37106962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 37250058 - 37250107
Alignment:
Q  229 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaacc 278  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  37250058 ttaacgaaattaattttcagctcaagtgcggctcatttggttcattaacc 37250107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 280
Target Start/End: Original strand, 37239840 - 37239908
Alignment:
Q  212 aagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| |||||||||| |||||| ||||| ||||| ||||||| |||  || ||||||||||||||||||    
T  37239840 aagttcaactcatttgattaacaaacttgattttaagctcaaattcatctcatttggttcatgaaccaa 37239908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 2466690 - 2466611
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagtt 256  Q
    |||||||||||| ||| ||||| ||  |||| || ||||  | |||||||| |||||||||| |||||||||||||||||    
T  2466690 ctcatgaaccaatcgagtcgaattacatatagtttaagtttagctcatttatttaacgaactaaattttcagctcaagtt 2466611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 29527401 - 29527438
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttc 257  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  29527401 ctcatttaattaacgaacttaatttacagctgaagttc 29527438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 9e-69; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 3801547 - 3801367
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| |||||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3801547 atcgagtcatctcatgaacctaacgaatcgaaccatttatagttcaagttcaactcatttaattaacgaacttaattttcagctcaagttcggctcattt 3801448  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  3801447 ggttcatgaaccaagttcaatgaaccaattgtcgagtcgaattacgaactatattcgagttggttcggttcattgccagcc 3801367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 38523035 - 38522864
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    ||||||||||| |||||||||||| ||||||| ||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  38523035 tctcatgaacccaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcagctcaagtttggctcatttggttcatga 38522936  T
Q  276 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||| ||||||||||||||| ||||||| ||||  |||||||||||||||||||||||||||||| |||||    
T  38522935 accaagttcaatggaccaattatcgagtcaaattacgaactatattcgagttggttcggttcattgccagcc 38522864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 31620825 - 31621005
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||  |||| |||||||||| ||||| ||| | ||| |||||| || ||||||||||||||||||||||| ||||||| ||||||  || |||     
T  31620825 atcgagccaagtcattaaccaaacgagtcgaattatatgtaactcaagttcagctcatttaattaacgaacttaatattcagctgaagttcaactcatta 31620924  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  31620925 ggttcatgaaccaaattcaatggactaattgtcgagtcgaatttcgaactatattcaagttggttcggttcattgtcagcc 31621005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 32157120 - 32156955
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||  |||||||||||| ||||||| ||||||| || |||||||||||||||||||||||||||| ||||||         |||    
T  32157120 atcgagtcatctcatgaacttaacgaatcgaaccatctatagttcaagttcagctcatttaattaacgaacttaattttcaactcaag---------ttt 32157030  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    || ||||||| ||| |||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  32157029 ggctcatgaaacaagttcaatggaccaattgtcaagtcgaattacgaactatattcgaattggttcggttcattg 32156955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 27906055 - 27906235
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||||||||||| || ||| | ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  27906055 atcgagccatctcatgagcctaacaagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 27906154  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  27906155 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27906235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 41783296 - 41783462
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||  ||||||||  ||||| |||||| ||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  41783296 tgaaccaaacgggtcgaactacatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcatttggttcatgaaccaa 41783395  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  41783396 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgtcagcc 41783462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 181 - 340
Target Start/End: Complemental strand, 14500875 - 14500716
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| |||| |||| ||||| |||||| ||||||||| | |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  14500875 tgaaccaaacgagtcgagctatatataactcaagttcaactcattcagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 14500776  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
     ||||| | || |||| ||||||||| ||  ||||| |||||||||||  ||||||||||    
T  14500775 gttcaacgaactaattatcgagtcgagttccgaactgtattcgagttgtatcggttcatt 14500716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 167 - 346
Target Start/End: Original strand, 18880149 - 18880328
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||| ||| ||||| | ||||||| | ||  |||||| || ||||||||||||||||||||||||||||||| |||| | |||  ||     
T  18880149 atcgagccatctcatgtacctaacgagttgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagcttaagtccagctcgtta 18880248  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 346  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| ||||    
T  18880249 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagc 18880328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 26218018 - 26218184
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||| ||||| ||||||  |||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  26218018 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 26218117  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||||| | || ||||  |||||||| ||  ||||| |||| ||||||  ||||||||||| |||||    
T  26218118 gttcaacgaactaattaccgagtcgagttccgaactttatttgagttgtatcggttcattgccagcc 26218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 27450753 - 27450584
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| |  | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||     
T  27450753 tcatgaaccaaacgagtcgaaccacatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 27450654  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||| | | ||||| |||| |||||| | | ||||| |||||||||||||||||||||| |||||    
T  27450653 caaattcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcattgccagcc 27450584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 166 - 341
Target Start/End: Complemental strand, 1840871 - 1840696
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| || ||||||||| |||  |||||||| || |  |||||| || |||||||| || |||||||||||||||||||||||||| ||| |||    
T  1840871 tatcgagccagcttatgaaccaaccgagccgaactatatacatctcaagttcagctcatttatttcacgaacttaattttcagctcaagttcagctcatt 1840772  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||||||||||| ||||| |    ||||||||| | || || ||||||||  |||||||||||||||||||||    
T  1840771 tggttcatgaaccaagttcaacgagttaattgtcgaattgagttctgaactattgtcgagttggttcggttcattg 1840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 20190767 - 20190594
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||||||||| ||||||||  ||||  |||||| || |||| |||   | ||||||||||||| ||||||||||||||| ||||    
T  20190767 atcgagtcatctcatgaaccaaacgattcgaactacatatagctcaagttcagctcaattaggcagcgaacttaattttgagctcaagttcggctcattt 20190668  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||| ||| | ||||| |||| |||||||  ||||| || | |||||||||||||||||||    
T  20190667 ggttcatgaaccaagttcgatgaatcaattatcgaatcgaattacgaact-taatagagttggttcggttcattg 20190594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 10493953 - 10494122
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| |||||||||| || ||||||||  |||||    
T  10493953 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggtttgtgaac 10494052  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | ||||||| | || |||||| |  |||||| || ||||||||||||||||||| |||||    
T  10494053 caagttcaacgaaccaattattgaatcgaatatcaaactatttttgagttggttcggttcattgccagcc 10494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 15933117 - 15933300
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatt---ttcagctcaagttcggctta 263  Q
    ||||||| | |||||||||||||||| |||||| |||||||  |||||| |  |||||||| ||||||||||||||    || |||||| ||||  || |    
T  15933117 atcgagctaactcatgaaccaaacgagtcgaaccatctatagctcaagttcggctcatttatttaacgaacttaatagtatttagctcatgttcaactca 15933216  T
Q  264 tttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || |||||||||||||| ||||| | |  || ||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  15933217 ttaggttcatgaaccaagttcaacgaattaactgtcgagtcgaatttcgaactatactcgagttggttcggttcattgccagcc 15933300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 178 - 340
Target Start/End: Original strand, 39407374 - 39407536
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||     
T  39407374 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaat 39407473  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||| ||||| | | ||||| |||| |||||| | | ||||| || ||||||||||||||||||    
T  39407474 caagttcaacgaatcaattatcgaatcgaatctcgcactatttttgagttggttcggttcatt 39407536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 20188937 - 20189110
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    |||||| |||||||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||| || |||||||||||| |||||||||||    
T  20188937 catctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcat 20189036  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| ||| | | | ||||| |||| || ||||  ||||| || |||||||| |||||||||||| |||||    
T  20189037 gaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttgattcggttcattgtcagcc 20189110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 27196077 - 27196214
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| |||||| ||||  |||||| ||||||||||| |||||||||| || ||||||||||||||||||||| || | | ||||| |||| |||| |     
T  27196077 tcaagttcaactcctttatctaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaatttaacgaatcaattatcgaatcgagtc 27196176  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  27196177 tcgaactattttcgagttggttcggttcattgtcagcc 27196214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 178 - 338
Target Start/End: Complemental strand, 30661079 - 30660919
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| ||||||||| |||| |||| || | |||||| |||||||| ||||||||||||| || || ||| ||| |||| ||||||||||    
T  30661079 tcatgaaccaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcaacttaaattcagctcatttagttcatgaac 30660980  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 338  Q
     || ||||||  | ||||| |||| |||| |||| ||||| ||||||||||||||| ||||    
T  30660979 taagttcaataaatcaattatcgaatcgagttttaaactaaattcgagttggttcgattca 30660919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 34719829 - 34719660
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || |||  |||||||||     
T  34719829 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaagttcatgaat 34719730  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | ||||| |||| || ||| | | ||||| |||||||||||||| ||||||| |||||    
T  34719729 caagttcaacgaatcaattatcgaatcaaatctcgcactattttcgagttggttcgtttcattgccagcc 34719660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 11136173 - 11136034
Alignment:
Q  183 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 282  Q
    |||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||| |||||||| |    
T  11136173 aaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttc-tgaaccaagt 11136075  T
Q  283 tcaatggaccaattgtcgagtcgaattttgaactatattcg 323  Q
    |||| | || ||||  |||||||| ||  ||||| ||||||    
T  11136074 tcaacgaactaattaccgagtcgagttccgaactttattcg 11136034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 19282298 - 19282178
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||| ||| |||||||| ||| ||| ||||||||| || | ||||||| || ||||| || ||||||||| ||||||||||||||||||| ||| |||    
T  19282298 tatcgaaccagctcatgaatcaaccgagtcgaactatatacagttcaagttcagctcatctacttaacgaacctaattttcagctcaagttcagctcatt 19282199  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    ||||||||||||||| |||||    
T  19282198 tggttcatgaaccaagttcaa 19282178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 177 - 341
Target Start/End: Original strand, 31021830 - 31021994
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||| |||||||  |||||||| ||||  | || | || |||||||| ||||| ||||||||||  ||||||| ||| ||| ||||||||||||||    
T  31021830 ctcatgaatcaaacgagacgaactatgtatagcttaaattcagctcatttagttaacaaacttaatttcaagctcaaattcagctcatttggttcatgaa 31021929  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||| |||| |    |||| ||||||||| ||  ||||||||||||||||||||||||||||||    
T  31021930 ccaaactcaacgagttaattatcgagtcgagttccgaactatattcgagttggttcggttcattg 31021994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 29328054 - 29328180
