View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6322_high_3 (Length: 372)

Name: NF6322_high_3
Description: NF6322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6322_high_3
NF6322_high_3
[»] chr7 (29 HSPs)
chr7 (29-354)||(13905701-13906026)
chr7 (1-83)||(7392284-7392366)
chr7 (1-69)||(43635637-43635705)
chr7 (36-83)||(25818321-25818368)
chr7 (3-69)||(10958082-10958148)
chr7 (1-83)||(35195878-35195960)
chr7 (29-66)||(9351086-9351123)
chr7 (33-69)||(8725148-8725184)
chr7 (33-69)||(30152790-30152826)
chr7 (1-53)||(32309126-32309178)
chr7 (1-65)||(41000813-41000877)
chr7 (1-83)||(5787496-5787576)
chr7 (1-83)||(29658252-29658332)
chr7 (6-68)||(33555119-33555179)
chr7 (33-83)||(7908744-7908794)
chr7 (1-83)||(10020447-10020529)
chr7 (33-83)||(21285363-21285413)
chr7 (1-69)||(11808087-11808156)
chr7 (34-83)||(14707327-14707376)
chr7 (5-65)||(26958107-26958165)
chr7 (30-83)||(31475847-31475900)
chr7 (43-83)||(13720808-13720848)
chr7 (17-69)||(16814746-16814798)
chr7 (1-68)||(17997718-17997783)
chr7 (43-83)||(21576897-21576937)
chr7 (17-53)||(28555845-28555881)
chr7 (43-83)||(32074387-32074427)
chr7 (4-83)||(42887189-42887266)
chr7 (5-69)||(48007071-48007135)
[»] chr6 (27 HSPs)
chr6 (1-66)||(30668162-30668227)
chr6 (4-83)||(10377107-10377184)
chr6 (1-68)||(34675784-34675851)
chr6 (1-83)||(2235337-2235419)
chr6 (29-83)||(8176031-8176085)
chr6 (1-71)||(26669637-26669707)
chr6 (17-66)||(7374044-7374093)
chr6 (33-69)||(20568267-20568303)
chr6 (4-66)||(35190815-35190875)
chr6 (29-83)||(1488123-1488177)
chr6 (33-83)||(19165386-19165435)
chr6 (9-67)||(24256967-24257025)
chr6 (16-70)||(29430296-29430350)
chr6 (30-83)||(6658550-6658603)
chr6 (30-71)||(33628948-33628989)
chr6 (43-83)||(9435664-9435704)
chr6 (33-69)||(9491745-9491781)
chr6 (1-65)||(10443166-10443230)
chr6 (40-68)||(13094510-13094538)
chr6 (43-83)||(13158701-13158741)
chr6 (43-83)||(13163557-13163597)
chr6 (4-68)||(17347304-17347368)
chr6 (43-83)||(19374832-19374872)
chr6 (29-69)||(29204875-29204915)
chr6 (1-81)||(32394062-32394141)
chr6 (33-69)||(34365784-34365820)
chr6 (35-83)||(34524910-34524958)
[»] chr5 (38 HSPs)
chr5 (4-70)||(31004111-31004177)
chr5 (2-83)||(40384286-40384367)
chr5 (1-83)||(27095514-27095596)
chr5 (33-83)||(32158424-32158474)
chr5 (4-69)||(3535917-3535982)
chr5 (32-69)||(18872570-18872607)
chr5 (4-108)||(22687862-22687969)
chr5 (33-70)||(28378075-28378112)
chr5 (4-83)||(10943751-10943828)
chr5 (30-70)||(18303085-18303125)
chr5 (29-69)||(24397936-24397976)
chr5 (1-69)||(28537184-28537252)
chr5 (33-69)||(29331292-29331328)
chr5 (43-83)||(41477350-41477390)
chr5 (17-69)||(42553135-42553187)
chr5 (2-69)||(19608662-19608728)
chr5 (34-69)||(20191490-20191525)
chr5 (4-70)||(20762329-20762393)
chr5 (4-69)||(843351-843414)
chr5 (1-71)||(20220138-20220208)
chr5 (1-67)||(31280358-31280423)
chr5 (33-83)||(42455404-42455454)
chr5 (30-83)||(1463906-1463959)
chr5 (5-66)||(11736928-11736989)
chr5 (37-66)||(12262990-12263019)
chr5 (4-69)||(17137848-17137913)
chr5 (16-69)||(27006389-27006442)
chr5 (33-70)||(31200837-31200874)
chr5 (9-66)||(31556870-31556927)
chr5 (33-65)||(2029138-2029170)
chr5 (29-69)||(5932030-5932069)
chr5 (33-69)||(8015884-8015920)
chr5 (1-69)||(8934830-8934898)
chr5 (1-69)||(22396967-22397034)
chr5 (1-53)||(36480243-36480295)
chr5 (29-69)||(38129019-38129059)
chr5 (33-69)||(38618691-38618727)
chr5 (35-83)||(42595776-42595824)
[»] chr4 (39 HSPs)
chr4 (2-83)||(49039424-49039505)
chr4 (1-83)||(54854157-54854239)
chr4 (4-83)||(20610774-20610853)
chr4 (29-83)||(7768794-7768848)
chr4 (29-83)||(21752833-21752887)
chr4 (33-83)||(36008310-36008360)
chr4 (29-83)||(37997852-37997906)
chr4 (1-66)||(12585537-12585602)
chr4 (2-65)||(31480324-31480385)
chr4 (1-56)||(37914669-37914722)
chr4 (1-83)||(9285639-9285719)
chr4 (34-69)||(9924905-9924940)
chr4 (4-83)||(18497427-18497506)
chr4 (1-83)||(30203288-30203371)
chr4 (3-69)||(36257743-36257807)
chr4 (33-83)||(6637732-6637782)
chr4 (1-83)||(15507581-15507663)
chr4 (29-71)||(29785197-29785239)
chr4 (33-83)||(47017956-47018006)
chr4 (37-83)||(53815731-53815777)
chr4 (10-83)||(6481571-6481644)
chr4 (30-83)||(9692997-9693050)
chr4 (30-83)||(14149828-14149881)
chr4 (1-70)||(23226683-23226752)
chr4 (16-69)||(24039933-24039986)
chr4 (30-83)||(28520738-28520791)
chr4 (9-69)||(30616049-30616107)
chr4 (2-67)||(33359868-33359933)
chr4 (30-83)||(48501665-48501718)
chr4 (30-83)||(48968217-48968270)
chr4 (29-66)||(51640459-51640496)
chr4 (33-65)||(1297906-1297938)
chr4 (4-83)||(3465618-3465695)
chr4 (38-70)||(23449021-23449053)
chr4 (29-69)||(33076579-33076619)
chr4 (29-65)||(40051307-40051343)
chr4 (1-69)||(42411433-42411500)
chr4 (13-69)||(48542171-48542227)
chr4 (29-69)||(52556681-52556721)
[»] chr8 (29 HSPs)
chr8 (29-69)||(4604359-4604399)
chr8 (33-83)||(10970301-10970351)
chr8 (17-83)||(26773696-26773762)
chr8 (33-69)||(8034579-8034615)
chr8 (2-66)||(22438563-22438627)
chr8 (1-68)||(220340-220407)
chr8 (1-68)||(689495-689562)
chr8 (1-68)||(733963-734030)
chr8 (1-68)||(857859-857926)
chr8 (5-83)||(6978855-6978931)
chr8 (2-69)||(12926457-12926524)
chr8 (33-83)||(5184897-5184947)
chr8 (33-71)||(7649575-7649613)
chr8 (33-83)||(10199752-10199802)
chr8 (4-69)||(14683925-14683988)
chr8 (33-83)||(15042375-15042425)
chr8 (33-83)||(30942609-30942659)
chr8 (37-83)||(33524431-33524477)
chr8 (17-83)||(37989035-37989101)
chr8 (30-83)||(2696568-2696621)
chr8 (30-83)||(2800054-2800107)
chr8 (34-83)||(4798552-4798601)
chr8 (29-70)||(18030703-18030744)
chr8 (43-83)||(10573139-10573179)
chr8 (33-69)||(14010782-14010818)
chr8 (28-68)||(17467327-17467367)
chr8 (29-69)||(19925105-19925145)
chr8 (9-65)||(28979079-28979135)
chr8 (33-69)||(30542813-30542849)
[»] chr3 (44 HSPs)
chr3 (4-83)||(21248971-21249050)
chr3 (17-68)||(28951916-28951967)
chr3 (33-83)||(33206792-33206842)
chr3 (4-69)||(36331709-36331772)
chr3 (1-71)||(40160782-40160852)
chr3 (33-83)||(47191408-47191458)
chr3 (30-83)||(14868720-14868773)
chr3 (30-71)||(31419630-31419671)
chr3 (16-69)||(32080104-32080157)
chr3 (1-69)||(24160506-24160574)
chr3 (5-69)||(31902188-31902251)
chr3 (33-69)||(32508804-32508840)
chr3 (33-69)||(50144616-50144652)
chr3 (34-70)||(50676878-50676914)
chr3 (4-83)||(50724402-50724479)
chr3 (4-83)||(50788369-50788446)
chr3 (4-83)||(27119311-27119390)
chr3 (34-81)||(37756424-37756471)
chr3 (34-69)||(49639077-49639112)
chr3 (4-69)||(3955357-3955420)
chr3 (1-67)||(8724823-8724888)
chr3 (1-67)||(9076710-9076775)
chr3 (33-83)||(14417903-14417953)
chr3 (2-68)||(16985070-16985136)
chr3 (1-70)||(18399632-18399699)
chr3 (17-83)||(22432905-22432971)
chr3 (33-83)||(24537862-24537912)
chr3 (4-69)||(35483318-35483381)
chr3 (33-83)||(46328934-46328984)
chr3 (1-71)||(49299218-49299287)
chr3 (4-69)||(4478349-4478414)
chr3 (30-83)||(9625018-9625071)
chr3 (4-69)||(10959182-10959245)
chr3 (1-82)||(17262255-17262336)
chr3 (30-83)||(27183688-27183741)
chr3 (34-83)||(27394542-27394591)
chr3 (30-83)||(28226194-28226247)
chr3 (30-83)||(36476394-36476447)
chr3 (33-69)||(2732712-2732748)
chr3 (1-69)||(24130608-24130676)
chr3 (13-69)||(38507695-38507751)
chr3 (2-66)||(42665904-42665968)
chr3 (33-69)||(42832072-42832108)
chr3 (43-83)||(49028935-49028975)
[»] chr2 (30 HSPs)
chr2 (1-63)||(35352382-35352444)
chr2 (4-85)||(1244602-1244683)
chr2 (45-106)||(9937514-9937575)
chr2 (2-70)||(37516038-37516106)
chr2 (1-48)||(30737051-30737098)
chr2 (1-67)||(34107325-34107391)
chr2 (29-66)||(9520860-9520897)
chr2 (4-69)||(12206547-12206612)
chr2 (10-67)||(14307681-14307738)
chr2 (1-66)||(20942087-20942152)
chr2 (29-85)||(26975305-26975360)
chr2 (4-83)||(32943374-32943451)
chr2 (1-71)||(32988397-32988465)
chr2 (34-81)||(43684315-43684362)
chr2 (33-83)||(580793-580843)
chr2 (33-83)||(3037632-3037682)
chr2 (33-83)||(17154684-17154734)
chr2 (29-71)||(20451862-20451904)
chr2 (1-67)||(33124343-33124409)
chr2 (4-66)||(39118445-39118507)
chr2 (33-66)||(14269891-14269924)
chr2 (30-83)||(29035011-29035064)
chr2 (33-82)||(34018080-34018129)
chr2 (36-69)||(41699151-41699184)
chr2 (33-69)||(8234802-8234838)
chr2 (33-69)||(11133125-11133161)
chr2 (2-54)||(17896882-17896934)
chr2 (4-83)||(22297435-22297512)
chr2 (43-71)||(22718053-22718081)
chr2 (29-69)||(23405248-23405288)
[»] chr1 (44 HSPs)
chr1 (1-70)||(23973460-23973529)
chr1 (34-81)||(2350386-2350433)
chr1 (1-67)||(23758230-23758297)
chr1 (4-83)||(50199457-50199536)
chr1 (29-83)||(2903033-2903087)
chr1 (9-83)||(7906312-7906386)
chr1 (10-68)||(26349966-26350024)
chr1 (8-53)||(3046154-3046199)
chr1 (1-108)||(33844630-33844734)
chr1 (1-108)||(33949244-33949348)
chr1 (3-70)||(11802002-11802067)
chr1 (29-108)||(28056991-28057071)
chr1 (31-83)||(42946475-42946527)
chr1 (43-83)||(47642974-47643014)
chr1 (32-83)||(32635175-32635226)
chr1 (9-83)||(42831982-42832054)
chr1 (33-83)||(538339-538389)
chr1 (29-83)||(1660978-1661032)
chr1 (9-83)||(3341722-3341796)
chr1 (1-71)||(9931134-9931204)
chr1 (34-68)||(35195622-35195656)
chr1 (35-69)||(41833547-41833581)
chr1 (1-83)||(43020646-43020728)
chr1 (16-66)||(48260182-48260232)
chr1 (33-66)||(1031639-1031672)
chr1 (4-69)||(2643796-2643861)
chr1 (16-69)||(9768802-9768855)
chr1 (29-70)||(9769586-9769627)
chr1 (4-69)||(12553243-12553308)
chr1 (30-83)||(17350096-17350149)
chr1 (30-71)||(25421901-25421942)
chr1 (4-69)||(41677109-41677174)
chr1 (33-82)||(46116184-46116233)
chr1 (43-83)||(7166219-7166259)
chr1 (33-69)||(11405505-11405541)
chr1 (33-69)||(15774322-15774358)
chr1 (35-83)||(18003851-18003899)
chr1 (1-53)||(19866540-19866592)
chr1 (29-69)||(22779272-22779312)
chr1 (29-69)||(24168585-24168625)
chr1 (4-67)||(34560321-34560382)
chr1 (43-83)||(35283539-35283579)
chr1 (33-69)||(37733804-37733840)
chr1 (43-83)||(47088847-47088887)
[»] scaffold0119 (1 HSPs)
scaffold0119 (1-71)||(1086-1156)
[»] scaffold0112 (1 HSPs)
scaffold0112 (30-83)||(17938-17991)
[»] scaffold0009 (1 HSPs)
scaffold0009 (4-83)||(108344-108421)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-69)||(4372-4435)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-66)||(166648-166707)
[»] scaffold0008 (1 HSPs)
scaffold0008 (33-71)||(43707-43745)
[»] scaffold0343 (1 HSPs)
scaffold0343 (33-70)||(8608-8645)
[»] scaffold0036 (1 HSPs)
scaffold0036 (38-83)||(25061-25106)
[»] scaffold0002 (1 HSPs)
scaffold0002 (4-69)||(440448-440513)
[»] scaffold0533 (1 HSPs)
scaffold0533 (33-69)||(9375-9411)
[»] scaffold0039 (1 HSPs)
scaffold0039 (4-83)||(101866-101943)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 29 - 354
Target Start/End: Complemental strand, 13906026 - 13905701
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatatagccaactgagctatgctcacggggatatcttatgatactattatt 128  Q
    ||||||| || ||||||||| |||||||| ||||||||  ||  | ||||||||| |||||||||||||||||||||| | |||||| ||||||||||||    
T  13906026 tttttaaagtaaataagtggggtgttcggagttcgaacatcaacccctgcatataaccaactgagctatgctcacgggaacatcttacgatactattatt 13905927  T
