View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6329_low_13 (Length: 239)
Name: NF6329_low_13
Description: NF6329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6329_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 25198459 - 25198366
Alignment:
| Q |
131 |
ctatttataaaattgtattttcaataggtccctcattcattgaacacatttcgtatcaagggttttcgaatccctagtcattgagaagcaattg |
224 |
Q |
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| T |
25198459 |
ctatttataaaattgtattttcaataggtccctcattcattgagcacatttcgtatcaagggttttcgaatccctagtcattgagaagcaattg |
25198366 |
T |
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Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25198517 - 25198457
Alignment:
| Q |
1 |
tttggaagttatggtggagtgatactataagaataatcgtactatggtgttgtatattcta |
61 |
Q |
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| T |
25198517 |
tttggaagttatggtggtgtgatactataagaataatcgtactatggtgttgtatattcta |
25198457 |
T |
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