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||||||||||||||||||||||||||||||| | || | || |||||||||| ||| ||||| |||  || | ||||||||||| | ||||||||    
T  29328054 ctcatttaattaacgaacttaattttcagctcaagtccagc-tgttaggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactata 29328152  T
Q  320 ttcgagttggttcggttcattggcagcc 347  Q
     ||||||| ||||||||||||| |||||    
T  29328153 atcgagtttgttcggttcattgtcagcc 29328180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 26298279 - 26298448
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || || |||| ||||||||||| ||||||| ||||||||| | |||||||| | || ||| ||||||||||     
T  26298279 tcatgaaccaaacgagtcgaaccatatttagtttaagttcaactcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26298378  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | ||||| |||| |||||| |   ||||| || ||||||||||||||||||| |||||    
T  26298379 caagttcaacgaatcaattatcgaatcgaatctcacactatttttgagttggttcggttcattgccagcc 26298448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 2675987 - 2676146
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||| ||  |||| ||||||| ||| | | ||| || ||||||||||||||||||||||||||| || |||||||||||||||| |    
T  2675987 tgaaccaaacgagtcgaattacatatagttcaagttcaatttaattagttgacgaacttaattttcagctcaagttcgactcatttggttcatgaaccta 2676086  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
     ||| | | | |||||||||  |||||||  ||||| || |||| |||||| ||||||||    
T  2676087 gttcgacgaatcaattgtcggatcgaattacgaactttaatcgaattggtttggttcatt 2676146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 176 - 347
Target Start/End: Complemental strand, 32945195 - 32945024
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    |||||||||| |||||| | |||||||  |||| || ||| |  |||||||| || |||| |||||||||   |||||||||| || |||||||||||||    
T  32945195 tctcatgaacaaaacgagttgaactatgcataactccagttcggctcatttatttgacgagcttaatttttgactcaagttcgactcatttggttcatga 32945096  T
Q  276 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||| || || | | |||||  ||| |||| ||| ||||||| |||||||||||||||||||||| |||||    
T  32945095 accaagtttaacgaatcaattaccgaatcgagtttcgaactattttcgagttggttcggttcattgtcagcc 32945024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 178 - 340
Target Start/End: Original strand, 26299815 - 26299977
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||| ||||||| |||||| || | || ||||||| ||| ||||||| ||||||| ||||||||| | |||||||| | || ||| ||||||||||     
T  26299815 tcatgaatcaaacgagtcgaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaactcaagtttgactcattaggttcatgaat 26299914  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
     || ||||| | | ||||| |||| |||||| | | ||||| |||||||||||||||||||||    
T  26299915 gaagttcaacgaatcaattatcgaatcgaatctcgcactattttcgagttggttcggttcatt 26299977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 331
Target Start/End: Complemental strand, 40056493 - 40056382
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||| ||||||||||||||||||| ||||| ||   ||||||||||||||||||||||||||| |    ||||||||| ||||||||  ||||||     
T  40056493 ctcatttatttaacgaacttaattttcatctcaaatttaacttatttggttcatgaaccaaattcaacgagataattgtcgaatcgaatttcaaactatt 40056394  T
Q  320 ttcgagttggtt 331  Q
     |||||||||||    
T  40056393 atcgagttggtt 40056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 39409108 - 39409206
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | |||||||||| || ||| ||||||||||    
T  39409108 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaa 39409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 178 - 286
Target Start/End: Complemental strand, 34723825 - 34723717
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | ||||| |||| || ||| ||||||||||     
T  34723825 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaactcaaattcgactcattaggttcatgaat 34723726  T
Q  278 caaattcaa 286  Q
    ||| |||||    
T  34723725 caagttcaa 34723717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 34857315 - 34857478
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || || ||||  |||||||||| ||||||| ||||||||| | |||||||||| || ||| | ||||||||     
T  34857315 tcatgaaccaaacgagtcgaaccatatttagtttaagtttaactcatttatttaacgagcttaattttaaactcaagttcgactcattagattcatgaat 34857414  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| ||||| | | ||||| | || | |||| |   ||||| ||||||||||||||||||||||    
T  34857415 caagttcaacgaatcaattattgaattgaatctcacactattttcgagttggttcggttcattg 34857478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 43386694 - 43386769
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 252  Q
    |||||||||||||||| | |||| |||||||| |||||| ||| ||||||| |||| |||||||||||||||||||    
T  43386694 ctcatgaaccaaacgagttgaaccatctataactcaagttcaattcatttatttaaagaacttaattttcagctca 43386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 19716151 - 19716315
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| || ||| || | || ||||||| ||| ||||||| ||||||| ||||||||| | || ||||||| || ||| ||||||||||     
T  19716151 tcatgaaccaaacgagtcaaaccatatttagttcaagttcaattcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcatgaat 19716250  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | |||||      |||||| | | ||||| |||||||||||||||||||||| |||||    
T  19716251 caagttcaacgaatcaatt-----atcgaatctcgcactattttcgagttggttcggttcattgccagcc 19716315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 340
Target Start/End: Original strand, 39414140 - 39414312
Alignment:
Q  168 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagc-tcaagttcggcttattt 266  Q
    |||||||| ||||||||||||  || |||| |||| ||||| |||||| || |||||||| ||||||||||||||||| | | | |||||| ||| |||     
T  39414140 tcgagccagctcatgaaccaattgagtcga-ctatatataactcaagttcagctcatttatttaacgaacttaatttttaacttaaagttcagctcatta 39414238  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    |||||||| ||||| ||||| |    ||||||||| |  | ||| |||||||  ||||||||||||||||||||    
T  39414239 ggttcatggaccaagttcaacgagttaattgtcgaattaagtttcgaactattgtcgagttggttcggttcatt 39414312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 217 - 341
Target Start/End: Complemental strand, 34724887 - 34724763
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 316  Q
    ||||||||||| ||||||| ||||||||| | |||||||||| || ||| |||||||||| ||| ||||| | | ||||| || | |||||| |   |||    
T  34724887 caactcatttatttaacgagcttaattttaaactcaagttcgactcattaggttcatgaatcaagttcaacgaatcaattatcaaatcgaatctcacact 34724788  T
Q  317 atattcgagttggttcggttcattg 341  Q
    || ||| ||||||||||||||||||    
T  34724787 attttcaagttggttcggttcattg 34724763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 10327897 - 10328067
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||| |||||| |||||||||  |||  ||||||  || ||||||| ||  |||  ||||| |||  |||||||| |  | ||||||||||||||    
T  10327897 ctcatgaacaaaacgagtcgaactatacatagctcaagtttaattcatttatttgtcgagtttaatattcgactcaagtttgattcatttggttcatgaa 10327996  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||| ||||| | | |||||  ||| |||| |||||||| || |||||||||||||||||||||| |||||    
T  10327997 tcaagttcaacgaatcaattaccgaatcgagttttgaacaattttcgagttggttcggttcattgtcagcc 10328067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 36523719 - 36523886
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaac----gaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    |||||||||||||||||| ||||||  |||  |||||| || |||||||| |||||     ||||||||||| |  ||||||||| || |||||||||||    
T  36523719 tcatgaaccaaacgaatcaaactatacatagctcaagttcagctcatttatttaacaaattaacttaatttttaaatcaagttcgactcatttggttcat 36523818  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||| ||||||| | | ||| |||| || | | | | ||| ||||||||||  ||||||||||||    
T  36523819 gaaccaagttcaatgaatctattatcgaatcaagtctcggactttattcgagttaattcggttcattg 36523886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 4983475 - 4983402
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaag 254  Q
    |||||||||||||| ||||||  ||||| |||||| |||||| |||| |||||||||||||| || ||||||||    
T  4983475 tgaaccaaacgaattgaactacatataactcaagttcaactcctttagttaacgaacttaatctttagctcaag 4983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 309
Target Start/End: Original strand, 1225318 - 1225450
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||||||| ||||| |||   || ||||||| |   ||||||| || |||| ||||||||||| |||||||||| || ||||||||||| ||    
T  1225318 ctcatgaaccaaacgagtcgaattatacgtagttcaagttcggttcatttatttgacgagcttaattttcaactcaagttcgactcatttggttcataaa 1225417  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    | || ||||| | | ||||| |||| |||||||    
T  1225418 ctaagttcaacgaaacaattatcgaatcgaatt 1225450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Original strand, 3457793 - 3457861
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaatttt 245  Q
    |||||||||||||||| ||  ||||| ||||  |||||| ||||||||||| |||||||||||||||||    
T  3457793 ctcatgaaccaaacgagtcagactatatatagctcaagtccaactcatttatttaacgaacttaatttt 3457861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 30051422 - 30051502
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 258  Q
    |||||||| |||||| ||||||||| |||| |||| || | |||||| |||||||| ||||||||||||| ||||| ||||    
T  30051422 tcatgaactaaacgagtcgaactatatatagttcatgttcgactcatataattaacaaacttaattttcatctcaaattcg 30051502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 286
Target Start/End: Original strand, 24536014 - 24536083
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    |||||| |||| ||||||||||||||||| ||||||| ||  ||| ||||| ||||||||||| ||||||    
T  24536014 caactcgtttatttaacgaacttaattttgagctcaaatttagctcatttgattcatgaaccagattcaa 24536083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 28246731 - 28246798
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||| ||||||||||| |||| ||  |||||||||| |||||||||| || ||||||||| ||||    
T  28246731 ttcaagttcaactcatttatttaatgagtttaattttcaactcaagttcgactcatttggttcgtgaa 28246798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 117; Significance: 3e-59; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 165 - 341
Target Start/End: Complemental strand, 124666 - 124490
Alignment:
Q  165 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 264  Q
    ||||| || ||||||||||||||||||||||||| |||||||| ||||| | || |||||||||||||| ||||||||  |||||||||||||| || ||    
T  124666 atatcaagtcatctcatgaaccaaacgaatcgaaatatctatagttcaaattcagctcatttaattaacaaacttaataatcagctcaagttcgactcat 124567  T
Q  265 ttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  124566 ttggttcatgaaccaagttcaatggaccaattgtcgagtcaaatttcgaactatattcgagttggttcggttcattg 124490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 24470000 - 24469820
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  24470000 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 24469901  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  24469900 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 24469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 35810675 - 35810855
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| |  |||| ||| || |||||||||||||||||||||||||||||| ||||    
T  35810675 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcggctcaattatttgacgaacttaattttcagctcaagttcggctcattt 35810774  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| | | |||||||||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  35810775 ggttcatgaaccaagttcaacgaatcaattgtcgaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 35810855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 47603045 - 47602865
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  47603045 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 47602946  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  47602945 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgtcagcc 47602865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 32179822 - 32179995
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | ||| ||| |||| ||    
T  32179822 catctcatgaaccgaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcattaggtttat 32179921  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  32179922 gaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 32179995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 36419058 - 36419238
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||| |||||||| | ||| |||     
T  36419058 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcggctcaagtccagctcatta 36419157  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||| | |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  36419158 ggttcatgaaccaagttcgacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 36419238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 40159802 - 40159639
Alignment:
Q  178 tcatgaaccaaacgaatcgaactat-ctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||| |||||| || ||| | ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || ||||| ||||||||    