Q  129 aatgattgcagatgcatcctatccacatatatgtgaatccttgtgtcaagtttattaagagacaagtaaacccggatgcctataatcttcttagagtggc 228  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||||||| ||||||||||    
T  13905926 aatgattggagatgcatcctatccacatatatgtgaatccttgtgtcaaatttattaagagacaagtcaaccaggatgcccataatcttgttagagtggc 13905827  T
Q  229 tccatctttttatttgcatacatatccacataattattatgaatgaaatgaattaagttttttgccgtaaaaattaattaaattgaagtattcataaatt 328  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||    
T  13905826 tccatctttttatttgcatacatatccaaataattattatgaatgaaatgaattaagttttttgtcgtaaaaattaattaaattgaaatatttataaatt 13905727  T
Q  329 tatgatttaaattcccaaaatgtttt 354  Q
    ||||||||||||||||||||||||||    
T  13905726 tatgatttaaattcccaaaatgtttt 13905701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7392284 - 7392366
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||| ||||| ||| |||| | | |||| ||||||||||||||| ||||||||||||| |||||||  |||||||||||    
T  7392284 caagtagtttagtggctataattcatatttttcaaggtgaataagtggggtgttcggggttcaaaccccaacctctgcatata 7392366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 43635705 - 43635637
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||| ||||| |||||||| ||  ||| |||||||||||||||| |||| |||||||||||||||    
T  43635705 caagtagtttagtggctagaattcaccctttgtaaggtgaataagtggggtgtccggggttcgaacccc 43635637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 25818368 - 25818321
Alignment:
Q  36 ggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||||||| |||| | |||||||||    
T  25818368 ggtgaataagtggagtgttcggggttcgaactccagcccctgcatata 25818321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 10958148 - 10958082
Alignment:
Q  3 agtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||| |||||| |||||||| ||  ||||| |||||||||||||| |||| |||||||||||||||    
T  10958148 agtagcctagtggctagaattcaccttttttgaggtgaataagtggggtgtccggggttcgaacccc 10958082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35195960 - 35195878
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| | |||||||||||| | ||  |||| ||||||||||| ||| |||||||||||||||||||| | | |||||||||    
T  35195960 caagtaatttagtgactagaagtcacctttttcaaggtgaataaatggggtgttcggggttcgaaccccggcccctgcatata 35195878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 9351123 - 9351086
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9351123 tttttaaggtgaataagtggagttttcggggttcgaac 9351086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 8725148 - 8725184
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8725148 taaggtgaataagtggggtgttcggggttcgaacccc 8725184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 30152826 - 30152790
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30152826 taaggtgaataagtggggtgttcggggttcgaacccc 30152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32309126 - 32309178
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgt 53  Q
    |||||||||||||| |||||||| ||| |||||||||||||||| ||| ||||    
T  32309126 caagtagtctagtggctagaattcacattttttaaggtgaataactggggtgt 32309178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41000877 - 41000813
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    |||||||||| |||  ||||||| ||| ||||||||||||||||||||  |||||||| ||||||    
T  41000877 caagtagtctggtggttagaattcacattttttaaggtgaataagtgggatgttcgggattcgaa 41000813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5787576 - 5787496
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| ||||||||||||||| ||   || |||||||||||||||| ||||| ||||||| |||||| | | |||||||||    
T  5787576 caagtagcctagtgactagaattcacc--ttataaggtgaataagtggggtgtttggggttcaaaccccggcccctgcatata 5787496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29658252 - 29658332
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| |||||| |||||||| ||   || |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  29658252 caagtagcctagtggctagaattcacc--ttataaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 29658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 33555179 - 33555119
Alignment:
Q  6 agtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||| ||||||||  ||| || |||| |||||||||||||||| ||||||||||||||    
T  33555179 agtctagtggctagaatt--cagcttataagatgaataagtggagtgtccggggttcgaaccc 33555119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 7908794 - 7908744
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| | ||||| |||||||||||| ||| |||||||||||    
T  7908794 taaggtgaataagtagggtgtttggggttcgaacctcagcctctgcatata 7908744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10020447 - 10020529
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| ||||||  ||||||| ||  |||| ||| |||||||||||  ||||||||||||||||||||  | |||||||||    
T  10020447 caagtaggctagtgggtagaattcacctttttcaagatgaataagtgggttgttcggggttcgaaccccaacccctgcatata 10020529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 21285363 - 21285413
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  21285363 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 21285413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 11808156 - 11808087
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttt-taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||   ||||||| ||  |||| |||||||||||||||| |||| |||||||||||||||    
T  11808156 caagtagtctagttgttagaattcacgtttttctaaggtgaataagtggggtgtccggggttcgaacccc 11808087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 14707376 - 14707327
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||| |||| ||||||||||||||||  | |||||||||    
T  14707376 aaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata 14707327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 26958107 - 26958165
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    |||||||||||||| ||||  || ||||||| ||||||||||||||||||  |||||||||    
T  26958107 tagtctagtgactataatt--caatttttaaagtgaataagtggagtgttgagggttcgaa 26958165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 31475847 - 31475900
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| ||||  |||||||||||||||| | |||||||||    
T  31475847 ttttaaagtgaataagtggggtgtcaggggttcgaaccccagcccctgcatata 31475900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 13720848 - 13720808
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  13720848 aagtggagtgttcggggttcgaaccccggcccctgcatata 13720808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 16814798 - 16814746
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||| ||| |||| || |||||||||||||||||  ||||||||||||||    
T  16814798 tagaattcacatttttcaaagtgaataagtggagtgtctggggttcgaacccc 16814746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 17997718 - 17997783
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    |||||||||||||| |||||||| ||   ||||||||||||||| ||| |||| | ||||||||||||    
T  17997718 caagtagtctagtggctagaattcacc--ttttaaggtgaataaatggggtgtccagggttcgaaccc 17997783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 21576937 - 21576897
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  21576937 aagtggagtattcggggttcgaaccccaatctctgcatata 21576897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 28555845 - 28555881
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgt 53  Q
    ||||||||||  |||||||||||||||||||||||||    
T  28555845 tagaatttaccttttttaaggtgaataagtggagtgt 28555881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 32074387 - 32074427
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  32074387 aagtggagtgtccggggttcgaaccccagcccctgcatata 32074427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 42887266 - 42887189
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||||||| ||   || |||||| ||||||||| |||| ||||||||||||| ||| | |||||||||    
T  42887266 gtagtctagtggctagaattcacc--ttataaggtaaataagtggggtgtccggggttcgaacctcagcccctgcatata 42887189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 48007135 - 48007071
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||| |||||||| ||  ||| ||||||||| ||||||  |||||| ||||||||||||    
T  48007135 tagtctagtggctagaattcaccttttgtaaggtgaacaagtgggatgttcgaggttcgaacccc 48007071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30668162 - 30668227
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||| |||||||||    
T  30668162 caagtagtctagtgactataattcacattttttaaggtgaataagtggggtgttcgtggttcgaac 30668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 10377107 - 10377184
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||||||||  ||  || ||| |||||||||||| |||||||||||||||||||| | |||||||||||    
T  10377107 gtagtctagtggctagaatt--catcttataacgtgaataagtggggtgttcggggttcgaaccccggcctctgcatata 10377184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34675784 - 34675851
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    |||||||| ||||| |||||||| ||| ||||||| |||||||| ||| |||| ||||||||||||||    
T  34675784 caagtagtgtagtggctagaattcacattttttaaagtgaataactggggtgtccggggttcgaaccc 34675851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 2235337 - 2235419
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||| | ||| |||||||| ||| ||| |||||| ||||||||| |||||||||||||||||  ||| |||| ||||||    
T  2235337 caagtagtttggtggctagaattcacattttgtaaggtaaataagtggtgtgttcggggttcgaacatcagcctctacatata 2235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 8176085 - 8176031
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||||||| |||||||| |||||||| |||| | |||||||||    
T  8176085 tttttaaggtgaataagtggggtgttcggagttcgaacaccagtccctgcatata 8176031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26669637 - 26669707
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||| ||||| |||||||| ||  |||| ||||||||||||||| ||||  ||||||||||||||||    
T  26669637 caagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccag 26669707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 7374044 - 7374093
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||| | |||||||||||||||||||| |||||||| ||||||||    
T  7374044 tagaatttatattttttaaggtgaataagtggggtgttcggagttcgaac 7374093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 20568267 - 20568303
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  20568267 taaggtgaataagtggggtgttcggggttcgaacccc 20568303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35190875 - 35190815
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||| |||||||| ||   || |||||||||||||||| |||||||||||||||||    
T  35190875 gtagtctagtggctagaattcacc--ttataaggtgaataagtggggtgttcggggttcgaac 35190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 1488177 - 1488123
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| ||| ||||| ||||||||||||||   |||||||||||    
T  1488177 tttttaaggtgaataaatggggtgtttggggttcgaaccccgacctctgcatata 1488123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 19165435 - 19165386
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||||  |||||||||||    
