View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6328_high_14 (Length: 380)

Name: NF6328_high_14
Description: NF6328
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6328_high_14
NF6328_high_14
[»] chr1 (29 HSPs)
chr1 (17-249)||(44690519-44690755)
chr1 (317-373)||(44690825-44690881)
chr1 (315-370)||(52064379-52064434)
chr1 (315-373)||(18404654-18404711)
chr1 (332-373)||(27523255-27523296)
chr1 (317-373)||(19722903-19722958)
chr1 (315-373)||(20304932-20304989)
chr1 (315-373)||(25973613-25973670)
chr1 (315-373)||(32000068-32000125)
chr1 (315-373)||(33786433-33786490)
chr1 (315-373)||(33786635-33786692)
chr1 (315-373)||(37821636-37821693)
chr1 (315-373)||(40215194-40215251)
chr1 (336-373)||(10167428-10167465)
chr1 (315-371)||(32000269-32000325)
chr1 (315-373)||(3559624-3559682)
chr1 (315-373)||(3559823-3559880)
chr1 (315-373)||(16045798-16045856)
chr1 (315-373)||(18404449-18404507)
chr1 (315-373)||(25463683-25463741)
chr1 (315-373)||(25463882-25463939)
chr1 (315-373)||(40214995-40215053)
chr1 (315-373)||(40273709-40273767)
chr1 (315-373)||(40273914-40273971)
chr1 (315-373)||(44094903-44094960)
chr1 (315-373)||(51737711-51737768)
chr1 (69-126)||(42164979-42165036)
chr1 (317-373)||(9910095-9910150)
chr1 (320-356)||(27523062-27523098)
[»] chr6 (23 HSPs)
chr6 (315-372)||(29693652-29693709)
chr6 (315-373)||(8515725-8515783)
chr6 (315-373)||(17705271-17705328)
chr6 (315-373)||(17705465-17705523)
chr6 (315-373)||(28675354-28675411)
chr6 (315-373)||(33696903-33696960)
chr6 (315-373)||(34238889-34238946)
chr6 (315-373)||(6127282-6127340)
chr6 (315-373)||(23291084-23291142)
chr6 (315-372)||(32702412-32702468)
chr6 (315-362)||(17175823-17175869)
chr6 (315-373)||(2309225-2309282)
chr6 (319-373)||(6031546-6031599)
chr6 (315-373)||(6031741-6031799)
chr6 (315-373)||(11548391-11548448)
chr6 (315-373)||(17176021-17176079)
chr6 (315-373)||(33695128-33695185)
chr6 (315-373)||(33695327-33695385)
chr6 (315-373)||(33696703-33696761)
chr6 (317-358)||(582531-582572)
chr6 (317-362)||(2121013-2121058)
chr6 (315-372)||(23290883-23290939)
chr6 (336-373)||(29693478-29693515)
[»] chr4 (35 HSPs)
chr4 (317-373)||(37219837-37219893)
chr4 (315-372)||(17655637-17655694)
chr4 (317-373)||(42671874-42671930)
chr4 (315-373)||(11314053-11314111)
chr4 (315-373)||(25063376-25063434)
chr4 (315-373)||(21802122-21802179)
chr4 (315-373)||(42671676-42671734)
chr4 (315-372)||(24128446-24128502)
chr4 (315-372)||(36073263-36073320)
chr4 (321-373)||(36073743-36073795)
chr4 (318-373)||(23964269-23964323)
chr4 (315-373)||(7745112-7745170)
chr4 (315-373)||(10442589-10442646)
chr4 (315-373)||(33530688-33530746)
chr4 (315-373)||(44893015-44893072)
chr4 (315-373)||(44893632-44893689)
chr4 (317-373)||(50156383-50156438)
chr4 (315-373)||(9089076-9089133)
chr4 (315-373)||(10442789-10442847)
chr4 (315-373)||(22199268-22199326)
chr4 (315-373)||(22199465-22199522)
chr4 (315-373)||(24392674-24392732)
chr4 (315-361)||(24392892-24392937)
chr4 (315-373)||(31078819-31078877)
chr4 (315-373)||(36073555-36073612)
chr4 (315-373)||(46442050-46442107)
chr4 (315-373)||(49387888-49387946)
chr4 (315-373)||(53123237-53123294)
chr4 (320-373)||(23964465-23964518)
chr4 (336-373)||(30563415-30563452)
chr4 (315-371)||(4751655-4751710)
chr4 (317-361)||(7744916-7744959)
chr4 (315-371)||(36072954-36073010)
chr4 (315-371)||(36073159-36073214)
chr4 (317-349)||(53998988-53999020)
[»] chr8 (41 HSPs)
chr8 (317-371)||(30834859-30834913)
chr8 (317-373)||(24844664-24844720)
chr8 (315-373)||(3890416-3890474)
chr8 (315-373)||(37132482-37132540)
chr8 (315-373)||(32064952-32065009)
chr8 (315-377)||(38017135-38017196)
chr8 (320-371)||(1886621-1886672)
chr8 (315-373)||(6108035-6108092)
chr8 (315-373)||(10044554-10044611)
chr8 (315-373)||(20091603-20091660)
chr8 (315-373)||(30055722-30055779)
chr8 (315-373)||(31347578-31347635)
chr8 (315-373)||(32393865-32393923)
chr8 (315-373)||(34665587-34665644)
chr8 (315-373)||(37132658-37132716)
chr8 (315-373)||(37985858-37985915)
chr8 (336-373)||(15972877-15972914)
chr8 (315-362)||(42754844-42754890)
chr8 (315-373)||(1503645-1503702)
chr8 (315-373)||(1645965-1646023)
chr8 (315-373)||(3596843-3596900)
chr8 (315-361)||(7017660-7017705)
chr8 (315-373)||(7022185-7022242)
chr8 (315-373)||(14128871-14128929)
chr8 (315-373)||(14129065-14129122)
chr8 (315-373)||(17841652-17841709)
chr8 (315-373)||(24211174-24211231)
chr8 (315-373)||(25581041-25581098)
chr8 (315-373)||(26041915-26041972)
chr8 (331-373)||(26042116-26042158)
chr8 (315-373)||(27782117-27782175)
chr8 (315-373)||(32064752-32064810)
chr8 (315-373)||(34665389-34665447)
chr8 (315-373)||(35353048-35353106)
chr8 (315-373)||(37986055-37986113)
chr8 (319-373)||(39772608-39772661)
chr8 (315-373)||(40779931-40779988)
chr8 (320-373)||(38016983-38017036)
chr8 (336-373)||(41819590-41819627)
chr8 (320-373)||(41819778-41819831)
chr8 (320-373)||(42755042-42755095)
[»] chr3 (40 HSPs)
chr3 (315-373)||(40328037-40328095)
chr3 (315-373)||(36864834-36864892)
chr3 (320-373)||(33839741-33839794)
chr3 (317-373)||(47738317-47738373)
chr3 (315-373)||(8320384-8320441)
chr3 (315-373)||(33145918-33145975)
chr3 (317-373)||(26612952-26613008)
chr3 (317-373)||(46919100-46919156)
chr3 (315-362)||(42921342-42921389)
chr3 (315-373)||(2754724-2754782)
chr3 (315-373)||(2754925-2754982)
chr3 (315-373)||(3089625-3089682)
chr3 (315-365)||(3456278-3456327)
chr3 (315-373)||(3574328-3574385)
chr3 (315-373)||(3574527-3574585)
chr3 (315-373)||(6041891-6041949)
chr3 (315-373)||(8361841-8361898)
chr3 (315-373)||(9796831-9796888)
chr3 (315-373)||(19650702-19650759)
chr3 (315-373)||(22426147-22426204)
chr3 (317-363)||(24343765-24343811)
chr3 (315-373)||(33114000-33114057)
chr3 (315-373)||(37217053-37217111)
chr3 (315-373)||(37522259-37522316)
chr3 (315-372)||(11347275-11347332)
chr3 (320-373)||(37522065-37522118)
chr3 (315-362)||(37216855-37216901)
chr3 (315-373)||(42297360-42297419)
chr3 (315-373)||(3137216-3137273)
chr3 (315-373)||(3456071-3456129)
chr3 (315-373)||(6042083-6042140)
chr3 (331-373)||(19650900-19650942)
chr3 (315-373)||(30385606-30385663)
chr3 (331-373)||(33839554-33839596)
chr3 (315-373)||(34482690-34482747)
chr3 (315-373)||(41224440-41224497)
chr3 (315-373)||(48160912-48160970)
chr3 (320-373)||(9797029-9797082)
chr3 (320-369)||(42921155-42921204)
chr3 (320-372)||(47738117-47738169)
[»] chr2 (21 HSPs)
chr2 (315-373)||(22592918-22592976)
chr2 (317-373)||(9723612-9723668)
chr2 (315-373)||(9293377-9293434)
chr2 (331-373)||(9723428-9723470)
chr2 (315-371)||(31174637-31174692)
chr2 (315-373)||(10661894-10661952)
chr2 (315-373)||(10662094-10662151)
chr2 (315-373)||(14941366-14941424)
chr2 (315-373)||(23267864-23267921)
chr2 (331-373)||(27847655-27847697)
chr2 (315-373)||(35160764-35160822)
chr2 (315-372)||(3989283-3989339)
chr2 (329-365)||(37335858-37335894)
chr2 (315-362)||(43331129-43331175)
chr2 (315-373)||(7475310-7475367)
chr2 (315-373)||(9293576-9293634)
chr2 (315-373)||(13355054-13355111)
chr2 (315-373)||(21393488-21393544)
chr2 (315-373)||(33380413-33380470)
chr2 (315-373)||(35160965-35161022)
chr2 (337-373)||(16767285-16767321)
[»] chr7 (28 HSPs)
chr7 (317-373)||(29737350-29737406)