T  40159802 tcatgaaccaaacgagtcgaaccatacta-agttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttgattcatgaa 40159704  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||| | ||||| ||||||| |||| |||||| |  |||||| ||||||||||||||||||||||    
T  40159703 ccaagtccaatgaaccaattatcgaatcgaatatcaaactattttcgagttggttcggttcattg 40159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 167 - 342
Target Start/End: Original strand, 7596350 - 7596525
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||| ||||||| ||||||||  |||| ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  7596350 atcgagtcatctcatgaatcaaacgagtcgaactacatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 7596449  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattgg 342  Q
    ||||||| |||||| ||| | | | ||||| |||| || ||||  ||||| || ||||||||||||||||||||||    
T  7596450 ggttcataaaccaagttcgacgaatcaattatcgaatcaaattacgaactctaatcgagttggttcggttcattgg 7596525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 20347625 - 20347797
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| || || ||||||||||||| ||||| |||  ||| | ||| | || |||||||||||||||||||||||||||| || |||||||||| ||||    
T  20347625 atcgagtcaactgatgaaccaaacgagtcgaattat--atagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcattt 20347722  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| |||||| ||||||||| | |  |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  20347723 ggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 20347797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 42916297 - 42916123
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||||||||| |||| |||| |||  ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  42916297 atcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 42916198  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  42916197 ggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 42916123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 46265127 - 46264953
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||||||||| |||| |||| |||| ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  46265127 atcgagtcatctcatgaaccaaacgagtcgacctatatatagttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 46265028  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  46265027 agttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 46264953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 20349116 - 20349277
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||||| ||||| ||| |||| ||||| | || |||||||||||||||||||||||||||| || |||||||||| |||||||  ||||| ||    
T  20349116 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 20349215  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | ||||| | |  |||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  20349216 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 20349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 43087635 - 43087469
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| || || ||||||||||||  |||||||||||||||||    
T  43087635 tgaaccaaacgaatcgaactatatataactcaagttcaactcatttaattaacgaacttaatctttagttcaagttcggctcgtttggttcatgaaccaa 43087536  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |||||   || ||||  |||||||| ||  ||||| ||||| |||||  || |||||||| |||||    
T  43087535 gttcaacaaactaattaccgagtcgagttccgaactttattcaagttgtatcagttcattgtcagcc 43087469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 180 - 341
Target Start/End: Complemental strand, 45653601 - 45653441
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||| ||||||| ||||||||| |||| |||| || ||  |||||||  |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  45653601 atgaatcaaacgagtcgaactatatatagttcatgttcagttcatttagctaacgaacttaacttttagctcaagttcggctcatttggttcatgaacca 45653502  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | ||||| | |  ||||||||| |||| ||||||||||| |||||||||| |||||||||||    
T  45653501 agttcaacgaaataattgtcgaatcgagttttgaactattttcgagttgg-tcggttcattg 45653441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 181 - 341
Target Start/End: Original strand, 19508499 - 19508659
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||| | ||||||||| ||||| |||||  ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  19508499 tgaaccaaacaagtcgaactatatataactcaaggtcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 19508598  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  |||||||||||    
T  19508599 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattg 19508659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 166 - 341
Target Start/End: Complemental strand, 23915781 - 23915606
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| ||||| |||||| ||| ||||||||| || || |||||| ||||||||||| |||| ||||||||||||||||| |||||| ||| |||    
T  23915781 tatcgagccaactcattaaccaatcgagtcgaactatatacaactcaagttcaactcatttatttaatgaacttaattttcagctaaagttcagctcatt 23915682  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||||||||||| ||||| |    |||||| || |||| ||| ||||| |  ||||||||||||| |||||||    
T  23915681 tggttcatgaaccaagttcaacgagataattgttgaatcgagtttcgaacttttgtcgagttggttcgattcattg 23915606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 15306449 - 15306630
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  |||||| |  |||||||| |||| ||||||||||||| |||||||||| ||| |||    
T  15306449 tatcgagtcagctcatgaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaatgaacttaattttccgctcaagttcagctcatt 15306548  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||||| |  |||| |||| |||| ||  |||||||  || |||||||||||||||||| |||||    
T  15306549 tggttcatgaaccaagttcaatgaattaattatcgaatcgagttccgaactattgtcaagttggttcggttcattgccagcc 15306630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 174 - 347
Target Start/End: Complemental strand, 25125061 - 25124888
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    |||||| ||||||||||||   ||||||  ||||  |||||| || |||| ||| || ||||| |||||||||||||||||||||||| |||||||||||    
T  25125061 catctcgtgaaccaaacgagctgaactacatatagctcaagttcagctcaattagttcacgaaattaattttcagctcaagttcggctcatttggttcat 25124962  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| ||||| | | ||||| || | |||||||  ||||| || ||||||||||||||||||||| |||||    
T  25124961 gaaccaagttcaacgaatcaattatcaaatcgaattacgaactttaatcgagttggttcggttcattgccagcc 25124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 29677691 - 29677522
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||| ||||||| |||||||||   || ||||||| || |||||||| |||| || ||||||||||| |||||||||| || ||||||||| |||||    
T  29677691 tcatgaagcaaacgagtcgaactatacttagttcaagttcagctcatttatttaaagagcttaattttcaactcaagttcgactcatttggttcgtgaac 29677592  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | ||||||| || | |||| | | ||||||| |||||||||||||||||||||| |||||    
T  29677591 caagttcaacgaaccaattatcaaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 29677522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 7702792 - 7702972
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| |||||||||||| ||||| | ||| |||   ||  | |||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  7702792 atcgagctatctcatgaacctaacgagtagaattatgcgtagcttaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 7702891  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | |||||||||||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  7702892 gcttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 7702972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 23916767 - 23916947
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| ||||||||  |||   |||||| || |||| ||| || ||||||||||||||||||||||||| |||| ||||    
T  23916767 atcgagtcatctcgtgaaccaaacgagtcgaactacatattgctcaagttcagctcaattagttgacgaacttaattttcagctcaagttaggctcattt 23916866  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| ||||||||| ||  ||| | ||||| |||| |||||||  ||||| || ||||||||||| ||||||||| |||||    
T  23916867 ggttaatgaaccaagtttgatgaatcaattatcgaatcgaattacgaactttaatcgagttggtttggttcattgtcagcc 23916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 37441369 - 37441189
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||||| |||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  37441369 atcgagacatctcattaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 37441270  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | |||||| |||| | |||||||| || ||||| |||||||||||| |||||    
T  37441269 ggttcatgaaccaagttcaacggattagatatcgagttgaatgtcgaactataatctagttgattcggttcattgccagcc 37441189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 215 - 347
Target Start/End: Original strand, 44596522 - 44596654
Alignment:
Q  215 tacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaa 314  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||| |    ||||||||| |||| ||   ||    
T  44596522 tacaactcatttatttaacgaacttaattttcagttcaagttcagctcatttggttcatgaaccaaattcaacgagttaattgtcgaatcgagttccaaa 44596621  T
Q  315 ctatattcgagttggttcggttcattggcagcc 347  Q
    ||||  ||||||||||||||||||||| |||||    
T  44596622 ctattgtcgagttggttcggttcattgccagcc 44596654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 168 - 347
Target Start/End: Complemental strand, 13645362 - 13645183
Alignment:
Q  168 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttg 267  Q
    ||||||||  |||||||||||| || ||||||||| ||||| |||| | ||||||||||| |||||||||||||| || |||||||||||||||  ||||    
T  13645362 tcgagccagttcatgaaccaaatgagtcgaactatatataactcaaattcaactcatttacttaacgaacttaatctttagctcaagttcggctcgtttg 13645263  T
Q  268 gttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |||||||||||| || |||| || ||||  |||||||| ||   |||| ||||| |||||  | |||||||||||||||    
T  13645262 attcatgaaccaagttaaatgaactaattaccgagtcgagttccaaactttattcaagttgtcttggttcattggcagcc 13645183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 210 - 341
Target Start/End: Original strand, 28006350 - 28006481
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| | ||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| ||||| |   ||||| |||| ||||||     
T  28006350 tcaagttcgactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagttcaacgagtcaattatcgaatcgaatc 28006449  T
Q  310 ttgaactatattcgagttggttcggttcattg 341  Q
    | ||||||| ||||||||||||||||||||||    
T  28006450 tcgaactattttcgagttggttcggttcattg 28006481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 178 - 340
Target Start/End: Complemental strand, 5204641 - 5204479
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||    ||||||||| | ||||||||| ||||||||||||||||||| |||||||||| || |||||||||| ||||    
T  5204641 tcatgaaccaaacgagtcgaaccatactcaattcaagttcgactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcacgaac 5204542  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||| ||||| |   ||||| |||| |||||| |  |||||| |||||||||||||| ||||||    
T  5204541 caagttcaacgagtcaattatcgaatcgaatctcaaactattttcgagttggttcgattcatt 5204479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 217 - 347
Target Start/End: Complemental strand, 15257304 - 15257174
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 316  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| |||| | |  ||||    
T  15257304 caactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcaaact 15257205  T
Q  317 atattcgagttggttcggttcattggcagcc 347  Q
    || || ||||||||||||||||||| |||||    
T  15257204 atttttgagttggttcggttcattgtcagcc 15257174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 42937038 - 42937211
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    |||||| |||||||||||| | |||||||  |||  |||||| || |||| ||| || |||||||||||||| ||||||||||||||| ||||| |||||    
T  42937038 catctcgtgaaccaaacgagttgaactatacatagctcaagttcagctcaattagttgacgaacttaattttaagctcaagttcggctcatttgattcat 42937137  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||| ||| | | | ||||||| || |||||||  ||||| || |||||||||||| |||||||| |||||    
T  42937138 gaaccaagttcgacgaatcaattgttgaatcgaattacgaactctaatcgagttggttcagttcattgccagcc 42937211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 31869550 - 31869670
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||| ||| ||||| ||| || |  |||||| |  |||||||| |||||||||||||||||||||| |||||||||| |||    
T  31869550 tatcgagccagctcatgaaccaaccgagtcgaattatatacagctcaagttcggctcatttatttaacgaacttaattttcagcttaagttcggctcatt 31869649  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    ||||||||||||||| |||||    
T  31869650 tggttcatgaaccaagttcaa 31869670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 232 - 347
Target Start/End: Complemental strand, 14578703 - 14578588
Alignment:
Q  232 acgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggtt 331  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||   | |||||||| | |||||||  ||||| || |||||||||||    
T  14578703 acgaacttaattttcagctccagttcggctcatttggttcatgaaccaagttcaacaaatcaattgtctaatcgaattacgaactctaatcgagttggtt 14578604  T
Q  332 cggttcattggcagcc 347  Q
    |||||||||| |||||    