T  19165435 taaggtgaataagtggggtgt-cggggttcgaaccccaacctctgcatata 19165386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 24257025 - 24256967
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    |||||| |||||||||||  |||| ||||||||||||||| || | |||||||||||||    
T  24257025 ctagtggctagaatttacttttttcaaggtgaataagtggggtatccggggttcgaacc 24256967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 29430296 - 29430350
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||  |||| ||||||||||||||| |||| || |||||||||||||    
T  29430296 ctagaatttacctttttaaaggtgaataagtggggtgtccgaggttcgaacccca 29430350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 6658550 - 6658603
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||| |||||||||| |||| ||||||||||||||| | | |||||||||    
T  6658550 ttttaaggagaataagtggggtgtccggggttcgaaccccggcccctgcatata 6658603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 33628948 - 33628989
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||| |||||||||||| |||| |||||||||||||||||    
T  33628948 ttttaaagtgaataagtggggtgtccggggttcgaaccccag 33628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 9435704 - 9435664
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  9435704 aagtggagtgtccggggttcgaaccccagcccctgcatata 9435664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 9491745 - 9491781
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  9491745 taaggtgaataagtggggtgtccggggttcgaacccc 9491781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10443230 - 10443166
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    ||||||||||| |||||| |||| |   ||||||||||| ||||||||  |||||||||||||||    
T  10443230 caagtagtctaatgactaaaattcatcttttttaaggtggataagtgggttgttcggggttcgaa 10443166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 13094538 - 13094510
Alignment:
Q  40 aataagtggagtgttcggggttcgaaccc 68  Q
    |||||||||||||||||||||||||||||    
T  13094538 aataagtggagtgttcggggttcgaaccc 13094510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 13158701 - 13158741
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  13158701 aagtggggtgtccggggttcgaaccccagtctctgcatata 13158741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 13163557 - 13163597
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||| ||||||||||||||||| |||||||||||    
T  13163557 aagtggggtgtccggggttcgaaccccagtctctgcatata 13163597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 17347368 - 17347304
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    |||||||| ||  ||||||||||  |||||||||||||||||||| |||| |  |||||||||||    
T  17347368 gtagtctaatggttagaatttaccttttttaaggtgaataagtggggtgtccaaggttcgaaccc 17347304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 19374832 - 19374872
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  19374832 aagtggagtgttcggggttcgaaccccaacccctgcatata 19374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 29204875 - 29204915
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| |||||||  |||||||||||    
T  29204875 tttttaaggtgaataagtggggtgttcgaagttcgaacccc 29204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 32394141 - 32394062
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcata 81  Q
    |||||||||||||| |||||||| |   |||||||||||||||||||| |||| |||| ||| |||| ||  |||||||||    
T  32394141 caagtagtctagtggctagaattaatt-tttttaaggtgaataagtggggtgtccgggattcaaacctcaacctctgcata 32394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 34365820 - 34365784
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  34365820 taagatgaataagtggagtgttcgaggttcgaacccc 34365784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 34524958 - 34524910
Alignment:
Q  35 aggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| |||||||||| ||||||||| | | |||||||||    
T  34524958 aggtgaataagtggggtgttcggggctcgaaccccggcccctgcatata 34524910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 31004111 - 31004177
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||| |||||||||||||||||  ||||||||||||||||||||| ||| |||||||| |||||||    
T  31004111 gtagtttagtgactagaatttaccttttttaaggtgaataagtggaatgtccggggttcaaacccca 31004177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 40384367 - 40384286
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| ||||| |||||||| ||  |||||||||||||||||||| |||| ||| ||||||||||||| | |||||||||    
T  40384367 aagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgtccggagttcgaaccccagccgctgcatata 40384286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27095514 - 27095596
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| |||||||| ||| ||||| || ||||||| ||  ||||  |||||||||||||||| |||||||||||    
T  27095514 caagtagtctagtggctagaattcacattttttcagatgaataaatgaggtgtctggggttcgaaccccagcctctgcatata 27095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 32158424 - 32158474
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||||||||||||||||||| | | |||||||||    
T  32158424 taaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatata 32158474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3535917 - 3535982
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||  ||||||| ||  |||||||||||||||||||| |||| |||||||||||||||    
T  3535917 gtagcctagtggttagaattcactttttttaaggtgaataagtggggtgtccggggttcgaacccc 3535982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 18872607 - 18872570
Alignment:
Q  32 ttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  18872607 ttaaggtgaataagtggggtgttcggggttcgaacccc 18872570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 22687862 - 22687969
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatat---agccaactgagctatgct 100  Q
    |||||||||||  ||||||| ||  |||| ||||||||||||||| ||||||||||||| ||| |||  | || ||| |    |||||||||||||||||    
T  22687862 gtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgttcggggttcaaactccaacccctacatgtccctgccaactgagctatgct 22687961  T
Q  101 cacgggga 108  Q
    ||||||||    
T  22687962 cacgggga 22687969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 28378075 - 28378112
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||||| |||||||||||||||||||||    
T  28378075 taaggtgaataagtggggtgttcggggttcgaacccca 28378112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 10943828 - 10943751
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| |||||| |||||||| ||  ||||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  10943828 gtagcctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 10943751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 18303085 - 18303125
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  18303085 ttttaaagtgaataagtggggtgttcggggttcgaacccca 18303125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 24397936 - 24397976
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  24397936 tttttaaggtgaataagtggggtgatcggggttcgaacccc 24397976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 28537252 - 28537184
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||| |||||| |||||||| ||  |||| || |||||||||||| |||| |||||||||||||||    
T  28537252 caagtagcctagtggctagaattcaccattttcaaagtgaataagtggggtgtccggggttcgaacccc 28537184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 29331328 - 29331292
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||||||||||||||||||||||||||||    
T  29331328 taagatgaataagtggagtgttcggggttcgaacccc 29331292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 41477350 - 41477390
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  41477350 aagtggagtgttcggggttcgaaccccagcccctgcatata 41477390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 42553135 - 42553187
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||| ||| |||| |||||||||||||| ||||| |||||||||||||||    
T  42553135 tagaattcacatttttcaaggtgaataagtgtagtgtccggggttcgaacccc 42553187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 19608728 - 19608662
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||| |||||||| |   ||||||||||||||||||| ||||| ||| |||||||||||    
T  19608728 aagtagtctagtg-ctagaattcattttttttaaggtgaataagtgaagtgtccggagttcgaacccc 19608662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 20191525 - 20191490
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| |||||||||||||||    
T  20191525 aaggtgaataagtggagtgtccggggttcgaacccc 20191490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 20762393 - 20762329
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||||||||| ||   || |||||||||||||||| |||| | ||||||||||||||    
T  20762393 gtagtctagtgactagaattcacc--ttataaggtgaataagtggggtgtccagggttcgaacccca 20762329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 843351 - 843414
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| |||||| ||||||||  || ||| |||||||||||||||| |||| |||||||||||||||    
T  843351 gtagcctagtggctagaatt--caatttataaggtgaataagtggggtgtccggggttcgaacccc 843414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 20220208 - 20220138
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    ||||| || |||||| ||||||| ||| |||||||||| ||||||||| |||| |  ||||||||||||||    
T  20220208 caagttgtttagtgattagaattcacattttttaaggtaaataagtggggtgtccaaggttcgaaccccag 20220138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31280358 - 31280423
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    ||||||||||||||  ||||||| ||  |||| |||||| |||||||| ||||||||||||||||||    
T  31280358 caagtagtctagtgggtagaattcacctttttcaaggtggataagtgg-gtgttcggggttcgaacc 31280423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 42455404 - 42455454
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||| |||||||||||| || | | |||||||||    
T  42455404 taaggtgaataagtggagtgtccggggttcgaactccggcccctgcatata 42455454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 1463959 - 1463906
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  1463959 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 1463906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 11736989 - 11736928
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||  |||||||| ||  |||||||||||||||||| |||||| ||| ||||||||    
T  11736989 tagtctagtcgctagaattcaccttttttaaggtgaataagttgagtgtccggagttcgaac 11736928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 66
Target Start/End: Complemental strand, 12263019 - 12262990
Alignment:
Q  37 gtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||||||||||||||||||||||    
T  12263019 gtgaataagtggagtgttcggggttcgaac 12262990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 17137848 - 17137913
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||  ||||||| ||  |||| ||||||||||||||||||||  ||||||||||||||    
T  17137848 gtagcctagtggttagaattcacgtttttcaaggtgaataagtggagtgtcgggggttcgaacccc 17137913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 27006442 - 27006389
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||| ||  |||| |||||||||||||||||||| ||| |||||||||||    
