View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6327_low_14 (Length: 340)
Name: NF6327_low_14
Description: NF6327
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6327_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 13 - 323
Target Start/End: Complemental strand, 2937654 - 2937340
Alignment:
| Q |
13 |
aatatcttattgattcaatgttcaattcaattttaaaatattttttgagagtaccgaaatgatttctttaaacaccacccatagaggggtccataa---- |
108 |
Q |
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| T |
2937654 |
aatatcttattgattcaatgttgaattcaattttaaaatattttttgagagtaccgaaatgatttctttaaacaccacccatagaggggtccataactaa |
2937555 |
T |
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| Q |
109 |
gaaactacaatcaaaataaaaacgaaataatgattataactttaaatatcggtgtgttaatatgttatacttagagaggaaccaacactattgcactaat |
208 |
Q |
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| T |
2937554 |
gaaactacaatcaaaataaaaacgaaataatgattataactttaaatctcggtgtgttaatatgttatacttagagaggaaccaacactattgtactaat |
2937455 |
T |
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| Q |
209 |
ctatttagagttagatttgaaccaccacatacatagttacatacatcaactcaaaagttgaaactttcatagtggtaatagtgaggtccattgaagtgaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2937454 |
ctatttagagttagatttgaaccaccacatacatagttacatacatcaactcaaaagttgaaactttcatagtggtaatagtgaggtccattgaagtgaa |
2937355 |
T |
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| Q |
309 |
gaactatcctagtta |
323 |
Q |
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||||||||||||||| |
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| T |
2937354 |
gaactatcctagtta |
2937340 |
T |
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