T  14578603 cggttcattgtcagcc 14578588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 39802940 - 39802770
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||||||||||| ||||  |||  |||||| |  |||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  39802940 ctcatgaaccaaacgaatcgagctatacatagctcaagttcggctcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaa 39802841  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||  ||||| | |  || || |||  ||| | | ||||||| |||||||||||||| ||||||| |||||    
T  39802840 ccatgttcaacgaattaactgccgaaccgagtctcgaactattttcgagttggttcgattcattgccagcc 39802770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 209 - 347
Target Start/End: Original strand, 50447340 - 50447478
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||| |||||| || || | |  |||| |||| |||| |    
T  50447340 ttcaagttcaactcatttatttaacgaacttaattttaagttcaagttcggctcatttggttcataaaccaagtttaacgaattaattatcgaatcgagt 50447439  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     | ||||||| |||||||||||| ||||||||| |||||    
T  50447440 ctcgaactattttcgagttggtttggttcattgtcagcc 50447478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 36119028 - 36119208
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||||||||||||| ||| |||| ||||||| || ||| |||| ||||| ||||| | ||| | ||||||||| | | |||    
T  36119028 tatcgagccaactcatgaaccaaacgaatcgaattatatatagttcaagttcagctcgtttagttaacaaacttca-tttgaactcaagttcagttcatt 36119126  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||| |||||| ||| | |    ||||||||| |||||||| ||||||| ||  |||||||||||||||||| |||||    
T  36119127 tggttcataaaccaagttcgacgagaaaattgtcgaatcgaatttcgaactattttttagttggttcggttcattgtcagcc 36119208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 38061350 - 38061181
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| || | || ||||||| ||||||||||| ||||||| ||||||||| | || ||||||| || ||| ||||||| ||     
T  38061350 tcatgaaccaaacgagtcgaaccatatttagttcaagttcaactcatttatttaacgagcttaattttaaacttaagttcgactcattaggttcataaat 38061251  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | | ||||| || | |||||| | | ||||| |||||||||||||||||||||| |||||    
T  38061250 caagttcaacgaatcaattatcaaatcgaatctcgcactattttcgagttggttcggttcattgccagcc 38061181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 209 - 341
Target Start/End: Original strand, 7956323 - 7956455
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||||||||||| ||||| | |||||||||||  ||||||||| || |||| ||||||||||||| | ||||| ||||||| |||| | || |    
T  7956323 ttcaagttcaactcatttatttaacaagcttaattttcaattcaagttcgactaattttgttcatgaaccaagtccaatgaaccaattatcgaattgagt 7956422  T
Q  309 tttgaactatattcgagttggttcggttcattg 341  Q
     | ||||||| ||||||||||||||||||||||    
T  7956423 atcgaactattttcgagttggttcggttcattg 7956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 180 - 347
Target Start/End: Complemental strand, 45581178 - 45581011
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||||| |||||| || ||||  | | || || |||||||| |||| ||||||||||||| ||||||||||  || |||||||||||||||||    
T  45581178 atgaaccaaacgagtcgaaccatatatagctaatgttcatctcatttagttaatgaacttaattttccgctcaagttcaactcatttggttcatgaacca 45581079  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | ||||| |    |||| |||| |||| ||| ||||||| ||| |||||||||||||||||| |||||    
T  45581078 agttcaacgagataattatcgaatcgagtttcgaactattttcaagttggttcggttcattgtcagcc 45581011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 241 - 347
Target Start/End: Complemental strand, 12224684 - 12224578
Alignment:
Q  241 attttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||| |    ||||||||| |||||||  |||||||  ||||||||||||||||||||    
T  12224684 attttcagctcaagttcggctcatttggttcatgaaccaagttcaacgagttaattgtcgaatcgaattccgaactattgtcgagttggttcggttcatt 12224585  T
Q  341 ggcagcc 347  Q
    | |||||    
T  12224584 gtcagcc 12224578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 15014325 - 15014446
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||| |||||| | |||||||||||||| ||||||||||||| |||||||||||||| ||| ||| | | | ||||| |||| |||||||  ||||| ||    
T  15014325 ctcaattaattgatgaacttaattttcaactcaagttcggctcatttggttcatgaatcaagttcgacgaatcaattatcgaatcgaattacgaactcta 15014424  T
Q  320 ttcgagttggttcggttcattg 341  Q
     |||||||||||||||||||||    
T  15014425 atcgagttggttcggttcattg 15014446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 24575909 - 24576046
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| | ||||||||| ||||| | ||||||||||| ||||||||||  | |||||||||||||||||| ||||| |   ||||| |||| || |||     
T  24575909 tcaagttcgactcatttatttaacaagcttaattttcaactcaagttcgtttcatttggttcatgaaccaagttcaacgagtcaattatcgaatcaaatc 24576008  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  24576009 tcgaactattttcgagttggttcggttcattgtcagcc 24576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 176 - 341
Target Start/End: Original strand, 31816534 - 31816699
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    |||| |||||||||||| ||||| |||| |||| |||||| |  |||||||| || |||| ||||||||||  || ||||||  || |||||||||||||    
T  31816534 tctcgtgaaccaaacgagtcgaattatccataactcaagttcggctcatttatttgacgagcttaattttcgactgaagttcaactcatttggttcatga 31816633  T
Q  276 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||| ||||| | | |||||  ||| | || ||| ||||||| ||||||||||||||||||||||    
T  31816634 accaagttcaacgaatcaattaccgaattgagtttcgaactattttcgagttggttcggttcattg 31816699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 47983223 - 47983386
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||| ||   ||| | |||| ||||||||||| |||||||  |||  ||| | |||||||||| || ||||||||| |||||    
T  47983223 tcatgaaccaaacgagtcgaaccatacttaacttaagttcaactcatttatttaacgagtttagattttaactcaagttcgactcatttggttcgtgaac 47983322  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| |||||   | ||||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  47983323 caagttcaacaaatcaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 47983386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 348
Target Start/End: Original strand, 15662906 - 15663087
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||||||||||||| || ||||||||  ||||  | |||| |   ||| ||| || |||||||||||||||||||||||||||||| ||||    
T  15662906 atcgagtcatctcatgaaccaaaagagtcgaactacatatagcttaagttcggttcaattagttgacgaacttaattttcagctcaagttcggctcattt 15663005  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcct 348  Q
    ||| |||||||||| ||| | | | ||||| | || | |||||   |||| || | ||||||||||||||||||| ||||||    
T  15663006 ggtacatgaaccaagttcgacgaatcaattattgaattgaattacaaactctaattgagttggttcggttcattgtcagcct 15663087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 276
Target Start/End: Original strand, 40002851 - 40002960
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||| ||||||| ||||||||  ||||  |||||| ||||||| ||| || |||||||||||||||| ||||||||||||| ||||    
T  40002851 atcgagtcatctcgtgaatcaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcaactcaagttcggctcattt 40002950  T
Q  267 ggttcatgaa 276  Q
    | ||||||||    
T  40002951 gattcatgaa 40002960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 206 - 341
Target Start/End: Original strand, 7995967 - 7996102
Alignment:
Q  206 taattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcg 305  Q
    ||||||||||  | |||||||| ||||||| ||||||||| | || ||||||| || ||| |||| ||||||||| ||||| | | ||||| |||| |||    
T  7995967 taattcaagttgagctcatttatttaacgagcttaattttaaacttaagttcgactcattaggtttatgaaccaagttcaacgaatcaattatcgaatcg 7996066  T
Q  306 aattttgaactatattcgagttggttcggttcattg 341  Q
    ||| | ||||||| ||| ||||||||||||||||||    
T  7996067 aatctcgaactattttcaagttggttcggttcattg 7996102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 229 - 347
Target Start/End: Complemental strand, 7016196 - 7016078
Alignment:
Q  229 ttaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttg 328  Q
    ||||| |||||| |||| ||||||||||| ||| |||||||||||||||||| |||||   | |||||||||| |||| | | ||| | | |||||||||    
T  7016196 ttaacaaacttagttttgagctcaagttcagctcatttggttcatgaaccaagttcaacaaatcaattgtcgaatcgagtctcgaattttgttcgagttg 7016097  T
Q  329 gttcggttcattggcagcc 347  Q
    ||||||||||||| |||||    
T  7016096 gttcggttcattgtcagcc 7016078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 29113707 - 29113535
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| | |||||||||||||||| | |||||||  |||  |||||| || ||| |||| ||  | |||||||||||||| |||| ||| || |||||    
T  29113707 atcgagctaactcatgaaccaaacgagttgaactatacatagctcaagttcacctctttta-ttggcaaacttaattttcagttcaaattcagcctattt 29113609  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    |||||||||||||| ||||| | | |||||| | | | || ||||||||| |||| ||||||||| ||||||||    
T  29113608 ggttcatgaaccaagttcaacgaatcaattgccaaattgagttttgaactttatttgagttggtttggttcatt 29113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 218 - 329
Target Start/End: Complemental strand, 33233682 - 33233574
Alignment:
Q  218 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaacta 317  Q
    ||||| |||| ||||||| |||||||||||||||||||||  |||||||| |||||||| ||| |||   | |  |||||||||||| ||||||||||||    
T  33233682 aactcgtttagttaacgaccttaattttcagctcaagttcaacttatttgattcatgaatcaatttc---gaattaattgtcgagtcaaattttgaacta 33233586  T
Q  318 tattcgagttgg 329  Q
    | ||||||||||    
T  33233585 tgttcgagttgg 33233574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 230 - 341
Target Start/End: Complemental strand, 21680776 - 21680665
Alignment:
Q  230 taacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttgg 329  Q
    |||||||||||||||| ||||||||||||||| ||||  ||||| |||||| ||||| |    |||| |||| |||| ||| ||||||| |||||| |||    
T  21680776 taacgaacttaatttttagctcaagttcggctcatttcattcataaaccaagttcaacgagataattatcgaatcgagtttcgaactattttcgagctgg 21680677  T
Q  330 ttcggttcattg 341  Q
    ||||||||||||    
T  21680676 ttcggttcattg 21680665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 209 - 347
Target Start/End: Complemental strand, 27076656 - 27076518
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| |||||| |||| ||||||||||||| ||| ||||||||||||||| |||| ||||||| ||||| ||||| | |  |||| |||| || | |    
T  27076656 ttcaagttcaactcgtttatttaacgaacttaactttgagctcaagttcggctcatttagttcatggaccaagttcaacgaattaattatcgaatcaagt 27076557  T
Q  309 tttgaactatattcgagttggttcggttcattggcagcc 347  Q
     || |||||| ||| |||||||||  ||||||| |||||    
T  27076556 cttaaactattttcaagttggttcaattcattgtcagcc 27076518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 14101876 - 14101994
Alignment:
Q  224 tttaattaacgaacttaatttt-cagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattc 322  Q
    |||| |||||||| |||||||| |||||||| ||| ||| ||||||||||||||| || |||||||    ||||||||| |||| ||| |||||||  ||    
T  14101876 tttatttaacgaatttaatttttcagctcaaattcagctcatttggttcatgaactaagttcaatgagataattgtcgaatcgagtttggaactattatc 14101975  T
Q  323 gagttggttcggttcattg 341  Q
     ||||||||||| ||||||    
T  14101976 aagttggttcggatcattg 14101994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 210 - 287
Target Start/End: Complemental strand, 14770656 - 14770579
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaat 287  Q
    |||||| || |||| ||| || |||||||||||||| || |||||||||||| ||||||||||| |||||| ||||||    
T  14770656 tcaagttcagctcaattagttcacgaacttaatttttagatcaagttcggctcatttggttcataaaccaagttcaat 14770579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 14796572 - 14796657
Alignment:
Q  194 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||| |||| |  |||| ||||||||||| ||||||||||||||||  || ||||||||  |||| |||||||||||||||    
T  14796572 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaacca 14796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 279
Target Start/End: Original strand, 14805446 - 14805531
Alignment:
Q  194 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||| |||| |  |||| ||||||||||| ||||||||||||||||  || ||||||||  |||| |||||||||||||||    
T  14805446 tcgaactatatatagtcaaagttcaactcatttatttaacgaacttaatttaaagttcaagttcaacttaattggttcatgaacca 14805531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 347
Target Start/End: Original strand, 6413272 - 6413376
Alignment:
Q  243 tttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattgg 342  Q
    ||||| ||||||||||  | |||||||||||||||||  ||||| | | ||||| || | |||||| | ||||||| |||||||||||||| |||||||     
T  6413272 tttcaactcaagttcgattcatttggttcatgaaccaggttcaacgaatcaattatcaaatcgaatctcgaactattttcgagttggttcgattcattgc 6413371  T
Q  343 cagcc 347  Q
    |||||    
T  6413372 cagcc 6413376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 286
Target Start/End: Original strand, 11991256 - 11991348
Alignment:
Q  194 tcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    ||||||||| |||| || |||| ||  ||||||| ||||||||| |||||||||  | ||||||  |||||||||||||||||||| ||||||    
T  11991256 tcgaactatatatagtttaagttcagttcatttagttaacgaacataattttcaatttaagttcatcttatttggttcatgaaccatattcaa 11991348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 48575247 - 48575144