T  27006442 ctagaattcacctttttcaaggtgaataagtggagtgtccggagttcgaacccc 27006389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 31200874 - 31200837
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  31200874 taaggtgaataagtgaagtgtttggggttcgaacccca 31200837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 31556927 - 31556870
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||| |||||||| ||  |||| ||||||||||||||| |||| ||||||||||||    
T  31556927 ctagtggctagaattcacccttttcaaggtgaataagtggggtgtccggggttcgaac 31556870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 2029138 - 2029170
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaa 65  Q
    |||||||||||||||| ||||||||||||||||    
T  2029138 taaggtgaataagtggggtgttcggggttcgaa 2029170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 5932030 - 5932069
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  5932030 tttttaaggagaataagtggagtgttc-gggttcgaacccc 5932069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 8015920 - 8015884
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  8015920 taaggtgaataagtggggtgtccggggttcgaacccc 8015884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8934898 - 8934830
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| ||  ||||||||||  |||| ||||||||||||||| || | ||||| |||||||||    
T  8934898 caagtagtctaatggttagaatttacctttttaaaggtgaataagtggggtatccggggctcgaacccc 8934830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 22396967 - 22397034
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||| |||||| |||||||| ||  |||| ||| ||||||||||| |||| |||||||||||||||    
T  22396967 caagtagcctagtg-ctagaattcacccttttcaagatgaataagtggggtgtccggggttcgaacccc 22397034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36480243 - 36480295
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgt 53  Q
    |||||||| ||||||||| |||||| | |||||||||||||| ||| ||||||    
T  36480243 caagtagtatagtgactaaaatttatattttttaaggtgaatgagttgagtgt 36480295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 38129019 - 38129059
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| |||||||||||||||||||| | |||||||||||||    
T  38129019 ttttcaaggtgaataagtggagtgtccagggttcgaacccc 38129059  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 38618691 - 38618727
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  38618691 taaggtgaataagtggggtgtccggggttcgaacccc 38618727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 42595824 - 42595776
Alignment:
Q  35 aggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| ||||||||||||| |||||| | | |||||||||    
T  42595824 aggtgaataagtggggtgttcggggttcaaaccccggtccctgcatata 42595776  T

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Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 49039424 - 49039505
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||| |||||||| ||  |||| ||||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  49039424 aagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaaccccagtccctgcatata 49039505  T

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Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 54854157 - 54854239
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| |||||||| ||  |||| ||||||||||||||   ||| ||||||||||||||||| | |||||||||    
T  54854157 caagtagtctagtggctagaattcacttttttcaaggtgaataagtgtgatgtccggggttcgaaccccagcccctgcatata 54854239  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 20610853 - 20610774
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||||||| ||  ||||||||||||||||||||  ||| ||| ||||||||||| | | |||||||||    
T  20610853 gtagtctagtggctagaattcaccttttttaaggtgaataagtgggatgtccggagttcgaaccccggcccctgcatata 20610774  T

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Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 7768794 - 7768848
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| |||||||||||| |||| ||||||||||||||| | |||||||||||    
T  7768794 tttttaaagtgaataagtggggtgtccggggttcgaaccccggcctctgcatata 7768848  T

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Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 21752887 - 21752833
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||| ||||||||||||||| ||||||| |||||||| | |||||||||    
T  21752887 tttttaaggtaaataagtggagtgtttggggttcaaaccccagcccctgcatata 21752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 36008360 - 36008310
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||||||||||||||||||| | | |||||||||    
T  36008360 taaggtgaataagtggggtgttcggggttcgaaccccggcccctgcatata 36008310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 37997852 - 37997906
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||||||| ||||  |||||||||||||||| | |||||||||    
T  37997852 tttttaaggtgaataagtggggtgtctggggttcgaaccccagaccctgcatata 37997906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12585537 - 12585602
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||| |||||||| ||  |||| ||| ||||||||||  |||||||||||||||||    
T  12585537 caagtagtctagtggctagaattcacctttttcaagatgaataagtgaggtgttcggggttcgaac 12585602  T

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Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 31480385 - 31480324
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    |||||||||||||  ||||||| ||   ||||||||||||||||||| ||||||||||||||||    
T  31480385 aagtagtctagtggttagaattcacg--ttttaaggtgaataagtggggtgttcggggttcgaa 31480324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37914669 - 37914722
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcg 56  Q
    |||||||||||||||||| | |||||  ||||||| ||||||||||||||||||||    
T  37914669 caagtagtctagtgactaaattttac--tttttaatgtgaataagtggagtgttcg 37914722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9285639 - 9285719
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| |||||||| ||   || |||||| ||||||||| ||||  |||||||||||||||| | |||||||||    
T  9285639 caagtagtctagtggctagaattcacc--ttataaggttaataagtggggtgtctggggttcgaaccccagaccctgcatata 9285719  T

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Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 9924940 - 9924905
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| |||||||||||||||    
T  9924940 aaggtgaataagtggagtgtccggggttcgaacccc 9924905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 18497506 - 18497427
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||| |||||||||||| |  ||||||||| ||||||||||  ||| ||| ||||||||||||  | |||||||||    
T  18497506 gtagtctattgactagaattttctttttttaaggagaataagtgggatgtccggagttcgaaccccaacccctgcatata 18497427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30203371 - 30203288
Alignment:
Q  1 caagtagtctagtgactagaatttacagttttt-aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| ||||||  ||||||  ||| ||||| ||| |||||||||||||| | ||||||||||||||| | |||||||||||    
T  30203371 caagtagcctagtggttagaatacacattttttcaagatgaataagtggagtatccggggttcgaaccccggcctctgcatata 30203288  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 36257807 - 36257743
Alignment:
Q  3 agtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||| |||||| |||||||| ||  ||||||| |||||||||||| |||| |||||||||||||||    
T  36257807 agtagcctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaacccc 36257743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 6637732 - 6637782
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| ||||||||||| |||||||||||||||||||||  | |||||||||    
T  6637732 taagatgaataagtggggtgttcggggttcgaaccccaacccctgcatata 6637782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15507663 - 15507581
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| || |||||||| | | |||| || || ||| ||||| |||||||||||||||||||||  | |||||||||    
T  15507663 caagtagtctaatggctagaattcatatttttcaaagtaaattagtggggtgttcggggttcgaaccccaacccctgcatata 15507581  T

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Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 29785239 - 29785197
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||| ||||||||||||||| |||| |||||||||||||||||    
T  29785239 ttttcaaggtgaataagtggggtgtccggggttcgaaccccag 29785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 47017956 - 47018006
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  47017956 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 47018006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 53815777 - 53815731
Alignment:
Q  37 gtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||| |||| ||||||||||||||||| | |||||||||    
T  53815777 gtgaataagtggggtgtccggggttcgaaccccagcccctgcatata 53815731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 6481571 - 6481644
Alignment:
Q  10 tagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| ||  |||||||||||||||||||| | ||  | |||||||||| | | |||||||||||    
T  6481571 tagtgactagaattcaccatttttaaggtgaataagtggggcgtctgaggttcgaacctcggcctctgcatata 6481644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 9693050 - 9692997
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  9693050 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 9692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 14149881 - 14149828
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  14149881 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 14149828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23226683 - 23226752
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||| ||||| ||| |||| ||| |||||||||||||||||||   ||| ||| ||||||||||||    
T  23226683 caagtagtatagtggctataattcacattttttaaggtgaataagtgagatgtccggtgttcgaacccca 23226752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24039986 - 24039933
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||| ||  |||| ||||||||||||||  ||||||||||||||||||||    
T  24039986 ctagaattcacctttttcaaggtgaataagtgaggtgttcggggttcgaacccc 24039933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 28520738 - 28520791
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  28520738 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 28520791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 30616107 - 30616049
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||||| ||  ||||||| |||||||||||| |||| ||||| |||||||||    
T  30616107 ctagtgactagaattcac--tttttaaagtgaataagtggggtgtccggggctcgaacccc 30616049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 33359933 - 33359868
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    |||||| |||||| |||||||| ||  |||| ||||||||||||||| |||| | |||||||||||    
T  33359933 aagtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccagggttcgaacc 33359868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 48501665 - 48501718
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||||||  ||||||||||||| | |||||||||    
