View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6316_low_18 (Length: 319)

Name: NF6316_low_18
Description: NF6316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6316_low_18
NF6316_low_18
[»] chr1 (15 HSPs)
chr1 (19-251)||(47063036-47063268)
chr1 (262-302)||(46181680-46181720)
chr1 (176-216)||(47023573-47023613)
chr1 (178-251)||(47061509-47061581)
chr1 (262-302)||(5973097-5973137)
chr1 (262-302)||(12740484-12740524)
chr1 (262-302)||(19037175-19037215)
chr1 (262-302)||(19171198-19171238)
chr1 (262-302)||(51657276-51657316)
chr1 (277-306)||(21983819-21983848)
chr1 (262-302)||(22018523-22018563)
chr1 (262-306)||(22153031-22153075)
chr1 (262-302)||(39194924-39194964)
chr1 (161-238)||(47029437-47029516)
chr1 (262-306)||(48571081-48571125)
[»] scaffold0859 (1 HSPs)
scaffold0859 (262-306)||(2176-2220)
[»] chr8 (15 HSPs)
chr8 (262-306)||(30422337-30422381)
chr8 (262-306)||(45539391-45539435)
chr8 (262-302)||(9340567-9340607)
chr8 (262-302)||(40002385-40002425)
chr8 (262-302)||(40213982-40214022)
chr8 (262-305)||(16376236-16376279)
chr8 (262-302)||(26735793-26735834)
chr8 (262-306)||(1210607-1210651)
chr8 (262-306)||(6406961-6407005)
chr8 (262-302)||(7019234-7019274)
chr8 (262-302)||(9767963-9768002)
chr8 (262-306)||(13431525-13431569)
chr8 (262-306)||(17287070-17287114)
chr8 (262-306)||(18122039-18122083)
chr8 (262-302)||(22212179-22212219)
[»] chr5 (15 HSPs)
chr5 (262-306)||(3246349-3246393)
chr5 (262-312)||(37395372-37395422)
chr5 (262-306)||(15439503-15439548)
chr5 (262-302)||(13533186-13533226)
chr5 (262-302)||(17456631-17456671)
chr5 (262-302)||(21702443-21702483)
chr5 (262-302)||(40033673-40033713)
chr5 (262-305)||(2157158-2157201)
chr5 (262-301)||(6037369-6037408)
chr5 (262-302)||(31834385-31834426)
chr5 (262-302)||(17446015-17446055)
chr5 (263-303)||(23407538-23407578)
chr5 (262-302)||(23477581-23477621)
chr5 (262-302)||(32753266-32753306)
chr5 (277-305)||(34637730-34637758)
[»] chr4 (16 HSPs)
chr4 (262-302)||(49002766-49002806)
chr4 (262-306)||(54679064-54679108)
chr4 (262-303)||(22190048-22190089)
chr4 (262-302)||(4947772-4947812)
chr4 (262-302)||(11514469-11514509)
chr4 (262-302)||(14836889-14836929)
chr4 (262-302)||(18078693-18078733)
chr4 (262-302)||(19570450-19570490)
chr4 (262-302)||(25656565-25656605)
chr4 (262-302)||(31267577-31267617)
chr4 (262-302)||(33377573-33377613)
chr4 (262-303)||(15560473-15560514)
chr4 (262-302)||(55650756-55650797)
chr4 (262-298)||(5872806-5872842)
chr4 (262-302)||(17199277-17199317)
chr4 (262-306)||(40859910-40859954)
[»] chr2 (15 HSPs)
chr2 (262-306)||(24450302-24450346)
chr2 (262-306)||(28702075-28702119)
chr2 (262-306)||(45087848-45087892)
chr2 (262-302)||(1041538-1041578)
chr2 (262-302)||(28732703-28732743)
chr2 (262-302)||(29243611-29243651)
chr2 (262-302)||(9774101-9774142)
chr2 (262-302)||(20319511-20319552)
chr2 (262-302)||(22773744-22773785)
chr2 (277-305)||(20567451-20567479)
chr2 (262-306)||(22782482-22782526)
chr2 (262-306)||(28551771-28551815)
chr2 (262-306)||(31328824-31328868)
chr2 (262-306)||(31335545-31335589)
chr2 (262-302)||(38040801-38040841)
[»] scaffold0116 (1 HSPs)
scaffold0116 (262-304)||(21797-21839)
[»] chr7 (18 HSPs)
chr7 (262-304)||(13259354-13259396)
chr7 (262-304)||(13261586-13261628)
chr7 (262-303)||(1559955-1559996)
chr7 (262-302)||(4433453-4433493)
chr7 (262-302)||(6045143-6045183)
chr7 (262-302)||(14746532-14746572)
chr7 (262-302)||(18440594-18440634)
chr7 (262-302)||(24883256-24883296)
chr7 (262-304)||(11792075-11792117)
chr7 (262-312)||(16557513-16557563)
chr7 (262-312)||(16608099-16608149)
chr7 (262-304)||(19237970-19238012)
chr7 (262-302)||(1251766-1251807)
chr7 (262-303)||(48806795-48806836)
chr7 (262-302)||(8932964-8933003)
chr7 (262-306)||(15705402-15705446)
chr7 (262-302)||(21284287-21284327)
chr7 (266-302)||(38594542-38594578)
[»] chr3 (27 HSPs)
chr3 (262-303)||(2025303-2025344)
chr3 (262-302)||(4433174-4433214)
chr3 (262-302)||(13601647-13601687)
chr3 (262-306)||(16031710-16031754)
chr3 (262-302)||(17910787-17910827)
chr3 (262-302)||(17960815-17960855)
chr3 (262-302)||(19888135-19888175)
chr3 (262-302)||(21735586-21735626)
chr3 (262-302)||(22150414-22150454)
chr3 (262-302)||(24707339-24707379)
chr3 (262-306)||(27849436-27849480)
chr3 (262-302)||(28165390-28165430)
chr3 (262-306)||(28581302-28581346)
chr3 (262-304)||(2560392-2560434)
chr3 (262-302)||(29461997-29462038)
chr3 (277-306)||(40799112-40799141)
chr3 (262-302)||(51340181-51340222)
chr3 (262-302)||(4403687-4403727)
chr3 (262-302)||(9994674-9994714)
chr3 (262-306)||(14954617-14954661)
chr3 (262-298)||(15663523-15663559)
chr3 (262-302)||(15848310-15848350)
chr3 (262-302)||(16076342-16076382)
chr3 (262-302)||(17282214-17282254)
chr3 (262-306)||(21639187-21639231)
chr3 (262-302)||(41044910-41044950)
chr3 (262-302)||(45862511-45862551)
[»] scaffold0391 (1 HSPs)
scaffold0391 (262-302)||(3041-3081)
[»] scaffold0267 (1 HSPs)
scaffold0267 (262-302)||(7178-7218)
[»] scaffold0068 (1 HSPs)
scaffold0068 (262-302)||(11427-11467)
[»] scaffold0047 (1 HSPs)
scaffold0047 (262-302)||(33723-33763)
[»] scaffold0038 (1 HSPs)
scaffold0038 (262-302)||(52556-52596)
[»] scaffold0028 (1 HSPs)
scaffold0028 (262-302)||(13975-14015)
[»] chr6 (16 HSPs)
chr6 (262-302)||(12352942-12352982)
chr6 (262-302)||(16124326-16124366)
chr6 (262-302)||(19453460-19453500)
chr6 (262-306)||(19833888-19833932)
chr6 (262-302)||(28252356-28252396)
