View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6325_high_11 (Length: 251)
Name: NF6325_high_11
Description: NF6325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6325_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 14442517 - 14442750
Alignment:
| Q |
1 |
tgtcgaatttgggtttttattcaatatattttgaaaaaatagtccaaacatgtttgagagaagcttatccaaatcataaaactcccgaaaggtcataaaa |
100 |
Q |
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| T |
14442517 |
tgtcgaatttgggtttttattcaatatattttgaaaaaatagtccaaaaatgtttgagagaagcttatccaaatcataaaactcccgaaaggtcataaaa |
14442616 |
T |
|
| Q |
101 |
agcaaaacctgcctttctttcattttaccccttgatcattctgaccaatcgtaactagaattttttatattgtttttcaatggcaaagaaagagtaacgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14442617 |
agcaaaacctgcctttctttcattttaccccttgatcattctgaccaatcgtaactagaattttttatattgtttttcaatggcaaagaaagagtaacgt |
14442716 |
T |
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| Q |
201 |
agtta---attattaattaaaatcattattatta |
231 |
Q |
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||||| |||||||||||||||||||||||||| |
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| T |
14442717 |
agttaattattattaattaaaatcattattatta |
14442750 |
T |
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