View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6323_high_2 (Length: 344)
Name: NF6323_high_2
Description: NF6323
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6323_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 7 - 334
Target Start/End: Original strand, 786187 - 786510
Alignment:
| Q |
7 |
ggttggcctctcaagacatgagtccacacaatatcatcatagatagatattatggacagcatatacaaactcacatggtgttctatggaaagttagaaca |
106 |
Q |
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| T |
786187 |
ggttggcctctcaagacatgagtccacacaatatcatcatag----atattatggacagcatatacaaactcacatggtgttctatggaaagttagaaca |
786282 |
T |
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| Q |
107 |
cttgataagttagcaccaaatcatataacattgtaccaaatttagtatgtaacaacaaattaaaggcattcaaaaatacgataatcaattctggtttatg |
206 |
Q |
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| T |
786283 |
cttgataagttagcaccaaatcatataacattgtaccaaatttagtatgtaacaacaaattaaaggcattcaaaaatacgataatcaattctggtttatg |
786382 |
T |
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| Q |
207 |
acttttttattgataaaagagggtcaatgactcaattttaaacttagtttttcgtcgaaagtatagcccaaactcttgacatatgcaatcctcaaccgat |
306 |
Q |
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| T |
786383 |
acttttttattgataaaagagggtcaatgactcaattttaaacttagtttttcgtcgaaagtatagcccaaactcttgacatatgcaatcctcaaccgat |
786482 |
T |
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| Q |
307 |
taccgatttaagtagcgatcctcttcat |
334 |
Q |
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| T |
786483 |
taccgatttaagtagcgatcctcttcat |
786510 |
T |
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