View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6314_low_79 (Length: 251)

Name: NF6314_low_79
Description: NF6314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6314_low_79
NF6314_low_79
[»] chr8 (23 HSPs)
chr8 (103-241)||(18759302-18759443)
chr8 (166-235)||(23946630-23946699)
chr8 (1-57)||(28501161-28501217)
chr8 (1-57)||(18759200-18759256)
chr8 (1-57)||(27893616-27893672)
chr8 (1-57)||(27905855-27905911)
chr8 (1-57)||(27952274-27952330)
chr8 (166-225)||(22242513-22242572)
chr8 (166-235)||(22333630-22333700)
chr8 (166-235)||(8497-8566)
chr8 (166-235)||(23417698-23417766)
chr8 (169-216)||(22585383-22585430)
chr8 (166-235)||(17216938-17217007)
chr8 (166-222)||(20453366-20453423)
chr8 (166-235)||(6103568-6103634)
chr8 (166-235)||(19664134-19664204)
chr8 (166-235)||(20180420-20180489)
chr8 (166-229)||(39696480-39696544)
chr8 (166-235)||(21398285-21398354)
chr8 (166-235)||(21792778-21792847)
chr8 (166-235)||(25850128-25850197)
chr8 (29-57)||(15286985-15287013)
chr8 (29-57)||(15467354-15467382)
[»] scaffold0134 (1 HSPs)
scaffold0134 (166-235)||(11261-11330)
[»] scaffold0083 (2 HSPs)
scaffold0083 (166-235)||(7350-7419)
scaffold0083 (166-229)||(25370-25433)
[»] scaffold0328 (1 HSPs)
scaffold0328 (166-235)||(17367-17436)
[»] scaffold0010 (1 HSPs)
scaffold0010 (166-235)||(128050-128119)
[»] scaffold0003 (1 HSPs)
scaffold0003 (166-235)||(94621-94690)
[»] chr2 (12 HSPs)
chr2 (166-235)||(5984482-5984551)
chr2 (1-57)||(40066255-40066311)
chr2 (166-235)||(22670894-22670964)
chr2 (166-235)||(19357145-19357214)
chr2 (166-235)||(10898681-10898751)
chr2 (167-235)||(18390125-18390194)
chr2 (166-235)||(2524536-2524605)
chr2 (166-235)||(5033277-5033346)
chr2 (166-215)||(24514283-24514332)
chr2 (168-229)||(24782830-24782891)
chr2 (166-215)||(28654518-28654567)
chr2 (168-215)||(22253553-22253600)
[»] scaffold0075 (1 HSPs)
scaffold0075 (167-235)||(59660-59728)
[»] chr7 (20 HSPs)
chr7 (1-57)||(4808343-4808399)
chr7 (1-57)||(17728176-17728232)
chr7 (167-235)||(32996974-32997042)
chr7 (1-57)||(12766960-12767016)
chr7 (1-57)||(13821830-13821886)
chr7 (169-235)||(14552969-14553035)
chr7 (170-235)||(17131372-17131436)
chr7 (166-233)||(13700578-13700645)
chr7 (166-235)||(13151492-13151561)
chr7 (166-235)||(36687120-36687189)
chr7 (166-235)||(44373030-44373099)
chr7 (166-235)||(44381886-44381955)
chr7 (170-235)||(4070091-4070156)
chr7 (166-235)||(14220866-14220934)
chr7 (170-225)||(11003379-11003433)
chr7 (166-207)||(10660904-10660946)
chr7 (166-235)||(12370385-12370454)
chr7 (166-215)||(20584340-20584389)
chr7 (166-235)||(32435381-32435450)
chr7 (167-235)||(11065515-11065583)
[»] chr5 (8 HSPs)
chr5 (1-57)||(23607244-23607300)
chr5 (1-57)||(23838640-23838696)
chr5 (166-235)||(25251524-25251593)
chr5 (166-235)||(25315309-25315378)
chr5 (170-235)||(16226164-16226228)
chr5 (170-235)||(20564589-20564654)
chr5 (170-198)||(20470789-20470817)
chr5 (168-235)||(26760511-26760578)
[»] chr4 (12 HSPs)
chr4 (167-235)||(19961-20029)
chr4 (1-57)||(54955682-54955738)
chr4 (1-57)||(22328070-22328126)
chr4 (166-235)||(32467874-32467944)
chr4 (166-222)||(15607643-15607698)
chr4 (166-229)||(21060880-21060943)
chr4 (166-215)||(9872149-9872199)
chr4 (166-235)||(10358291-10358360)
chr4 (166-235)||(14547639-14547708)
chr4 (166-229)||(16996555-16996618)
chr4 (166-215)||(25089680-25089729)
chr4 (166-213)||(4859719-4859766)
[»] chr1 (11 HSPs)
chr1 (1-57)||(26082978-26083034)
chr1 (166-241)||(19674736-19674813)
chr1 (1-53)||(24637910-24637962)
chr1 (168-235)||(42696072-42696139)
chr1 (166-235)||(24725676-24725744)
chr1 (170-235)||(45753822-45753887)
chr1 (166-215)||(38889032-38889082)
chr1 (170-235)||(51475187-51475251)
chr1 (166-215)||(8277978-8278027)
chr1 (170-235)||(22348725-22348790)
chr1 (166-214)||(48299956-48300004)
[»] scaffold0002 (1 HSPs)
scaffold0002 (166-235)||(396845-396913)
[»] scaffold0589 (1 HSPs)
scaffold0589 (167-235)||(2692-2760)
[»] chr6 (7 HSPs)
chr6 (1-57)||(7409175-7409231)
chr6 (166-235)||(17757650-17757719)
chr6 (170-215)||(31736521-31736566)
chr6 (166-235)||(20412665-20412734)
chr6 (170-235)||(23498832-23498896)
chr6 (166-215)||(1642003-1642052)
chr6 (166-215)||(27127398-27127447)
[»] chr3 (16 HSPs)
chr3 (167-231)||(15025202-15025266)
chr3 (166-216)||(20416473-20416523)
chr3 (166-235)||(35066462-35066531)
chr3 (1-57)||(23008756-23008812)
chr3 (166-235)||(16727525-16727595)
chr3 (166-235)||(22308538-22308607)
chr3 (166-213)||(8493122-8493169)
chr3 (166-215)||(5213868-5213917)
chr3 (166-215)||(41174464-41174513)
chr3 (166-234)||(14440134-14440202)
chr3 (170-206)||(19574041-19574078)
chr3 (172-205)||(24545167-24545200)
chr3 (172-205)||(24554170-24554203)
chr3 (172-205)||(24557232-24557265)
chr3 (167-215)||(44268534-44268582)
chr3 (170-235)||(52312217-52312281)
[»] scaffold0462 (1 HSPs)
scaffold0462 (166-216)||(5005-5055)
[»] scaffold0241 (1 HSPs)
scaffold0241 (166-235)||(572-640)
[»] scaffold0220 (1 HSPs)
scaffold0220 (166-235)||(16787-16856)
[»] scaffold0016 (1 HSPs)
scaffold0016 (166-241)||(171408-171483)
[»] scaffold0594 (1 HSPs)
scaffold0594 (1-57)||(8329-8385)
[»] scaffold0004 (2 HSPs)
scaffold0004 (166-241)||(330400-330475)
scaffold0004 (170-235)||(108570-108635)
[»] scaffold0671 (1 HSPs)
scaffold0671 (166-235)||(4222-4287)
[»] scaffold0375 (1 HSPs)
scaffold0375 (166-235)||(10275-10344)