chr6 (262-302)||(32756766-32756806)
chr6 (262-302)||(33866508-33866548)
chr6 (262-307)||(12041063-12041108)
chr6 (262-302)||(20634889-20634930)
chr6 (262-303)||(26588804-26588845)
chr6 (277-306)||(33353146-33353175)
chr6 (262-302)||(7752031-7752071)
chr6 (262-306)||(16332935-16332979)
chr6 (262-302)||(22385973-22386013)
chr6 (262-306)||(24471264-24471308)
chr6 (262-302)||(31930812-31930852)
[»] scaffold0622 (1 HSPs)
scaffold0622 (262-305)||(1873-1916)
[»] scaffold0004 (1 HSPs)
scaffold0004 (262-305)||(87574-87617)
[»] scaffold0002 (2 HSPs)
scaffold0002 (262-301)||(476156-476195)
scaffold0002 (262-301)||(482676-482715)
[»] scaffold0752 (1 HSPs)
scaffold0752 (262-299)||(624-661)
[»] scaffold0509 (1 HSPs)
scaffold0509 (262-302)||(12228-12269)
[»] scaffold0359 (1 HSPs)
scaffold0359 (277-306)||(6584-6613)
[»] scaffold0349 (1 HSPs)
scaffold0349 (262-302)||(10150-10191)
[»] scaffold0280 (1 HSPs)
scaffold0280 (277-306)||(3542-3571)
[»] scaffold0217 (1 HSPs)
scaffold0217 (277-306)||(18257-18286)
[»] scaffold0113 (1 HSPs)
scaffold0113 (262-303)||(2404-2445)
[»] scaffold0084 (1 HSPs)
scaffold0084 (262-302)||(57605-57646)
[»] scaffold1539 (1 HSPs)
scaffold1539 (262-302)||(1568-1608)
[»] scaffold0738 (1 HSPs)
scaffold0738 (262-302)||(5623-5663)
[»] scaffold0547 (1 HSPs)
scaffold0547 (262-302)||(133-173)
[»] scaffold0525 (1 HSPs)
scaffold0525 (262-302)||(7064-7103)
[»] scaffold0439 (1 HSPs)
scaffold0439 (262-306)||(7568-7612)
[»] scaffold0201 (1 HSPs)
scaffold0201 (277-305)||(18427-18455)
[»] scaffold0154 (1 HSPs)
scaffold0154 (263-303)||(34931-34971)
[»] scaffold0073 (1 HSPs)
scaffold0073 (262-302)||(57757-57797)
[»] scaffold0045 (1 HSPs)
scaffold0045 (262-306)||(88459-88503)
[»] scaffold0007 (1 HSPs)
scaffold0007 (262-306)||(63542-63586)


Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-121; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 251
Target Start/End: Complemental strand, 47063268 - 47063036
Alignment:
Q  19 aagagcgtgcgtttgtgattgtgatcgtccatcttattattattggatgcaaggaattgtatagagagatactgactgtgagtttgcaaggaattgaaaa 118  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47063268 aagagtgtgcgtttgtgattgtgatcgtccatcttattattattggatgcaaggaattgtatagagagatactgaatgtgagtttgcaaggaattgaaaa 47063169  T
Q  119 atactacttagtacaacaaatgccaagttgggggtgagagtggagagtagatagtagaaataacgcctggtagtcccacatcgctccaaagaaacatttc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47063168 atactacttagtacaacaaatgccaagttgggggtgagagtggagagtagatagtagaaataacgcctggtagtcccacatcgctgcaaagaaacatttc 47063069  T
Q  219 atacatcaacatgtattatacataaatgctttt 251  Q
    |||||||||||||||||||||||||||||||||    
T  47063068 atacatcaacatgtattatacataaatgctttt 47063036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 46181720 - 46181680
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  46181720 aaaaacacaagaagaggggttgaattgtgttttctttttct 46181680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 47023613 - 47023573
Alignment:
Q  176 aaataacgcctggtagtcccacatcgctccaaagaaacatt 216  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  47023613 aaataacgccttgtagtcccacatcgctccaaagaaacatt 47023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 47061581 - 47061509
Alignment:
Q  178 ataacgcctggtagtcccacatcgctccaaagaaacatttcatacatc-aacatgtattatacataaatgctttt 251  Q
    |||||||||  ||||||||||||||| |||||||||||| |||||||| ||||||| ||||  ||||||||||||    
T  47061581 ataacgccttttagtcccacatcgcttcaaagaaacattgcatacatcaaacatgttttat--ataaatgctttt 47061509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 5973097 - 5973137
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  5973097 aaaaacacaagaaggggggttgaattgtgttttctttttct 5973137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 12740484 - 12740524
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  12740484 aaaaacacaagaaggggggttgaattgtgttttctttttct 12740524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 19037175 - 19037215
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19037175 aaaaacacaagaaggggggttgaattgtgttttctttttct 19037215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 19171238 - 19171198
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19171238 aaaaacacaagaaggggggttgaattgtgttttctttttct 19171198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 51657316 - 51657276
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  51657316 aaaaacacaagaaggggggttgaattgtgttttctttttct 51657276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 21983819 - 21983848
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  21983819 ggggttgaattgtgttttctttttcttctt 21983848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 22018523 - 22018563
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  22018523 aaaaacacaagaagggggggtgaattgtgttttctttttct 22018563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 22153031 - 22153075
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  22153031 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 22153075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 39194964 - 39194924
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  39194964 aaaaacacaagagggggggttgaattgtgttttctttttct 39194924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 47029516 - 47029437
Alignment:
Q  161 gagagtagatagtagaaataac--gcctggtagtcccacatcgctccaaagaaacatttcatacatcaacatgtattata 238  Q
