View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6314_low_70 (Length: 263)
Name: NF6314_low_70
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6314_low_70 |
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Alignment Details
Target: chr8 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 37258116 - 37258214
Alignment:
| Q |
15 |
tatccttaaagtcaatcaattgaacttgacaatttagatgagtacaaagtggcaaatatgcacaatcatcattatccactatccaacgtcaacttcatc |
113 |
Q |
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| T |
37258116 |
tatccttaaagtcaatcaattgaacttgacaatttagatgagtacaaagtggcaaatatgcacaatcatcattatccactatccaacgtcaacttcatc |
37258214 |
T |
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Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 37258264 - 37258340
Alignment:
| Q |
169 |
gtaattaagaattctccagcaccaacatttctcatgaatcggtgtcttgtctgtatcattgctgatatgttagaacc |
245 |
Q |
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| T |
37258264 |
gtaattaagaattctccagcaccaacatttctcatgaatcggtgtcttgtctgtatcattgctgatatgttagaacc |
37258340 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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