Alignment:
Q  183 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 282  Q
    |||||||||  |||||||||   ||| |||||| ||||||||||| || |||||||||||||| |  |||||||||  |  ||||||||||||||||| |    
T  48575247 aaccaaacgggtcgaactatacttaactcaagttcaactcatttatttgacgaacttaattttaaattcaagttcgattcgtttggttcatgaaccaagt 48575148  T
Q  283 tcaa 286  Q
    ||||    
T  48575147 tcaa 48575144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 347
Target Start/End: Original strand, 7841665 - 7841759
Alignment:
Q  252 aagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||| | |||||||||||||||||| ||||| | |  |||| |||| |||| | | ||| ||| |||||||||||||||||||||| |||||    
T  7841665 aagttcggttcatttggttcatgaaccaagttcaacgaattaattatcgaatcgagtctcgaa-tattttcgagttggttcggttcattgacagcc 7841759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 273
Target Start/End: Complemental strand, 8828398 - 8828303
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||| ||||||| ||||| ||| | ||  |||||| ||||| ||||| |||||  ||||||||||||||||||||||   | |||||||||||    
T  8828398 tcatgaatcaaacgagtcgaattatgtctagctcaagttcaacttatttagttaacagacttaattttcagctcaagttcaattcatttggttcat 8828303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 30251437 - 30251500
Alignment:
Q  223 atttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    ||||| ||||||||||||||||| |||||||||||   | |||| |||||||||||||| ||||    
T  30251437 atttagttaacgaacttaatttttagctcaagttcaattcatttagttcatgaaccaaactcaa 30251500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 349
Target Start/End: Complemental strand, 572550 - 572417
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggctta-tttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaac 315  Q
    |||||||||||||||||||| || ||||| || | || ||||||| | |||||||  |||||||| |||||   | ||||| ||||||||| | | ||||    
T  572550 caactcatttaattaacgaattttatttttagtttaaattcggctcattttggtttttgaaccaagttcaacaaatcaattatcgagtcgagtctcgaac 572451  T
Q  316 tatattcgagttggttcggttcattggcagccta 349  Q
    | | |||||||| | ||| ||||||| |||||||    
T  572450 tttgttcgagtttgctcgattcattgtcagccta 572417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 1e-40; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 170 - 347
Target Start/End: Original strand, 33831455 - 33831632
Alignment:
Q  170 gagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggt 269  Q
    ||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||    
T  33831455 gagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggt 33831554  T
Q  270 tcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  33831555 tcatgaaccaaattcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 33831632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 181 - 341
Target Start/End: Complemental strand, 2647143 - 2646983
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  2647143 tgaaccaaacgagtcgaactatatataactcaagttcaacttatttagttaacgaacttaatttttagctcaagttcggctcgtttggttcatgaaccaa 2647044  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     ||||| | || ||||  |||||||| || |||||| |||| ||||||  |||||||||||    
T  2647043 gttcaacgaactaattaccgagtcgagttctgaactttatttgagttgtatcggttcattg 2646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 26436311 - 26436484
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || ||||||||||||||||||||||||||||||||| |||| |||  ||     
T  26436311 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcacgttcagctcgtta 26436410  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | |||||||||| | | || |||| |||||||||||||||||||||    
T  26436411 ggttcatgaaccaagttcaacggattaaatatcgagtcgaa-tgtcaattataatcgagttggttcggttcattg 26436484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 174 - 347
Target Start/End: Original strand, 27634635 - 27634808
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    ||||||||||||| ||||| || |||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  || |||||||    
T  27634635 catctcatgaacctaacgagtcaaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcat 27634734  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| || ||||| |||  || | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  27634735 gaactaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 27634808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 3409372 - 3409191
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||| ||| ||| ||||||||| || |  |||| | || |||||||| ||||||||||||||||||||||||||||| | | |||    
T  3409372 tatcgagtcagctcatgaatcaatcgagtcgaactatatacagctcaaattcagctcatttatttaacgaacttaattttcagctcaagttcagttcatt 3409273  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||| |    ||||||||| |||| ||| |||||||  ||||||||||||||||||||| |||||    
T  3409272 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattgccagcc 3409191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 36538613 - 36538793
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||| ||||| ||||||||| | ||  ||||||  | |||||||||||||||||||||||||||||||||||| |  ||  ||     
T  36538613 atcgagtcatctcatgaacctaacgagtcgaactatatgtagctcaagtttagctcatttaattaacgaacttaattttcagctcaagtccaactcgtta 36538712  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  36538713 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcc 36538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 41959100 - 41959280
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||||||||||| |||| ||||| ||||||||| | ||  | | || || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  41959100 atcgagccatctcattaacctaacgagtcgaactatatgtagcttatgttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 41959199  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||| ||| ||||| |||  |  | ||||||||||| | |||||||| |||||||| |||||||||||| |||||    
T  41959200 ggttcatgaatcaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttgattcggttcattgtcagcc 41959280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 338
Target Start/End: Original strand, 34064662 - 34064833
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||| |||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  34064662 atcgaaccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 34064761  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 338  Q
    ||||||||||| || ||||| |||  |  | | ||||||||| | |||||||| | ||||||||||||||||    
T  34064762 ggttcatgaactaagttcaacggattagatattgagtcgaatgtcgaactataattgagttggttcggttca 34064833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 174 - 309
Target Start/End: Complemental strand, 38409747 - 38409612
Alignment:
Q  174 catctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcat 273  Q
    |||||| ||||||||||||  |||||||| |||| || |||| || |||| ||| || || ||||||||||||||||||||||||||| |||||||||||    
T  38409747 catctcgtgaaccaaacgagccgaactatatatagttaaagttcagctcaattagttcacaaacttaattttcagctcaagttcggctcatttggttcat 38409648  T
Q  274 gaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    ||||||||||| | | | |||||||||| |||||||    
T  38409647 gaaccaaattcgacgaatcaattgtcgaatcgaatt 38409612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 40458889 - 40459058
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||    
T  40458889 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 40458988  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| |||||   ||||||| | || |||| | |  |||||| ||| |||||||||||||||||| |||||    
T  40458989 caagttcaacaaaccaattattgaatcgagtatcaaactattttcaagttggttcggttcattgtcagcc 40459058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 175 - 347
Target Start/End: Original strand, 11027873 - 11028045
Alignment:
Q  175 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 274  Q
    ||||| |||||||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||| || |||||||||||| ||||||||||||    
T  11027873 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaatttttagttcaagttcggctcatttggttcatg 11027972  T
Q  275 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||| ||| | | | ||||| |||| | |||||  ||||| || | ||||||||||||||||||| |||||    
T  11027973 aaccaagttcgacgaatcaattatcgaattgaattacgaactctaattgagttggttcggttcattgccagcc 11028045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 183 - 347
Target Start/End: Original strand, 30713129 - 30713293
Alignment:
Q  183 aaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaat 282  Q
    |||||||||| |||||||   ||||  |||||| ||||||| ||| || |||||||||| |||||||||| |||||||| |||||||||||||||||| |    
T  30713129 aaccaaacgagtcgaactgcatatagctcaagttcaactcaattagttgacgaacttaaatttcagctcatgttcggctcatttggttcatgaaccaagt 30713228  T
Q  283 tcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || | | | ||||| |||| |||||||  ||||  || ||||||||||||||||||||| |||||    
T  30713229 tcgacgaatcaattatcgaatcgaattacgaacactaatcgagttggttcggttcattgccagcc 30713293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 205 - 347
Target Start/End: Complemental strand, 27464717 - 27464575
Alignment:
Q  205 ataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtc 304  Q
    ||||||||||| |||||| |||| |||  ||||||||||||||  ||||||||| || ||||||||||||||||||||||||   | ||||| |||| ||    
T  27464717 ataattcaagtccaactcctttatttagggaacttaattttcaattcaagttcgactcatttggttcatgaaccaaattcaacaaatcaattatcgaatc 27464618  T
Q  305 gaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     | | | ||||||| |||||||||||||||||||||| |||||    
T  27464617 aagtctcgaactattttcgagttggttcggttcattgtcagcc 27464575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 180 - 348
Target Start/End: Complemental strand, 11007142 - 11006976
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||||| ||||| |||   || ||||||| ||||||||||| ||||||| ||||||||||| |||||||||| || ||||||||| |||||||    
T  11007142 atgaaccaaacgagtcgaattatacttatttcaagttcaactcatttatttaacgagcttaattttcaactcaagttcgactcatttggttcgtgaacca 11007043  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcct 348  Q
    | ||||| | | ||||| |||  ||||   |  |||||| |||||||||||||||||||||| ||||||    
T  11007042 agttcaacgaatcaattatcggatcga--gtcaaactattttcgagttggttcggttcattgtcagcct 11006976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 175 - 347
Target Start/End: Complemental strand, 27902613 - 27902442
Alignment:
Q  175 atctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 274  Q
    ||||| |||||||||||| ||||||||  ||||  |||||| ||||||| ||| || ||||  |||||||||||||||||||||| | |||| |||||||    
T  27902613 atctcgtgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgat-ttaattttcagctcaagttcggttcattttgttcatg 27902515  T
Q  275 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||| ||| | | | |||||||||| |||| ||  ||||| || |||||||||||||||||| || |||||    
T  27902514 aaccaagttcgacgaatcaattgtcgaatcgatttacgaactttaatcgagttggttcggttcaatgtcagcc 27902442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 220 - 340
Target Start/End: Complemental strand, 33164110 - 33163990
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||| ||||| |||  |  | ||||||||||| | ||||||||    
T  33164110 ctcatttaattaacgaacttaattttcagctcaagtccagctcgttaggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactata 33164011  T
Q  320 ttcgagttggttcggttcatt 340  Q
     |||| |||||||||||||||    
T  33164010 atcgaattggttcggttcatt 33163990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 34116356 - 34116246
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||| |||||||||||||| ||||||||  ||||  |||||| || |||| ||| ||| ||||||||||||| ||||||||||||||| ||||    
T  34116356 atcgagtcatcacatgaaccaaacgagtcgaactacatatagctcaagttcagctcaattatttagcgaacttaattttaagctcaagttcggctcattt 34116257  T
Q  267 ggttcatgaac 277  Q
    |||||||||||    
T  34116256 ggttcatgaac 34116246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 376 - 697
Target Start/End: Original strand, 7241919 - 7242240
Alignment:
Q  376 ttaacctcttctaatagtttacaataacttacttgccattcccaataagctttttctattagaaacaacaaagcttctgcaagagccaaggaataaaagg 475  Q
    |||||||| || ||||||| ||| || |||| || ||| ||||||||||| || ||| |||  |||||||||||||||||||||||||| | |||||||     
T  7241919 ttaacctcatccaatagttcacagtagcttaatttccactcccaataagccttctctgttaagaacaacaaagcttctgcaagagccaatgcataaaaga 7242018  T
Q  476 tatatagagcagatcgacagttcctcttaccggtgtctctgttcgttacctctccaaaatcatgccttactagcttcattgatgagagaaccacactagc 575  Q
    | |  |||||||||   | |||||||||| |||| ||||  || |  | | ||||| ||| |||||| |  |||||  | || || |||||||| | |||    
T  7242019 tgtcgagagcagattcgcggttcctcttatcggtatctcccttggcaatcactccataattatgcctgatgagctttgtcgaagacagaaccacgcaagc 7242118  T
Q  576 tgttgcagaaataagttgaagccaatagagaattctacttacatgccttaaaagaaaaaaccatttagcataaggtaataatggaacttctgagctaacc 675  Q
    ||||||||||| ||| ||||||||||| ||||   | || | ||||| | |||  ||||||||||||||||| ||||| | |||||| ||||| |||| |    
T  7242119 tgttgcagaaagaagctgaagccaatacagaaccttgctgatatgccctgaaatgaaaaaccatttagcatatggtaaaagtggaacgtctgaactaatc 7242218  T
Q  676 cacatccttgttggtgtccttg 697  Q
    ||| |||| || | ||||||||    
T  7242219 cacgtcctagtcgttgtccttg 7242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 177 - 346
