View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6322_low_7 (Length: 251)
Name: NF6322_low_7
Description: NF6322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6322_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 78 - 251
Target Start/End: Original strand, 46958990 - 46959162
Alignment:
| Q |
78 |
agggtagaatacacctttgtatagtgagtgatccaaggtaactaatctaacaaacttccacctaatccataactaacttctaattgccttaaaccaacat |
177 |
Q |
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| T |
46958990 |
agggtagaatacacctttgtatagtgagtgatccaaggtaactaatctaacaaacttccacctaat-cataactaacttctaattgccttaaaccaacat |
46959088 |
T |
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| Q |
178 |
ctaacatgaagggttcatctactcattccatcccattgtcattacaaatcataattaatatcaggatttgtctc |
251 |
Q |
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| T |
46959089 |
ctaacatgaagggttcatctgtacagaatatcccattgtcattacaaatcataattaatatcaggatttgtctc |
46959162 |
T |
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