[»] scaffold0051 (1 HSPs)
scaffold0051 (168-235)||(69460-69527)
[»] scaffold0042 (2 HSPs)
scaffold0042 (166-229)||(27630-27694)
scaffold0042 (173-235)||(48385-48446)
[»] scaffold0529 (1 HSPs)
scaffold0529 (166-233)||(6582-6648)
[»] scaffold0321 (1 HSPs)
scaffold0321 (166-235)||(1777-1846)
[»] scaffold0026 (1 HSPs)
scaffold0026 (166-235)||(144904-144973)
[»] scaffold1243 (1 HSPs)
scaffold1243 (166-235)||(1092-1161)
[»] scaffold0509 (1 HSPs)
scaffold0509 (166-235)||(10666-10735)
[»] scaffold0301 (1 HSPs)
scaffold0301 (166-215)||(9915-9964)
[»] scaffold0036 (1 HSPs)
scaffold0036 (166-235)||(79252-79321)
[»] scaffold0020 (1 HSPs)
scaffold0020 (166-215)||(141572-141621)
[»] scaffold0001 (2 HSPs)
scaffold0001 (166-235)||(31085-31154)
scaffold0001 (166-235)||(36392-36461)
[»] scaffold0107 (1 HSPs)
scaffold0107 (166-213)||(35803-35850)
[»] scaffold0040 (1 HSPs)
scaffold0040 (168-215)||(105236-105283)


Alignment Details
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 103 - 241
Target Start/End: Original strand, 18759302 - 18759443
Alignment:
Q  103 tggaactaatttgagtcaactgcagcgtgtaacaccctgttttcccaactacgaannnnnnnng---cataaatcagagtaaacaactaaaacaggatgc 199  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||         |   |||||||||||||||||||||||||| ||||||    
T  18759302 tggaactaatttgagtcaactgcaccgtgtaacaccccgttttcctaactaagatttttttttgttgcataaatcagagtaaacaactaaaactggatgc 18759401  T
Q  200 tacacttttttcaaatacaaatatattaaagttactgttcat 241  Q
    ||||||| ||||||||||||||||| |||||||||| |||||    
T  18759402 tacacttctttcaaatacaaatatagtaaagttactattcat 18759443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 23946630 - 23946699
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  23946630 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattact 23946699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 28501217 - 28501161
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28501217 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 28501161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18759200 - 18759256
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  18759200 atttttatgcgatagcatgtttattttgtacaaatttttaaatatttaggtgattag 18759256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27893672 - 27893616
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27893672 atttttatgcgataacatgtttattttgtacaaatttctaaatatttaggtgattag 27893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27905911 - 27905855
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27905911 atttttatgcgataacatgtttattttgtacaaatttctaaatatttaggtgattag 27905855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27952330 - 27952274
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  27952330 atttttatgcgataacatgtttattttgtacaaatttctaaatatttaggtgattag 27952274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 22242513 - 22242572
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatat 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  22242513 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatatatatatat 22242572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 22333630 - 22333700
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||  ||||||||||    
T  22333630 gcataaatcagagtaaaacaactaaaacaggatgctacacttctttcaaatataaatatggtaaagttact 22333700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 8497 - 8566
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||| ||||||||||||||||| | ||||||  ||||||| ||||||||||    
T  8497 gcataaatcagagtaaacaactagaacaggatgctacacttctatcaaatttaaatatagtaaagttact 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 23417698 - 23417766
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||  |||||| ||||||||||    
T  23417698 gcataaatcagagtaaacaactaaa-caagatgctacacttctttcaaatattaatatagtaaagttact 23417766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 22585430 - 22585383
Alignment:
Q  169 taaatcagagtaaacaactaaaacaggatgctacacttttttcaaata 216  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22585430 taaatcagagcaaacaactaaaacaggatgctacacttctttcaaata 22585383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 17216938 - 17217007
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||| ||||| ||||| |||||  |||||||| ||||||| |||| |||||    
T  17216938 gcataaatcagagtaaacaactacaacagaatgctgcacttccttcaaatataaatatagtaaaattact 17217007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 20453366 - 20453423
Alignment:
Q  166 gcataaatcagagtaaacaact-aaaacaggatgctacacttttttcaaatacaaata 222  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||| |||||    
T  20453366 gcataaatcagagtaaacaactaaaaacaggatgctacacttccttcaaatataaata 20453423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 6103634 - 6103568
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||| |||||||||| ||||||||||||||||||   ||||||||| ||||||| |||| |||||    
T  6103634 gcataaatcggagtaaacaattaaaacaggatgctacac---tttcaaatataaatatagtaaaattact 6103568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 19664134 - 19664204
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||| ||||| |||||||||||||||||||||||| || ||||||  |||||| |||| |||||    
T  19664134 gcataaatcagtgtaaaacaactaaaacaggatgctacacttcttacaaatatgaatatagtaaaattact 19664204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 20180489 - 20180420