    |||| ||||||||||||||||   | || ||||||||||||||||  ||| ||||||| | ||||| |||||||||||||    
T  47029516 gagactagatagtagaaataaatagacttgtagtcccacatcgctgaaaacaaacattgcttacatgaacatgtattata 47029437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 48571125 - 48571081
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||| ||||||||||||||||   |||||||||||    
T  48571125 aaaaacacaagaatgggggttgaattgtgttgattttttcttctt 48571081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 2176 - 2220
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  2176 aaaaacacaagaagtggggttgaattgtgttttctttttcttctt 2220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 30422381 - 30422337
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  30422381 aaaaacacaagaagaggggttgaattgtgtttgctttttcttctt 30422337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 45539435 - 45539391
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  45539435 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 45539391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 9340567 - 9340607
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  9340567 aaaaacacaagaaggggggttgaattgtgttttctttttct 9340607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 40002385 - 40002425
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  40002385 aaaaacacaagaaggggggttgaattgtgttttctttttct 40002425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 40214022 - 40213982
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  40214022 aaaaacacaagaaggggggttgaattgtgttttctttttct 40213982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 16376279 - 16376236
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||  |||||||||||||| ||||||||||||||    
T  16376279 aaaaacacaagaaggggggttgaattgtggtttctttttcttct 16376236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 26735834 - 26735793
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  26735834 aaaaacacaagaagagggggttgaattgtgttttctttttct 26735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 1210651 - 1210607
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  1210651 aaaaacacaagaaggggggttgaattgtgttagctttttcttctt 1210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 6406961 - 6407005
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||| ||||||||||||||||   |||||||||||    
T  6406961 aaaaacacaagaatgggggttgaattgtgttggttttttcttctt 6407005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 7019274 - 7019234
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  7019274 aaaaacataagaaggggggttgaattgtgttttctttttct 7019234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 9768002 - 9767963
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  9768002 aaaaacacaagaag-ggggttgaattgtgttttctttttct 9767963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 13431569 - 13431525
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  13431569 aaaaacacaagaaggggggttgaattgtgttagctttttcttctt 13431525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 17287114 - 17287070
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  17287114 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 17287070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 18122083 - 18122039
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  18122083 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 18122039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 22212219 - 22212179
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  22212219 aaaaacataagaaggggggttgaattgtgttttctttttct 22212179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 3246393 - 3246349
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  3246393 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 3246349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 37395372 - 37395422
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttcttcatctc 312  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  37395372 aaaaacacaagaaggggggttgaattgtgtttactttttcttcttcttctc 37395422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 15439503 - 15439548
Alignment:
Q  262 aaaaacacaagaa-taggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||    
T  15439503 aaaaacacaagaaatgggggttgaattgtgttttctttttcttctt 15439548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13533186 - 13533226
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  13533186 aaaaacacaagaaggggggttgaattgtgttttctttttct 13533226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 17456631 - 17456671
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17456631 aaaaacacaagaaggggggttgaattgtgttttctttttct 17456671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 21702443 - 21702483
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  21702443 aaaaacacaagaaggggggttgaattgtgttttctttttct 21702483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 40033713 - 40033673
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  40033713 aaaaacacaagaaggggggttgaattgtgttttctttttct 40033673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 2157201 - 2157158
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||  | |||||||||||||||||||||||||||    
T  2157201 aaaaacacaagaagggaggttgaattgtgttttctttttcttct 2157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 6037369 - 6037408