T  48501665 ttttaaagtgaataagtggggtgttcgatgttcgaaccccagcccctgcatata 48501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 48968217 - 48968270
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  48968217 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 48968270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 51640496 - 51640459
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  51640496 tttttaaggtgaataagtggggtgttcgaggttcgaac 51640459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 1297938 - 1297906
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaa 65  Q
    ||||||||||||||||||||||| |||||||||    
T  1297938 taaggtgaataagtggagtgttcagggttcgaa 1297906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 3465695 - 3465618
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||||||| ||   || |||||||||||||||| |||| |||||||||||| || | | |||||||||    
T  3465695 gtagtctagtggctagaattcacc--ttataaggtgaataagtggggtgtccggggttcgaactccggcccctgcatata 3465618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 23449053 - 23449021
Alignment:
Q  38 tgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||||||||| |||||||||||||||||||||    
T  23449053 tgaataagtggggtgttcggggttcgaacccca 23449021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 33076619 - 33076579
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||| | |||| |||||||||||||||    
T  33076619 tttttaaggtgaataagtagggtgtccggggttcgaacccc 33076579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 40051307 - 40051343
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  40051307 tttttaaggtgaataagtggggtgttcgggattcgaa 40051343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42411433 - 42411500
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||| |||||| |||||| || || ||||||| || ||||||||| |||| |||||||||||||||    
T  42411433 caagtagcctagtggctagaaatt-cactttttaaagtaaataagtggggtgtccggggttcgaacccc 42411500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 48542227 - 48542171
Alignment:
Q  13 tgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| | | |||| ||||||||||||||||||||  |||||| |||||||    
T  48542227 tgactagaattaagatttttcaaggtgaataagtggagtgtctggggtttgaacccc 48542171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 52556681 - 52556721
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||| ||||||||||||||||||  |||||||||||    
T  52556681 tttttaaggagaataagtggagtgttcgatgttcgaacccc 52556721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 4604359 - 4604399
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4604359 tttttaaggtgaataagtggagtgttcggggttcgaacccc 4604399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 10970351 - 10970301
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||||||||||| ||||||||| | |||||||||    
T  10970351 taaggtgaataagtggggtgttcggggtttgaaccccagcccctgcatata 10970301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 26773696 - 26773762
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| ||| |||||||| |||||||||||| |||||||||||||||| ||   |||||||||||    
T  26773696 tagaattcacattttttaagatgaataagtggaatgttcggggttcgaactccgacctctgcatata 26773762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 8034615 - 8034579
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  8034615 taaggtgaataagtggggtgttcggggttcgaacccc 8034579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 22438563 - 22438627
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||| |||||||| ||||||| ||  ||||||||||||||||||||||||| ||| ||| ||||    
T  22438563 aagtaatctagtgattagaattcaccttttttaaggtgaataagtggagtgtccggagtttgaac 22438627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 220340 - 220407
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||||||||  ||||||| ||  |||| ||||||||||||||| |||| |||| |||||||||    
T  220340 caagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 220407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 689495 - 689562
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||||||||  ||||||| ||  |||| ||||||||||||||| |||| |||| |||||||||    
T  689495 caagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 689562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 733963 - 734030
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||||||||  ||||||| ||  |||| ||||||||||||||| |||| |||| |||||||||    
T  733963 caagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 857859 - 857926
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||||||||  ||||||| ||  |||| ||||||||||||||| |||| |||| |||||||||    
T  857859 caagtagtctagtggttagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaaccc 857926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 6978931 - 6978855
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||| || |||||||| ||  ||| |||||||||||| ||||||||||| |||||||||||||  | |||||||||    
T  6978931 tagtctaatggctagaattcac--tttataaggtgaataaatggagtgttcgtggttcgaaccccaacccctgcatata 6978855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 12926457 - 12926524
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||| |||||||||||  |||| ||| ||||||||||  |||| |||| ||||||||||    
T  12926457 aagtagtctagtggctagaatttacctttttcaagatgaataagtgaggtgtccgggattcgaacccc 12926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 5184897 - 5184947
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| | ||||||||||||||| | |||||||||    
T  5184897 taaggtgaataagtggggtgtccagggttcgaaccccagcccctgcatata 5184947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 7649613 - 7649575
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  7649613 taaggtgaataagtggggtgttcgaggttcgaaccccag 7649575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 10199752 - 10199802
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| ||||| |||||||||||||| | | |||||||||    
T  10199752 taaggtgaataagtggggtgtttggggttcgaaccccggcccctgcatata 10199802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 14683988 - 14683925
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| ||   || ||||||||||||||||  ||| |||||||||||||||    
T  14683988 gtagtctagtgactagaattcacc--ttataaggtgaataagtgggatgtccggggttcgaacccc 14683925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 15042375 - 15042425
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  15042375 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 15042425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 30942609 - 30942659
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| ||||||||| |||||||||||||||||||| | | |||||||||    
T  30942609 taaggtaaataagtggggtgttcggggttcgaaccccggcccctgcatata 30942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 33524477 - 33524431
Alignment:
Q  37 gtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||| |||| ||||||||||||||| | |||||||||||    
T  33524477 gtgaataagtggggtgtccggggttcgaaccccggtctctgcatata 33524431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 37989035 - 37989101
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||| | |||||||||||||||||||| |||||||| |||| ||| |||  |||||| ||||    
T  37989035 tagaatttatattttttaaggtgaataagtggggtgttcggagttcaaactccaatctctgcctata 37989101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 2696621 - 2696568
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  2696621 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 2696568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 2800107 - 2800054
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  2800107 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 2800054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 4798552 - 4798601
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  4798552 aaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 4798601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 18030744 - 18030703
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||||||| | |||||||||||||||| ||||    
T  18030744 tttttaaggtgaataagtagggtgttcggggttcgaatccca 18030703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 10573179 - 10573139
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  10573179 aagtggagtgttcggggttcgaaccccaacccctgcatata 10573139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 14010782 - 14010818
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  14010782 taaggtgaataagtggggtgtccggggttcgaacccc 14010818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 17467367 - 17467327
Alignment:
Q  28 gtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||| ||||||||||||||| |||| ||||||||||||||    
T  17467367 gttttcaaggtgaataagtggggtgtccggggttcgaaccc 17467327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 19925105 - 19925145
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  19925105 tttttaaggtgaataagtgaggtgttcgggattcgaacccc 19925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 28979135 - 28979079
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaa 65  Q
    ||||| |||| |||| ||| |||||||||||||||||||  |||| |||||||||||    
T  28979135 ctagtaactataattcacattttttaaggtgaataagtgaggtgtccggggttcgaa 28979079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 30542849 - 30542813
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||| |||| |||||||||||||||||||    
T  30542849 taaggtgaataaatggaatgttcggggttcgaacccc 30542813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 21248971 - 21249050
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||||||| ||  |||| ||||||||||||||| |||||| ||||||||||||| | | |||||||||    
T  21248971 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgttcagggttcgaaccccggcccctgcatata 21249050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28951967 - 28951916
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||| ||| |||| ||||||||||||||| |||||||||||||||||||    
T  28951967 tagaattcacatttttcaaggtgaataagtggggtgttcggggttcgaaccc 28951916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 33206842 - 33206792
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||||| | |||||||||    
T  33206842 taaggtgaataagtggggtgtccggggttcgaaccccagcccctgcatata 33206792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 36331709 - 36331772
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| |||||||| ||  ||||||| |||||||||||| |||| |||||||||||||||    
T  36331709 gtagtctagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaacccc 36331772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40160852 - 40160782
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    ||||||| |||||| |||||||| ||  |||| ||||||||||||||| |||| |||||||| ||||||||    
T  40160852 caagtagcctagtggctagaattcacctttttaaaggtgaataagtggggtgtccggggttcaaaccccag 40160782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 47191458 - 47191408
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| ||||||||||||||||| |||| | |||||||||    
T  47191458 taaggtgaataagtggggtgttcggggttcgaactccagcccctgcatata 47191408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 14868773 - 14868720