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||  |||||| |||| |||||    
T  20180489 gcataaatcagagtaaaacaactaaa-caggatgttacacttttttcaaatatgaatatagtaaaattact 20180420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 39696544 - 39696480
Alignment:
Q  166 gcataaatcagagtaaacaactaaaaca-ggatgctacacttttttcaaatacaaatatattaaa 229  Q
    |||||||||||||| ||||||||||| | |||||||||||||  |||||||| ||||||| ||||    
T  39696544 gcataaatcagagtgaacaactaaaaaaaggatgctacacttccttcaaatataaatatagtaaa 39696480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 21398285 - 21398354
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| ||||||||  |||||||||||||| |||||||||  |||||| |||| |||||    
T  21398285 gcataaatcagagtaaaacaactaaat-aggatgctacacttctttcaaatatgaatatagtaaaattact 21398354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 21792778 - 21792847
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| ||||||||  |||||||||||||| |||||||||  |||||| |||| |||||    
T  21792778 gcataaatcagagtaaaacaactaaat-aggatgctacacttctttcaaatatgaatatagtaaaattact 21792847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 25850197 - 25850128
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| || ||| || ||||||| |||| |||||    
T  25850197 gcataaatcagagtaaaacaactaaa-caggatgctacacttcttacaattataaatatagtaaaattact 25850128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 15287013 - 15286985
Alignment:
Q  29 tacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||||||||||||||||||    
T  15287013 tacaaatttctaaatatttaggtgattag 15286985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 57
Target Start/End: Complemental strand, 15467382 - 15467354
Alignment:
Q  29 tacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||||||||||||||||||    
T  15467382 tacaaatttctaaatatttaggtgattag 15467354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 11330 - 11261
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  11330 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatataaatatagtaaagttact 11261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 7350 - 7419
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  7350 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaagttact 7419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 25433 - 25370
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaa 229  Q
    |||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||    
T  25433 gcataaattagagtaaacaactaaaacaggatgctacacttcttttaaatataaatatagtaaa 25370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 17367 - 17436
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  17367 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattact 17436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 128119 - 128050
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | ||||||||||    
T  128119 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatataaatacagtaaagttact 128050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 94621 - 94690
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  94621 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattact 94690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 5984482 - 5984551
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||| ||||||||||    
T  5984482 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcgaatacaattatagtaaagttact 5984551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40066255 - 40066311
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40066255 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 40066311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 22670894 - 22670964
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  22670894 gcataaatcagagtaaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaagttact 22670964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 19357145 - 19357214
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| |||| |||||    
T  19357145 gcataaattagagtaaacaactaaaacaggatgctacacttctttcaaatataaatatagtaaaattact 19357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 10898751 - 10898681
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||||||||    
T  10898751 gcataaatcagagtaaaacaactaaaataggatgctacacttctttcaaatataaatatagtaaagttact 10898681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 18390194 - 18390125
Alignment:
Q  167 cataaatcagagtaaacaactaaaa-caggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| | ||| ||||||| |||| |||||    
T  18390194 cataaatcagagtaaacaactaaaaccaggatgctacacttctttaatatataaatatagtaaaattact 18390125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 2524605 - 2524536
Alignment:
Q  166 gcataaatcagagt-aaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||||||  |||||| |||| |||||    
T  2524605 gcataaatcagagtaaaacaact-aaacaggatgatacacttctttcaaatatgaatatagtaaaattact 2524536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 5033346 - 5033277
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||| ||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  5033346 gcataaatcagggtaaaacaactaaa-caggatgctacacttctttcaaatatgaatataataaaattact 5033277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 24514283 - 24514332
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  24514283 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 24514332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 229