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttc 301  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  6037369 aaaaacacaagaaaaggggttgaattgtgttttatttttc 6037408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 31834426 - 31834385
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  31834426 aaaaacacaagaatggggggttgaattgtgttttctttttct 31834385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 17446015 - 17446055
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  17446015 aaaaacacaagaagggaggttgaattgtgttttctttttct 17446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 303
Target Start/End: Complemental strand, 23407578 - 23407538
Alignment:
Q  263 aaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||| |||||||||||||| |||||||| ||||    
T  23407578 aaaacacaagaagaggggttgaattgtattttctttgtctt 23407538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 23477581 - 23477621
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  23477581 aaaaacacaagaaggggggttgaattgtgttttcttgttct 23477621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 32753266 - 32753306
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  32753266 aaaaacataagaaggggggttgaattgtgttttctttttct 32753306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 34637730 - 34637758
Alignment:
Q  277 ggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||||||||||||||||||    
T  34637730 ggggttgaattgtgttttctttttcttct 34637758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 49002806 - 49002766
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  49002806 aaaaacacaagaatgggggttgaattgtgttttctttttct 49002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 54679064 - 54679108
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  54679064 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 54679108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 22190048 - 22190089
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    ||||||| ||||| ||||||||||||||||||||||||||||    
T  22190048 aaaaacataagaagaggggttgaattgtgttttctttttctt 22190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 4947772 - 4947812
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  4947772 aaaaacacaagaaggggggttgaattgtgttttctttttct 4947812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 11514469 - 11514509
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  11514469 aaaaacacaagaaggggggttgaattgtgttttctttttct 11514509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 14836929 - 14836889
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  14836929 aaaaacacaagaaggggggttgaattgtgttttctttttct 14836889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 18078733 - 18078693
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  18078733 aaaaacacaagaaggggggttgaattgtgttttctttttct 18078693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 19570450 - 19570490
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19570450 aaaaacacaagaaggggggttgaattgtgttttctttttct 19570490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 25656565 - 25656605
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  25656565 aaaaacacaagaaggggggttgaattgtgttttctttttct 25656605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 31267617 - 31267577
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  31267617 aaaaacacaagaaggggggttgaattgtgttttctttttct 31267577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 33377573 - 33377613
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  33377573 aaaaacacaagaaggggggttgaattgtgttttctttttct 33377613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 15560473 - 15560514
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  15560473 aaaaacacaagaaggggggttgaattgtgtttgctttttctt 15560514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 55650756 - 55650797
Alignment:
Q  262 aaaaacacaagaat-aggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  55650756 aaaaacacaagaaggaggggttgaattgtgttttctttttct 55650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 298
Target Start/End: Original strand, 5872806 - 5872842
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttcttt 298  Q
    |||||||||||||  ||||||||||||||||||||||    
T  5872806 aaaaacacaagaaggggggttgaattgtgttttcttt 5872842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 17199317 - 17199277
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||| ||||||    
T  17199317 aaaaacacaagaaggggggttgaattgtgttttcattttct 17199277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 40859910 - 40859954
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  40859910 aaaaacacaagaaggggggttgaattgtgttagctttttcttctt 40859954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 24450346 - 24450302
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  24450346 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 24450302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 28702119 - 28702075
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  28702119 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 28702075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 45087892 - 45087848
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||||||||    
T  45087892 aaaaacacaagaaggggggttgaattgtgttttctttttcttctt 45087848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 1041538 - 1041578
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  1041538 aaaaacacaagaaggggggttgaattgtgttttctttttct 1041578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 28732743 - 28732703
