View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6316_high_30 (Length: 217)

Name: NF6316_high_30
Description: NF6316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6316_high_30
NF6316_high_30
[»] scaffold0006 (6 HSPs)
scaffold0006 (120-216)||(113413-113507)
scaffold0006 (100-216)||(174566-174680)
scaffold0006 (100-216)||(189974-190088)
scaffold0006 (121-214)||(142490-142580)
scaffold0006 (124-216)||(210322-210412)
scaffold0006 (120-216)||(118186-118280)
[»] chr1 (12 HSPs)
chr1 (100-216)||(13676984-13677098)
chr1 (119-216)||(13516631-13516726)
chr1 (100-216)||(13595823-13595937)
chr1 (120-216)||(20485813-20485907)
chr1 (120-216)||(20377296-20377390)
chr1 (120-216)||(20511191-20511285)
chr1 (139-211)||(16492531-16492603)
chr1 (121-214)||(13652729-13652819)
chr1 (102-210)||(13552090-13552196)
chr1 (139-216)||(16454438-16454515)
chr1 (145-217)||(15896419-15896491)
chr1 (166-216)||(16463595-16463645)
[»] chr2 (3 HSPs)
chr2 (102-216)||(38053184-38053296)
chr2 (102-212)||(38055386-38055494)
chr2 (102-210)||(30703237-30703343)
[»] chr8 (8 HSPs)
chr8 (119-216)||(20772527-20772622)
chr8 (119-216)||(20782321-20782416)
chr8 (104-210)||(20769584-20769688)
chr8 (104-210)||(20779378-20779482)
chr8 (120-216)||(20806455-20806549)
chr8 (120-216)||(20835367-20835461)
chr8 (120-216)||(20850236-20850330)
chr8 (120-216)||(20842137-20842231)
[»] scaffold0460 (2 HSPs)
scaffold0460 (120-216)||(6802-6896)
scaffold0460 (120-216)||(11367-11461)
[»] scaffold0069 (2 HSPs)
scaffold0069 (120-216)||(47598-47692)
scaffold0069 (120-216)||(41922-42016)
[»] chr6 (3 HSPs)
chr6 (140-217)||(22274077-22274154)
chr6 (140-217)||(22278843-22278920)
chr6 (121-216)||(21816499-21816592)
[»] scaffold0068 (1 HSPs)
scaffold0068 (120-209)||(34600-34687)
[»] scaffold0012 (1 HSPs)
scaffold0012 (124-216)||(120197-120287)