Target Start/End: Complemental strand, 24782891 - 24782830
Alignment:
Q  168 ataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaa 229  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| ||||    
T  24782891 ataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaa 24782830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 28654567 - 28654518
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  28654567 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 28654518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 22253600 - 22253553
Alignment:
Q  168 ataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  22253600 ataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 22253553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 59660 - 59728
Alignment:
Q  167 cataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  59660 cataaatcagagtaaataactaaaacaggatgctacacttctttcaaatataaatatagtaaagttact 59728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4808399 - 4808343
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4808399 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 4808343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17728176 - 17728232
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17728176 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 17728232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 32996974 - 32997042
Alignment:
Q  167 cataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||    
T  32996974 cataaatcagagtaaacaactaaaacaggatgccacacttctttcaaatataaatatagtaaagttact 32997042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12767016 - 12766960
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12767016 atttttacgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 12766960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13821830 - 13821886
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13821830 atttttatgcgatagcatctttattttgtacaaatttctaaatatttaggtgattag 13821886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 14552969 - 14553035
Alignment:
Q  169 taaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||| |||| |||||    
T  14552969 taaatgagagtaaacaactaaaacaggatgctgcacttctttcaaatataaatatagtaaaattact 14553035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 17131436 - 17131372
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||| |||||    
T  17131436 aaatcagagtaaacaactaaa-caggatgctacacttctttcaaatataaatatagtaaaattact 17131372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 13700645 - 13700578
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagtta 233  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||| ||||||||    
T  13700645 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatataaatataataaagtta 13700578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 13151561 - 13151492
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||||  |||||| |||| |||||    
T  13151561 gcataaatcagagtaaaacaactaaa-caggatgctacatttttttcaaatatgaatatagtaaaattact 13151492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 36687189 - 36687120
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  36687189 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 36687120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 44373030 - 44373099
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||  |||||| |||| |||||    
T  44373030 gcataaatcagagtaaaacaactaaa-caggatgttacacttttttcaaatatgaatatagtaaaattact 44373099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 44381886 - 44381955
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||| |||||||||||||||||  |||||| |||| |||||    
T  44381886 gcataaatcagagtaaaacaactaaa-caggatgttacacttttttcaaatatgaatatagtaaaattact 44381955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 4070091 - 4070156
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||| |||  |||||  ||||||||| ||||||| |||| |||||    
T  4070091 aaatcagagtaaacaactaaaacagaatgtcacactactttcaaatataaatatagtaaaattact 4070156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 14220934 - 14220866
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||| |||||||||||| ||| |||||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  14220934 gcatatatcagagtaaacgact-aaacagaatgttacacttctttcaaatataaatatagtaaagttact 14220866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 11003379 - 11003433
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatat 225  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||| | ||||||    
T  11003379 aaatcagagtaaacaact-aaacaagatgctacacttctttcaaatatatatatat 11003433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 10660946 - 10660904
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttt 207  Q
    |||||||||| |||||| |||||||||||||||||||||||||    
T  10660946 gcataaatcaaagtaaaacaactaaaacaggatgctacacttt 10660904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 12370385 - 12370454
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||| |||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  12370385 gcataaatcatagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 12370454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 20584340 - 20584389