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  28732743 aaaaacacaagaaggggggttgaattgtgttttctttttct 28732703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 29243611 - 29243651
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  29243611 aaaaacacaagaaggggggttgaattgtgttttctttttct 29243651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 9774142 - 9774101
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  9774142 aaaaacacaagaagagggggttgaattgtgttttctttttct 9774101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 20319552 - 20319511
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  20319552 aaaaacacaagaagagggggttgaattgtgttttctttttct 20319511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 22773744 - 22773785
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  22773744 aaaaacacaagaagagggggttgaattgtgttttctttttct 22773785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 20567451 - 20567479
Alignment:
Q  277 ggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||||||||||||||||||    
T  20567451 ggggttgaattgtgttttctttttcttct 20567479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 22782526 - 22782482
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  22782526 aaaaacacaagaaggggggttgaattgtgttagctttttcttctt 22782482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 28551815 - 28551771
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  28551815 aaaaacacaagaaggggggttgaattgtgttagctttttcttctt 28551771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 31328868 - 31328824
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  |||||||||||||||||  |||||||||||    
T  31328868 aaaaacacaagaaggggggttgaattgtgtttgttttttcttctt 31328824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 31335589 - 31335545
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  |||||||||||||||||  |||||||||||    
T  31335589 aaaaacacaagaaggggggttgaattgtgtttgttttttcttctt 31335545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 38040841 - 38040801
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  38040841 aaaaacacaagagggggggttgaattgtgttttctttttct 38040801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 21839 - 21797
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  21839 aaaaacacaagaaggggggttgaattgtgttttctttttcttc 21797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 13259396 - 13259354
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  13259396 aaaaacacaagaaggggggttgaattgtgttttctttttcttc 13259354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 13261628 - 13261586
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  13261628 aaaaacacaagaaggggggttgaattgtgttttctttttcttc 13261586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 1559996 - 1559955
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  1559996 aaaaacacaagaaggggggttgaattgtgttttctttttctt 1559955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 4433493 - 4433453
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  4433493 aaaaacacaagaaggggggttgaattgtgttttctttttct 4433453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 6045183 - 6045143
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  6045183 aaaaacacaagaaggggggttgaattgtgttttctttttct 6045143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 14746572 - 14746532
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  14746572 aaaaacacaagaaggggggttgaattgtgttttctttttct 14746532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 18440594 - 18440634
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  18440594 aaaaacacaagaaggggggttgaattgtgttttctttttct 18440634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 24883296 - 24883256
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  24883296 aaaaacacaagaaggggggttgaattgtgttttctttttct 24883256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 11792075 - 11792117
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    |||||||||||||  |||||||||||||||| |||||||||||    
T  11792075 aaaaacacaagaaggggggttgaattgtgttatctttttcttc 11792117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Complemental strand, 16557563 - 16557513
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttcttcatctc 312  Q
    |||||||||||||  ||||||||||||||||  |||||||||||| |||||    
T  16557563 aaaaacacaagaaggggggttgaattgtgttggctttttcttctttatctc 16557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 312
Target Start/End: Original strand, 16608099 - 16608149
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttcttcatctc 312  Q
    |||||||||||||  ||||||||||||||||  |||||||||||| |||||    
T  16608099 aaaaacacaagaaggggggttgaattgtgttggctttttcttctttatctc 16608149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Complemental strand, 19238012 - 19237970
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    ||||||| |||||  ||||||||||||||||||||||||||||    
T  19238012 aaaaacaaaagaaggggggttgaattgtgttttctttttcttc 19237970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 1251807 - 1251766
Alignment:
Q  262 aaaaacacaagaat-aggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  1251807 aaaaacacaagaaggaggggttgaattgtgttttctttttct 1251766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 48806836 - 48806795
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||  |||||||||||||||| ||||||||||    