chr7 (315-374)||(36790278-36790337)
chr7 (315-373)||(3961986-3962044)
chr7 (317-373)||(20009902-20009958)
chr7 (315-362)||(18037194-18037240)
chr7 (315-373)||(15238590-15238647)
chr7 (315-373)||(15329280-15329338)
chr7 (315-373)||(37476882-37476939)
chr7 (315-373)||(37477080-37477138)
chr7 (315-373)||(42612017-42612074)
chr7 (315-373)||(48880927-48880985)
chr7 (320-373)||(18036990-18037043)
chr7 (315-372)||(36790467-36790524)
chr7 (317-362)||(42696300-42696345)
chr7 (315-371)||(24394979-24395035)
chr7 (317-373)||(34483044-34483099)
chr7 (315-373)||(4974537-4974594)
chr7 (315-373)||(4974735-4974793)
chr7 (315-373)||(15577649-15577706)
chr7 (315-373)||(15577850-15577908)
chr7 (315-373)||(24395177-24395234)
chr7 (315-373)||(25167658-25167715)
chr7 (315-373)||(34482842-34482900)
chr7 (315-373)||(35445603-35445660)
chr7 (315-373)||(42611818-42611876)
chr7 (315-373)||(45637719-45637777)
chr7 (315-373)||(45637917-45637974)
chr7 (315-373)||(48880729-48880786)
[»] chr5 (24 HSPs)
chr5 (315-373)||(12614539-12614597)
chr5 (315-371)||(3362987-3363042)
chr5 (315-373)||(2477643-2477701)
chr5 (315-373)||(3521809-3521866)
chr5 (315-373)||(6043314-6043371)
chr5 (315-373)||(8145579-8145636)
chr5 (315-373)||(11361131-11361189)
chr5 (315-373)||(12614733-12614791)
chr5 (315-373)||(17545484-17545541)
chr5 (315-373)||(22912859-22912916)
chr5 (328-373)||(27482029-27482074)
chr5 (315-362)||(2477853-2477899)
chr5 (315-373)||(4892209-4892267)
chr5 (315-373)||(4892408-4892465)
chr5 (315-373)||(14138873-14138930)
chr5 (315-373)||(22913054-22913112)
chr5 (315-373)||(25398245-25398303)
chr5 (315-373)||(33584131-33584188)
chr5 (315-373)||(33584329-33584387)
chr5 (331-373)||(37321793-37321835)
chr5 (320-373)||(8145387-8145440)
chr5 (336-373)||(31640763-31640800)
chr5 (315-371)||(12851010-12851065)
chr5 (315-371)||(38899527-38899583)
[»] scaffold0471 (1 HSPs)
scaffold0471 (315-372)||(13049-13105)
[»] scaffold0178 (2 HSPs)
scaffold0178 (315-373)||(11628-11686)
scaffold0178 (317-373)||(11827-11882)
[»] scaffold0665 (1 HSPs)
scaffold0665 (315-373)||(3075-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (315-373)||(16190-16247)
scaffold0228 (315-373)||(26142-26199)
scaffold0228 (320-373)||(8414-8467)
scaffold0228 (320-373)||(15996-16049)
scaffold0228 (320-373)||(25948-26001)
[»] scaffold0204 (2 HSPs)
scaffold0204 (315-373)||(4403-4461)
scaffold0204 (315-373)||(4602-4659)
[»] scaffold0085 (2 HSPs)
scaffold0085 (315-361)||(48067-48112)
scaffold0085 (321-373)||(47863-47915)
[»] scaffold0053 (1 HSPs)
scaffold0053 (190-231)||(11512-11553)


Alignment Details
Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 44690519 - 44690755
Alignment:
Q  17 atgactatcttcaattaatatgaatgacttgctctggtcatcttgtttttggtaatcatgacaattttaaagattctcttgttggtttgctgaatctttt 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44690519 atgactatcttcaattaatatgaatgacttgctctagtcatcttgtttttggtaatcatgacaattttaaagattctcttgttggtttgctgaatctttt 44690618  T
Q  117 agtttggtctagaannnnnnngacacatactttggttatgtattaaaacca----nnnnnnnnaaagacaaaaatgtattatattaccacaaaccaataa 212  Q
    |||||||||| | |       ||||||||||||||||||||||||||||||            |||| |||||||||||||||||| |||||| ||||||    
T  44690619 agtttggtcttgtatttttttgacacatactttggttatgtattaaaaccatttttttttttaaaaggcaaaaatgtattatattatcacaaatcaataa 44690718  T
Q  213 gtcctcctccacaaggtgtaagttatggaactcacgg 249  Q
    |||||||||||||||||||||| ||||||||||||||    
T  44690719 gtcctcctccacaaggtgtaagatatggaactcacgg 44690755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 44690825 - 44690881
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  44690825 tagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 315 - 370
Target Start/End: Original strand, 52064379 - 52064434
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaata 370  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  52064379 gctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 18404711 - 18404654
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||    
T  18404711 gctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 18404654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 373
Target Start/End: Complemental strand, 27523296 - 27523255
Alignment:
Q  332 attttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  27523296 attttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 19722903 - 19722958
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  19722903 tagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 19722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 20304932 - 20304989
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  20304932 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 25973670 - 25973613
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  25973670 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 32000068 - 32000125
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  32000068 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 33786433 - 33786490
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  33786433 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33786692 - 33786635
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  33786692 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 37821636 - 37821693
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  37821636 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 40215251 - 40215194
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  40215251 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 10167428 - 10167465
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||||||||||||||| |||||||||    
T  10167428 tatcaagaaagatttaagaatgacatgatagaataatc 10167465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 32000325 - 32000269
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||| ||||||| || |||||| |||||||| ||| |||||||||||||||||||||    
T  32000325 gctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3559624 - 3559682
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||| |||  ||||||||||||||| ||||||||||    
T  3559624 gctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 3559880 - 3559823
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||| |||||| |||||||    
T  3559880 gctagatatcaagaatgattttat-aagaaagatccaagaatgatatgacacaataatc 3559823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 16045856 - 16045798
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  16045856 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 18404449 - 18404507
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  |||||||||||||||  |||||||||    
T  18404449 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 25463683 - 25463741
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||| ||||||  ||||||||||||||| ||||||||||    
T  25463683 gctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 25463939 - 25463882
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  25463939 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatc 25463882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 40214995 - 40215053
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  40214995 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 40273709 - 40273767
