View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6325_low_17 (Length: 222)
Name: NF6325_low_17
Description: NF6325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6325_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 33096742 - 33096938
Alignment:
| Q |
17 |
aaatattactggctgcattttaattataacatgcctttgtgtatctcatattgttttaaactttatggcatacatgccaacaattctagtagatacacac |
116 |
Q |
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| T |
33096742 |
aaatattactggctgcattttaattataacatgcctttgtgtatctcatattgttttaaactttatg-catacatgccaacaattctagtagatacacac |
33096840 |
T |
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| Q |
117 |
ataacacgtttaaaattttatcacctcttgaattgtatcacttattaaagaaatcaatttaattttatgccaaggtttcattgttttttcttcttctc |
214 |
Q |
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| T |
33096841 |
ataacacatttaaaattttatcacctcttgaattgtatcacttattaaagaaatcaatgtaattttatgccaaggtttcattgttttttcttcttctc |
33096938 |
T |
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