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||||||||||||||||||| | | |||||||||    
T  14868773 ttttaaagtgaataagtggggtgttcggggttcgaaccccggcccctgcatata 14868720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 31419671 - 31419630
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  31419671 ttttaaggtgaataagtggggtgtttggggttcgaaccccag 31419630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 32080157 - 32080104
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||| ||  |||| ||||||||||||||| ||||||||||||||||||||    
T  32080157 ctagaattcacctttttcaaggtgaataagtggggtgttcggggttcgaacccc 32080104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24160506 - 24160574
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||| ||| |||||||| |   |||| || ||||||||||||||||| |||||||||||||||    
T  24160506 caagtagtctggtggctagaattcaactttttgaaagtgaataagtggagtgtccggggttcgaacccc 24160574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 31902188 - 31902251
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||| ||| |||||||  |||||||||||||||||||| |||| ||| |||||||||||    
T  31902188 tagtctagtggctaaaatttacc-tttttaaggtgaataagtggggtgtccggagttcgaacccc 31902251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 32508804 - 32508840
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| ||||||||||||||||||||    
T  32508804 taaggtgaataagtggggtgttcggggttcgaacccc 32508840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 50144616 - 50144652
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||||||||||| |||||||||||||||    
T  50144616 taaggtgaataagtggagtgtccggggttcgaacccc 50144652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 50676878 - 50676914
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||||||||||||| |||||||||||||||||||||    
T  50676878 aaggtgaataagtggggtgttcggggttcgaacccca 50676914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 50724479 - 50724402
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| |||||| |||||||| ||  |||||||||||||||||||| |||| || |||||||||||||  | |||||||||    
T  50724479 gtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatata 50724402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 50788369 - 50788446
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| |||||| |||||||| ||  |||||||||||||||||||| |||| || |||||||||||||  | |||||||||    
T  50788369 gtagcctagtggctagaattcac--tttttaaggtgaataagtggggtgtccgaggttcgaaccccaacccctgcatata 50788446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 27119390 - 27119311
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||  |  |||| ||||  ||||||||| ||||||||| ||||||||||   |||||||||||    
T  27119390 gtagtctagtgactagaattctcctttttaaaggaaaataagtggggtgttcgggattcgaaccccgacctctgcatata 27119311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 37756424 - 37756471
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcata 81  Q
    ||||||||||||||| ||||| |||||||||||||||| | |||||||    
T  37756424 aaggtgaataagtggggtgtttggggttcgaaccccagcccctgcata 37756471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 49639112 - 49639077
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||||| ||||||||||||||||||||    
T  49639112 aaggtgaataagtggggtgttcggggttcgaacccc 49639077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3955420 - 3955357
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||| ||||| |||||||| ||  ||||||| |||||||||||| |||| |||||||||||||||    
T  3955420 gtagtttagtggctagaattcac--tttttaaagtgaataagtggggtgtccggggttcgaacccc 3955357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8724888 - 8724823
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    ||||||||||||||  ||||| || || ||||||||||||||||||||||| | || ||||||||||    
T  8724888 caagtagtctagtggttagaaatt-cattttttaaggtgaataagtggagtctccgcggttcgaacc 8724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9076775 - 9076710
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    ||||||||||||||  ||||| || || ||||||||||||||||||||||| | || ||||||||||    
T  9076775 caagtagtctagtggttagaaatt-cattttttaaggtgaataagtggagtctccgcggttcgaacc 9076710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 14417953 - 14417903
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| |||||||||||| |||| | |||||||||    
T  14417953 taaggtgaataagtggggtgtccggggttcgaactccagcccctgcatata 14417903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 16985136 - 16985070
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    |||||||||| |  |||||||| ||  ||||||| |||||||||||||||||||| ||||| |||||    
T  16985136 aagtagtctaatagctagaattcactttttttaaagtgaataagtggagtgttcgaggttcaaaccc 16985070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18399632 - 18399699
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||| |||||||| ||   ||||||||||||| ||| | |||| ||||||||||||||||    
T  18399632 caagtagtctagtggctagaattcacc--ttttaaggtgaatgagtagcgtgtccggggttcgaacccca 18399699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 22432905 - 22432971
Alignment:
Q  17 tagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||  |||| || ||||||||||||||||| ||||||| ||||||| | | |||||||||    
T  22432905 tagaatttacctttttcaaagtgaataagtggagtgtccggggtttgaaccccggcccctgcatata 22432971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 24537912 - 24537862
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  24537912 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 24537862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 35483381 - 35483318
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| |||||||||||   || |||||||||||||||| |||| |||| ||||||||||    
T  35483381 gtagtctagtggctagaatttacc--ttataaggtgaataagtggggtgtccgggattcgaacccc 35483318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 46328934 - 46328984
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  46328934 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 46328984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49299218 - 49299287
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||| |||||||| |   || | ||||||||||||||||||| || |||||||||||||||    
T  49299218 caagtagtctagtggctagaattcagctttctcaaggtgaataagtggagtg-tctgggttcgaaccccag 49299287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 4478349 - 4478414
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| ||| |||||||| |||| ||| |||||||||||  ||| |||| ||||||||||    
T  4478349 gtagtctagtggctaaaatttacatttttaaagatgaataagtgggatgtccgggattcgaacccc 4478414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 9625071 - 9625018
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  9625071 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 9625018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 10959245 - 10959182
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||| || || |||| ||| ||||||||||| |||| |||||||||||||||    
T  10959245 gtagtctagtgactagaaatt-cacttttaaag-tgaataagtggggtgtccggggttcgaacccc 10959182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 17262336 - 17262255
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatat 82  Q
    |||||||| || ||| ||||||| ||  |||| ||||||||||||||| |||| |||| |||||||| ||| | ||||||||    
T  17262336 caagtagtttaatgattagaattcacctttttcaaggtgaataagtggggtgtccgggattcgaacctcagcccctgcatat 17262255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 27183688 - 27183741
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  27183688 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 27183741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 27394591 - 27394542
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||| |||| |||||||| |||||||| | |||||||||    
T  27394591 aaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatata 27394542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 28226194 - 28226247
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| ||||||||| |||||||||||  | |||||||||    
T  28226194 ttttaaagtgaataagtggggtgttcgggattcgaaccccaacccctgcatata 28226247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 36476447 - 36476394
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| ||||||||||||||||| || | | |||||||||    
T  36476447 ttttaaagtgaataagtggggtgttcggggttcgaactccggcccctgcatata 36476394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 2732748 - 2732712
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  2732748 taaggtgaataagtggggtgtccggggttcgaacccc 2732712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24130676 - 24130608
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||| |||| ||| |   |||| ||||||||||||||| |||| |||||||| ||||||    
T  24130676 caagtagtctagtggctagtattcaactttttcaaggtgaataagtggggtgtccggggttcaaacccc 24130608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 38507751 - 38507695
Alignment:
Q  13 tgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| | | |||||||||||||||||||| |||||  ||||| |||||||    
T  38507751 tgactagaattcagattttttaaggtgaataagtggggtgtttagggtttgaacccc 38507695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 42665904 - 42665968
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||| ||||||| |   |||| ||||||||||||||| |||| ||| ||||||||    
T  42665904 aagtagtctagtgattagaattcatttttttcaaggtgaataagtggggtgtccggagttcgaac 42665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 42832072 - 42832108
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||| |||||||| |||||||||||||||    
T  42832072 taaggtgaataaatggagtgtccggggttcgaacccc 42832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 49028935 - 49028975
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||| | | |||||||||    
T  49028935 aagtggagtgttcggggttcgaaccccggtccctgcatata 49028975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 35352382 - 35352444
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcg 63  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||| ||||  ||||||||    
T  35352382 caagtagtctagtgactagaattcacatttttcaaggtgaataagtggggtgtctggggttcg 35352444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 1244683 - 1244602
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatatagc 85  Q
    ||||||||||| |||||||| ||  |||| ||||||||||||||| |||| |||||||||||||||   | |||||||||||    
T  1244683 gtagtctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccccacccctgcatatagc 1244602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 9937514 - 9937575
Alignment:
Q  45 gtggagtgttcggggttcgaaccccaggctctgcatatagccaactgagctatgctcacggg 106  Q
    ||||||||||||||||| ||||||||| | ||||||||| | |||||||||| |||||||||    
T  9937514 gtggagtgttcggggtttgaaccccagcccctgcatataacaaactgagctaagctcacggg 9937575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 37516106 - 37516038
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||||| ||||| |||||||| | | |||||||||||||||| | ||||||||| |||||||||||||    