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| || |||||| |||||||| ||| |||||||||||| || |||||||    
T  40273709 gctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 40273971 - 40273914
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||| ||| |||||||||||| || |||||||    
T  40273971 gctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 44094960 - 44094903
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||| ||||||| |||||||||  ||||||||||||||| |||||||    
T  44094960 gctagatatcaagaattattttat-aagaaagatccaagaatgacatgacacaataatc 44094903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 51737768 - 51737711
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  51737768 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 42165036 - 42164979
Alignment:
Q  69 taatcatgacaattttaaagattctcttgttggtttgctgaatcttttagtttggtct 126  Q
    |||||| |||||| |||||| ||||||||||| ||||| ||| ||||| |||||||||    
T  42165036 taatcaagacaatcttaaaggttctcttgttgatttgccgaagcttttggtttggtct 42164979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 9910095 - 9910150
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  9910095 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 27523062 - 27523098
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaat 356  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  27523062 atatcaagaatgattttatcaagaaagattcaagaat 27523098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 29693709 - 29693652
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  29693709 gctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 8515783 - 8515725
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||||| |||||||||||||||||| ||||||||||    
T  8515783 gctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 17705271 - 17705328
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  17705271 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 17705328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 17705523 - 17705465
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||||||||||||||    
T  17705523 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 28675411 - 28675354
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  28675411 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 28675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33696960 - 33696903
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||    
T  33696960 gctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 33696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 34238889 - 34238946
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||||||| |||||||    
T  34238889 gctagatatcaagaatgattttatcaag-aagattcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 6127282 - 6127340
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  6127282 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 23291142 - 23291084
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  23291142 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 32702468 - 32702412
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||| ||||||    
T  32702468 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 17175823 - 17175869
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  17175823 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatg 17175869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 2309225 - 2309282
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||||  |||||||||| |||||||||| |||||||||||| || |||||||    
T  2309225 gctagatatcaacgatgattttat-aagaaagattcaagaatgacatggcacaataatc 2309282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 6031546 - 6031599
Alignment:
Q  319 gatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||| ||||||||||| || |||||||||||||||||||| || |||||||    
T  6031546 gatatcaagaatgattttataaa-aaagatttaagaatgacatggcacaataatc 6031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 6031799 - 6031741
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||| ||||| |||  ||||||||||||||||||||||||||    
T  6031799 gctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 11548391 - 11548448
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| |||||||| |||| |||||||||||| || |||||||    
T  11548391 gctagatatcaagaatgattt-atcaagaacgattcaagaatgacatggcacaataatc 11548448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 17176079 - 17176021
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||| |||  || |||||||||||||||||||||||    
T  17176079 gctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 33695128 - 33695185
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| ||| || |||||||    
T  33695128 gctagatatcaagaatgattttat-aagaaatatttaagaatgatatgtcacaataatc 33695185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33695385 - 33695327
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  33695385 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 33696703 - 33696761
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  33696703 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 358
Target Start/End: Original strand, 582531 - 582572
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatga 358  Q
    |||||||||| ||||||||||| |||||| ||||||||||||    
T  582531 tagatatcaagaatgattttattaagaaaaatttaagaatga 582572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 2121013 - 2121058
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||| ||||||||||| || ||||||| ||||||||||||    
T  2121013 tagatatcaaaaatgattttataaaaaaagattcaagaatgacatg 2121058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 23290883 - 23290939
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||| |||||||||| |||||||| ||| || ||||||    
T  23290883 gctagatatcaaaaatgattttat-aagaaagattcaagaatgatatggcacaataat 23290939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 29693478 - 29693515
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  29693478 tatcaagaaatattcaagaatgacatgacagaataatc 29693515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 37219893 - 37219837
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37219893 tagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 17655694 - 17655637
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||    
T  17655694 gctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 42671930 - 42671874
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  42671930 tagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 11314053 - 11314111
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  11314053 gctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 25063376 - 25063434
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||    
T  25063376 gctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 21802122 - 21802179
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  21802122 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 21802179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 42671676 - 42671734
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| |||||||||| ||||||||||| ||| |||||||||||||||| ||||||||||    
T  42671676 gctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 24128502 - 24128446