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  20584340 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 20584389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 32435450 - 32435381
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| |||||||||| |||| |||||||||  |||||| |||| |||||    
T  32435450 gcataaatcagagtaaaacaactaaa-caggatgctatacttctttcaaatatgaatatagtaaaattact 32435381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 11065515 - 11065583
Alignment:
Q  167 cataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||| |||||||| |||||||||||| || |||||||||  |||||| |||| |||||    
T  11065515 cataaatcagagtaaaacaactaaa-caggatgctacagttgtttcaaatatgaatatagtaaaattact 11065583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23607244 - 23607300
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23607244 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 23607300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23838640 - 23838696
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23838640 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 23838696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 25251593 - 25251524
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||| |||| |||||    
T  25251593 gcataaatcagagtaaacaactaaaaccggatgctacacttctttcaaatataaacatagtaaaattact 25251524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 25315378 - 25315309
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| ||| |||| |||||    
T  25315378 gcataaatcagagtaaacaactaaaaccggatgctacacttctttcaaatataaacatagtaaaattact 25315309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 16226164 - 16226228
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||| |||| |||||    
T  16226164 aaatcagagtaaacaactaaa-caggatgctacacttcttttaaatataaatatagtaaaattact 16226228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 20564589 - 20564654
Alignment:
Q  170 aaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||| |||||||| ||||||||||||||| ||| ||||| ||||||| ||||||||||    
T  20564589 aaatcagagtaaaacaactaaa-caggatgctacacttctttaaaatataaatatagtaaagttact 20564654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 198
Target Start/End: Complemental strand, 20470817 - 20470789
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatg 198  Q
    |||||||||||||||||||||||||||||    
T  20470817 aaatcagagtaaacaactaaaacaggatg 20470789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 26760511 - 26760578
Alignment:
Q  168 ataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||| |||||||| ||| ||||||||||| |||||||||  |||||| |||| |||||    
T  26760511 ataaatcagagtaaaacaactaaa-cagaatgctacacttctttcaaatatgaatatagtaaaattact 26760578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 19961 - 20029
Alignment:
Q  167 cataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  19961 cataaatcagagtaaataactaaaacaggatgctacacttctttcaaatataaatatagtaaagttact 20029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 54955738 - 54955682
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54955738 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 54955682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22328070 - 22328126
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  22328070 atttttatgcgatagcatgttcattttgtacaaatttctaaatatttaggtgattag 22328126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 32467944 - 32467874
Alignment:
Q  166 gcataaatcagagtaaacaactaaaa-caggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||| |||| ||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  32467944 gcatatatcaaagtaaacaactaaaaacaggatgctacacttctttcaaatataaatatagtaaagttact 32467874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 15607643 - 15607698
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaata 222  Q
    |||||||||||||||||||||| ||||||||||||||| || ||||||||| |||||    
T  15607643 gcataaatcagagtaaacaact-aaacaggatgctacaattctttcaaatataaata 15607698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 21060880 - 21060943
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaa 229  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||| | ||||||| ||||    
T  21060880 gcataaatcagagtaaacatttaaaacaggatgttacacttctttcaaacataaatatagtaaa 21060943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 9872199 - 9872149
Alignment:
Q  166 gcataaatcagagtaaacaactaaaa-caggatgctacacttttttcaaat 215  Q
    |||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  9872199 gcataaatcagagtaaacaagtaaaaacaggatgctacacttctttcaaat 9872149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 10358360 - 10358291
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  10358360 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 10358291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 14547639 - 14547708
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||  ||||||| |||| |||||    
T  14547639 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatctaaatatagtaaaattact 14547708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 16996555 - 16996618
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaa 229  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| ||||    
T  16996555 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaa 16996618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 25089680 - 25089729
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| ||   |||||||||||||||||| ||||||||    