T  37516106 aagtagtttagtggctagaattcatattttttaaggtgaataaatagagtgttcgaggttcgaacccca 37516038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30737098 - 30737051
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtgg 48  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  30737098 caagtagcctagtgactagaattcacattttttaaggtgaataagtgg 30737051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34107391 - 34107325
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    |||||||||||||| |||||||| ||| |||| ||||||||||||||| ||||  || |||||||||    
T  34107391 caagtagtctagtggctagaattcacatttttcaaggtgaataagtggggtgtctggagttcgaacc 34107325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 9520897 - 9520860
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9520897 tttttaaggtgaataagtggggtgttcggggttcgaac 9520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12206612 - 12206547
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| |||||| |||||||| ||  |||| |||||||||||| || ||||||||||||||||||||    
T  12206612 gtagcctagtggctagaattcacctttttcaaggtgaataagcggggtgttcggggttcgaacccc 12206547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 14307681 - 14307738
Alignment:
Q  10 tagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    ||||| |||||||| ||  ||||||| |||||||||||| ||||||||||||||||||    
T  14307681 tagtggctagaattcactttttttaaagtgaataagtggggtgttcggggttcgaacc 14307738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20942087 - 20942152
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||||||||||||||| ||  |||| ||||||||||||||  ||||  |||||||||||    
T  20942087 caagtagtctagtgactagaattcacttttttcaaggtgaataagtgaggtgtctggggttcgaac 20942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 26975305 - 26975360
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatatagc 85  Q
    ||||||| |||||||| ||| |||| ||||||||||||||||| |||||||||||||    
T  26975305 tttttaaagtgaataactgg-gtgtccggggttcgaaccccagcctctgcatatagc 26975360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 32943451 - 32943374
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||| |||||||  ||| |||||||||||||||| |||| ||   |||||||||||| |||||||||||    
T  32943451 gtagtctagtggctaaaatttac--tttataaggtgaataagtggggtgtccgaaattcgaaccccagcctctgcatata 32943374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32988465 - 32988397
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||||||||||||  || ||| ||| | |||||||||| |||||||  |||||||||||||    
T  32988465 caagtagtctagtgactagaatt--cactttataaagagaataagtggggtgttcgatgttcgaaccccag 32988397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 43684362 - 43684315
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcata 81  Q
    ||||||||||||||| |||||||||||||||||| ||| | |||||||    
T  43684362 aaggtgaataagtggggtgttcggggttcgaacctcagcccctgcata 43684315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 580793 - 580843
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  580793 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 580843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 3037632 - 3037682
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  3037632 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 3037682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 17154734 - 17154684
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  17154734 taaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 17154684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 20451862 - 20451904
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||    
T  20451862 tttttaaagtgaataagtggagtgtttggggttcgaactccag 20451904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33124343 - 33124409
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    |||||||| |||||  ||||||| ||  |||||||||||||||| ||  ||||||||||||||||||    
T  33124343 caagtagtatagtggttagaattcaccttttttaaggtgaataaatgtggtgttcggggttcgaacc 33124409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 39118507 - 39118445
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||| ||||||||  |  ||||||||| |||||||||| ||||||||| |||||||    
T  39118507 gtagtctagtggctagaattctccttttttaaggagaataagtggggtgttcgggattcgaac 39118445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 14269891 - 14269924
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||| |||||||||||||||||||||||||||||    
T  14269891 taagatgaataagtggagtgttcggggttcgaac 14269924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 29035064 - 29035011
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  29035064 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 29035011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 34018080 - 34018129
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatat 82  Q
    |||||||||||||||| |||| || |||||||||||||| | ||||||||    
T  34018080 taaggtgaataagtggggtgtccgaggttcgaaccccagcccctgcatat 34018129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Complemental strand, 41699184 - 41699151
Alignment:
Q  36 ggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||||| ||||||||||||||||||||    
T  41699184 ggtgaataagtggggtgttcggggttcgaacccc 41699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 8234802 - 8234838
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  8234802 taaggtgaataagtggggtgtccggggttcgaacccc 8234838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 11133161 - 11133125
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  11133161 taaggtgaataagtggggtgtccggggttcgaacccc 11133125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 17896934 - 17896882
Alignment:
Q  2 aagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgtt 54  Q
    ||||||| |||||  ||||||| ||| |||||||||||||||||||| |||||    
T  17896934 aagtagtttagtggttagaattcacattttttaaggtgaataagtggggtgtt 17896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 22297435 - 22297512
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||| ||||| |||||||| |||  || |||||||||||| ||| |||| ||||||||||||||| | | |||||||||    
T  22297435 gtagtttagtggctagaattaaca--ttataaggtgaataaatggggtgtccggggttcgaacccctgcccctgcatata 22297512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 22718053 - 22718081
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||||||||||||||||||    
T  22718053 aagtggagtgttcggggttcgaaccccag 22718081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 23405288 - 23405248
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  23405288 tttttaaggtgaataagtggggtgtccagggttcgaacccc 23405248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23973460 - 23973529
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||| |||||||| ||| |||| || |||||||||||| |||| ||||||||||| ||||    
T  23973460 caagtagtctagtggctagaattcacatttttcaacgtgaataagtggggtgtacggggttcgaatccca 23973529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 2350386 - 2350433
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccccaggctctgcata 81  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||    
T  2350386 aaggtgaataagtggggtgttcggggttcgaaccccagtccctgcata 2350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23758230 - 23758297
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaat-aagtggagtgttcggggttcgaacc 67  Q
    ||||||||||||||  ||||||| ||| |||||||| ||||| |||||| ||||||||||||||||||    
T  23758230 caagtagtctagtggttagaattcacaatttttaagatgaataaagtggggtgttcggggttcgaacc 23758297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 50199457 - 50199536
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| |||||| |||||||| ||  |||| ||||||||||||||| |||| ||||||||||||||| | | |||||||||    
T  50199457 gtagcctagtggctagaattgacctttttcaaggtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 50199536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 2903033 - 2903087
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| ||||||||||||||| ||||||||||||||||||||   |||||||||||    
T  2903033 ttttcaaggtgaataagtggggtgttcggggttcgaaccccgacctctgcatata 2903087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 7906312 - 7906386
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||| ||| |||||||||| |||||| || |||| | ||||||||||||||| | |||||||||    
T  7906312 ctagtggctagaattcacattttttaaggtcaataagcggggtgtcccgggttcgaaccccagcccctgcatata 7906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 26349966 - 26350024
Alignment:
Q  10 tagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    ||||||||| |||| | | |||||||||||||||||||| ||||| |||||||||||||    
T  26349966 tagtgactaaaattcatattttttaaggtgaataagtggggtgtttggggttcgaaccc 26350024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 3046154 - 3046199
Alignment:
Q  8 tctagtgactagaatttacagtttttaaggtgaataagtggagtgt 53  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||    
T  3046154 tctagtgactagaatttaccttttttaaggtgaataagtggggtgt 3046199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 33844734 - 33844630
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatatagccaactgagctatgct 100  Q
    |||||||||||||| ||| |||| ||  |||| || |||||||||||| |||| |||||||||||||||   |  |||||   ||||||||||||| |||    
T  33844734 caagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaaccccgatccttgcat---gccaactgagctaagct 33844638  T
Q  101 cacgggga 108  Q
    ||||||||    
T  33844637 cacgggga 33844630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33949244 - 33949348
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatatagccaactgagctatgct 100  Q
    |||||||||||||| ||| |||| ||  |||| || |||||||||||| |||| |||||||||||||||   |  |||||   ||||||||||||| |||    
T  33949244 caagtagtctagtggctataattcacctttttcaaagtgaataagtggggtgtccggggttcgaaccccgatccttgcat---gccaactgagctaagct 33949340  T
Q  101 cacgggga 108  Q
    ||||||||    
T  33949341 cacgggga 33949348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 11802002 - 11802067
Alignment:
Q  3 agtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    ||||||||||||||||||||||||   || ||| |||||||| || ||||| ||||||||||||||||    
T  11802002 agtagtctagtgactagaatttac--cttataacgtgaataaatgaagtgtccggggttcgaacccca 11802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 28056991 - 28057071
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata-gccaactgagctatgctcacgggga 108  Q
    |||| ||||||||||||||| ||||||||| | |||||||||  |  |||||||| | ||||||||||| |||||||||||    
T  28056991 ttttaaaggtgaataagtggggtgttcgggatccgaaccccaacccttgcatatatgtcaactgagctaagctcacgggga 28057071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 42946475 - 42946527
Alignment:
Q  31 tttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||||| |||| |||||||| |||||||| | |||||||||    
T  42946475 tttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatata 42946527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 47642974 - 47643014
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||||||||||||| | |||||||||||    
