View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6330_low_11 (Length: 243)
Name: NF6330_low_11
Description: NF6330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6330_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45140220 - 45140444
Alignment:
| Q |
1 |
ttacttttctttttggatccaaatttggggaggggtatcgtgtaactgtaatagtttcagcatctttttataaaaataaaatattttaaatttcagaann |
100 |
Q |
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| T |
45140220 |
ttacttttctttttggatccaaatttggggaggggtatcgtgtaactgtaatagtttcagcatctttttataaaaataaaatattttaaatttcagaatt |
45140319 |
T |
|
| Q |
101 |
nnnnncagagttttgaagttaaaggaagatgttgttgctacaaaataatacacgaatcttgcacattgagtatggcgttttctgttgcattttcatagat |
200 |
Q |
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| T |
45140320 |
tttttcagagttttgaagttaaaggaagatgttgttgctacaaaataatacacgaatcttgcacattgagtatggcgttttctgttgcattttcatagat |
45140419 |
T |
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| Q |
201 |
ctacattcacctcatatgaaatccg |
225 |
Q |
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| T |
45140420 |
ctacattcacctcatatgaaatccg |
45140444 |
T |
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