T  48806836 aaaaacacaagaaggggggttgaattgtgttatctttttctt 48806795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 8932964 - 8933003
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  8932964 aaaaacacaagaag-ggggttgaattgtgttttctttttct 8933003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 15705446 - 15705402
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  15705446 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 15705402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 21284327 - 21284287
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||| ||||||||    
T  21284327 aaaaacacaagaaggggggttgaattgtgtttactttttct 21284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 302
Target Start/End: Complemental strand, 38594578 - 38594542
Alignment:
Q  266 acacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||  ||||||||||||||||||||||||||    
T  38594578 acacaagaaggggggttgaattgtgttttctttttct 38594542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000005; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 2025303 - 2025344
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  2025303 aaaaacacaagaaggggggttgaattgtgttttctttttctt 2025344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 4433174 - 4433214
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  4433174 aaaaacacaagaaggggggttgaattgtgttttctttttct 4433214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13601647 - 13601687
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  13601647 aaaaacacaagaaggggggttgaattgtgttttctttttct 13601687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 16031710 - 16031754
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||| || |||||||||||| |||||||||||||||    
T  16031710 aaaaacacaagaagagaggttgaattgtgatttctttttcttctt 16031754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 17910827 - 17910787
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17910827 aaaaacacaagaaggggggttgaattgtgttttctttttct 17910787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 17960815 - 17960855
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  17960815 aaaaacacaagaaggggggttgaattgtgttttctttttct 17960855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 19888175 - 19888135
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19888175 aaaaacacaagaaggggggttgaattgtgttttctttttct 19888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 21735586 - 21735626
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  21735586 aaaaacacaagaaggggggttgaattgtgttttctttttct 21735626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 22150414 - 22150454
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  22150414 aaaaacacaagaaggggggttgaattgtgttttctttttct 22150454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 24707379 - 24707339
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  24707379 aaaaacacaagaaggggggttgaattgtgttttctttttct 24707339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 27849436 - 27849480
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||    
T  27849436 aaaaacacaagaataggggttgaattgtattagctttttcttctt 27849480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 28165390 - 28165430
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  28165390 aaaaacacaagaaggggggttgaattgtgttttctttttct 28165430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 28581302 - 28581346
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||    
T  28581302 aaaaacacaagaatgggggttgaattgtgttagctttttcttctt 28581346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 304
Target Start/End: Original strand, 2560392 - 2560434
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttc 304  Q
    |||||||||||||  ||||||||||||||||| ||||||||||    
T  2560392 aaaaacacaagaaggggggttgaattgtgtttactttttcttc 2560434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 29462038 - 29461997
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  29462038 aaaaacacaagaagagggggttgaattgtgttttctttttct 29461997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 40799112 - 40799141
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  40799112 ggggttgaattgtgttttctttttcttctt 40799141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 51340181 - 51340222
Alignment:
Q  262 aaaaacacaagaat-aggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||||||||||||||||||||||||||    
T  51340181 aaaaacacaagaaggaggggttgaattgtgttttctttttct 51340222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 4403687 - 4403727
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||| ||||||||||||||||    
T  4403687 aaaaacacaagaaggggggttgaactgtgttttctttttct 4403727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 9994714 - 9994674
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  9994714 aaaaacataagaaggggggttgaattgtgttttctttttct 9994674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 14954617 - 14954661
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  14954617 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 14954661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 15663559 - 15663523
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttcttt 298  Q
    |||||||||||||  ||||||||||||||||||||||    
T  15663559 aaaaacacaagaaggggggttgaattgtgttttcttt 15663523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 15848310 - 15848350