Alignment Details
Target: scaffold0006 (Bit Score: 62; Significance: 6e-27; HSPs: 6)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 113413 - 113507
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||||| |  |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||||||||    
T  113413 caatacaattgttttcaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttctggtatggtcaactt 113507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 174566 - 174680
Alignment:
Q  100 catttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaat 199  Q
    |||||||||||| ||||| || |||||||||||||  |  ||||||||||||||||||| ||| | ||||||||| |||||||||||||| |||||||||    
T  174566 catttgtttgaattaacacgcgatacaattgtttt--tgcaggtgggatttggtagtttcaagcatttaaaactaactgaatatcccgagctaaaagaat 174663  T
Q  200 tatggtatggtcaactt 216  Q
    | |||||||||||||||    
T  174664 tgtggtatggtcaactt 174680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 189974 - 190088
Alignment:
Q  100 catttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaat 199  Q
    |||||||||||| ||||| || |||||||||||||  |  ||||||||||||||||||| ||| | ||||||||| |||||||||||||| |||||||||    
T  189974 catttgtttgaattaacacgcgatacaattgtttt--tgcaggtgggatttggtagtttcaagcatttaaaactaactgaatatcccgagctaaaagaat 190071  T
Q  200 tatggtatggtcaactt 216  Q
    | |||||||||||||||    
T  190072 tgtggtatggtcaactt 190088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 142490 - 142580
Alignment:
Q  121 aatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaac 214  Q
    ||||||||||||||   | |||||||||||| |||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  142490 aatacaattgtttt---acaggtgggatttgttagtttcaagcatttacaactatctgaatatcccgagttaaaagaattgtggtatggtcaac 142580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 210322 - 210412
Alignment:
Q  124 acaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||| |  |||||||||| |||||||  || | |||||||||||||||||||||||||||||||| || |||||||| ||||||    
T  210322 acaattgttttcaca--ggtgggattttgtagtttcgagcatttaaaactatctgaatatcccgagttaaaagagttctggtatggccaactt 210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 118186 - 118280
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||| | |  |||||||||||||||||| ||| | |||||||| ||||||||||| ||  | ||||| || |||||||||| ||||    
T  118186 caatacaattgttttaaca--ggtgggatttggtagtttcaagcatttaaaactgtctgaatatcctgaccttaaagagttctggtatggtcgactt 118280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 13676984 - 13677098
Alignment:
Q  100 catttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaat 199  Q
    |||||||||||| ||||| || |||||||||||||  |  ||||||||||||||||||| ||| | ||||||||| |||||||||||||| |||||||||    
T  13676984 catttgtttgaattaacacgcgatacaattgtttt--tgcaggtgggatttggtagtttcaagcatttaaaactaactgaatatcccgagctaaaagaat 13677081  T
Q  200 tatggtatggtcaactt 216  Q
    | |||||||||||||||    
T  13677082 tgtggtatggtcaactt 13677098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 13516631 - 13516726
Alignment:
Q  119 gcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||||| |  |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  13516631 gcaatacaattgttttcaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcgactt 13516726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 13595823 - 13595937
Alignment:
Q  100 catttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaat 199  Q
    |||||||||||| ||||| || |||||||||||||  |  ||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||||| |    
T  13595823 catttgtttgaattaacacgcgatacaattgtttt--tgcaggtgggatttggcagtttcaagcatttaaaactatctgaatatcccgagttaaaagagt 13595920  T
Q  200 tatggtatggtcaactt 216  Q
    | |||||||||| ||||    
T  13595921 tgtggtatggtcgactt 13595937  T