T  25089680 gcataaatcagagtaaaaaaactaaacaggatgctacacttctttcaaat 25089729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 4859766 - 4859719
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaa 213  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  4859766 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaa 4859719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26083034 - 26082978
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26083034 atttttatgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 26082978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 241
Target Start/End: Original strand, 19674736 - 19674813
Alignment:
Q  166 gcataaatcaga-gtaaacaa-ctaaaacaggatgctacacttttttcaaatacaaatatattaaagttactgttcat 241  Q
    |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||    
T  19674736 gcataaatcagaagtaaacaaactaaaacaggatgctacacttctttcaaatacaaatatagtaaagttactattcat 19674813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24637910 - 24637962
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtga 53  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  24637910 atttttatgcgatagcatgtttattttgtacaaatttttaaatatttaggtga 24637962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 42696072 - 42696139
Alignment:
Q  168 ataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||| || ||| ||| |||| |||||    
T  42696072 ataaatcagaataaacaactgaaacaggatgctacacttttttcaagtataaacatagtaaaattact 42696139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 24725676 - 24725744
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||||||||| ||| | |||| ||||||| ||||||||| ||||||| ||||||||||    
T  24725676 gcataaatcagagtaaacaact-aaatatgatgttacacttctttcaaatataaatatagtaaagttact 24725744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 45753822 - 45753887
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||| ||| ||| |||| |||||    
T  45753822 aaatcaaagtaaacaactaaaacaggatgctacatttctttcaaatataaacatagtaaaattact 45753887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 38889082 - 38889032
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  38889082 gcataaatcagagtaaaacaactcaaacaggatgctacacttctttcaaat 38889032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 51475187 - 51475251
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||||| ||||||||| |||||||| ||| ||||| ||||||| |||| |||||    
T  51475187 aaatcagagtaaacaact-aaacaggattctacacttctttaaaatataaatatagtaaaattact 51475251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 8278027 - 8277978
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  8278027 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 8277978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 22348725 - 22348790
Alignment:
Q  170 aaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||| |||||||| ||||||||||||||| ||| ||||| ||||||| |||| |||||    
T  22348725 aaatcagagtaaaacaactaaa-caggatgctacacttctttaaaatataaatatagtaaaattact 22348790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 48299956 - 48300004
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaa 214  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  48299956 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaa 48300004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 396845 - 396913
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  396845 gcataaatcagagtaaacaactaaa-caggatgctacacttctttcaaatataaatatagtaaagttact 396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 2692 - 2760
Alignment:
Q  167 cataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||    
T  2692 cataaatcaaagtaaacaactaaaataggatgctacacttctttcaaatacacatatagtaaagttact 2760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7409231 - 7409175
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7409231 atttttacgcgatagcatgtttattttgtacaaatttctaaatatttaggtgattag 7409175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 17757719 - 17757650
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| |||| |||||    
T  17757719 gcataaatcagagtaaacaactaaaacaagatgctacacttctttcagatataaatatagtaaaattact 17757650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 31736566 - 31736521
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31736566 aaatcagagtaaacaactaaaacaggatgctacacttctttaaaat 31736521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 20412734 - 20412665
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  20412734 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 20412665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 23498896 - 23498832
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||||| |||||||||| ||||||| ||| |||| |||||||| |||| |||||    
T  23498896 aaatcagagtaaacaact-aaacaggatgttacacttctttaaaatgcaaatatagtaaaattact 23498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 1642003 - 1642052
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  1642003 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 1642052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 27127447 - 27127398
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  27127447 gcataaatcagagtaaaacaactaaa-caggatgctacacttatttcaaat 27127398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 15025266 - 15025202
Alignment:
Q  167 cataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagt 231  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||    