Target Start/End: Complemental strand, 24844839 - 24844670
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||  |||||||| ||| || |  | |||| || |||||||| ||| |||| |||||||||||||||||||| ||| ||||||||||||||    
T  24844839 ctcatgaaccaattgaatcgaattatatacaccttaagttcagctcatttatttatcgaatttaattttcagctcaagttcagctcatttggttcatgaa 24844740  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 346  Q
    |||| ||||| |    ||||| ||| |||| ||| |||||||  |||||||||||||| |||||| ||||    
T  24844739 ccaagttcaacgagataattgccgaatcgagtttcgaactattatcgagttggttcggatcattgtcagc 24844670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 177 - 280
Target Start/End: Original strand, 14103234 - 14103337
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||| |||| |||||||| ||| |||| || |||| |  ||||||||||||||||||||||||||||| | ||||||| ||||||||| |||||||    
T  14103234 ctcatgaatcaaatgaatcgaaatatatatagtttaagttctgctcatttaattaacgaacttaattttcagtttaagttcgacttatttggctcatgaa 14103333  T
Q  277 ccaa 280  Q
    ||||    
T  14103334 ccaa 14103337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 39690127 - 39690221
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggct 261  Q
    |||||| ||||||||||||||||||| ||||||||  ||||  |||||| ||||||| ||| || ||||||||||||||||||||||||| ||||    
T  39690127 atcgagtcatctcatgaaccaaacgagtcgaactacatatagctcaagttcaactcaattagttgacgaacttaattttcagctcaagtttggct 39690221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 219 - 340
Target Start/End: Original strand, 17616276 - 17616397
Alignment:
Q  219 actcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactat 318  Q
    |||| |||| |||| |||||||||||| ||||||||||||||| |||||||||||| | ||||||||| |    ||||||||| |||| |||  ||||||    
T  17616276 actcgtttagttaatgaacttaatttttagctcaagttcggctcatttggttcatgtatcaaattcaacgagataattgtcgaatcgagtttctaactat 17616375  T
Q  319 attcgagttggttcggttcatt 340  Q
     |||||||||||||| ||||||    
T  17616376 tttcgagttggttcgattcatt 17616397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 44740666 - 44740486
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||||||  ||| ||||||||| || |  |||||| || |||||||  ||||||||||||||||| ||||||||||| |||  ||    
T  44740666 tatcgagtcaactcatgaaccac-cgagtcgaactatataaagctcaagttcagctcatttgtttaacgaacttaatttttagctcaagttcagctcgtt 44740568  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||||| ||||| |    ||||||||| |||| |    ||||||  ||||||||||||||||||||| |||||    
T  44740567 tggttcatgaaccaagttcaacgagttaattgtcgaatcgagtcccaaactattgtcgagttggttcggttcattgccagcc 44740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 1094457 - 1094535
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatg 288  Q
    |||||| | ||||||||| | ||||| ||||||||||| |||||||||| || ||||||||||||||||||||||||||    
T  1094457 tcaagttcgactcatttattcaacgagcttaattttcaactcaagttcgactcatttggttcatgaaccaaattcaatg 1094535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 41332188 - 41332362
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    ||||||| | ||| |||||||| ||| ||||||||| || || ||| || |  | |||||| ||||| ||||||||||||||||||| |||  || | ||    
T  41332188 atcgagcaagctcgtgaaccaaccgagtcgaactatgtacaactcatgttcggcccatttatttaacaaacttaattttcagctcaaattcaactcaatt 41332287  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||| ||||||||| |||||      ||||||||| |||| ||| |||||||||||||||||||| |||||||||    
T  41332288 ggtttatgaaccaagttcaacaagttaattgtcgaatcgagtttcgaactatattcgagttggtttggttcattg 41332362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 350
Target Start/End: Original strand, 10412407 - 10412580
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||||||| || ||| | ||| ||||  |||||| ||||||||||| ||||||| ||||||||| | |||||||||| || || | ||| | |||    
T  10412407 ctcatgaaccaaatgagtcggattatatatagctcaagtccaactcatttatttaacgagcttaatttttaactcaagttcgactcatctagtttacgaa 10412506  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcctac 350  Q
    || |||| || | || ||||  ||| |||||| | ||||||| |||||||||||| ||||||||  ||||||||    
T  10412507 ccgaatttaacgaactaattaccgaatcgaatctcgaactattttcgagttggtttggttcattatcagcctac 10412580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 217 - 346
Target Start/End: Complemental strand, 17369122 - 17368994
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaact 316  Q
    ||||||||||| ||||| || |||||||||| |||||||||| || ||| ||||||| ||| |||||||| |    ||||||||||| || ||  |||||    
T  17369122 caactcatttacttaacaaatttaattttcaactcaagttcgactcatt-ggttcataaactaaattcaacgagttaattgtcgagttgagttccgaact 17369024  T
Q  317 atattcgagttggttcggttcattggcagc 346  Q
    ||||||||||||| ||||||||||| ||||    
T  17369023 atattcgagttggctcggttcattgtcagc 17368994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 18667721 - 18667882
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||||| ||||||||| ||||| |||||| ||||| ||||| |||||||| ||||  || ||||||| ||  |||  ||||||||||||||||    
T  18667721 atgaaccaaacgagtcgaactatatataactcaagttcaacttatttatttaacgaaattaagctttagctcaaattatgctcgtttggttcatgaacca 18667820  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | ||||||  |  ||||  |||||||| ||  ||||| |||| ||||||  |||||||||||    
T  18667821 agttcaataaaataattaccgagtcgagttccgaactttatttgagttgtatcggttcattg 18667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 20203825 - 20203723
Alignment:
Q  239 taattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttca 338  Q
    |||||||||||||| ||| | || |||||||||||||||||| ||||| | | ||||||| || |||||||  ||||| || |||||||||||||||| |    
T  20203825 taattttcagctcaggtttgactcatttggttcatgaaccaagttcaacgaatcaattgttgaatcgaattacgaactttaatcgagttggttcggttaa 20203726  T
Q  339 ttg 341  Q
    |||    
T  20203725 ttg 20203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 2578087 - 2578155
Alignment:
Q  218 aactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    |||||||||| |||||||| |||||||||||||||||||| ||| ||||| |||||||| ||| |||||    
T  2578087 aactcatttatttaacgaatttaattttcagctcaagttcagctcatttgattcatgaatcaagttcaa 2578155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 207 - 286
Target Start/End: Original strand, 13829875 - 13829954
Alignment:
Q  207 aattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    ||||||||| |||||||||||||||||||  |||||||| | |||||||||  || |||||||| ||||||||| |||||    
T  13829875 aattcaagttcaactcatttaattaacgagtttaatttttaactcaagttcaactcatttggtttatgaaccaagttcaa 13829954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 252
Target Start/End: Original strand, 40680177 - 40680263
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctca 252  Q
    ||||||| || || ||||||||| ||| ||||||||| ||||| |||| | || |||||||| ||||||||| ||||||||||||||    
T  40680177 tatcgagtcagcttatgaaccaatcgagtcgaactatatataactcaaattcagctcatttatttaacgaacataattttcagctca 40680263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 278
Target Start/End: Original strand, 9963726 - 9963827
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    |||||||||||| ||| ||  ||||| || || |||||| || ||||||||  |||||||||||||||| | || |||||| ||| ||||||||||||||    
T  9963726 ctcatgaaccaatcgagtcagactatatacaactcaagttcagctcatttatctaacgaacttaatttttaacttaagttcagctcatttggttcatgaa 9963825  T
Q  277 cc 278  Q
    ||    
T  9963826 cc 9963827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 254 - 347
Target Start/End: Original strand, 29806950 - 29807043
Alignment:
Q  254 gttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||| ||||||||| | |||||| ||||| | | ||||| |||| |||| | ||||||||| ||||| |||||||||||||||| |||||    
T  29806950 gttcggctcatttggttcgtaaaccaagttcaacgaatcaattatcgaatcgagtcttgaactattttcgaattggttcggttcattgccagcc 29807043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 236
Target Start/End: Original strand, 33831384 - 33831453
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaa 236  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||    
T  33831384 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaa 33831453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 20987565 - 20987629
Alignment:
Q  101 aagtgaaattcctacttcctagatggtggaacggatggataaaaagaaaaggagaaatgtaacga 165  Q
    |||||||||||||||||||||||| |||||| |||||| |||||  ||||||||| | |||||||    
T  20987565 aagtgaaattcctacttcctagatagtggaatggatgggtaaaagtaaaaggagatacgtaacga 20987629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 35796284 - 35796356
Alignment:
Q  269 ttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||| ||||||| | ||| ||| |||||||||||  |||||||||||||||| |||| |||||||    
T  35796284 ttcatgaaccaagttcaatgaatcaactgttgagtcgaatttcaaactatattcgagttgattcgattcattg 35796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 210 - 341
Target Start/End: Original strand, 9753107 - 9753237
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| ||||||||||| ||  || |||||||||| || ||| ||||  || ||||||||||||||||||| | || | | |||||||||| ||||||     
T  9753107 tcaagttcaactcatttagttgccggacttaatttt-agttcacgttcttctcatttggttcatgaaccaaacttaacgaatcaattgtcgaatcgaatc 9753205  T
Q  310 ttgaactatattcgagttggttcggttcattg 341  Q
    | ||||| | ||||| |||| |||||||||||    
T  9753206 tcgaactttgttcgacttggctcggttcattg 9753237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 20987771 - 20987845
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaa 241  Q
    |||||| ||||||||||| | |||||||||||| || |||| ||||| | || |||||||||| |||||||||||    
T  20987771 atcgagtcatctcatgaatctaacgaatcgaaccatttatagttcaacttcagctcatttaatcaacgaacttaa 20987845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 219 - 341
Target Start/End: Complemental strand, 45383269 - 45383147
Alignment:
Q  219 actcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactat 318  Q
    |||||||||||||| ||| |||||||| ||||||| ||  ||  |||||||||||||| ||| ||||  |   ||||||| || ||||| || ||||||     
T  45383269 actcatttaattaatgaaattaattttaagctcaaatttagcgcatttggttcatgaatcaagttcatcgagtcaattgttgaatcgaacttcgaactaa 45383170  T
Q  319 attcgagttggttcggttcattg 341  Q
    |||| |||| |||||||||||||    
T  45383169 attcaagttagttcggttcattg 45383147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 44935737 - 44935805
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcag 248  Q
    ||||||||||||| || |||||| ||||||| |||| || |||||||| ||||||||| | ||||||||    
T  44935737 atgaaccaaacgagtcaaactatatataatttaagttcagctcatttagttaacgaacatgattttcag 44935805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 2328463 - 2328385
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagtt 256  Q
    ||||||| || |||| ||||||||| |||||||||||| ||||||||||| || | |   |||||||||| ||||||||    
T  2328463 tcatgaatcacacgagtcgaactatatataattcaagttcaactcatttatttgaagggtttaattttcaactcaagtt 2328385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 283
Target Start/End: Complemental strand, 10196936 - 10196870
Alignment:
Q  217 caactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaatt 283  Q
    ||||||||||| | ||| | || ||||||||||||||  || ||||||||| |||||||||||||||    
T  10196936 caactcatttattgaacaagctcaattttcagctcaaaatcagcttatttgattcatgaaccaaatt 10196870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 453440 - 453620
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| ||||||||||||||||||||||||||||||| ||||||| | |||  ||     
T  453440 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcaactcaagtccagctcgtta 453539  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  453540 ggttcatgaaccaagttcaacggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 453620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 11161529 - 11161703
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  11161529 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 11161628  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||||| |||  || | ||||||||||| | |||||||| || |||||||| |||||||||    
T  11161629 ggttcatgaaccaagttcaacggattaaatatcgagtcgaatgtcgaactataatcaagttggtttggttcattg 11161703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 34516095 - 34516269
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| || |||| |||||  |||||||||||||||||||||||||||||| ||||    
T  34516095 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattaatcgacgaacttaattttcagctcaagttcggctcattt 34516194  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||| ||||| ||| ||||||| | |||||||||| | |||||  ||||| || | |||||||||||||||||||    
T  34516195 ggttgatgaatcaagttcaatgaatcaattgtcgaattgaattacgaactttaattgagttggttcggttcattg 34516269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 43967481 - 43967647
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||| ||||| |||||| ||||||||||| |||||||||||||| || |||||||||||||||  |||||||||||||||||    
T  43967481 tgaaccaaacgagtcgaactatatataactcaagttcaactcatttagttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaaccaa 43967580  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||| | || ||||   ||||||| ||  ||||| | ||| |||||  ||||||||||| |||||    