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  24128502 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 36073263 - 36073320
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    ||||||||  || ||||||||||||||||||||||||||||||| ||| |||||||||    
T  36073263 gctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataat 36073320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 373
Target Start/End: Complemental strand, 36073795 - 36073743
Alignment:
Q  321 tatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||| || |||||||| |||||||||||||||||||||||||| |||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 373
Target Start/End: Original strand, 23964269 - 23964323
Alignment:
Q  318 agatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||    
T  23964269 agatatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatc 23964323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 7745170 - 7745112
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  7745170 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 10442589 - 10442646
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  10442589 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33530746 - 33530688
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||||||| ||| |||||||||||| ||||||||||    
T  33530746 gctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 44893015 - 44893072
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  44893015 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 44893689 - 44893632
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  44893689 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 50156383 - 50156438
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  50156383 tagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatc 50156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 9089133 - 9089076
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  9089133 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 10442847 - 10442789
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  10442847 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 22199268 - 22199326
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  22199268 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 22199522 - 22199465
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  22199522 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatc 22199465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 24392674 - 24392732
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| |||||||| ||| |||||||||||| ||||||||||    
T  24392674 gctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 24392937 - 24392892
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacat 361  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||    
T  24392937 gctagatatcaagaatgattt-atcaagaaatatttaagaatgacat 24392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 31078877 - 31078819
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  31078877 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 36073612 - 36073555
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  36073612 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 46442107 - 46442050
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  46442107 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 49387946 - 49387888
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  49387946 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 53123294 - 53123237
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  53123294 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 23964518 - 23964465
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || ||||||||||| |||  ||||||||||||||| ||||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 30563452 - 30563415
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  30563452 tatcaagaaagattcaagaatgacatgacacaataatc 30563415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 4751710 - 4751655
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||| || |||||    
T  4751710 gctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataa 4751655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 7744916 - 7744959
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacat 361  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||    
T  7744916 tagatatcaagaatgattttat-aagaaagattcaagaatgacat 7744959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 36072954 - 36073010
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||    
T  36072954 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 36073214 - 36073159
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||    
T  36073214 gctagatatcaaaaatgattttat-aagaaaaattcaagaatgacatggcacaataa 36073159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 349
Target Start/End: Original strand, 53998988 - 53999020
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatt 349  Q
    |||||||||| ||||||||||||||||||||||    
T  53998988 tagatatcaagaatgattttatcaagaaagatt 53999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 317 - 371
Target Start/End: Original strand, 30834859 - 30834913
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  30834859 tagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataa 30834913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 24844664 - 24844720
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||    
T  24844664 tagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatc 24844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3890416 - 3890474
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||||||    
T  3890416 gctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 37132482 - 37132540
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||    
T  37132482 gctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 32065009 - 32064952
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||    
T  32065009 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 377
Target Start/End: Complemental strand, 38017196 - 38017135
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatctacc 377  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||| ||||    
T  38017196 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacc 38017135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 371
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    ||||||| |||||||||||||||||||||| ||||||||| || ||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 6108035 - 6108092
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  6108035 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 10044611 - 10044554
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  10044611 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 20091603 - 20091660
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  20091603 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 30055779 - 30055722
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||| || ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  30055779 gctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 30055722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 31347578 - 31347635