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Target: chr1; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 20485813 - 20485907
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||  || ||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  20485813 caatacaattgtttt--tacaggtgggatttggtagtttcaagcatttaaaactatctgaatatcctgagttaaaagagttctggtatggtcaactt 20485907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 20377296 - 20377390
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||||| |  ||||||||||||| |||| ||| | |||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  20377296 caatacaattgttttcaca--ggtgggatttggtggtttcaagcatttaaaactatctgaatttcccgagttaaaagagttctggtatggtcaactt 20377390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 20511285 - 20511191
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||||| |  ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  20511285 caatacaattgttttcaca--ggtgggatttggtggtttcaagcatttaaaactatctgaatatcccgagttaaaagagttctggtacggtcaactt 20511191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 16492603 - 16492531
Alignment:
Q  139 taggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtc 211  Q
    ||||||| |||||||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  16492603 taggtggcatttggtagtttcaagcatttaaaactatctgaatatcccgaattaaaagaattatggtatggtc 16492531  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 13652729 - 13652819
Alignment:
Q  121 aatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaac 214  Q
    ||||||||||||||   | |||||||||||| |||||| ||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13652729 aatacaattgtttt---acaggtgggatttgttagtttcaagcatttacaactatctgaatatcccgagttaaaagaattgtggtatggtcaac 13652819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 13552090 - 13552196
Alignment:
Q  102 tttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaatta 201  Q
    |||||||||| ||||  ||||||||||||||||  || |||||| |||||||||||| ||  | |||||| ||||||||||||||||| ||||||||||     
T  13552090 tttgtttgaactaactcgcaatacaattgtttt--tacaggtggcatttggtagtttcaaacatttaaaattatctgaatatcccgagctaaaagaattg 13552187  T
Q  202 tggtatggt 210  Q
    |||||||||    
T  13552188 tggtatggt 13552196  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 16454515 - 16454438
Alignment:
Q  139 taggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||  ||||||||||| ||| | |||||||||||||| ||||| |||||||||||||||||||||||| |||||    
T  16454515 taggtggcctttggtagtttcaagcatttaaaactatctgagtatcctgagttaaaagaattatggtatggtaaactt 16454438  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 217
Target Start/End: Complemental strand, 15896491 - 15896419
Alignment:
Q  145 ggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaacttc 217  Q
    |||||||||||||| ||| | |||||||| ||||| ||||| |||||||||||| | ||||||||||||||||    
T  15896491 ggatttggtagtttcaagcatttaaaactttctgattatcctgagttaaaagaaatgtggtatggtcaacttc 15896419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 16463645 - 16463595
Alignment:
Q  166 ttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||| |||||    
T  16463645 ttaaaactatctgagtatcctgagttaaaagaatcatggtatggtaaactt 16463595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 38053296 - 38053184
Alignment:
Q  102 tttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaatta 201  Q
    ||||| |||| ||||||| ||||||||||||||  |  ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||     
T  38053296 tttgtgtgaactaacatgaaatacaattgtttt--tgcaggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttg 38053199  T
Q  202 tggtatggtcaactt 216  Q
    |||||||||| ||||    
T  38053198 tggtatggtcgactt 38053184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 38055494 - 38055386
Alignment:
Q  102 tttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaatta 201  Q
    ||||||| || ||||  ||||||||||||||||  ||||||||| |||||||||||| ||| | || || |||||||||||||||||||||||||| ||     
T  38055494 tttgtttaaactaactcgcaatacaattgtttt--tataggtggcatttggtagtttcaagcattttaacctatctgaatatcccgagttaaaagacttg 38055397  T
Q  202 tggtatggtca 212  Q
    |||||||||||    
T  38055396 tggtatggtca 38055386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 30703343 - 30703237
Alignment:
Q  102 tttgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaatta 201  Q
    ||||||| || |||| |||||||| ||||||||  |  ||||||||||||||||||| | | | |||||||||| | | |||||||| ||||||||| |     
T  30703343 tttgtttaaactaacttgcaatacgattgtttt--tgcaggtgggatttggtagtttcaggcatttaaaactattttattatcccgacttaaaagaagtg 30703246  T
Q  202 tggtatggt 210  Q
    |||||||||    
T  30703245 tggtatggt 30703237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 20772622 - 20772527
Alignment:
Q  119 gcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||||| |  |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20772622 gcaatacaattgttttcaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcgactt 20772527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 20782416 - 20782321
Alignment:
Q  119 gcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||||| |  |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20782416 gcaatacaattgttttcaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcgactt 20782321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 20769688 - 20769584
Alignment:
Q  104 tgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatg 203  Q
    |||||||| ||||  ||||||||||||||||  || |||||| |||||||||||| ||| | |||||||||||||||||||||||| |||||||||| ||    
T  20769688 tgtttgaactaactcgcaatacaattgtttt--tacaggtggcatttggtagtttcaagcatttaaaactatctgaatatcccgagctaaaagaattgtg 20769591  T
Q  204 gtatggt 210  Q
    |||||||    
T  20769590 gtatggt 20769584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 210
Target Start/End: Complemental strand, 20779482 - 20779378
Alignment:
Q  104 tgtttgaaataacatgcaatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatg 203  Q
    |||||||| ||||  ||||||||||||||||  || |||||| |||||||||||| ||| | |||||||||||||||||||||||| |||||||||| ||    
T  20779482 tgtttgaactaactcgcaatacaattgtttt--tacaggtggcatttggtagtttcaagcatttaaaactatctgaatatcccgagctaaaagaattgtg 20779385  T
Q  204 gtatggt 210  Q
    |||||||    
T  20779384 gtatggt 20779378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 20806549 - 20806455
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||| | |  |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||| ||||    
T  20806549 caatacaattgttttaaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcgactt 20806455  T