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  15848310 aaaaacacaagaaatggtgttgaattgtgttttctttttct 15848350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 16076342 - 16076382
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  16076342 aaaaacacaagaaggggggttgaattgtgttttcttgttct 16076382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 17282254 - 17282214
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||| |||||||||||||||||||||    
T  17282254 aaaaacacaagaagggggggtgaattgtgttttctttttct 17282214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 21639231 - 21639187
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  21639231 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 21639187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 41044910 - 41044950
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  41044910 aaaaacacaagagggggggttgaattgtgttttctttttct 41044950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 45862551 - 45862511
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  45862551 aaaaacgcaagaaggggggttgaattgtgttttctttttct 45862511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 3081 - 3041
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  3081 aaaaacacaagaaggggggttgaattgtgttttctttttct 3041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 7218 - 7178
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  7218 aaaaacacaagaaggggggttgaattgtgttttctttttct 7178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 11467 - 11427
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  11467 aaaaacacaagaaggggggttgaattgtgttttctttttct 11427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 33763 - 33723
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  33763 aaaaacacaagaaggggggttgaattgtgttttctttttct 33723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 52596 - 52556
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  52596 aaaaacacaagaaggggggttgaattgtgttttctttttct 52556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13975 - 14015
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  13975 aaaaacacaagaaggggggttgaattgtgttttctttttct 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 12352942 - 12352982
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  12352942 aaaaacacaagaaggggggttgaattgtgttttctttttct 12352982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 16124366 - 16124326
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  16124366 aaaaacacaagaaggggggttgaattgtgttttctttttct 16124326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 19453500 - 19453460
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  19453500 aaaaacacaagaaggggggttgaattgtgttttctttttct 19453460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 19833932 - 19833888
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||    
T  19833932 aaaaacacaagaaggggggttgaattgtgttttctttttcatctt 19833888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 28252396 - 28252356
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  28252396 aaaaacacaagaaggggggttgaattgtgttttctttttct 28252356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 32756766 - 32756806
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  32756766 aaaaacacaagaaggggggttgaattgtgttttctttttct 32756806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 33866508 - 33866548
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  33866508 aaaaacacaagaaggggggttgaattgtgttttctttttct 33866548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 12041063 - 12041108
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttcttc 307  Q
    ||||||||||||| || ||||||||||||||  |||||||||||||    
T  12041063 aaaaacacaagaagagtggttgaattgtgttgactttttcttcttc 12041108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 20634889 - 20634930
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    |||||||||||||| |||| ||||||||||||||||||||||    
T  20634889 aaaaacacaagaatggggggttgaattgtgttttctttttct 20634930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 26588804 - 26588845
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||| ||||||||||||||||  |||||||||    
T  26588804 aaaaacacaagaatgggggttgaattgtgttagctttttctt 26588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 33353175 - 33353146
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  33353175 ggggttgaattgtgttttctttttcttctt 33353146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 7752071 - 7752031
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||| ||||    
T  7752071 aaaaacacaagaaggggggttgaattgtgttttcttcttct 7752031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 16332935 - 16332979
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  16332935 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 16332979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 22385973 - 22386013
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  |||||||||||| |||||||||||||    
T  22385973 aaaaacacaagaaggggggttgaattgagttttctttttct 22386013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 24471308 - 24471264
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||| || ||||||||||||||  ||||||||||||    
T  24471308 aaaaacacaagaagagtggttgaattgtgttaactttttcttctt 24471264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 31930812 - 31930852
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  | ||||||||||||||||||||||||    