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  31347578 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 32393865 - 32393923
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  32393865 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 34665644 - 34665587
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  34665644 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 37132716 - 37132658
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| ||  |||||||||||||| |||||||||||||||| ||||||||||    
T  37132716 gctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 37985858 - 37985915
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  37985858 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 15972914 - 15972877
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15972914 tatcaagaaagattgaagaatgacatgacagaataatc 15972877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 42754844 - 42754890
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  42754844 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatg 42754890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 1503645 - 1503702
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  1503645 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 1646023 - 1645965
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  |||||||| |||||| ||||||||||    
T  1646023 gctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3596843 - 3596900
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| ||| || |||||||    
T  3596843 gctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 361
Target Start/End: Original strand, 7017660 - 7017705
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacat 361  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||    
T  7017660 gctagatatcaagaatgattt-atcaagaaatatttaagaatgacat 7017705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 7022242 - 7022185
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||| | || |||||||    
T  7022242 gctagatatcaacaatgattt-atcaagaaagattcaagaatgacaagtcacaataatc 7022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 14128871 - 14128929
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||| |||  ||||||||||||||| ||||||||||    
T  14128871 gctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 14129122 - 14129065
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  14129122 gctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 17841652 - 17841709
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  17841652 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 24211174 - 24211231
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  24211174 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatc 24211231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 25581041 - 25581098
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||| ||| |||||||    
T  25581041 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatc 25581098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 26041915 - 26041972
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  26041915 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 26042158 - 26042116
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||  || |||||||||||||||||||||||    
T  26042158 gattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 27782175 - 27782117
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| ||  |||||||||||||||||| || ||||||||| ||||||||||    
T  27782175 gctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 32064752 - 32064810
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  32064752 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 34665389 - 34665447
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  34665389 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 35353048 - 35353106
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||||||    
T  35353048 gctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 37986113 - 37986055
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||| |||  ||||||||||||||| ||||||||||    
T  37986113 gctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 373
Target Start/End: Original strand, 39772608 - 39772661
Alignment:
Q  319 gatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||| ||||||||||| |||||||||  ||||||||||||||| |||||||    
T  39772608 gatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 39772661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 40779931 - 40779988
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  40779931 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 38016983 - 38017036
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 41819590 - 41819627
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| ||||||||||||||| |||||||    
T  41819590 tatcaagaaagattcaagaatgacatgacacaataatc 41819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 41819831 - 41819778
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||| | ||||||||||| ||| ||||||||||    
T  41819831 atatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 42755095 - 42755042
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 9e-18; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 40328095 - 40328037
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  40328095 gctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 36864834 - 36864892
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||||    
T  36864834 gctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 33839794 - 33839741
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 47738373 - 47738317
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| || |||||||    
T  47738373 tagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 8320384 - 8320441
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||    
T  8320384 gctagatatcaataatgattttat-aagaaagattcaagaatgacatggcacaataatc 8320441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33145975 - 33145918
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  33145975 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 33145918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 26613008 - 26612952
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| || |||||||    
T  26613008 tagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatc 26612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 46919156 - 46919100
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| |||||||||||||| ||||||| || ||||||||| ||||||||||    
T  46919156 tagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 42921389 - 42921342
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||    
T  42921389 gctagatattaagaatgattttatcaagaaatatttaagaatgacatg 42921342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 2754724 - 2754782
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  2754724 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 2754982 - 2754925
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||| || |||||||    
T  2754982 gctagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatc 2754925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 3089682 - 3089625