T  47642974 aagtggagtgttcggggttcgaaccccggcctctgcatata 47643014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 32635226 - 32635175
Alignment:
Q  32 ttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||||| |||| ||||||||||||||||  | |||||||||    
T  32635226 ttaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatata 32635175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 42832054 - 42831982
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||||| ||   || |||||||||||||||| |||| ||||||| ||||||||| | |||||||||    
T  42832054 ctagtgactagaattcacc--ttataaggtgaataagtggggtgtccggggtttgaaccccagcccctgcatata 42831982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 538339 - 538389
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||||| ||||||||||||||||| || | | |||||||||    
T  538339 taaggtgaataagtggggtgttcggggttcgaactccggcccctgcatata 538389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 1661032 - 1660978
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||| |||| |||| |||||||||||||||||||||||||| | | |||||||||    
T  1661032 ttttcaaggagaatgagtggagtgttcggggttcgaaccccggcccctgcatata 1660978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 3341722 - 3341796
Alignment:
Q  9 ctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||| ||  |||| ||||||||||||||| |||| |||||||||| |||| | | |||||||||    
T  3341722 ctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgatccccggcccctgcatata 3341796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9931204 - 9931134
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||   ||||||| ||  | |||||||||||||||||| ||||| ||||||||||| ||||    
T  9931204 caagtagtctagtagttagaattcaccttctttaaggtgaataagtggggtgtttggggttcgaactccag 9931134  T

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Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 35195622 - 35195656
Alignment:
Q  34 aaggtgaataagtggagtgttcggggttcgaaccc 68  Q
    |||||||||||||||||||| ||||||||||||||    
T  35195622 aaggtgaataagtggagtgtacggggttcgaaccc 35195656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 69
Target Start/End: Original strand, 41833547 - 41833581
Alignment:
Q  35 aggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||| ||||||||||||||||||||    
T  41833547 aggtgaataagtggggtgttcggggttcgaacccc 41833581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43020728 - 43020646
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||  ||||| |||||||| ||| |||| ||||||||| ||||| |||| || |||||||||||||  | |||||||||    
T  43020728 caagtagcgtagtggctagaattcacatttttcaaggtgaatgagtggggtgtccgaggttcgaaccccaacccctgcatata 43020646  T

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Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 48260182 - 48260232
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||| ||| |||| ||||||||||||||| |||| ||||||||||||    
T  48260182 ctagaattcacatttttcaaggtgaataagtggggtgtccggggttcgaac 48260232  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 1031672 - 1031639
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaac 66  Q
    |||||||||||||||| |||||||||||||||||    
T  1031672 taaggtgaataagtggggtgttcggggttcgaac 1031639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 2643796 - 2643861
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||  |||| || ||| |||||||||||||||||||| ||||  ||||||| ||||||    
T  2643796 gtagtctagtggttagagttcacattttttaaggtgaataagtggggtgtctggggttcaaacccc 2643861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 9768802 - 9768855
Alignment:
Q  16 ctagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||| ||  |||| ||||||||||||||| |||| |||||||||||||||    
T  9768802 ctagaattcacctttttcaaggtgaataagtggggtgtccggggttcgaacccc 9768855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 9769586 - 9769627
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||| ||||||||||||||| |||| ||||||||||||||||    
T  9769586 ttttcaaggtgaataagtggggtgtccggggttcgaacccca 9769627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 12553308 - 12553243
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| |||||| |||||||| ||  |||| || |||||||||||| |||| |||||||||||||||    
T  12553308 gtagcctagtggctagaattcacctttttcaaagtgaataagtggggtgtccggggttcgaacccc 12553243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 17350149 - 17350096
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||| |||| ||||||||||||||| | | |||||||||    
T  17350149 ttttaaagtgaataagtggggtgtccggggttcgaaccccggcccctgcatata 17350096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 25421942 - 25421901
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  25421942 ttttaaggtgaataagtggagtgtctggggtttgaaccccag 25421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 41677174 - 41677109
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| |||||| |||||||| ||  |||| ||||||||||||||| |||| ||| |||||||||||    
T  41677174 gtagcctagtggctagaattcacctttttcaaggtgaataagtggggtgtccggagttcgaacccc 41677109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 46116184 - 46116233
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatat 82  Q
    |||||||||||| ||| |||| ||||||||||||||||| | ||||||||    
T  46116184 taaggtgaataattggggtgtccggggttcgaaccccagcccctgcatat 46116233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 7166219 - 7166259
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  7166219 aagtggagtgtccggggttcgaaccccagcccctgcatata 7166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 11405541 - 11405505
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  11405541 taaggtgaataagtggggtgtccggggttcgaacccc 11405505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 15774322 - 15774358
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  15774322 taaggtgaataagtggggtgtccggggttcgaacccc 15774358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 18003899 - 18003851
Alignment:
Q  35 aggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||||||||| |||||||||| ||||||||| | | |||||||||    
T  18003899 aggtgaataagtggggtgttcggggctcgaaccccggcccctgcatata 18003851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 19866592 - 19866540
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgt 53  Q
    |||||||| ||||| |||||||| ||  |||||||||||||||||||| ||||    
T  19866592 caagtagtttagtggctagaattcaccttttttaaggtgaataagtggggtgt 19866540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 22779312 - 22779272
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||||||||||| ||||| ||||||||||||||    
T  22779312 ttttaaaggtgaataagtggggtgtttggggttcgaacccc 22779272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 24168585 - 24168625
Alignment:
Q  29 tttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||| ||||  ||||||||||||||    
T  24168585 tttttaaggtgaataagtggggtgtctggggttcgaacccc 24168625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 34560321 - 34560382
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacc 67  Q
    |||||||||||||||||||| ||   || |||||||||||||||| |||| || ||||||||||    
T  34560321 gtagtctagtgactagaattcacc--ttataaggtgaataagtggggtgtccgaggttcgaacc 34560382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 35283579 - 35283539
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||||| ||||||||||||| | |||||||||||    
T  35283579 aagtggagtgttcagggttcgaaccccggcctctgcatata 35283539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 37733840 - 37733804
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||| |||| |||||||||||||||    
T  37733840 taaggtgaataagtggggtgtccggggttcgaacccc 37733804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 47088887 - 47088847
Alignment:
Q  43 aagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  47088887 aagtggagtgtccggggttcgaaccccagcccctgcatata 47088847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1156 - 1086
Alignment:
Q  1 caagtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||| ||||| |||||||| ||  |||| ||||||||||||||| ||||  ||||||||||||||||    
T  1156 caagtagtttagtggctagaattcacctttttcaaggtgaataagtggggtgtctggggttcgaaccccag 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 17938 - 17991
Alignment:
Q  30 ttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||| |||||||||||||||||  |||||||||||||||| | |||||||||    
T  17938 ttttaaagtgaataagtggagtgtctggggttcgaaccccagcccctgcatata 17991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 108344 - 108421
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    |||||||| || |||||||||||  ||||||| |||||||||||| |||| ||||||| ||||| ||| | |||||||||    
T  108344 gtagtctactggctagaatttac--tttttaaagtgaataagtggggtgtccggggtttgaacctcagcccctgcatata 108421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 4435 - 4372
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    ||||||||||| |||||||| ||   || ||| ||||||||||||||||| |||||||||||||||    
T  4435 gtagtctagtgtctagaattcacc--ttataaagtgaataagtggagtgtccggggttcgaacccc 4372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 166707 - 166648
Alignment:
Q  5 tagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaac 66  Q
    ||||||||||||||||||| ||   || |||| |||||||||||||||| ||||||||||||    
T  166707 tagtctagtgactagaattcacc--ttataagatgaataagtggagtgtccggggttcgaac 166648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 43707 - 43745
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaaccccag 71  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  43707 taaggtgaataagtggggtgttcgaggttcgaaccccag 43745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 8645 - 8608
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccca 70  Q
    |||||||||||||| | |||||||||||||||||||||    
T  8645 taaggtgaataagtagggtgttcggggttcgaacccca 8608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 25106 - 25061
Alignment:
Q  38 tgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||| ||||||||||||||||| | |||||||||    
T  25106 tgaataagtggggtgtccggggttcgaaccccagcccctgcatata 25061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 440513 - 440448
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||| ||||||  ||||||| ||  |||||||||||||||||||| |||||||||  |||||||||    
T  440513 gtagcctagtggttagaattcaccttttttaaggtgaataagtggggtgttcgggagtcgaacccc 440448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 9411 - 9375
Alignment:
Q  33 taaggtgaataagtggagtgttcggggttcgaacccc 69  Q
    |||||||||||||||||||||||||  ||||||||||    
T  9411 taaggtgaataagtggagtgttcggaattcgaacccc 9375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 101943 - 101866
Alignment:
Q  4 gtagtctagtgactagaatttacagtttttaaggtgaataagtggagtgttcggggttcgaaccccaggctctgcatata 83  Q
    ||||||||||| |||||||| ||   || ||||||||||||||||  |||| |||||||||||||| | | |||||||||    
T  101943 gtagtctagtggctagaattcacc--ttataaggtgaataagtgggatgtttggggttcgaaccccggcccctgcatata 101866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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