View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6329_high_11 (Length: 266)
Name: NF6329_high_11
Description: NF6329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6329_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 35865544 - 35865785
Alignment:
| Q |
9 |
acatcatcaaggataaatgaagcaacattagtcacaatcgtccttgtcaacaagaaccacgatattttcatgtccctacagttgaaagattatgaagnnn |
108 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35865544 |
acataatcaaggataaatgaagcaacattagtcacaatcgtccttgtcaacaagaaccacgatattttcatgtccctacagttgaaagattatgaagaaa |
35865643 |
T |
|
| Q |
109 |
nnnngccacaaactctctctgcaccaatgcaagataataccaaattcagaatagtcaacatgacaatgattgatgatgatcaaatagaaatgttttaact |
208 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35865644 |
aaaagccacaaactctctctgcaccaatgcaagataacaccaaattcagaatagtcaacatgacaatgattgatgatgatcaaatagaaatgttttaact |
35865743 |
T |
|
| Q |
209 |
aaaagtaatagaccgattataatataactcaaatagcattgt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
35865744 |
aaaagtaatagaccgattataatataactcaaatagcattgt |
35865785 |
T |
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