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||    
T  3089682 gctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatc 3089625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 365
Target Start/End: Complemental strand, 3456327 - 3456278
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgaca 365  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||||||    
T  3456327 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgaca 3456278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3574328 - 3574385
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||||| |||||||    
T  3574328 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 3574385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 3574585 - 3574527
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  3574585 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 6041891 - 6041949
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  6041891 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 8361841 - 8361898
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||||    
T  8361841 gctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatc 8361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 9796831 - 9796888
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  9796831 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatc 9796888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 19650702 - 19650759
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||||| |||||||    
T  19650702 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatc 19650759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 22426147 - 22426204
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  22426147 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 24343811 - 24343765
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatga 363  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||    
T  24343811 tagatatcaagaatgattttatcaaaaaagattcaagaatgacatga 24343765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33114057 - 33114000
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  33114057 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 37217111 - 37217053
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  37217111 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 37522316 - 37522259
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  37522316 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 372
Target Start/End: Original strand, 11347275 - 11347332
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| |||||||||    
T  11347275 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 37522065 - 37522118
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||| ||||||||  ||||||||||||||||||||||||||    
T  37522065 atatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 37216855 - 37216901
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  37216855 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatg 37216901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 42297360 - 42297419
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgac-agaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||||| |||||||||    
T  42297360 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatc 42297419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3137216 - 3137273
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  3137216 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3456071 - 3456129
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||| ||| ||||||||||    
T  3456071 gctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 6042140 - 6042083
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  6042140 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatc 6042083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 19650942 - 19650900
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  19650942 gattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 30385663 - 30385606
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  30385663 gctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 33839554 - 33839596
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||    
T  33839554 gattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 34482690 - 34482747
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  34482690 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 41224497 - 41224440
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||| ||| |||||||||||| || |||||||    
T  41224497 gctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 48160912 - 48160970
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||| ||| ||||||||||    
T  48160912 gctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Complemental strand, 9797082 - 9797029
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||| |||||||| ||| |||||||||||| ||||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 42921155 - 42921204
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaat 369  Q
    ||||||| || |||||||||||||||  ||||||||||||||||| ||||    
T  42921155 atatcaagaaagattttatcaagaaaattttaagaatgacatgaccgaat 42921204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    ||||||| || ||||||||||||||| ||| |||||||| ||| |||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 22592976 - 22592918
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||    
T  22592976 gctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 9723668 - 9723612
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  9723668 tagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 9293377 - 9293434
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||    
T  9293377 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatc 9293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 9723428 - 9723470
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  9723428 gattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 31174637 - 31174692
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||    
T  31174637 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataa 31174692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 10661894 - 10661952
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  10661894 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 10662151 - 10662094
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||    
T  10662151 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 10662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 14941424 - 14941366
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||| |||||||||| |||||||||||| ||||||||||    
T  14941424 gctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 23267864 - 23267921
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  23267864 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 27847655 - 27847697
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  27847655 gattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 35160764 - 35160822
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  35160764 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 3989339 - 3989283