T  15025266 cataaatcagagtaaacaactaaaacaggatgctacacttcttttaaatataaatatagtaaagt 15025202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 20416473 - 20416523
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaata 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20416473 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaata 20416523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 35066531 - 35066462
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||||||||||| | ||||| ||||||||| ||||||| |||| |||||    
T  35066531 gcataaatcagagtaaacaactaaaacaggatgatgcacttctttcaaatataaatatagtaaaattact 35066462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23008756 - 23008812
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  23008756 atttttatgcgatggcatgtttattttgtacaaatttctaaatatttagatgattag 23008812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 16727525 - 16727595
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||| |||||||| |||||||||||||||||||||||| || ||||||  |||||| |||| |||||    
T  16727525 gcataaattagagtaaaacaactaaaacaggatgctacacttcttacaaatatgaatatagtaaaattact 16727595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 22308607 - 22308538
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  22308607 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 22308538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 8493169 - 8493122
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaa 213  Q
    |||| ||||||||||||||||||||||||||||||  |||| ||||||    
T  8493169 gcatgaatcagagtaaacaactaaaacaggatgctgtacttctttcaa 8493122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 5213868 - 5213917
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    |||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  5213868 gcatgaatcagagtaaaacaactaaa-caggatgctacacttttttcaaat 5213917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 41174513 - 41174464
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  41174513 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 41174464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 14440134 - 14440202
Alignment:
Q  166 gcataaatcagagt-aaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttac 234  Q
    |||||||||||||| |||||||| |||||||||| ||||||| |||||||||  |||||| |||| ||||    
T  14440134 gcataaatcagagtaaaacaact-aaacaggatgatacacttctttcaaataagaatatagtaaaattac 14440202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 19574041 - 19574078
Alignment:
Q  170 aaatcagagtaaacaact-aaaacaggatgctacactt 206  Q
    |||||||||||||||||| |||||||||||||||||||    
T  19574041 aaatcagagtaaacaactaaaaacaggatgctacactt 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 24545167 - 24545200
Alignment:
Q  172 atcagagtaaacaactaaaacaggatgctacact 205  Q
    ||||||||||||||||||||||||||| ||||||    
T  24545167 atcagagtaaacaactaaaacaggatgttacact 24545200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 24554203 - 24554170
Alignment:
Q  172 atcagagtaaacaactaaaacaggatgctacact 205  Q
    ||||||||||||||||||||||||||| ||||||    
T  24554203 atcagagtaaacaactaaaacaggatgttacact 24554170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 24557265 - 24557232
Alignment:
Q  172 atcagagtaaacaactaaaacaggatgctacact 205  Q
    ||||||||||||||||||||||||||| ||||||    
T  24557265 atcagagtaaacaactaaaacaggatgttacact 24557232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 44268534 - 44268582
Alignment:
Q  167 cataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  44268534 cataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 44268582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 52312281 - 52312217
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||  || |||||||||||| ||| ||||| ||||||| |||| |||||    
T  52312281 aaatcagagtaaacaactaat-catgatgctacacttctttaaaatataaatatagtaaaattact 52312217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 5005 - 5055
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaata 216  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5005 gcataaatcagagtaaacaactaaaacaggatgctacacttctttcaaata 5055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 572 - 640
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||||| ||||||||||    
T  572 gcataaatcagagtaaacaactaaa-cagaatgctacacttctttcaaatataaatatagtaaagttact 640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 16787 - 16856
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| ||||||  |||| ||||||||||    
T  16787 gcataaattagagtaaacaactaaaacaggatgctacacttctttcgaatacatttatagtaaagttact 16856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 171483 - 171408
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttactgttcat 241  Q
    ||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||| |||||||||| |||||    
T  171483 gcataaatcagagtaaaacaactaaa-caggatgctacacttcgttcaaatacaaatatagtaaagttactattcat 171408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8329 - 8385
Alignment:
Q  1 atttttatgcgatagcatgtttattttttacaaatttctaaatatttaggtgattag 57  Q
    ||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  8329 atttttatgtgatggcatgtttattttgtacaaatttataaatatttaggtgattag 8385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 330475 - 330400
Alignment:
Q  166 gcataaatcagagtaaac-aactaaaacaggatgctacacttttttcaaatacaaatatattaaagttactgttcat 241  Q
