View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6323_high_1 (Length: 368)
Name: NF6323_high_1
Description: NF6323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6323_high_1 |
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Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 360
Target Start/End: Complemental strand, 12940225 - 12939866
Alignment:
| Q |
1 |
atattcagattcacttgatcgacgatacttaagaatcataatgtgtcggcttgattacaaaaactctccacttatcaatatcaacatttaaaactactcg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12940225 |
atattcagattcacttgatcgacgatacttaagaatcataatgtgttggcttgattacaaaaactctccacttatcaatatcaacatttaaaactactcg |
12940126 |
T |
|
| Q |
101 |
aagccttgcaggacacttagtttgagtgatcagcctcgaattaatatcttgactctttcttcttatttttactctcaccctctctattacatattaatcg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12940125 |
aagccttgcaggacacttagtttgagtgatcagcctcaaattaatatcttgattgtttcttcttatttttactctcaccctctctattacatattaatcg |
12940026 |
T |
|
| Q |
201 |
acaaacaactatattcccatcagaatctttgtttacatcatcttttcttatcacgaacccatgaaattcttcatagatatcataatattgtgtctctttt |
300 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
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| T |
12940025 |
acaagcaactatattcccatcagaatctttgtttacatcatcttttcttatcacgaacccatgaaattcttcatagatgtcataatattgtgtttctttt |
12939926 |
T |
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| Q |
301 |
tcctccgaattaaacctcagtccttttatatcatcaaacgtcaattttctaattttcttg |
360 |
Q |
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||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
12939925 |
tcctctgaatcaaacctcagtcctcttatatcatcaaacgtcaattttctaattttcttg |
12939866 |
T |
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