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||| |||||||||  ||||||||||||||| ||||||    
T  3989339 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataat 3989283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 37335894 - 37335858
Alignment:
Q  329 atgattttatcaagaaagatttaagaatgacatgaca 365  Q
    |||||||||||||||||||||||| ||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgaca 37335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 43331175 - 43331129
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  43331175 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatg 43331129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 7475310 - 7475367
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||| |||||| |||||||    
T  7475310 gctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatc 7475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 9293634 - 9293576
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  9293634 gctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 13355111 - 13355054
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  13355111 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatc 13355054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 21393488 - 21393544
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||| ||| ||||||||||||||| |||||||    
T  21393488 gctagatatcaagaatgattt-atcaagaaa-attcaagaatgacatgacacaataatc 21393544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33380470 - 33380413
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  33380470 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 35161022 - 35160965
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  35161022 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 16767285 - 16767321
Alignment:
Q  337 atcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  16767285 atcaagaaagattcaagaatgacatgacacaataatc 16767321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 29737406 - 29737350
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatc 29737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Original strand, 36790278 - 36790337
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatct 374  Q
    |||| |||||||||||| ||||||||| ||||||| ||||||||||||||| ||||||||    
T  36790278 gctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatct 36790337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3961986 - 3962044
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||||||||||||||    
T  3961986 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 373
Target Start/End: Original strand, 20009902 - 20009958
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||  |||||||||||||| ||||||| ||||||||||||||| |||||||    
T  20009902 tagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 20009958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 18037240 - 18037194
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||    
T  18037240 gctagatatcaacaatgattt-atcaagaaagatttaagaatgacatg 18037194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 15238647 - 15238590
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  15238647 gctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatc 15238590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 15329280 - 15329338
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  15329280 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 37476882 - 37476939
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||| || |||||||    
T  37476882 gctagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatc 37476939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 37477138 - 37477080
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| |||||||| |||||||||||||||| ||||||||||    
T  37477138 gctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 42612074 - 42612017
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||    
T  42612074 gctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatc 42612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 48880985 - 48880927
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  48880985 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 18036990 - 18037043
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||| |||||||| |||||||||||||||| ||||||||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 36790524 - 36790467
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||| ||||||| || | ||||||||||||| |||||||||||||||| |||||||||    
T  36790524 gctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 42696345 - 42696300
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  42696345 tagatatcaataatgattttatcaaaaaaaattcaagaatgacatg 42696300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 24394979 - 24395035
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||    
T  24394979 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 34483099 - 34483044
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  34483099 tagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34483044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 4974537 - 4974594
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| || ||||||| |||||||||||| || |||||||    
T  4974537 gctagatatcaagaatgattttat-aaaaaagattcaagaatgacatggcacaataatc 4974594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 4974793 - 4974735
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  4974793 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 15577649 - 15577706
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||  |||||||||||| || |||||||    
T  15577649 gctagatatcaagaatgattttat-aagaaagatccaagaatgacatgtcacaataatc 15577706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 15577908 - 15577850
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  15577908 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 24395234 - 24395177
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| || ||||||| |||||||||||| || |||||||    
T  24395234 gctagatatcaagaatgattttat-aaaaaagattcaagaatgacatggcacaataatc 24395177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 25167658 - 25167715
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  25167658 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 34482842 - 34482900
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||| ||||||  ||||||||||||||| ||||||||||    
T  34482842 gctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 35445660 - 35445603
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||| |||||| |||||||    
T  35445660 gctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatc 35445603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 42611818 - 42611876
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  42611818 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 45637719 - 45637777
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  45637719 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 45637974 - 45637917
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||| || |||||||    
T  45637974 gctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 45637917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 48880729 - 48880786