T  43967581 attcaacgaactaattactgagtcgagttccgaactttgttcaagttgtatcggttcattgccagcc 43967647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 167 - 340
Target Start/End: Complemental strand, 27189265 - 27189092
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||| | ||||||||| |||||||| ||  ||||| |||||| ||||||| ||| || ||||||||||||||||||||||||||| || ||||    
T  27189265 atcgagtcatcccgtgaaccaaatgaatcgaattacatataactcaagttcaactcaattagttgacgaacttaattttcagctcaagttcgactcattt 27189166  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    |||||||||||||| ||| | | | ||||| |||| || ||||  ||||| || |||||||| |||||||||||    
T  27189165 ggttcatgaaccaagttcgacgaatcaattatcgaatctaattacgaactctaatcgagttgattcggttcatt 27189092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 177 - 347
Target Start/End: Original strand, 3307901 - 3308071
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||| |||||| ||| ||||||||| || |  |||||| |  |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3307901 ctcataaaccaatcgagtcgaactatatacagctcaagttcggctcatttatttaacgaacttaattttctgctcaagttcggctcatttggttcatgaa 3308000  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | || ||| | |    ||||||||| |||| ||  |||||||  ||||||||||||||||||||| |||||    
T  3308001 ctaagttctacgagttaattgtcgaatcgagttccgaactattgtcgagttggttcggttcattgccagcc 3308071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 347
Target Start/End: Complemental strand, 33280146 - 33279980
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| || |||||  |||| ||||||| || |||| ||| || |||||||||||||| ||||||  ||||||| ||||||||||||||||||    
T  33280146 tgaaccaaacgagtctaactacatatagttcaagttcagctcaattagttgacgaacttaattttaagctcatattcggctcatttggttcatgaaccaa 33280047  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||| | | | ||||| |||| || ||||  ||||| || ||||||||||||||||||||| |||||    
T  33280046 gttcgacgaatcaattatcgaatcaaattacgaactttaatcgagttggttcggttcattgtcagcc 33279980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 34655006 - 34655172
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||| ||||| ||||||  |||||||||| ||||| |||||||| || |||||||||||| ||  |||||||||||||| ||    
T  34655006 tgaaccaaacgagtcgaactatatataactcaagtttaactcatttagttaacaaacttaatctttagctcaagttcgactcgtttggttcatgaactaa 34655105  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     |||||   || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  34655106 gttcaacaaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcc 34655172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 23181132 - 23181251
Alignment:
Q  187 aaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaa 286  Q
    |||||| ||||||||  | || ||||||| || |||| ||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||||| |    
T  23181132 aaacgagtcgaactacatctagttcaagttcagctcaattagtttacgaacttaattttcagttcaagttcggctcatttggttcatgaaccaaattcga 23181231  T
Q  287 tggaccaattgtcgagtcga 306  Q
     | | |||||||||| ||||    
T  23181232 cgaatcaattgtcgaatcga 23181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 177 - 347
Target Start/End: Complemental strand, 9412697 - 9412527
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaa 276  Q
    ||||||||  |||||| ||||| ||| ||||| |||| | || ||||||||  ||||||| |||||| ||| ||||||||| ||| ||||||||||||||    
T  9412697 ctcatgaattaaacgagtcgaattatatataactcaaattcagctcatttatgtaacgaatttaattctcaactcaagttcagctcatttggttcatgaa 9412598  T
Q  277 ccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||| ||||| |     |||||||||||||  |   ||||||| ||||||||||||||||||||| |||||    
T  9412597 ccaagttcaacgagttcattgtcgagtcgagctccaaactataatcgagttggttcggttcattgccagcc 9412527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 39478090 - 39478187
Alignment:
Q  250 tcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||  || |||||||||||||||||| | ||||| ||||||| |||| |||| | | ||||||| |||||||||||||||||||||| |||||    
T  39478090 tcaagttcaactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagtatcgaactattttcgagttggttcggttcattgccagcc 39478187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 178 - 346
Target Start/End: Original strand, 22563974 - 22564142
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| ||||| ||| | || ||||||| |   ||||| | || |||| ||||||||||| ||||||||||  |||||||||||||||||    
T  22563974 tcatgaaccaaacgagtcgaattatatgtagttcaagttcggttcattcatttgacgagcttaattttcaactcaagttcgatttatttggttcatgaac 22564073  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagc 346  Q
    ||| ||||| | | |||||  ||| || |||||  || ||| |||||||||| ||||||| ||| ||||    
T  22564074 caagttcaacgaaacaattaccgaatcaaatttcaaattattttcgagttggatcggttcgttgccagc 22564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 247 - 341
Target Start/End: Original strand, 43384831 - 43384925
Alignment:
Q  247 agctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||  || |||||||||||||||||| ||||| | |  |||| |||| |||||| | ||||||| ||||||||||||||||||||||    
T  43384831 agctcaagttcaactcatttggttcatgaaccaacttcaacgaattaattatcgaatcgaatctcgaactattttcgagttggttcggttcattg 43384925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 221 - 328
Target Start/End: Original strand, 9135963 - 9136070
Alignment:
Q  221 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatat 320  Q
    ||||||| ||||| ||||||| ||||||||||||||| ||||||||| ||||| |||||| ||||| |    |||||||||||||| || | |||||| |    
T  9135963 tcatttagttaacaaacttaaatttcagctcaagttcagcttatttgattcataaaccaagttcaacgagttaattgtcgagtcgagttctaaactattt 9136062  T
Q  321 tcgagttg 328  Q
    | ||||||    
T  9136063 ttgagttg 9136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 234 - 340
Target Start/End: Original strand, 32740663 - 32740769
Alignment:
Q  234 gaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcg 333  Q
    ||||||| ||||||| |||||||| | | ||||||||||||||||||||||||||    ||||||||| | || ||   ||||||  |||||||||||||    
T  32740663 gaacttatttttcagttcaagttcagttcatttggttcatgaaccaaattcaatgagttaattgtcgaattgagttccaaactattgtcgagttggttcg 32740762  T
Q  334 gttcatt 340  Q
    |||||||    
T  32740763 gttcatt 32740769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 10749383 - 10749311
Alignment:
Q  186 caaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 258  Q
    ||||||| ||||||||  ||||  |||||| || |||| ||| || |||||||||||||||||||||||||||    
T  10749383 caaacgagtcgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcagctcaagttcg 10749311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 35058318 - 35058380
Alignment:
Q  221 tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaatt 283  Q
    ||||||| ||||| ||||| ||||||||||||||||| ||| ||||| ||  |||||||||||    
T  35058318 tcatttagttaacaaacttgattttcagctcaagttcagctcatttgattgttgaaccaaatt 35058380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 19253 - 19433
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||| ||| | ||  |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  19253 atcgagccatctcatgaacctaacgagtcgaattatatgtagctcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 19352  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | ||||||||||| | |||||||| ||||||||||||||||||||| |||||    
T  19353 ggttcatgaaccaagttcaaaggattagatatcgagtcgaatgtcgaactataatcgagttggttcggttcattgccagcc 19433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 4e-37; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 166 - 341
Target Start/End: Complemental strand, 4441485 - 4441310
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||| ||| |||||||||||| ||||||||||||| || | ||||||| || |||||||| ||||||||||||||||||| ||||||||| ||| |||    
T  4441485 tatcgaaccagctcatgaaccaaccgaatcgaactatatacagttcaagttcagctcatttatttaacgaacttaattttcaactcaagttcagctcatt 4441386  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | |||| |||||||| ||||| |  | ||||||||| |||| ||| |||||||  |||||||||||||||||||||    
T  4441385 tagttcgtgaaccaagttcaacgagctaattgtcgaatcgagtttcgaactattgtcgagttggttcggttcattg 4441310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 168 - 347
Target Start/End: Complemental strand, 5640434 - 5640255
Alignment:
Q  168 tcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttg 267  Q
    ||||| |||||  |||||||||||| ||||||||| |||| ||||||| || |||| ||| || ||||||||||||||||| |||||||||||| |||||    
T  5640434 tcgagtcatcttgtgaaccaaacgagtcgaactatatatagttcaagttcagctcaattagttgacgaacttaattttcagttcaagttcggctcatttg 5640335  T
Q  268 gttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||||||||||| ||| | | | ||||| |||| |||||||  ||||| || ||||||||||||||||||||| |||||    
T  5640334 gttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaactctaatcgagttggttcggttcattgccagcc 5640255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 178 - 347
Target Start/End: Complemental strand, 3081890 - 3081721
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||||||||||| ||||||||||| |||||||||| || ||||||||| |||||    
T  3081890 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttaattaacgagcttaattttcaactcaagttcgactcatttggttcgtgaac 3081791  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| ||||| | ||||||| |||| |||| | | ||||||| |||||| ||||||||||||||| |||||    
T  3081790 caagttcaacgaaccaattatcgaatcgagtatcgaactattttcgagctggttcggttcattgccagcc 3081721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 10961979 - 10961799
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| ||||||||  |||| ||||||| || |||| ||| || |||||||||||||||||||||| |||| || ||||    
T  10961979 atcgagtcatctcgtgaaccaaacgagtcgaactacatatagttcaagttcagctcaattagttgacgaacttaattttcagctcaaattcgactcattt 10961880  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| | | |||||||||| || ||||   |||| || ||||||||||||||||||||| |||||    
T  10961879 ggttcatgaaccaagttcaacgaatcaattgtcgaatcaaattacaaactttaatcgagttggttcggttcattgccagcc 10961799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 209 - 347
Target Start/End: Original strand, 13312021 - 13312161
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcga-- 306  Q
    ||||||| ||||||||||| ||||||||||||||||||| |||||||||| || |||||||||||||||||| | ||||| ||||||| |||| ||||      
T  13312021 ttcaagttcaactcatttatttaacgaacttaattttcaactcaagttcgactcatttggttcatgaaccaagtccaatgaaccaattatcgaatcgagt 13312120  T
Q  307 attttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || | ||||||| |||||||||||||||||||||| |||||    
T  13312121 atatcgaactattttcgagttggttcggttcattgccagcc 13312161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 181 - 347
Target Start/End: Original strand, 33110429 - 33110595
Alignment:
Q  181 tgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||||||||||| ||||||||| ||||| |||||| | ||||||||| |||||||||||||| || |||| ||||||||||  |||||||||||||||||    
T  33110429 tgaaccaaacgagtcgaactatatataactcaagttcgactcatttagttaacgaacttaatctttagcttaagttcggctcgtttggttcatgaaccaa 33110528  T
Q  281 attcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
     ||||| | || ||||  |||||||| ||  ||||| |||||||||||  ||||||||||| |||||    
T  33110529 gttcaacgaactaattaccgagtcgagttccgaactttattcgagttgtatcggttcattgccagcc 33110595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 347
Target Start/End: Complemental strand, 9950943 - 9950763
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| |||||||||||| | ||||||  ||||  |||||| || |||| ||| || |||||||||||||||| ||||||||||||| ||||    
T  9950943 atcgagtcatctcgtgaaccaaacgagttgaactacatatagctcaagttcagctcaattagttgacgaacttaattttcaactcaagttcggctcattt 9950844  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||| ||| | || ||||||| || |||| |||||| || |||||||| |||| ||||||| |||||    
T  9950843 ggttcatgaaccaagttcgatgaatcatttgtcgaatcaaattatgaactttaatcgagttgattcgattcattgccagcc 9950763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 10346678 - 10346858
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||  ||||| ||||||||| | ||| |||||| || |||||||||||||||||||||||||||||||||||| | |||  ||     
T  10346678 atcgagtcatctcatgaacttaacgagtcgaactatatgtaactcaagttcagctcatttaattaacgaacttaattttcagctcaagtccagctcgtta 10346777  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||||| ||||| |||  |  | | ||||||||| | |||||||| |||| |||||| ||||||||| |||||    
T  10346778 ggttcatgaaccaagttcaacggattagatatagagtcgaatgtcgaactataatcgatttggtttggttcattgccagcc 10346858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 178 - 340
Target Start/End: Original strand, 7437272 - 7437434
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| |||||||||   || ||||||| || |||||||| ||||||| ||||||||||| || ||||||| || ||||||||| |||||    
T  7437272 tcatgaaccaaacgagtcgaactatacttagttcaagttcagctcatttatttaacgagcttaattttcaactaaagttcgactcatttggttcgtgaac 7437371  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcatt 340  Q
    ||| ||||| | ||| ||| |||| |||| | | ||||||| |||||||| ||||||||||||    
T  7437372 caagttcaacgaacccattatcgaatcgagtatcgaactattttcgagttagttcggttcatt 7437434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 347
Target Start/End: Original strand, 8200599 - 8200768