    |||||||||||||||||  ||||||| |||||| |||||||| ||||||||||||||||| |||||||||| |||||    
T  330475 gcataaatcagagtaaaataactaaa-caggattctacacttctttcaaatacaaatatagtaaagttactattcat 330400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 108570 - 108635
Alignment:
Q  170 aaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||| ||||||||||||||||||||  |||||  ||||||||| ||||| | |||| |||||    
T  108570 aaatcagaataaacaactaaaacaggatgtcacactactttcaaatataaatagaataaaattact 108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 4222 - 4287
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    |||||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||| ||||||||||    
T  4222 gcataaatcagagtaaacaact-aaacaggatgctacac---tttcaaatataaatatagtaaagttact 4287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 10344 - 10275
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||  |||||| |||| |||||    
T  10344 gcataaatcagagtaaaacaactaaa-caggatgctacacttttttcaaatatgaatatagtaaaattact 10275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 69527 - 69460
Alignment:
Q  168 ataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||| ||||||| |||| |||||    
T  69527 ataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatataaatatagtaaaattact 69460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 229
Target Start/End: Original strand, 27630 - 27694
Alignment:
Q  166 gcataaatcagagtaaacaact-aaaacaggatgctacacttttttcaaatacaaatatattaaa 229  Q
    |||||||||||||||||||||| |||| ||||||||||||||  |||||||| ||||||| ||||    
T  27630 gcataaatcagagtaaacaactaaaaataggatgctacacttccttcaaatataaatatagtaaa 27694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 235
Target Start/End: Complemental strand, 48446 - 48385
Alignment:
Q  173 tcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||| ||||| ||||||||| || ||||||||| ||||||| |||| |||||    
T  48446 tcagagtaaacaact-aaacaagatgctacaattctttcaaatataaatatagtaaaattact 48385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 6582 - 6648
Alignment:
Q  166 gcataaatcagagtaaacaactaaaacaggatgctacacttttttcaaatacaaatatattaaagtta 233  Q
    |||||||| ||||||||||||| |||||| ||| ||||||| ||||||||| ||||||| ||||||||    
T  6582 gcataaattagagtaaacaact-aaacagaatgatacacttctttcaaatataaatatagtaaagtta 6648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 1846 - 1777
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  1846 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 1777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 144904 - 144973
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||  |||||| |||| |||||    
T  144904 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaatatgaatatagtaaaattact 144973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1243 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1243
Description:

Target: scaffold1243; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 1161 - 1092
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| ||||||||||||||| || ||||||  |||||| |||| |||||    
T  1161 gcataaatcagagtaaaacaactaaa-caggatgctacacttcttacaaataggaatatagtaaaattact 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 10735 - 10666
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| || |||||||||||| |||||||||  |||||| |||| |||||    
T  10735 gcataaatcagagtaaaacaactaaa-catgatgctacacttctttcaaatatgaatatagtaaaattact 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 9964 - 9915
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  9964 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 9915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 79321 - 79252
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| || |||||||||||| |||||||||  |||||| |||| |||||    
T  79321 gcataaatcagagtaaaacaactaaa-caagatgctacacttctttcaaatatgaatatagtaaaattact 79252  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 141572 - 141621
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  141572 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 141621  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 31085 - 31154
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| |||||||||||| || |||||||||  |||||| |||| |||||    
T  31085 gcataaatcagagtaaaacaactaaa-caggatgctacaattctttcaaatatgaatatagtaaaattact 31154  T

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Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 36392 - 36461
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaatacaaatatattaaagttact 235  Q
    ||||||||||||||||| |||||||| |||||||||||| || |||||||||  |||||| |||| |||||    
T  36392 gcataaatcagagtaaaacaactaaa-caggatgctacaattctttcaaatatgaatatagtaaaattact 36461  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 35850 - 35803
Alignment:
Q  166 gcataaatcagagtaaa-caactaaaacaggatgctacacttttttcaa 213  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  35850 gcataaatcagagtaaaacaactaaa-caggatgctacacttctttcaa 35803  T

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Target: scaffold0040 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 105283 - 105236
Alignment:
Q  168 ataaatcagagtaaa-caactaaaacaggatgctacacttttttcaaat 215  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  105283 ataaatcagagtaaaacaactaaa-caggatgctacacttctttcaaat 105236  T

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