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Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 20835461 - 20835367
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||| ||||||| |  |||||||||||||||||| ||| | ||||||||||||||||||||| |||||||| | || ||||| |||||||||    
T  20835461 caatacaatagttttcaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcccaagttaaaaaagttctggtacggtcaactt 20835367  T

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Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 20850330 - 20850236
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||| | |  ||||||||||||||| || ||| | |||||||||||||||||||| || |||||||| || |||||||||| ||||    
T  20850330 caatacaattgttttaaca--ggtgggatttggtagattcaagcatttaaaactatctgaatatcctgatttaaaagagttctggtatggtcgactt 20850236  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 20842231 - 20842137
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||| | |  |||||||||||||||||| ||| | |||||||| ||||||||||| ||  | ||||| || |||||||||| ||||    
T  20842231 caatacaattgttttaaca--ggtgggatttggtagtttcaagcatttaaaactgtctgaatatcctgaccttaaagagttctggtatggtcgactt 20842137  T

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Target: scaffold0460 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 6802 - 6896
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||  || ||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  6802 caatacaattgtttt--tacaggtgggatttggtagtttcaagcatttaaaactatctgaatatcctgagttaaaagagttctggtatggtcaactt 6896  T

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Target: scaffold0460; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 11367 - 11461
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    |||||||||||||||  || ||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||| || |||||||||||||||    
T  11367 caatacaattgtttt--tacaggtgggatttggtagtttcaagcatttaaaactatctgaatatcctgagttaaaagagttctggtatggtcaactt 11461  T

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Target: scaffold0069 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 47598 - 47692
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||||| |  ||||||||||||| |||| ||| | |||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  47598 caatacaattgttttcaca--ggtgggatttggtggtttcaagcatttaaaactatctgaatttcccgagttaaaagagttctggtatggtcaactt 47692  T

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Target: scaffold0069; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 41922 - 42016
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||| | |  |||||||||||||||||| ||| | |||||||||||||||||||| ||  | |||||||| |||||||||| ||||    
T  41922 caatacaattgttttaaca--ggtgggatttggtagtttcaagcatttaaaactatctgaatatcctgaccttaaagaattctggtatggtcgactt 42016  T

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Target: chr6 (Bit Score: 50; Significance: 8e-20; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 22274154 - 22274077
Alignment:
Q  140 aggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaacttc 217  Q
    |||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  22274154 aggtggcatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcatcttc 22274077  T

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Target: chr6; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 22278920 - 22278843
Alignment:
Q  140 aggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaacttc 217  Q
    |||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||| || ||||||||||| ||||    
T  22278920 aggtggcatttggtagtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatggtcatcttc 22278843  T

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Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 21816499 - 21816592
Alignment:
Q  121 aatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||||  || || |||||||||||||||| ||| | |||| ||||||||||||||||||||||||||| || |||||||||| ||||    
T  21816499 aatacaattgtttt--tacagctgggatttggtagtttcaagcatttaatactatctgaatatcccgagttaaaagagttgtggtatggtcgactt 21816592  T

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Target: scaffold0068 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 34687 - 34600
Alignment:
Q  120 caatacaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatgg 209  Q
    ||||||||||||||| | |  ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||| || ||||||||    
T  34687 caatacaattgttttaaca--ggtgggatttggtggtttcaagcatttaaaactatctgaatatcccgagttaaaagagttgtggtatgg 34600  T

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Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 120197 - 120287
Alignment:
Q  124 acaattgttttcatataggtgggatttggtagtttgaagaagttaaaactatctgaatatcccgagttaaaagaattatggtatggtcaactt 216  Q
    ||||||||||||| |  |||||||||| |||||||  || | |||||||||| ||||||||||||||||||||| || |||||||| ||||||    
T  120197 acaattgttttcaca--ggtgggattttgtagtttcgagcatttaaaactatttgaatatcccgagttaaaagagttctggtatggccaactt 120287  T

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