View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6329_high_6 (Length: 333)

Name: NF6329_high_6
Description: NF6329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6329_high_6
NF6329_high_6
[»] chr8 (1 HSPs)
chr8 (13-333)||(7652085-7652405)


Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 13 - 333
Target Start/End: Original strand, 7652085 - 7652405
Alignment:
Q  13 catcaatatcaggaatcaaatccatcaaagcatcatgaagatcaagaatcttaaacaatttctcaggcgacctacgactaatactaatcgcttcagcaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652085 catcaatatcaggaatcaaatccatcaaagcatcatgaagatcaagaatcttaaacaatttctcaggcgacctacgactaatactaatcgcttcagcaaa 7652184  T
Q  113 attaaaaagctgaatagcaggccctttaactgtctccataaaacaagcatcatcaatacaagtcccaatcccatcaaagatttgctcacatagcctcttc 212  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652185 attaaaaagctgaatggcaggccctttaacagtctccataaaacaagcatcatcaatacaagtcccaatcccatcaaagatttgctcacatagcctcttc 7652284  T
Q  213 tcactcgcgaaaagcgtcctaacacaaaccttagccgctcttatccatcgtcttatcttcgtctcaagctgctcccaatccaatctctgaacatcaccaa 312  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652285 tcactggcgaaaagcgtcctaacacaaaccttagcagctcttatccatcgtcttatcttcgtctcaagctgctcccaatccaatctctgaacatcaccaa 7652384  T
Q  313 tactcaacttctcaacaccga 333  Q
    |||||||||||||||||||||    
T  7652385 tactcaacttctcaacaccga 7652405  T

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