T  31930812 aaaaacacaagaagggaggttgaattgtgttttctttttct 31930852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 1873 - 1916
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||  |||||||||||||| ||||||||||||||    
T  1873 aaaaacacaagaaggggggttgaattgtggtttctttttcttct 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 87574 - 87617
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttct 305  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||    
T  87574 aaaaacacaagaagatgggttgaattgtggtttctttttcttct 87617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 476195 - 476156
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttc 301  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  476195 aaaaacacaagaaggggggttgaattgtgttttctttttc 476156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 482715 - 482676
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttc 301  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  482715 aaaaacacaagaaggggggttgaattgtgttttctttttc 482676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0752 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0752
Description:

Target: scaffold0752; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 624 - 661
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttt 299  Q
    |||||||||||||  |||||||||||||||||||||||    
T  624 aaaaacacaagaaggggggttgaattgtgttttctttt 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 12228 - 12269
Alignment:
Q  262 aaaaacacaagaa-taggggttgaattgtgttttctttttct 302  Q
    ||||||||||||| | ||||||||||||||||||||||||||    
T  12228 aaaaacacaagaagtgggggttgaattgtgttttctttttct 12269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 6613 - 6584
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  6613 ggggttgaattgtgttttctttttcttctt 6584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 10150 - 10191
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  10150 aaaaacacaagaagagggggttgaattgtgttttctttttct 10191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Complemental strand, 3571 - 3542
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  3571 ggggttgaattgtgttttctttttcttctt 3542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 306
Target Start/End: Original strand, 18257 - 18286
Alignment:
Q  277 ggggttgaattgtgttttctttttcttctt 306  Q
    ||||||||||||||||||||||||||||||    
T  18257 ggggttgaattgtgttttctttttcttctt 18286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Original strand, 2404 - 2445
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  2404 aaaaacacaagaaggggggttgaattgtgtttgctttttctt 2445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 57646 - 57605
Alignment:
Q  262 aaaaacacaagaatagggg-ttgaattgtgttttctttttct 302  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  57646 aaaaacacaagaagagggggttgaattgtgttttctttttct 57605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 1568 - 1608
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  1568 aaaaacacaagagggggggttgaattgtgttttctttttct 1608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 5663 - 5623
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||||||||   ||||||||||||||||||||||||||    
T  5663 aaaaacacaagagggggggttgaattgtgttttctttttct 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 133 - 173
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  133 aaaaacagaagaaggggggttgaattgtgttttctttttct 173  T

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Target: scaffold0525 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 7064 - 7103
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  7064 aaaaacacaagaag-ggggttgaattgtgttttctttttct 7103  T

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Target: scaffold0439 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 7612 - 7568
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  7612 aaaaacacaagaaggggggttgaattgtgttggctttttcttctt 7568  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 305
Target Start/End: Original strand, 18427 - 18455
Alignment:
Q  277 ggggttgaattgtgttttctttttcttct 305  Q
    |||||||||||||||||||||||||||||    
T  18427 ggggttgaattgtgttttctttttcttct 18455  T

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Target: scaffold0154 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 303
Target Start/End: Original strand, 34931 - 34971
Alignment:
Q  263 aaaacacaagaataggggttgaattgtgttttctttttctt 303  Q
    |||||| |||||  |||||||||||||||||||||||||||    
T  34931 aaaacataagaaagggggttgaattgtgttttctttttctt 34971  T

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Target: scaffold0073 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 57757 - 57797
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttct 302  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  57757 aaaaacagaagaaggggggttgaattgtgttttctttttct 57797  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Complemental strand, 88503 - 88459
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  ||||||||||||||||  ||||||||||||    
T  88503 aaaaacacaagaaggggggttgaattgtgttaactttttcttctt 88459  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 63542 - 63586
Alignment:
Q  262 aaaaacacaagaataggggttgaattgtgttttctttttcttctt 306  Q
    |||||||||||||  |||||||||||||||||  |||||||||||    
T  63542 aaaaacacaagaaggggggttgaattgtgtttgttttttcttctt 63586  T

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