View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6322_high_8 (Length: 238)
Name: NF6322_high_8
Description: NF6322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6322_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 29960107 - 29960326
Alignment:
| Q |
1 |
tttctttagtactatacaatgcatgcaatgcaaccacgtacgtagtccagaaaatgaatacaaaatatagacaatcatatacatacatatacgtcttact |
100 |
Q |
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| T |
29960107 |
tttctttagtactatagaatgcatgcaatgcaaccacgtacgtagtccagaaaatgaatacaaaatatagacaatcatatatata----tacgtcttact |
29960202 |
T |
|
| Q |
101 |
ttttacaagatgtgaaagtttattattgagacaaatttattggtagaacattccaaacttgttaatttagctcgatataaactctttgtgtttgtaatca |
200 |
Q |
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| T |
29960203 |
ttttacaagatgtgaaagtttattattgagacaaatttattggtagaacattccaaacttgttaatttagctcgatataaactcttggtgtttgtaatca |
29960302 |
T |
|
| Q |
201 |
tgaat-atactttaattaatattt |
223 |
Q |
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||||| |||||||||||||||||| |
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| T |
29960303 |
tgaataatactttaattaatattt |
29960326 |
T |
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