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||||||||||||||||| ||||| ||||||||| | ||  |||||| |||||||||||||||||||||||||||||||||||            ||     
T  8200599 atcgagccatctcatgaacctaacgagtcgaactatatgtagctcaagttcaactcatttaattaacgaacttaattttcagctc-----------gtta 8200687  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||| ||| ||||| |||  || | ||||||||||| | |||||||| ||||||||||| ||||||||| |||||    
T  8200688 ggttcatgaatcaagttcaacggattaaatatcgagtcgaatgtcgaactataatcgagttggtttggttcattgtcagcc 8200768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Original strand, 1501804 - 1501985
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    ||||||| || |||||||||||| ||| ||||||||| || |  | ||||    |||||||| ||||||||||||||||||||||||||||||| | |||    
T  1501804 tatcgagtcagctcatgaaccaaccgagtcgaactatatacagcttaagtttggctcatttatttaacgaacttaattttcagctcaagttcggttcatt 1501903  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    |||||||||||| || ||||| |    ||||||| | |||| ||| |||| ||  ||||||||||||||||||||| |||||    
T  1501904 tggttcatgaacgaagttcaacgagttaattgtcaaatcgagtttcgaacaattgtcgagttggttcggttcattgtcagcc 1501985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 178 - 347
Target Start/End: Original strand, 22295884 - 22296053
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    |||||||||||| || | ||||||| ||||| |||| | |||| |||||| |||||||||||||| || |||||||||||||||  ||||||||||||||    
T  22295884 tcatgaaccaaaagagttgaactatatataactcaaattcaacacatttacttaacgaacttaatctttagctcaagttcggctcgtttggttcatgaac 22295983  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||| || |||  || ||||   ||||||| ||  ||||| ||||| |||||  | |||||||||||||||    
T  22295984 caagtttaataaactaattactgagtcgagttccgaactttattcaagttgtcttggttcattggcagcc 22296053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 6999223 - 6999343
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||||| |||||||||||| ||| ||||||||| || | ||||||| ||  ||||||  ||||| ||||||||||||||||||||||| ||| |||    
T  6999223 tatcgagccaactcatgaaccaaccgagtcgaactatataaagttcaagttcagttcatttgtttaacaaacttaattttcagctcaagttcagctcatt 6999322  T
Q  266 tggttcatgaaccaaattcaa 286  Q
    | |||||| |||||| |||||    
T  6999323 tagttcattaaccaagttcaa 6999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 18095487 - 18095595
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    |||||||| ||| |||| |||||||  |||  |||||| || |||||||| ||||||||||||||||| | |||||||||| |||||||||||| |||||    
T  18095487 tcatgaacaaaatgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaatttttaactcaagttcgacttatttggttcgtgaac 18095586  T
Q  278 caaattcaa 286  Q
    ||| |||||    
T  18095587 caagttcaa 18095595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 18099784 - 18099947
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||||| |||||||  |||  |||||| || |||||||| ||||||||||||||| | | ||||| |||| || ||||||||| |||||    
T  18099784 tcatgaaccaaacgaattgaactatgcatagctcaagttcatctcatttatttaacgaacttaattgttaactcaaattcgactcatttggttcgtgaac 18099883  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| ||||| | | | ||| |||| |||| | |  |||| | |||||||||||| |||||||||    
T  18099884 caagttcaacgaatccattatcgaatcgagtctcaaacttttttcgagttggtttggttcattg 18099947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 167 - 301
Target Start/End: Complemental strand, 27985073 - 27984939
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| |||||| ||||| |||||| ||||||||  | || ||||||| || |||| ||| || || |||||||||||||| |||||||||||| ||||    
T  27985073 atcgagtcatctcgtgaactaaacgagtcgaactacatctagttcaagttcagctcaattagtttacaaacttaattttcagttcaagttcggctcattt 27984974  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcga 301  Q
    ||||||| |||||| ||| | | | ||||||||||    
T  27984973 ggttcataaaccaagttcgacgaatcaattgtcga 27984939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 341
Target Start/End: Original strand, 17441123 - 17441289
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaac-tcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatg 274  Q
    |||| ||||||||| || |||||||||| |||| |||||| |  | ||||||| || |||| ||||||||||| |||||||||  || ||||||||||||    
T  17441123 tctcgtgaaccaaatgagtcgaactatccataactcaagttcggcctcatttatttgacgagcttaattttcaactcaagttcaactcatttggttcatg 17441222  T
Q  275 aaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| || ||||| | |  ||||  | | |||| ||| ||||||| |||| |||||||||||||||||    
T  17441223 aactaagttcaacgaattaattaccaaatcgagtttcgaactattttcgggttggttcggttcattg 17441289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 3901548 - 3901607
Alignment:
Q  177 ctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaa 236  Q
    ||||||||||||||||| |||||||| ||||| | |||| || |||||||||||||||||    
T  3901548 ctcatgaaccaaacgaaccgaactatatataacttaagttcagctcatttaattaacgaa 3901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 12428960 - 12429007
Alignment:
Q  294 attgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||||    
T  12428960 attgtcgagtcgagttctgaactatatttgagttggttcggttcattg 12429007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 32163551 - 32163610
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    |||||||| ||||||||||||||||||| ||||||||  ||| ||| |||||||||||||    
T  32163551 ctcatttagttaacgaacttaattttcaactcaagtttagctcattaggttcatgaacca 32163610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 13355755 - 13355722
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaa 253  Q
    ||||||||||||||||||||||||||||||||||    
T  13355755 ctcatttaattaacgaacttaattttcagctcaa 13355722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Original strand, 9948 - 10120
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| || || ||||||||||||| ||||| |||  ||| | ||| | || |||||||||||||||||||||||||||| || |||||||||| ||||    
T  9948 atcgagtcaactgatgaaccaaacgagtcgaattat--atagtacaaattcagctcatttaattaacgaacttaattttcatcttaagttcggctcattt 10045  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    ||| |||||| ||||||||| | |  |||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  10046 ggtacatgaatcaaattcaacgaattaattgtcgagtcaaattttaaactatattcgagttgattcggttcattg 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 11439 - 11600
Alignment:
Q  180 atgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaacca 279  Q
    ||||||||||||| ||||| ||| |||| ||||| | || |||||||||||||||||||||||||||| || |||||||||| |||||||  ||||| ||    
T  11439 atgaaccaaacgagtcgaattatatatagttcaaattcagctcatttaattaacgaacttaattttcatctgaagttcggctcatttggtatatgaatca 11538  T
Q  280 aattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    | ||||| | |  |||| ||||||| |||||| |||||| ||||||||||||||||||||||    
T  11539 agttcaacgaattaattatcgagtcaaattttaaactatgttcgagttggttcggttcattg 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 167 - 341
Target Start/End: Complemental strand, 7491 - 7317
Alignment:
Q  167 atcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttattt 266  Q
    |||||| ||||||||||||||||||| |||| |||| |||  ||||||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||    
T  7491 atcgagtcatctcatgaaccaaacgagtcgacctatatatggttcaagttcagctcaattagttagcgaacttaattttcagctcaagttcggctcattt 7392  T
Q  267 ggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
    |||||||||||||| ||| | | | ||||| |||| |||||||  ||||  || |||| ||||||||||||||||    
T  7391 ggttcatgaaccaagttcgacgaatcaattatcgaatcgaattacgaacactaatcgaattggttcggttcattg 7317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 176 - 347
Target Start/End: Original strand, 14392 - 14563
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    |||| |||||||||||| |||||||||| |||| | |||| |  |||||||| || |||| ||||||||||  |||||||||   | |||||||||||||    
T  14392 tctcgtgaaccaaacgagtcgaactatccataactaaagttcggctcatttatttgacgagcttaattttcgactcaagttcaaatcatttggttcatga 14491  T
Q  276 accaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    ||||| ||||||| | |||||  ||| |||| ||| ||||||| |||| ||||||||||||||||| |||||    
T  14492 accaagttcaatgaatcaattaccgaatcgagtttcgaactattttcgggttggttcggttcattgtcagcc 14563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 352 - 254
Alignment:
Q  182 gaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaa 280  Q
    |||| |||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||||| | | ||||||||||||| ||| ||||||||||||||    
T  352 gaacaaaacgagtcgaactgtctataactcaagttcaactcatttaattaacgaacttaattcttaactcaagttcggctaattaggttcatgaaccaa 254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 166 - 347
Target Start/End: Complemental strand, 26805 - 26624
Alignment:
Q  166 tatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatt 265  Q
    |||||||  ||||| |||||||||||| ||||||||  ||||  | |||| || |||| ||| || ||||||||||||||||||||||||||| || |||    
T  26805 tatcgagttatctcgtgaaccaaacgagtcgaactacatatagcttaagttcagctcaattagttgacgaacttaattttcagctcaagttcgactcatt 26706  T
Q  266 tggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattggcagcc 347  Q
    || |||||||||||| |||||   | || ||||||| |||||||  ||||| || | ||||||||||| ||||||| |||||    
T  26705 tgattcatgaaccaagttcaacaaatcagttgtcgaatcgaattacgaactctaattgagttggttcgattcattgtcagcc 26624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 210 - 347
Target Start/End: Original strand, 21088 - 21224
Alignment:
Q  210 tcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaatt 309  Q
    |||||| ||||||||||| |||| || ||||||||||| |||||||||| ||  ||||||||||||||||| ||||| | | ||||| |||| |||| |     
T  21088 tcaagttcaactcatttatttaatgagcttaattttcaactcaagttcgactc-tttggttcatgaaccaagttcaacgaatcaattatcgaatcgagtc 21186  T
Q  310 ttgaactatattcgagttggttcggttcattggcagcc 347  Q
    | ||||||| |||||||||||||||||||||| |||||    
T  21187 tcgaactattttcgagttggttcggttcattgtcagcc 21224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 341
Target Start/End: Complemental strand, 32924 - 32794
Alignment:
Q  209 ttcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaat 308  Q
    ||||||| ||| ||||||| ||||||| |||||||| || |||||||||| || |||||||   |||||||| ||||| | |||||||||||| |||| |    
T  32924 ttcaagttcaattcatttatttaacgagcttaatttacaactcaagttcgactcatttggtg--tgaaccaagttcaacgaaccaattgtcgaatcgagt 32827  T
Q  309 tttgaactatattcgagttggttcggttcattg 341  Q
     | ||||||| ||||||||||||||||||||||    
T  32826 atcgaactattttcgagttggttcggttcattg 32794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 189 - 258
Target Start/End: Complemental strand, 25726 - 25657
Alignment:
Q  189 acgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcg 258  Q
    |||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||| | |||||||    
T  25726 acgaatcgaactatatataattcaagttcatctcatttaattaacggacttaattttcagtttaagttcg 25657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 286
Target Start/End: Complemental strand, 952 - 831
Alignment:
Q  165 atatcgagccatctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttat 264  Q
    ||||||||| |  |||||||||| |||| ||||| |||   ||  |||||| ||||||||||| ||||||| ||||||||||| | ||| |||  || ||    
T  952 atatcgagctagttcatgaaccagacgagtcgaattatacttagctcaagttcaactcatttatttaacgagcttaattttcaacccaaattcaactcat 853  T
Q  265 ttggttcatgaaccaaattcaa 286  Q
    |||||||||||||||| |||||    
T  852 ttggttcatgaaccaagttcaa 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 178 - 341
Target Start/End: Original strand, 96248 - 96411
Alignment:
Q  178 tcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaac 277  Q
    ||||||||||||||| ||||| ||   |||| |||||| ||||||||||| ||||||| ||||||||| | || ||||| | || |||||||||| |||     
T  96248 tcatgaaccaaacgagtcgaattacacataactcaagttcaactcatttatttaacgagcttaattttgaacttaagttggactcatttggttcacgaat 96347  T
Q  278 caaattcaatggaccaattgtcgagtcgaattttgaactatattcgagttggttcggttcattg 341  Q
     || ||||||| |  | ||  |||  ||||| | ||||||| |||||| | |||||||||||||    
T  96348 taagttcaatgaattatttaacgaaccgaatctcgaactattttcgagctagttcggttcattg 96411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 286
Target Start/End: Complemental strand, 51476 - 51366
Alignment:
Q  176 tctcatgaaccaaacgaatcgaactatctataattcaagtacaactcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatga 275  Q
    ||||| |||||||| || ||||||||   ||||||||||| ||||||||||| ||||| | ||||||||| |  ||| ||||| || |||||||||| ||    
T  51476 tctcaagaaccaaatgagtcgaactacacataattcaagttcaactcatttatttaacaagcttaattttaaaatcacgttcgactcatttggttcacga 51377  T
Q  276 accaaattcaa 286  Q
    || || |||||    
T  51376 actaagttcaa 51366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 11400 - 11521
Alignment:
Q  220 ctcatttaattaacgaacttaattttcagctcaagttcggcttatttggttcatgaaccaaattcaatggaccaattgtcgagtcgaattttgaactata 319  Q
    |||||||| ||||||||||||||||| | || ||||||  || ||||||||||||||| || ||| | |    ||||||||| |||| ||   ||||||     
T  11400 ctcatttatttaacgaacttaatttttaacttaagttcacctcatttggttcatgaactaagttcgacgaggtaattgtcgaatcgagttccaaactatt 11499  T
Q  320 ttcgagttggttcggttcattg 341  Q
     |||||||||||||||||||||    
T  11500 atcgagttggttcggttcattg 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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