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  48880729 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 12614539 - 12614597
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||| || |||||||    
T  12614539 gctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatc 12614597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 3363042 - 3362987
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||    
T  3363042 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataa 3362987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 2477643 - 2477701
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  2477643 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3521809 - 3521866
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  3521809 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 6043314 - 6043371
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  6043314 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 8145636 - 8145579
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||| || |||||||    
T  8145636 gctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 11361189 - 11361131
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  11361189 gctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 12614791 - 12614733
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| ||  |||||||||||||||||| ||||||||||||||| |||||||    
T  12614791 gctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 17545484 - 17545541
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||| ||| ||||||||||||||||||| |||||||    
T  17545484 gctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatc 17545541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 22912859 - 22912916
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| |||||||| ||||||||||||| |||||||||||| || |||||||    
T  22912859 gctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 27482074 - 27482029
Alignment:
Q  328 aatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||    
T  27482074 aatgattttatcaaaaaagattcaagaatgacataacagaataatc 27482029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 2477899 - 2477853
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatg 362  Q
    |||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  2477899 gctagatatcaagaatgattttat-aagaaagatctaagaatgacatg 2477853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 4892209 - 4892267
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||||||    
T  4892209 gctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 4892465 - 4892408
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  4892465 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 14138930 - 14138873
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||| || |||||||    
T  14138930 gctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 14138873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 22913112 - 22913054
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| |||||||| ||| |||||||||||| ||||||||||    
T  22913112 gctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 25398245 - 25398303
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||||||    
T  25398245 gctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 33584131 - 33584188
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  33584131 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 33584387 - 33584329
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||||||    
T  33584387 gctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 37321835 - 37321793
Alignment:
Q  331 gattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||||  ||||||||||||||| ||||||||||    
T  37321835 gattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 8145387 - 8145440
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 373
Target Start/End: Original strand, 31640763 - 31640800
Alignment:
Q  336 tatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  31640763 tatcaagaaagattcaagaatgacatggcagaataatc 31640800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Complemental strand, 12851065 - 12851010
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||    
T  12851065 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 371
Target Start/End: Original strand, 38899527 - 38899583
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataa 371  Q
    |||||||||||| ||||||||||| || ||| ||| |||||||||||| || |||||    
T  38899527 gctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 372
Target Start/End: Complemental strand, 13105 - 13049
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataat 372  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  13105 gctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 11628 - 11686
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  11628 gctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 11882 - 11827
Alignment:
Q  317 tagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||| || |||||||    
T  11882 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 11827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 3075 - 3133
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || ||||||||||| |||  ||||||||||||||| ||||||||||    
T  3075 gctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 31; Significance: 0.00000003; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 16247 - 16190
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  16247 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 26199 - 26142
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||||||    
T  26199 gctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 8414 - 8467
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 15996 - 16049
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 25948 - 26001
Alignment:
Q  320 atatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    ||||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 4403 - 4461
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||||||    
T  4403 gctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 373
Target Start/End: Complemental strand, 4659 - 4602
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| ||| || |||||||    
T  4659 gctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 361
Target Start/End: Complemental strand, 48112 - 48067
Alignment:
Q  315 gctagatatcaataatgattttatcaagaaagatttaagaatgacat 361  Q
    |||||||||||| ||||||||||| |||||||||| |||||||||||    
T  48112 gctagatatcaagaatgattttat-aagaaagattcaagaatgacat 48067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 373
Target Start/End: Original strand, 47863 - 47915
Alignment:
Q  321 tatcaataatgattttatcaagaaagatttaagaatgacatgacagaataatc 373  Q
    |||||| || |||||||||||||||  || |||||||||||| ||||||||||    
T  47863 tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 11512 - 11553
Alignment:
Q  190 attatattaccacaaaccaataagtcctcctccacaaggtgt 231  Q
    |||||||||||||||||||||||||||  | |||||||||||    
T  11512 attatattaccacaaaccaataagtccctccccacaaggtgt 11553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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